- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running mpace_a ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_a.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x77f6fc229d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x77f6fc229e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.36 s
--------------------------------------------------
ERROR -- flag13 / mc3e
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mc3e.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running mc3e ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mc3e.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x7de0e6c29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x7de0e6c29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.50 s
--------------------------------------------------
ERROR -- flag13 / mpace_b
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running mpace_b ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x70c808e29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x70c808e29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.36 s
--------------------------------------------------
ERROR -- flag13 / mpace_b_silhs
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b_silhs.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running mpace_b_silhs ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b_silhs.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x7affe6a29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x7affe6a29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.37 s
--------------------------------------------------
ERROR -- flag13 / nov11_altocu
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/nov11_altocu.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running nov11_altocu ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/nov11_altocu.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x7791e5c29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x7791e5c29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.34 s
--------------------------------------------------
ERROR -- flag13 / rico
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running rico ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x70b2f1c29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x70b2f1c29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.36 s
--------------------------------------------------
ERROR -- flag13 / rico_silhs
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico_silhs.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running rico_silhs ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico_silhs.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x75a16fe29d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x75a16fe29e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.34 s
--------------------------------------------------
ERROR -- flag13 / wangara
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/wangara.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running wangara ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/wangara.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x738c07829d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x738c07829e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.36 s
--------------------------------------------------
ERROR -- flag13 / twp_ice
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/twp_ice.in
Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13
- using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble
- using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone
=================== Running twp_ice ===================
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
l_Lscale_plume_centered requires l_avg_Lscale
Fatal error in calc_Lscale_directly
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale_directly in calc_Lscale
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Error calling calc_Lscale in advance_clubb_core
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in advance_clubb_core, check your parameter values and timestep
Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/twp_ice.timing
ERROR STOP Fatal error in clubb, check your parameter values and timestep
Error termination. Backtrace:
#0 0x403920 in ???
#1 0x4036de in ???
#2 0x70163d429d8f in __libc_start_call_main
at ../sysdeps/nptl/libc_start_call_main.h:58
#3 0x70163d429e3f in __libc_start_main_impl
at ../csu/libc-start.c:392
#4 0x403704 in ???
#5 0xffffffffffffffff in ???
--------------------------------------------------
run_scm.py total runtime: 0.42 s
--------------------------------------------------
COMPLETE -- flag12 / twp_ice
COMPLETE -- flag14 / bomex
COMPLETE -- flag14 / arm
COMPLETE -- flag14 / cgils_s6
COMPLETE -- flag14 / astex_a209
COMPLETE -- flag14 / atex
COMPLETE -- flag14 / cgils_s11
COMPLETE -- flag14 / cgils_s12
COMPLETE -- flag14 / dycoms2_rf01_fixed_sst
COMPLETE -- flag14 / arm_97
COMPLETE -- flag14 / dycoms2_rf02_nd
COMPLETE -- flag12 / lba
COMPLETE -- flag14 / dycoms2_rf01
COMPLETE -- flag14 / clex9_nov02
COMPLETE -- flag14 / fire
COMPLETE -- flag14 / gabls3_night
COMPLETE -- flag14 / clex9_oct14
COMPLETE -- flag14 / dycoms2_rf02_so
COMPLETE -- flag14 / gabls2
COMPLETE -- flag14 / dycoms2_rf02_do
COMPLETE -- flag14 / jun25_altocu
COMPLETE -- flag14 / dycoms2_rf02_ds
COMPLETE -- flag14 / gabls3
COMPLETE -- flag14 / mpace_a
COMPLETE -- flag14 / mpace_b
COMPLETE -- flag14 / mc3e
COMPLETE -- flag14 / wangara
COMPLETE -- flag14 / mpace_b_silhs
COMPLETE -- flag14 / rico_silhs
COMPLETE -- flag14 / rico
COMPLETE -- flag15 / arm
COMPLETE -- flag14 / nov11_altocu
COMPLETE -- flag15 / bomex
COMPLETE -- flag15 / astex_a209
COMPLETE -- flag15 / atex
COMPLETE -- flag15 / cgils_s6
COMPLETE -- flag15 / cgils_s11
COMPLETE -- flag15 / cgils_s12
COMPLETE -- flag14 / twp_ice
COMPLETE -- flag15 / arm_97
COMPLETE -- flag15 / dycoms2_rf01_fixed_sst
COMPLETE -- flag15 / clex9_nov02
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COMPLETE -- flag15 / mpace_b_silhs
COMPLETE -- flag15 / wangara
COMPLETE -- flag15 / nov11_altocu
COMPLETE -- flag16 / arm
COMPLETE -- flag16 / bomex
COMPLETE -- flag16 / astex_a209
COMPLETE -- flag16 / atex
COMPLETE -- flag16 / cgils_s11
COMPLETE -- flag16 / cgils_s6
COMPLETE -- flag16 / cgils_s12
COMPLETE -- flag15 / twp_ice
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COMPLETE -- flag17 / arm
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COMPLETE -- flag16 / nov11_altocu
COMPLETE -- flag17 / astex_a209
COMPLETE -- flag17 / atex
COMPLETE -- flag17 / cgils_s6
COMPLETE -- flag17 / cgils_s11
COMPLETE -- flag17 / cgils_s12
COMPLETE -- flag16 / twp_ice
COMPLETE -- flag17 / dycoms2_rf01_fixed_sst
COMPLETE -- flag17 / arm_97
COMPLETE -- flag17 / dycoms2_rf02_nd
COMPLETE -- flag17 / clex9_nov02
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COMPLETE -- flag17 / fire
COMPLETE -- flag17 / dycoms2_rf01
COMPLETE -- flag17 / clex9_oct14
COMPLETE -- flag17 / gabls3_night
COMPLETE -- flag17 / gabls2
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COMPLETE -- flag16 / lba
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COMPLETE -- flag17 / gabls3
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COMPLETE -- flag17 / mpace_b_silhs
COMPLETE -- flag17 / rico_silhs
COMPLETE -- flag17 / rico
COMPLETE -- flag17 / wangara
COMPLETE -- flag18 / arm
COMPLETE -- flag17 / nov11_altocu
COMPLETE -- flag18 / astex_a209
COMPLETE -- flag18 / bomex
COMPLETE -- flag18 / atex
COMPLETE -- flag18 / cgils_s11
COMPLETE -- flag18 / cgils_s6
COMPLETE -- flag18 / cgils_s12
COMPLETE -- flag17 / twp_ice
COMPLETE -- flag18 / dycoms2_rf01_fixed_sst
COMPLETE -- flag18 / arm_97
COMPLETE -- flag18 / dycoms2_rf02_nd
COMPLETE -- flag18 / clex9_nov02
COMPLETE -- flag18 / fire
COMPLETE -- flag18 / dycoms2_rf02_so
COMPLETE -- flag18 / dycoms2_rf01
COMPLETE -- flag18 / clex9_oct14
COMPLETE -- flag18 / gabls3_night
COMPLETE -- flag18 / gabls2
COMPLETE -- flag18 / dycoms2_rf02_do
COMPLETE -- flag17 / lba
COMPLETE -- flag18 / jun25_altocu
COMPLETE -- flag18 / dycoms2_rf02_ds
COMPLETE -- flag18 / gabls3
COMPLETE -- flag18 / mpace_a
COMPLETE -- flag18 / mc3e
COMPLETE -- flag18 / mpace_b
COMPLETE -- flag18 / rico_silhs
COMPLETE -- flag18 / rico
COMPLETE -- flag18 / mpace_b_silhs
COMPLETE -- flag18 / wangara
COMPLETE -- flag18 / nov11_altocu
COMPLETE -- flag18 / twp_ice
COMPLETE -- flag18 / lba
=================== Runs Complete ===================
flag11 failures: arm_97
flag13 failures: arm, arm_97, astex_a209, atex, bomex, cgils_s11, cgils_s12, cgils_s6, clex9_nov02, clex9_oct14, dycoms2_rf01, dycoms2_rf01_fixed_sst, dycoms2_rf02_do, dycoms2_rf02_ds, dycoms2_rf02_nd, dycoms2_rf02_so, fire, gabls2, gabls3, gabls3_night, jun25_altocu, lba, mc3e, mpace_a, mpace_b, mpace_b_silhs, nov11_altocu, rico, rico_silhs, twp_ice, wangara
Some CLUBB runs failed. See messages above.
Cloning into '/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb'...
Note: switching to 'origin/readiopdata_merge2'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at b306d548f Changes to prepare for merge into master
-- The Fortran compiler identification is GNU 13.1.0
-- The C compiler identification is GNU 13.1.0
-- The CXX compiler identification is GNU 13.1.0
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Compiling with double precision
-- Performing Test NETCDF_ABI_COMPATIBLE
-- Performing Test NETCDF_ABI_COMPATIBLE - Success
-- SUCCESS: netcdf-fortran found.
-- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so
-- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble
Using inferred toolchain file: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/cmake/toolchains/linux_x86_64_gcc.cmake
Setting CLUBB installation dir: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble
Setting CLUBB installation dir: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/install/gcc_PRECdouble
about to cmnake /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble
Running CMake configure...
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[616/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/array_index.F90.o
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[618/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/endian.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:167:53:
167 | call mvbits( i_element, 56, 8, i_element_br, 0 )
| ^
Warning: 'i_element_br' is used uninitialized [-Wuninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:159:39:
159 | integer(kind=int64) :: i_element_br
| ^
note: 'i_element_br' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:123:53:
123 | CALL MVBITS( i_element, 24, 8, i_element_br, 0 )
| ^
Warning: 'i_element_br' is used uninitialized [-Wuninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:117:69:
117 | INTEGER(KIND=int32) :: i_element_br
| ^
note: 'i_element_br' declared here
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[627/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/model_flags.F90.o
[628/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/tridiag_lu_solver.F90.o
[629/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o
[630/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mean_adv.F90.o
[631/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/hydromet_pdf_parameter_module.F90.o
[632/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/err_info_type_module.F90.o
[633/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_tsdadg_pdf.F90.o
[634/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_lu_solver.F90.o
[635/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diagnose_correlations_module.F90.o
[636/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Skx_module.F90.o
[637/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/interpolation.F90.o
[638/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o
[639/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_operations.F90.o
[640/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_bicgstab_solver.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/penta_bicgstab_solver.F90:140:10:
140 | if ( norm_rhs == 0.0) then
| 1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
[641/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/corr_varnce_module.F90.o
[642/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf.F90.o
[643/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/adg1_adg2_3d_luhar_pdf.F90.o
[644/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/index_mapping.F90.o
[645/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o
[646/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_class.F90.o
[647/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_solver_wrapper.F90.o
[648/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o
[649/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o
[650/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o
[651/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o
[652/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o
[653/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o
[654/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o
[655/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:1210:43:
1210 | if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then
| 1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:1104:15:
1104 | if(dm(i) == zero) then
| 1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:185:71:
185 | *( val_below + lin_spline_rho_vals(l) )/2
| ^
Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:129:17:
129 | level_below, & ! The altitude of the level or spline connection point below [m]
| ^
note: 'level_below' was declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:185:71:
185 | *( val_below + lin_spline_rho_vals(l) )/2
| ^
Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:128:15:
128 | val_below, & ! The rho value of the level or spline connection point below [kg/m^3]
| ^
note: 'val_below' was declared here
[656/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/parameters_tunable.F90:1822:30:
1822 | subroutine unpack_parameters &
| ^
Warning: 'unpack_parameters' defined but not used [-Wunused-function]
[657/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o
[658/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o
[659/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf_main.F90.o
[660/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o
[661/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o
[662/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o
[663/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mono_flux_limiter.F90.o
[664/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o
[665/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o
[666/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/fill_holes.F90.o
[667/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o
[668/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o
[669/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o
[670/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/mixing_length.F90:1096:16:
1096 | if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= &
| ^
Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/mixing_length.F90:730:42:
730 | real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1
| ^
note: 'dcape_dz_j' was declared here
[671/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o
[672/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o
[673/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o
[674/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o
[675/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/advance_wp2_wp3_module.F90:1918:12:
1918 | if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then
| ^
Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20:
1470 | wp2_avg_before, &
| ^
note: 'wp2_avg_before' was declared here
[676/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o
[677/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o
[678/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o
[679/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o
[680/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o
[681/927] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a
[682/927] Generating Fortran dyndep file src/CMakeFiles/text_writer_lib.dir/Fortran.dd
[683/927] Generating Fortran dyndep file src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/Fortran.dd
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[685/927] Generating Fortran dyndep file src/Microphys/Microphys_utils/CMakeFiles/microphys_utils_lib.dir/Fortran.dd
[686/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/kinds.F90.o
[687/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19.F.o
[688/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa15.F.o
[689/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21.F.o
[690/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22.F.o
[691/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa20g.F.o
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[695/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18g.F.o
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[697/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa27.F.o
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[701/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12g.F.o
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[703/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa11g.F.o
[704/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa13g.F.o
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[709/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7.F.o
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[784/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o
[785/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o
[786/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o
[787/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/SILHS/silhs_importance_sample_module.F90:638:62:
633 | do category=1, num_importance_categories
| 2
......
638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then
| 1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
[788/927] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o
[789/927] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a
[790/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/SILHS/latin_hypercube_driver_module.F90:1595:10:
1595 | if ( X_u_chi(sample) < (one - cloud_frac_i) ) then
| ^
Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/SILHS/latin_hypercube_driver_module.F90:1577:18:
1577 | cloud_frac_i
| ^
note: 'cloud_frac_i' was declared here
[791/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o
[792/927] Linking Fortran static library src/SILHS/libsilhs_lib.a
[793/927] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd
[794/927] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd
[795/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o
[796/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o
[797/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o
[798/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o
[799/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o
[800/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o
[801/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o
[802/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o
[803/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o
[804/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o
[805/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o
[806/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
[807/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o
[808/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o
[809/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/Numerical_recipes/ran_state.f90:8:59:
8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1
| 1
Warning: Integer outside symmetric range implied by Standard Fortran at (1)
[810/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[811/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[812/927] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a
[813/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o
[814/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[815/927] Linking Fortran static library src/Radiation/libradiation_lib.a
[816/927] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd
[817/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o
[818/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o
[819/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o
[820/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
[821/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o
[822/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/Input_fields/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[823/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[824/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[825/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[826/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1468:21:
1468 | if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1
| 1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1490:18:
1490 | if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1
| 1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1036:15:
1036 | if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1038:15:
1038 | if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1040:15:
1040 | if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1043:15:
1043 | if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1045:15:
1045 | if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1047:15:
1047 | if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:354:13:
354 | if( ANY(Ts_in == 0.0) ) then
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:618:12:
618 | if(T_in(i,nlev+1)/=missing_value) then
| 1
Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:634:12:
634 | if(T_in(i,nlev+1)==missing_value) &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:636:12:
636 | if(q_in(i,nlev+1)==missing_value) &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:638:12:
638 | if(u_in(i,nlev+1)==missing_value) &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:640:12:
640 | if(v_in(i,nlev+1)==missing_value) &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:645:15:
645 | if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:649:15:
649 | if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:656:12:
656 | if(ug_in(i,nlev+1)==missing_value) &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:658:12:
658 | if(vg_in(i,nlev+1)==missing_value) &
| 1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1250:42:
1250 | character dim_name*( NF90_MAX_NAME )
| 1
Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1252:33:
1252 | integer var_ndims, dim_size, dims_set, i, n, var_type
| 1
Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1252:43:
1252 | integer var_ndims, dim_size, dims_set, i, n, var_type
| 1
Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1252:46:
1252 | integer var_ndims, dim_size, dims_set, i, n, var_type
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1235:60:
1235 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
| 1
Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1235:54:
1235 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
| 1
Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1236:23:
1236 | var, use_NF90_REAL, status, required)
| 1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1165:67:
1165 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, &
| 1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:749:51:
749 | get_add_surface_data, ntime, &
| 1
Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:748:81:
748 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, &
| 1
Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:294:32:
294 | integer :: STATUS, i, n, nlat, nlon
| 1
Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:294:38:
294 | integer :: STATUS, i, n, nlat, nlon
| 1
Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:295:19:
295 | integer :: varID, NCID
| 1
Warning: Unused variable 'varid' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:784:28:
784 | shf_in(:) = missing_value
| ^
Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:34:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'shf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:784:28:
784 | shf_in(:) = missing_value
| ^
Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:34:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'shf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:784:28:
784 | shf_in(:) = missing_value
| ^
Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:34:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'shf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28:
785 | lhf_in(:) = missing_value
| ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'lhf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28:
785 | lhf_in(:) = missing_value
| ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'lhf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28:
785 | lhf_in(:) = missing_value
| ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'lhf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28:
785 | lhf_in(:) = missing_value
| ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'lhf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28:
785 | lhf_in(:) = missing_value
| ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'lhf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28:
785 | lhf_in(:) = missing_value
| ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'lhf_in' declared here
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:786:31:
786 | tausrf_in(:) = missing_value
| ^
Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:59:
759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
| ^
note: 'tausrf_in.dim[0].ubound' was declared here
[827/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o
FAILED: src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o MOD/readiopdata_module.mod
/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran -I/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src -I/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble/MOD -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -mieee-fp -fall-intrinsics -std=gnu -fallow-argument-mismatch -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -pedantic -O2 -march=native -msse3 -mfpmath=sse -JMOD -fPIC -fpreprocessed -c src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90-pp.f90 -o src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o
/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_module.F90:244:9:
244 | use spec_hum_to_mixing_ratio, only: &
| 1
Fatal Error: Cannot open module file 'spec_hum_to_mixing_ratio.mod' for reading at (1): No such file or directory
compilation terminated.
[828/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
ninja: build stopped: subcommand failed.
[91mBuild failed. See /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble/cmake_build_output.txt for details.[0m
Cloning master into /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb...
Running: git clone https://github.com/larson-group/clubb.git /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb
Running: git checkout master (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb)
Compiling CLUBB for master...
Running: /usr/bin/python3 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/compile.py (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb)
Running varying-flag cases for master...
Run phase for master exited with code 1; continuing to output comparison.
Cloning origin/readiopdata_merge2 into /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb...
Running: git clone https://github.com/larson-group/clubb.git /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb
Running: git checkout origin/readiopdata_merge2 (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb)
Compiling CLUBB for origin/readiopdata_merge2...
Running: /usr/bin/python3 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/compile.py (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb)
Command failed for origin/readiopdata_merge2 with exit code 1.
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE
