Started by user Trevor Hancock Checking out git https://github.com/larson-group/clubb.git into /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 to read jenkins_tests/run_bindiff_w_varying_flags_against_master/Jenkinsfile The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' using GIT_ASKPASS to set credentials larsongroupsysadmin github token > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/readiopdata_merge2^{commit} # timeout=10 Checking out Revision b306d548f049545faa093ce2505b1d063f5b22ba (refs/remotes/origin/readiopdata_merge2) > git config core.sparsecheckout # timeout=10 > git checkout -f b306d548f049545faa093ce2505b1d063f5b22ba # timeout=10 Commit message: "Changes to prepare for merge into master" First time build. Skipping changelog. [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' using GIT_ASKPASS to set credentials larsongroupsysadmin github token > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/readiopdata_merge2^{commit} # timeout=10 Checking out Revision b306d548f049545faa093ce2505b1d063f5b22ba (refs/remotes/origin/readiopdata_merge2) > git config core.sparsecheckout # timeout=10 > git checkout -f b306d548f049545faa093ce2505b1d063f5b22ba # timeout=10 Commit message: "Changes to prepare for merge into master" [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Bindiff Varying Flags Against Master) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + TEST_BRANCH=origin/readiopdata_merge2 + TEST_BRANCH=origin/readiopdata_merge2 + python3 tests/run_bindiff_w_flags.py --overwrite-existing -b master,origin/readiopdata_merge2 -d /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master -f input/flag_sets/run_bindiff_w_flags_config_core_flags.json -max_iters 360 Cloning into '/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb'... Already on 'master' Your branch is up to date with 'origin/master'. -- The Fortran compiler identification is GNU 13.1.0 -- The C compiler identification is GNU 13.1.0 -- The CXX compiler identification is GNU 13.1.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran - skipped -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiling with double precision -- Performing Test NETCDF_ABI_COMPATIBLE -- Performing Test NETCDF_ABI_COMPATIBLE - Success -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/build/gcc_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/build/gcc_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble about to cmnake /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/build/gcc_PRECdouble Running CMake configure... 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Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iparmq.f.o [594/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlarfb.f.o [595/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtrf.f.o [596/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsymv.f.o [597/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsytrd.f.o [598/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlantb.f.o [599/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlasr.f.o [600/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsterf.f.o [601/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlatbs.f.o [602/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsyrk.f.o [603/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmv.f.o [604/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ilaenv.f.o [605/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsyr2k.f.o [606/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtbsv.f.o [607/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsteqr.f.o [608/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmm.f.o [609/923] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrsm.f.o [610/923] Linking Fortran static library src/Lapack/liblapack_lib.a [611/923] Generating Fortran dyndep file src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Fortran.dd [612/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_precision.F90.o [613/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameter_indices.F90.o [614/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/error_code.F90.o [615/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/array_index.F90.o [616/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/endian.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/endian.F90:167:53: 167 | call mvbits( i_element, 56, 8, i_element_br, 0 ) | ^ Warning: 'i_element_br' is used uninitialized [-Wuninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/endian.F90:159:39: 159 | integer(kind=int64) :: i_element_br | ^ note: 'i_element_br' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/endian.F90:123:53: 123 | CALL MVBITS( i_element, 24, 8, i_element_br, 0 ) | ^ Warning: 'i_element_br' is used uninitialized [-Wuninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/endian.F90:117:69: 117 | INTEGER(KIND=int32) :: i_element_br | ^ note: 'i_element_br' declared here [617/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/constants_clubb.F90.o [618/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_interfaces.F90.o [619/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calendar.F90.o [620/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Nc_Ncn_eqns.F90.o [621/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf.F90.o [622/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/T_in_K_module.F90.o [623/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/LY93_pdf.F90.o [624/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/tridiag_lu_solver.F90.o [625/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o [626/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/model_flags.F90.o [627/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/file_functions.F90.o [628/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/hydromet_pdf_parameter_module.F90.o [629/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_tsdadg_pdf.F90.o [630/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mean_adv.F90.o [631/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_lu_solver.F90.o [632/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/err_info_type_module.F90.o [633/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diagnose_correlations_module.F90.o [634/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_operations.F90.o [635/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Skx_module.F90.o [636/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o [637/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/interpolation.F90.o [638/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_bicgstab_solver.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/penta_bicgstab_solver.F90:140:10: 140 | if ( norm_rhs == 0.0) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [639/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/corr_varnce_module.F90.o [640/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/index_mapping.F90.o [641/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf.F90.o [642/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/adg1_adg2_3d_luhar_pdf.F90.o [643/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o [644/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_class.F90.o [645/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o [646/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o [647/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o [648/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_solver_wrapper.F90.o [649/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o [650/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o [651/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o [652/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o [653/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/remapping_module.F90:1210:43: 1210 | if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/remapping_module.F90:1104:15: 1104 | if(dm(i) == zero) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/remapping_module.F90:185:71: 185 | *( val_below + lin_spline_rho_vals(l) )/2 | ^ Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/remapping_module.F90:129:17: 129 | level_below, & ! The altitude of the level or spline connection point below [m] | ^ note: 'level_below' was declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/remapping_module.F90:185:71: 185 | *( val_below + lin_spline_rho_vals(l) )/2 | ^ Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/remapping_module.F90:128:15: 128 | val_below, & ! The rho value of the level or spline connection point below [kg/m^3] | ^ note: 'val_below' was declared here [654/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/parameters_tunable.F90:1822:30: 1822 | subroutine unpack_parameters & | ^ Warning: 'unpack_parameters' defined but not used [-Wunused-function] [655/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o [656/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o [657/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf_main.F90.o [658/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o [659/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o [660/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o [661/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mono_flux_limiter.F90.o [662/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o [663/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o [664/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/fill_holes.F90.o [665/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o [666/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o [667/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o [668/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/mixing_length.F90:1096:16: 1096 | if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= & | ^ Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/mixing_length.F90:730:42: 730 | real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1 | ^ note: 'dcape_dz_j' was declared here [669/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o [670/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o [671/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o [672/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o [673/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/advance_wp2_wp3_module.F90:1927:12: 1927 | if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then | ^ Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20: 1470 | wp2_avg_before, & | ^ note: 'wp2_avg_before' was declared here [674/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o [675/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o [676/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o [677/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o [678/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o [679/923] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a [680/923] Generating Fortran dyndep file src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/Fortran.dd [681/923] Generating Fortran dyndep file src/CMakeFiles/text_writer_lib.dir/Fortran.dd [682/923] Generating Fortran dyndep file src/Microphys/Microphys_utils/CMakeFiles/microphys_utils_lib.dir/Fortran.dd [683/923] Generating Fortran dyndep file src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/Fortran.dd [684/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/kinds.F90.o [685/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21g.F.o [686/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19.F.o [687/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa20g.F.o [688/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22g.F.o [689/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa27.F.o [690/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18g.F.o [691/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21.F.o [692/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22.F.o [693/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa15.F.o [694/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa28.F.o [695/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa25.F.o [696/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa26.F.o [697/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa11g.F.o [698/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12g.F.o [699/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa27r.F.o [700/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa14g.F.o [701/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19g.F.o [702/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa13g.F.o [703/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18.F.o [704/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa10g.F.o [705/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_physconst.F90.o [706/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa5g.F.o [707/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7g.F.o [708/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa6.F.o [709/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa17g.F.o [710/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7.F.o [711/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/newexp.F90.o [712/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp2.F.o [713/923] Building Fortran object src/CMakeFiles/text_writer_lib.dir/text_writer.F90.o [714/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/rayle.F.o [715/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esati.F.o [716/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esatv.F.o [717/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp1.F.o [718/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/gamma.F.o [719/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjmlt.F.o [720/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_planck.F90.o [721/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa9g.F.o [722/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/frzh.F.o [723/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa8g.F.o [724/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12.F.o [725/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_sel.F.o [726/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esat_new.F.o [727/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa9.F.o [728/923] Building Fortran object src/Microphys/Microphys_utils/CMakeFiles/microphys_utils_lib.dir/microphys_stats_vars_module.F90.o [729/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/gascon.F.o [730/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qsatvi.F.o [731/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqg.F.o [732/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqs.F.o [733/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qtadj.F.o [734/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqi.F.o [735/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqi.F.o [736/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqr.F.o [737/923] Linking Fortran static library src/libtext_writer_lib.a [738/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/slope.F.o [739/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/conice.F.o [740/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloudg.F.o [741/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmcol.F.o [742/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqw.F.o [743/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw.F.o [744/923] Linking Fortran static library src/Microphys/Microphys_utils/libmicrophys_utils_lib.a [745/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw.F.o [746/923] Generating Fortran dyndep file src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Fortran.dd [747/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloud_correlate.F90.o [748/923] Generating Fortran dyndep file src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/Fortran.dd [749/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_ocastrndm.F90.o [750/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/parameters_KK.F90.o [751/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic_constants.f90.o [752/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_iter.F.o [753/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_local_means.F90.o [754/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_bs.F.o [755/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_iter.F.o [756/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_ocastrndm.F90.o [757/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/AiryFunction.f90.o [758/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/gases_ckd.F90.o [759/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjtq.F.o [760/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_rad.F.o [761/923] Linking Fortran static library src/Microphys/COAMPS_microphys/libcoamps_lib.a [762/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_lwr.F.o [763/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_swr.F.o [764/923] Linking Fortran static library src/Radiation/BUGSrad/libbugsrad_lib.a [765/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic.f90.o [766/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_utilities.F90.o [767/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_means.F90.o [768/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_all_MM.F90.o [769/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_covar.F90.o [770/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_means.F90.o [771/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_variances.F90.o [772/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_Nrm_tendencies.F90.o [773/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_turbulent_sed.F90.o [774/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_covariances.F90.o [775/923] Linking Fortran static library src/Microphys/KK_microphys/libKK_microphys_lib.a [776/923] Generating Fortran dyndep file src/SILHS/CMakeFiles/silhs_lib.dir/Fortran.dd [777/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_arrays.F90.o [778/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/parameters_silhs.F90.o [779/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/est_kessler_microphys_module.F90.o [780/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/transform_to_pdf_module.F90.o [781/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/mt95.F90.o [782/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o [783/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o [784/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o [785/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/SILHS/silhs_importance_sample_module.F90:638:62: 633 | do category=1, num_importance_categories | 2 ...... 638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] [786/923] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o [787/923] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a [788/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/SILHS/latin_hypercube_driver_module.F90:1595:10: 1595 | if ( X_u_chi(sample) < (one - cloud_frac_i) ) then | ^ Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/SILHS/latin_hypercube_driver_module.F90:1577:18: 1577 | cloud_frac_i | ^ note: 'cloud_frac_i' was declared here [789/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o [790/923] Linking Fortran static library src/SILHS/libsilhs_lib.a [791/923] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd [792/923] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd [793/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o [794/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o [795/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o [796/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o [797/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o [798/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o [799/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o [800/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o [801/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o [802/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o [803/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o [804/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o [805/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o [806/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o [807/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Numerical_recipes/ran_state.f90:8:59: 8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1 | 1 Warning: Integer outside symmetric range implied by Standard Fortran at (1) [808/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o [809/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o [810/923] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a [811/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o [812/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o [813/923] Linking Fortran static library src/Radiation/libradiation_lib.a [814/923] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd [815/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o [816/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o [817/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o [818/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o [819/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o [820/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [821/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o [822/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o [823/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o [824/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:156:13: 156 | p_in_Pa, & ! Pressure [Pa] | 1 Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:151:8: 151 | rt, & ! Total water mixing ratio sounding [kg/kg] | 1 Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:157:10: 157 | subs ! Vertical velocity sounding [m/s or Pa/s] | 1 Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:150:11: 150 | theta, & ! Liquid potential temperature sounding [K] | 1 Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:152:7: 152 | u, & ! u wind sounding [m/s] | 1 Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:154:8: 154 | ug, & ! u geostrophic wind sounding [m/s] | 1 Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:153:7: 153 | v, & ! v wind sounding [m/s] | 1 Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:155:8: 155 | vg, & ! v geostrophic wind sounding [m/s] | 1 Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Input_fields/sounding.F90:149:7: 149 | z, & ! Altitude [m] | 1 Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] [825/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o [826/923] Linking Fortran static library src/Input_fields/libinput_fields_lib.a [827/923] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd [828/923] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd [829/923] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd [830/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o [831/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o [832/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o [833/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o [834/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Microphys/ice_dfsn_module.F90:272:25: 207 | do k = gr%nzt, 1, -1 | 2 ...... 272 | mass_ice_cryst(k-1) = mass_ice_cryst(k) & | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Microphys/ice_dfsn_module.F90:287:25: 207 | do k = gr%nzt, 1, -1 | 2 ...... 287 | mass_ice_cryst(k-1) = mass_ice_cryst(k) | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [835/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/Microphys/cloud_sed_module.F90:166:49: 166 | if ( zt2zm_api( gr, rcm, k ) > zero .AND. zt2zm_api( gr, Ncm, k ) > zero ) then | 1 Warning: Impure function 'redirect_interpolated_azm_k' at (1) might not be evaluated [-Wfunction-elimination] [836/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o [837/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o [838/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o [839/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o [840/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o [841/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o [842/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o [843/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o [844/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o [845/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o [846/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o [847/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o [848/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o [849/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/fill_holes_tests.F90:407:27: 407 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/fill_holes_tests.F90:406:22: 406 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/fill_holes_tests.F90:462:22: 462 | if ( any( field_rev_rev /= field ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/fill_holes_tests.F90:221:27: 221 | .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/fill_holes_tests.F90:220:22: 220 | if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/fill_holes_tests.F90:275:22: 275 | if ( any( field_rev_rev /= field ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [850/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/mu_sigma_hm_tests.F90:511:17: 511 | if ( any( .not. l_pass_test_3 ) ) then | ^ Warning: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/G_unit_test_types/mu_sigma_hm_tests.F90:137:19: 137 | l_pass_test_3, & ! Flag for passing test 3 | ^ note: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' was declared here [851/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o [852/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o [853/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o [854/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o [855/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o [856/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o [857/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o [858/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o [859/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o [860/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o [861/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o [862/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o [863/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o [864/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o [865/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o [866/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o [867/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o [868/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o [869/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o [870/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o [871/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o [872/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o [873/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o [874/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o [875/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o [876/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o [877/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o [878/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o [879/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o [880/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o [881/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o [882/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o [883/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o [884/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o [885/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o [886/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o [887/923] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a [888/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o [889/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o [890/923] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a [891/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o [892/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o [893/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o [894/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o [895/923] Linking Fortran static library src/Microphys/libmicrophys_lib.a [896/923] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd [897/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd [898/923] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o [899/923] Linking Fortran executable src/G_unit_tests [900/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o [901/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o [902/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver.F90:255:28: 255 | is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) ) | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [903/923] Linking Fortran static library src/libclubb_driver_lib.a [904/923] Generating Fortran dyndep file src/CMakeFiles/clubb_tuner.dir/Fortran.dd [905/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone.dir/Fortran.dd [906/923] Generating Fortran dyndep file src/CMakeFiles/clubb_thread_test.dir/Fortran.dd [907/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_test.dir/Fortran.dd [908/923] Generating Fortran dyndep file src/CMakeFiles/clubb_loss_driver_test.dir/Fortran.dd [909/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone_loss.dir/Fortran.dd [910/923] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o [911/923] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o [912/923] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o [913/923] Building Fortran object src/CMakeFiles/clubb_standalone_loss.dir/clubb_standalone_loss.F90.o [914/923] Linking Fortran executable src/clubb_thread_test [915/923] Linking Fortran executable src/clubb_standalone [916/923] Linking Fortran executable src/clubb_driver_test [917/923] Linking Fortran executable src/clubb_standalone_loss [918/923] Building Fortran object src/CMakeFiles/clubb_loss_driver_test.dir/clubb_loss_driver_test.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:273:14: 273 | if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:278:14: 278 | if ( any( test_correlation /= reference_correlation ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:283:14: 283 | if ( any( test_std_ratio /= reference_std_ratio ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:288:14: 288 | if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:293:14: 293 | if ( any( test_bias_norm /= reference_bias_norm ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:512:14: 512 | if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:521:14: 521 | any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:520:14: 520 | any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:519:14: 519 | any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:518:14: 518 | any( reinit_correlation_1 /= reinit_correlation_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:517:14: 517 | if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:431:14: 431 | if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:371:14: 371 | any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:370:14: 370 | any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:369:14: 369 | any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:368:14: 368 | any( manual_correlation_2 /= manual_correlation_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/src/clubb_loss_driver_test.F90:367:14: 367 | if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. & | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] [919/923] Linking Fortran executable src/clubb_loss_driver_test [920/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o [921/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o [922/923] Linking Fortran executable src/clubb_tuner [922/923] Install the project... -- Install configuration: "Release" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_standalone_loss -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" -- Installing: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_loss_driver_test -- Set runtime path of "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib:/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m Reading settings from /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/input/flag_sets/run_bindiff_w_flags_config_core_flags.json... Running 589 run_scm.py task(s) with up to 8 worker(s)... COMPLETE -- default / cgils_s12 COMPLETE -- default / cgils_s11 COMPLETE -- default / bomex COMPLETE -- default / cgils_s6 COMPLETE -- default / arm COMPLETE -- default / astex_a209 COMPLETE -- default / atex COMPLETE -- default / dycoms2_rf01_fixed_sst COMPLETE -- default / dycoms2_rf02_nd COMPLETE -- default / arm_97 COMPLETE -- default / dycoms2_rf02_so COMPLETE -- default / fire COMPLETE -- default / clex9_nov02 COMPLETE -- default / dycoms2_rf01 COMPLETE -- default / gabls3_night COMPLETE -- default / clex9_oct14 COMPLETE -- default / gabls2 COMPLETE -- default / dycoms2_rf02_do COMPLETE -- default / dycoms2_rf02_ds COMPLETE -- default / jun25_altocu COMPLETE -- default / gabls3 COMPLETE -- default / mpace_a COMPLETE -- default / mpace_b COMPLETE -- default / mc3e COMPLETE -- default / mpace_b_silhs COMPLETE -- default / wangara COMPLETE -- default / rico_silhs COMPLETE -- default / rico COMPLETE -- flag1 / arm COMPLETE -- flag1 / bomex COMPLETE -- default / nov11_altocu COMPLETE -- flag1 / astex_a209 COMPLETE -- flag1 / atex COMPLETE -- flag1 / cgils_s6 COMPLETE -- flag1 / cgils_s12 COMPLETE -- flag1 / cgils_s11 COMPLETE -- default / twp_ice COMPLETE -- flag1 / dycoms2_rf01_fixed_sst COMPLETE -- flag1 / arm_97 COMPLETE -- flag1 / clex9_nov02 COMPLETE -- flag1 / dycoms2_rf02_nd COMPLETE -- flag1 / dycoms2_rf01 COMPLETE -- flag1 / dycoms2_rf02_so COMPLETE -- flag1 / fire COMPLETE -- flag1 / clex9_oct14 COMPLETE -- flag1 / gabls3_night COMPLETE -- flag1 / gabls2 COMPLETE -- flag1 / dycoms2_rf02_do COMPLETE -- flag1 / dycoms2_rf02_ds COMPLETE -- default / lba COMPLETE -- flag1 / jun25_altocu COMPLETE -- flag1 / gabls3 COMPLETE -- flag1 / mpace_a COMPLETE -- flag1 / mc3e COMPLETE -- flag1 / mpace_b COMPLETE -- flag1 / mpace_b_silhs COMPLETE -- flag1 / rico COMPLETE -- flag1 / rico_silhs COMPLETE -- flag1 / wangara COMPLETE -- flag1 / nov11_altocu COMPLETE -- flag2 / arm COMPLETE -- flag2 / bomex COMPLETE -- flag2 / astex_a209 COMPLETE -- flag2 / atex COMPLETE -- flag2 / cgils_s11 COMPLETE -- flag2 / cgils_s6 COMPLETE -- flag2 / cgils_s12 COMPLETE -- flag1 / twp_ice COMPLETE -- flag2 / dycoms2_rf01_fixed_sst COMPLETE -- flag2 / arm_97 COMPLETE -- flag2 / dycoms2_rf02_nd COMPLETE -- flag2 / clex9_nov02 COMPLETE -- flag2 / fire COMPLETE -- flag2 / dycoms2_rf01 COMPLETE -- flag2 / dycoms2_rf02_so COMPLETE -- flag2 / gabls3_night COMPLETE -- flag2 / clex9_oct14 COMPLETE -- flag2 / gabls2 COMPLETE -- flag2 / dycoms2_rf02_do COMPLETE -- flag1 / lba COMPLETE -- flag2 / jun25_altocu COMPLETE -- flag2 / dycoms2_rf02_ds COMPLETE -- flag2 / gabls3 COMPLETE -- flag2 / mpace_a COMPLETE -- flag2 / mc3e COMPLETE -- flag2 / mpace_b COMPLETE -- flag2 / rico_silhs COMPLETE -- flag2 / rico COMPLETE -- flag2 / mpace_b_silhs COMPLETE -- flag2 / wangara COMPLETE -- flag3 / arm COMPLETE -- flag2 / nov11_altocu COMPLETE -- flag3 / bomex COMPLETE -- flag3 / astex_a209 COMPLETE -- flag3 / atex COMPLETE -- flag3 / cgils_s6 COMPLETE -- flag3 / cgils_s11 COMPLETE -- flag3 / cgils_s12 COMPLETE -- flag2 / twp_ice COMPLETE -- flag3 / dycoms2_rf01_fixed_sst COMPLETE -- flag3 / arm_97 COMPLETE -- flag3 / dycoms2_rf02_nd COMPLETE -- flag3 / clex9_nov02 COMPLETE -- flag3 / fire COMPLETE -- flag3 / dycoms2_rf02_so COMPLETE -- flag3 / dycoms2_rf01 COMPLETE -- flag3 / clex9_oct14 COMPLETE -- flag3 / gabls3_night COMPLETE -- flag3 / gabls2 COMPLETE -- flag2 / lba COMPLETE -- flag3 / dycoms2_rf02_do COMPLETE -- flag3 / dycoms2_rf02_ds COMPLETE -- flag3 / jun25_altocu COMPLETE -- flag3 / gabls3 COMPLETE -- flag3 / mpace_a COMPLETE -- flag3 / mc3e COMPLETE -- flag3 / mpace_b COMPLETE -- flag3 / rico_silhs COMPLETE -- flag3 / rico COMPLETE -- flag3 / mpace_b_silhs COMPLETE -- flag3 / wangara COMPLETE -- flag3 / nov11_altocu COMPLETE -- flag4 / arm COMPLETE -- flag4 / astex_a209 COMPLETE -- flag4 / bomex COMPLETE -- flag4 / atex COMPLETE -- flag4 / cgils_s11 COMPLETE -- flag4 / cgils_s6 COMPLETE -- flag4 / cgils_s12 COMPLETE -- flag3 / twp_ice COMPLETE -- flag4 / dycoms2_rf01_fixed_sst COMPLETE -- flag4 / arm_97 COMPLETE -- flag4 / dycoms2_rf02_nd COMPLETE -- flag4 / clex9_nov02 COMPLETE -- flag4 / dycoms2_rf02_so COMPLETE -- flag4 / dycoms2_rf01 COMPLETE -- flag4 / fire COMPLETE -- flag4 / clex9_oct14 COMPLETE -- flag3 / lba COMPLETE -- flag4 / gabls3_night COMPLETE -- flag4 / gabls2 COMPLETE -- flag4 / dycoms2_rf02_do COMPLETE -- flag4 / dycoms2_rf02_ds COMPLETE -- flag4 / jun25_altocu COMPLETE -- flag4 / mpace_a COMPLETE -- flag4 / gabls3 COMPLETE -- flag4 / mpace_b COMPLETE -- flag4 / mc3e COMPLETE -- flag4 / mpace_b_silhs COMPLETE -- flag4 / wangara COMPLETE -- flag4 / rico COMPLETE -- flag4 / rico_silhs COMPLETE -- flag4 / nov11_altocu COMPLETE -- flag5 / arm COMPLETE -- flag5 / bomex COMPLETE -- flag5 / astex_a209 COMPLETE -- flag5 / atex COMPLETE -- flag5 / cgils_s11 COMPLETE -- flag5 / cgils_s6 COMPLETE -- flag5 / cgils_s12 COMPLETE -- flag4 / twp_ice COMPLETE -- flag5 / dycoms2_rf01_fixed_sst COMPLETE -- flag5 / arm_97 COMPLETE -- flag5 / dycoms2_rf02_nd COMPLETE -- flag5 / clex9_nov02 COMPLETE -- flag5 / dycoms2_rf02_so COMPLETE -- flag5 / dycoms2_rf01 COMPLETE -- flag5 / fire COMPLETE -- flag5 / clex9_oct14 COMPLETE -- flag5 / gabls3_night COMPLETE -- flag5 / gabls2 COMPLETE -- flag5 / dycoms2_rf02_do COMPLETE -- flag5 / jun25_altocu COMPLETE -- flag5 / dycoms2_rf02_ds COMPLETE -- flag4 / lba COMPLETE -- flag5 / gabls3 COMPLETE -- flag5 / mpace_a COMPLETE -- flag5 / mc3e COMPLETE -- flag5 / mpace_b COMPLETE -- flag5 / rico_silhs COMPLETE -- flag5 / mpace_b_silhs COMPLETE -- flag5 / rico COMPLETE -- flag5 / wangara COMPLETE -- flag5 / nov11_altocu COMPLETE -- flag6 / astex_a209 COMPLETE -- flag6 / bomex COMPLETE -- flag6 / arm COMPLETE -- flag6 / cgils_s6 COMPLETE -- flag6 / atex COMPLETE -- flag5 / twp_ice COMPLETE -- flag6 / cgils_s11 COMPLETE -- flag6 / cgils_s12 COMPLETE -- flag6 / dycoms2_rf01_fixed_sst COMPLETE -- flag6 / dycoms2_rf02_nd COMPLETE -- flag6 / clex9_nov02 COMPLETE -- flag6 / fire COMPLETE -- flag6 / arm_97 COMPLETE -- flag6 / dycoms2_rf02_so COMPLETE -- flag5 / lba COMPLETE -- flag6 / clex9_oct14 COMPLETE -- flag6 / dycoms2_rf01 COMPLETE -- flag6 / gabls3_night COMPLETE -- flag6 / dycoms2_rf02_do COMPLETE -- flag6 / gabls2 COMPLETE -- flag6 / dycoms2_rf02_ds COMPLETE -- flag6 / jun25_altocu COMPLETE -- flag6 / gabls3 COMPLETE -- flag6 / mpace_a COMPLETE -- flag6 / mpace_b COMPLETE -- flag6 / mc3e COMPLETE -- flag6 / mpace_b_silhs COMPLETE -- flag6 / rico_silhs COMPLETE -- flag6 / wangara COMPLETE -- flag6 / rico COMPLETE -- flag7 / arm COMPLETE -- flag6 / nov11_altocu COMPLETE -- flag7 / bomex COMPLETE -- flag7 / astex_a209 COMPLETE -- flag7 / cgils_s6 COMPLETE -- flag7 / atex COMPLETE -- flag7 / cgils_s11 COMPLETE -- flag6 / twp_ice COMPLETE -- flag7 / arm_97 COMPLETE -- flag7 / cgils_s12 COMPLETE -- flag7 / dycoms2_rf01_fixed_sst COMPLETE -- flag7 / dycoms2_rf02_nd COMPLETE -- flag7 / dycoms2_rf02_so COMPLETE -- flag7 / clex9_nov02 COMPLETE -- flag7 / dycoms2_rf01 COMPLETE -- flag7 / fire COMPLETE -- flag7 / gabls3_night COMPLETE -- flag7 / clex9_oct14 COMPLETE -- flag7 / gabls2 COMPLETE -- flag7 / dycoms2_rf02_do COMPLETE -- flag7 / jun25_altocu COMPLETE -- flag7 / dycoms2_rf02_ds COMPLETE -- flag7 / gabls3 COMPLETE -- flag7 / mpace_a COMPLETE -- flag7 / mc3e COMPLETE -- flag7 / mpace_b COMPLETE -- flag6 / lba COMPLETE -- flag7 / mpace_b_silhs COMPLETE -- flag7 / rico COMPLETE -- flag7 / rico_silhs COMPLETE -- flag7 / wangara COMPLETE -- flag8 / arm COMPLETE -- flag7 / nov11_altocu COMPLETE -- flag8 / bomex COMPLETE -- flag8 / astex_a209 COMPLETE -- flag8 / atex COMPLETE -- flag8 / cgils_s11 COMPLETE -- flag8 / cgils_s6 COMPLETE -- flag8 / cgils_s12 COMPLETE -- flag7 / twp_ice COMPLETE -- flag8 / dycoms2_rf01_fixed_sst COMPLETE -- flag8 / arm_97 COMPLETE -- flag8 / dycoms2_rf02_nd COMPLETE -- flag8 / clex9_nov02 COMPLETE -- flag8 / dycoms2_rf02_so COMPLETE -- flag8 / fire COMPLETE -- flag8 / dycoms2_rf01 COMPLETE -- flag8 / gabls3_night COMPLETE -- flag8 / clex9_oct14 COMPLETE -- flag8 / gabls2 COMPLETE -- flag7 / lba COMPLETE -- flag8 / jun25_altocu COMPLETE -- flag8 / dycoms2_rf02_do COMPLETE -- flag8 / dycoms2_rf02_ds COMPLETE -- flag8 / gabls3 COMPLETE -- flag8 / mpace_a COMPLETE -- flag8 / mc3e COMPLETE -- flag8 / mpace_b COMPLETE -- flag8 / rico_silhs COMPLETE -- flag8 / mpace_b_silhs COMPLETE -- flag8 / rico COMPLETE -- flag8 / wangara COMPLETE -- flag8 / nov11_altocu COMPLETE -- flag9 / arm COMPLETE -- flag9 / astex_a209 COMPLETE -- flag9 / bomex COMPLETE -- flag9 / atex COMPLETE -- flag9 / cgils_s11 COMPLETE -- flag9 / cgils_s6 COMPLETE -- flag9 / cgils_s12 COMPLETE -- flag8 / twp_ice COMPLETE -- flag9 / dycoms2_rf01_fixed_sst COMPLETE -- flag9 / arm_97 COMPLETE -- flag9 / dycoms2_rf02_nd COMPLETE -- flag9 / clex9_nov02 COMPLETE -- flag9 / dycoms2_rf02_so COMPLETE -- flag9 / dycoms2_rf01 COMPLETE -- flag9 / fire COMPLETE -- flag9 / clex9_oct14 COMPLETE -- flag9 / gabls3_night COMPLETE -- flag9 / gabls2 COMPLETE -- flag9 / dycoms2_rf02_do COMPLETE -- flag9 / jun25_altocu COMPLETE -- flag8 / lba COMPLETE -- flag9 / dycoms2_rf02_ds COMPLETE -- flag9 / gabls3 COMPLETE -- flag9 / mpace_a COMPLETE -- flag9 / mc3e COMPLETE -- flag9 / mpace_b COMPLETE -- flag9 / mpace_b_silhs COMPLETE -- flag9 / rico COMPLETE -- flag9 / rico_silhs COMPLETE -- flag9 / wangara COMPLETE -- flag9 / nov11_altocu COMPLETE -- flag10 / arm COMPLETE -- flag10 / bomex COMPLETE -- flag10 / astex_a209 COMPLETE -- flag10 / atex COMPLETE -- flag10 / cgils_s11 COMPLETE -- flag10 / cgils_s6 COMPLETE -- flag10 / cgils_s12 COMPLETE -- flag9 / twp_ice COMPLETE -- flag10 / dycoms2_rf01_fixed_sst COMPLETE -- flag10 / arm_97 COMPLETE -- flag10 / dycoms2_rf02_nd COMPLETE -- flag10 / clex9_nov02 COMPLETE -- flag10 / dycoms2_rf01 COMPLETE -- flag10 / dycoms2_rf02_so COMPLETE -- flag10 / fire COMPLETE -- flag10 / clex9_oct14 COMPLETE -- flag10 / gabls3_night COMPLETE -- flag10 / gabls2 COMPLETE -- flag10 / dycoms2_rf02_do COMPLETE -- flag10 / dycoms2_rf02_ds COMPLETE -- flag9 / lba COMPLETE -- flag10 / jun25_altocu COMPLETE -- flag10 / gabls3 COMPLETE -- flag10 / mpace_a COMPLETE -- flag10 / mc3e COMPLETE -- flag10 / mpace_b COMPLETE -- flag10 / mpace_b_silhs COMPLETE -- flag10 / rico_silhs COMPLETE -- flag10 / rico ERROR -- flag11 / arm_97 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag11/arm_97.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag11 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running arm_97 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 39 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 40 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 41 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 42 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 43 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 44 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 45 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 46 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 47 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 48 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 49 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 50 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 51 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rtm < 0 in Before BUGSrad. at i = 1 and k = 52 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 39 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 40 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 41 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 42 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 43 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 44 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 45 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 46 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 47 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 48 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 49 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 50 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 51 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees rvm < 0 in Before BUGSrad. at i = 1 and k = 52 Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in radiation_driver: Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in radiation, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag11/arm_97.timing Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7dc4fb229d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7dc4fb229e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.46 s -------------------------------------------------- COMPLETE -- flag10 / wangara COMPLETE -- flag11 / arm COMPLETE -- flag10 / nov11_altocu COMPLETE -- flag11 / bomex COMPLETE -- flag11 / astex_a209 COMPLETE -- flag11 / cgils_s6 COMPLETE -- flag11 / atex COMPLETE -- flag11 / cgils_s11 COMPLETE -- flag11 / cgils_s12 COMPLETE -- flag11 / dycoms2_rf01_fixed_sst COMPLETE -- flag10 / twp_ice COMPLETE -- flag11 / dycoms2_rf02_nd COMPLETE -- flag11 / clex9_nov02 COMPLETE -- flag11 / dycoms2_rf02_so COMPLETE -- flag11 / dycoms2_rf01 COMPLETE -- flag11 / fire COMPLETE -- flag11 / clex9_oct14 COMPLETE -- flag11 / gabls3_night COMPLETE -- flag11 / gabls2 COMPLETE -- flag11 / dycoms2_rf02_do COMPLETE -- flag10 / lba COMPLETE -- flag11 / dycoms2_rf02_ds COMPLETE -- flag11 / jun25_altocu COMPLETE -- flag11 / gabls3 COMPLETE -- flag11 / mpace_a COMPLETE -- flag11 / mc3e COMPLETE -- flag11 / mpace_b COMPLETE -- flag11 / mpace_b_silhs COMPLETE -- flag11 / rico COMPLETE -- flag11 / rico_silhs COMPLETE -- flag11 / wangara COMPLETE -- flag12 / arm COMPLETE -- flag11 / nov11_altocu COMPLETE -- flag12 / astex_a209 COMPLETE -- flag12 / bomex COMPLETE -- flag12 / atex COMPLETE -- flag12 / cgils_s11 COMPLETE -- flag12 / cgils_s6 COMPLETE -- flag12 / cgils_s12 COMPLETE -- flag12 / dycoms2_rf01_fixed_sst COMPLETE -- flag12 / arm_97 COMPLETE -- flag11 / twp_ice COMPLETE -- flag12 / dycoms2_rf02_nd COMPLETE -- flag12 / clex9_nov02 COMPLETE -- flag12 / dycoms2_rf02_so COMPLETE -- flag12 / fire COMPLETE -- flag12 / dycoms2_rf01 COMPLETE -- flag12 / clex9_oct14 COMPLETE -- flag12 / gabls3_night COMPLETE -- flag12 / gabls2 COMPLETE -- flag12 / dycoms2_rf02_do COMPLETE -- flag12 / jun25_altocu COMPLETE -- flag11 / lba COMPLETE -- flag12 / dycoms2_rf02_ds COMPLETE -- flag12 / gabls3 COMPLETE -- flag12 / mpace_a COMPLETE -- flag12 / mc3e COMPLETE -- flag12 / mpace_b COMPLETE -- flag12 / rico_silhs ERROR -- flag13 / arm /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/arm.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running arm =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/arm.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x73b2e6429d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x73b2e6429e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.33 s -------------------------------------------------- COMPLETE -- flag12 / mpace_b_silhs COMPLETE -- flag12 / rico ERROR -- flag13 / arm_97 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/arm_97.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running arm_97 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/arm_97.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7ca44d229d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7ca44d229e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.41 s -------------------------------------------------- COMPLETE -- flag12 / wangara ERROR -- flag13 / astex_a209 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/astex_a209.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running astex_a209 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/astex_a209.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7a4473829d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7a4473829e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / atex /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/atex.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running atex =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/atex.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x779c23429d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x779c23429e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / bomex /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/bomex.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running bomex =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/bomex.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x727306629d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x727306629e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.40 s -------------------------------------------------- ERROR -- flag13 / cgils_s11 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/cgils_s11.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running cgils_s11 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/cgils_s11.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7576b7429d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7576b7429e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / cgils_s12 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/cgils_s12.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running cgils_s12 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/cgils_s12.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x700d92029d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x700d92029e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.38 s -------------------------------------------------- ERROR -- flag13 / cgils_s6 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/cgils_s6.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running cgils_s6 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/cgils_s6.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7126ae229d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7126ae229e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.40 s -------------------------------------------------- ERROR -- flag13 / clex9_nov02 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/clex9_nov02.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running clex9_nov02 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/clex9_nov02.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7b4801e29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7b4801e29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.39 s -------------------------------------------------- ERROR -- flag13 / clex9_oct14 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/clex9_oct14.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running clex9_oct14 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/clex9_oct14.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x76dcae029d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x76dcae029e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.38 s -------------------------------------------------- ERROR -- flag13 / dycoms2_rf01 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf01.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf01 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf01.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7e38f8c29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7e38f8c29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.36 s -------------------------------------------------- ERROR -- flag13 / dycoms2_rf01_fixed_sst /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf01_fixed_sst.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf01_fixed_sst =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf01_fixed_sst.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7734e2029d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7734e2029e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.34 s -------------------------------------------------- ERROR -- flag13 / dycoms2_rf02_do /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_do.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf02_do =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_do.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7b10dc029d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7b10dc029e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.40 s -------------------------------------------------- ERROR -- flag13 / dycoms2_rf02_nd /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_nd.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf02_nd =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_nd.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7e62e9e29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7e62e9e29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.39 s -------------------------------------------------- ERROR -- flag13 / dycoms2_rf02_ds /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_ds.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf02_ds =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_ds.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7c6a83829d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7c6a83829e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.42 s -------------------------------------------------- COMPLETE -- flag12 / nov11_altocu ERROR -- flag13 / dycoms2_rf02_so /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_so.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running dycoms2_rf02_so =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/dycoms2_rf02_so.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7afee7c29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7afee7c29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / fire /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/fire.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running fire =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/fire.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x77b6f4629d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x77b6f4629e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.35 s -------------------------------------------------- ERROR -- flag13 / gabls2 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/gabls2.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running gabls2 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/gabls2.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7a281a229d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7a281a229e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.35 s -------------------------------------------------- ERROR -- flag13 / gabls3_night /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/gabls3_night.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running gabls3_night =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/gabls3_night.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7e22c7829d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7e22c7829e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.35 s -------------------------------------------------- ERROR -- flag13 / gabls3 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/gabls3.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running gabls3 =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/gabls3.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x701549c29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x701549c29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.35 s -------------------------------------------------- ERROR -- flag13 / jun25_altocu /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/jun25_altocu.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running jun25_altocu =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/jun25_altocu.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x79a265629d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x79a265629e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / lba /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/lba.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running lba =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/lba.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7cdad7429d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7cdad7429e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / mpace_a /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_a.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running mpace_a =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_a.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x77f6fc229d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x77f6fc229e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.36 s -------------------------------------------------- ERROR -- flag13 / mc3e /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mc3e.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running mc3e =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mc3e.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7de0e6c29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7de0e6c29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.50 s -------------------------------------------------- ERROR -- flag13 / mpace_b /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running mpace_b =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x70c808e29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x70c808e29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.36 s -------------------------------------------------- ERROR -- flag13 / mpace_b_silhs /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b_silhs.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running mpace_b_silhs =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/mpace_b_silhs.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7affe6a29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7affe6a29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.37 s -------------------------------------------------- ERROR -- flag13 / nov11_altocu /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/nov11_altocu.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running nov11_altocu =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/nov11_altocu.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x7791e5c29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x7791e5c29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.34 s -------------------------------------------------- ERROR -- flag13 / rico /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running rico =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x70b2f1c29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x70b2f1c29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.36 s -------------------------------------------------- ERROR -- flag13 / rico_silhs /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico_silhs.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running rico_silhs =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/rico_silhs.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x75a16fe29d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x75a16fe29e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.34 s -------------------------------------------------- ERROR -- flag13 / wangara /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/wangara.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running wangara =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/wangara.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x738c07829d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x738c07829e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.36 s -------------------------------------------------- ERROR -- flag13 / twp_ice /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/twp_ice.in Output directory: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13 - using install dir (latest): /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/install/gcc_PRECdouble - using executable: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/run_scripts/../install/latest/clubb_standalone =================== Running twp_ice =================== Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees l_Lscale_plume_centered requires l_avg_Lscale Fatal error in calc_Lscale_directly Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale_directly in calc_Lscale Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Error calling calc_Lscale in advance_clubb_core Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error advance_clubb_core in API module Fatal error in CLUBB - MPI Process 1 / Chunk index 1 Column index not available. Latitude/Longitude for column 1: 15.00/-56.50 Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees Fatal error in advance_clubb_core, check your parameter values and timestep Writing timing results to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/output/flag13/twp_ice.timing ERROR STOP Fatal error in clubb, check your parameter values and timestep Error termination. Backtrace: #0 0x403920 in ??? #1 0x4036de in ??? #2 0x70163d429d8f in __libc_start_call_main at ../sysdeps/nptl/libc_start_call_main.h:58 #3 0x70163d429e3f in __libc_start_main_impl at ../csu/libc-start.c:392 #4 0x403704 in ??? #5 0xffffffffffffffff in ??? -------------------------------------------------- run_scm.py total runtime: 0.42 s -------------------------------------------------- COMPLETE -- flag12 / twp_ice COMPLETE -- flag14 / bomex COMPLETE -- flag14 / arm COMPLETE -- flag14 / cgils_s6 COMPLETE -- flag14 / astex_a209 COMPLETE -- flag14 / atex COMPLETE -- flag14 / cgils_s11 COMPLETE -- flag14 / cgils_s12 COMPLETE -- flag14 / dycoms2_rf01_fixed_sst COMPLETE -- flag14 / arm_97 COMPLETE -- flag14 / dycoms2_rf02_nd COMPLETE -- flag12 / lba COMPLETE -- flag14 / dycoms2_rf01 COMPLETE -- flag14 / clex9_nov02 COMPLETE -- flag14 / fire COMPLETE -- flag14 / gabls3_night COMPLETE -- flag14 / clex9_oct14 COMPLETE -- flag14 / dycoms2_rf02_so COMPLETE -- flag14 / gabls2 COMPLETE -- flag14 / dycoms2_rf02_do COMPLETE -- flag14 / jun25_altocu COMPLETE -- flag14 / dycoms2_rf02_ds COMPLETE -- flag14 / gabls3 COMPLETE -- flag14 / mpace_a COMPLETE -- flag14 / mpace_b COMPLETE -- flag14 / mc3e COMPLETE -- flag14 / wangara COMPLETE -- flag14 / mpace_b_silhs COMPLETE -- flag14 / rico_silhs COMPLETE -- flag14 / rico COMPLETE -- flag15 / arm COMPLETE -- flag14 / nov11_altocu COMPLETE -- flag15 / bomex COMPLETE -- flag15 / astex_a209 COMPLETE -- flag15 / atex COMPLETE -- flag15 / cgils_s6 COMPLETE -- flag15 / cgils_s11 COMPLETE -- flag15 / cgils_s12 COMPLETE -- flag14 / twp_ice COMPLETE -- flag15 / arm_97 COMPLETE -- flag15 / dycoms2_rf01_fixed_sst COMPLETE -- flag15 / clex9_nov02 COMPLETE -- flag15 / dycoms2_rf02_nd COMPLETE -- flag15 / dycoms2_rf02_so COMPLETE -- flag15 / dycoms2_rf01 COMPLETE -- flag15 / fire COMPLETE -- flag15 / clex9_oct14 COMPLETE -- flag15 / gabls3_night COMPLETE -- flag15 / gabls2 COMPLETE -- flag15 / dycoms2_rf02_do COMPLETE -- flag14 / lba COMPLETE -- flag15 / dycoms2_rf02_ds COMPLETE -- flag15 / jun25_altocu COMPLETE -- flag15 / gabls3 COMPLETE -- flag15 / mpace_a COMPLETE -- flag15 / mc3e COMPLETE -- flag15 / mpace_b COMPLETE -- flag15 / rico COMPLETE -- flag15 / rico_silhs COMPLETE -- flag15 / mpace_b_silhs COMPLETE -- flag15 / wangara COMPLETE -- flag15 / nov11_altocu COMPLETE -- flag16 / arm COMPLETE -- flag16 / bomex COMPLETE -- flag16 / astex_a209 COMPLETE -- flag16 / atex COMPLETE -- flag16 / cgils_s11 COMPLETE -- flag16 / cgils_s6 COMPLETE -- flag16 / cgils_s12 COMPLETE -- flag15 / twp_ice COMPLETE -- flag16 / dycoms2_rf01_fixed_sst COMPLETE -- flag16 / arm_97 COMPLETE -- flag16 / dycoms2_rf02_nd COMPLETE -- flag16 / clex9_nov02 COMPLETE -- flag16 / dycoms2_rf02_so COMPLETE -- flag16 / dycoms2_rf01 COMPLETE -- flag16 / fire COMPLETE -- flag16 / clex9_oct14 COMPLETE -- flag16 / gabls3_night COMPLETE -- flag16 / gabls2 COMPLETE -- flag15 / lba COMPLETE -- flag16 / dycoms2_rf02_do COMPLETE -- flag16 / jun25_altocu COMPLETE -- flag16 / dycoms2_rf02_ds COMPLETE -- flag16 / gabls3 COMPLETE -- flag16 / mpace_b COMPLETE -- flag16 / mpace_a COMPLETE -- flag16 / mc3e COMPLETE -- flag16 / rico_silhs COMPLETE -- flag16 / rico COMPLETE -- flag16 / mpace_b_silhs COMPLETE -- flag16 / wangara COMPLETE -- flag17 / arm COMPLETE -- flag17 / bomex COMPLETE -- flag16 / nov11_altocu COMPLETE -- flag17 / astex_a209 COMPLETE -- flag17 / atex COMPLETE -- flag17 / cgils_s6 COMPLETE -- flag17 / cgils_s11 COMPLETE -- flag17 / cgils_s12 COMPLETE -- flag16 / twp_ice COMPLETE -- flag17 / dycoms2_rf01_fixed_sst COMPLETE -- flag17 / arm_97 COMPLETE -- flag17 / dycoms2_rf02_nd COMPLETE -- flag17 / clex9_nov02 COMPLETE -- flag17 / dycoms2_rf02_so COMPLETE -- flag17 / fire COMPLETE -- flag17 / dycoms2_rf01 COMPLETE -- flag17 / clex9_oct14 COMPLETE -- flag17 / gabls3_night COMPLETE -- flag17 / gabls2 COMPLETE -- flag17 / dycoms2_rf02_do COMPLETE -- flag16 / lba COMPLETE -- flag17 / jun25_altocu COMPLETE -- flag17 / dycoms2_rf02_ds COMPLETE -- flag17 / gabls3 COMPLETE -- flag17 / mpace_a COMPLETE -- flag17 / mc3e COMPLETE -- flag17 / mpace_b COMPLETE -- flag17 / mpace_b_silhs COMPLETE -- flag17 / rico_silhs COMPLETE -- flag17 / rico COMPLETE -- flag17 / wangara COMPLETE -- flag18 / arm COMPLETE -- flag17 / nov11_altocu COMPLETE -- flag18 / astex_a209 COMPLETE -- flag18 / bomex COMPLETE -- flag18 / atex COMPLETE -- flag18 / cgils_s11 COMPLETE -- flag18 / cgils_s6 COMPLETE -- flag18 / cgils_s12 COMPLETE -- flag17 / twp_ice COMPLETE -- flag18 / dycoms2_rf01_fixed_sst COMPLETE -- flag18 / arm_97 COMPLETE -- flag18 / dycoms2_rf02_nd COMPLETE -- flag18 / clex9_nov02 COMPLETE -- flag18 / fire COMPLETE -- flag18 / dycoms2_rf02_so COMPLETE -- flag18 / dycoms2_rf01 COMPLETE -- flag18 / clex9_oct14 COMPLETE -- flag18 / gabls3_night COMPLETE -- flag18 / gabls2 COMPLETE -- flag18 / dycoms2_rf02_do COMPLETE -- flag17 / lba COMPLETE -- flag18 / jun25_altocu COMPLETE -- flag18 / dycoms2_rf02_ds COMPLETE -- flag18 / gabls3 COMPLETE -- flag18 / mpace_a COMPLETE -- flag18 / mc3e COMPLETE -- flag18 / mpace_b COMPLETE -- flag18 / rico_silhs COMPLETE -- flag18 / rico COMPLETE -- flag18 / mpace_b_silhs COMPLETE -- flag18 / wangara COMPLETE -- flag18 / nov11_altocu COMPLETE -- flag18 / twp_ice COMPLETE -- flag18 / lba =================== Runs Complete =================== flag11 failures: arm_97 flag13 failures: arm, arm_97, astex_a209, atex, bomex, cgils_s11, cgils_s12, cgils_s6, clex9_nov02, clex9_oct14, dycoms2_rf01, dycoms2_rf01_fixed_sst, dycoms2_rf02_do, dycoms2_rf02_ds, dycoms2_rf02_nd, dycoms2_rf02_so, fire, gabls2, gabls3, gabls3_night, jun25_altocu, lba, mc3e, mpace_a, mpace_b, mpace_b_silhs, nov11_altocu, rico, rico_silhs, twp_ice, wangara Some CLUBB runs failed. See messages above. Cloning into '/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb'... Note: switching to 'origin/readiopdata_merge2'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c <new-branch-name> Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at b306d548f Changes to prepare for merge into master -- The Fortran compiler identification is GNU 13.1.0 -- The C compiler identification is GNU 13.1.0 -- The CXX compiler identification is GNU 13.1.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran - skipped -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiling with double precision -- Performing Test NETCDF_ABI_COMPATIBLE -- Performing Test NETCDF_ABI_COMPATIBLE - Success -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/install/gcc_PRECdouble about to cmnake /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble Running CMake configure... 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src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlapy2.f.o [531/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgemv.f.o [532/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlanst.f.o [533/927] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/strmm.f.o [534/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlarf.f.o [535/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlarfg.f.o [536/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlaqsy.f.o [537/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlangt.f.o [538/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbmv.f.o [539/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlartg.f.o [540/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlangb.f.o [541/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlassq.f.o [542/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgtts2.f.o [543/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgtsv.f.o [544/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlaset.f.o [545/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbrfs.f.o [546/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlaqgb.f.o [547/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dnrm2.f.o [548/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgemm.f.o [549/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgtrfs.f.o [550/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlaswp.f.o [551/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlansy.f.o [552/927] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/strsm.f.o [553/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/drscl.f.o [554/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlagtm.f.o [555/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dpoequ.f.o [556/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbsvx.f.o [557/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dorg2l.f.o [558/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlasrt.f.o [559/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dpotrf2.f.o [560/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dscal.f.o [561/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dorg2r.f.o [562/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dswap.f.o [563/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlatrd.f.o [564/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dpotrf.f.o [565/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dorgtr.f.o [566/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsyev.f.o [567/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlascl.f.o [568/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlarft.f.o [569/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dorgqr.f.o [570/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dorgql.f.o [571/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/idamax.f.o [572/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iladlc.f.o [573/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ieeeck.f.o [574/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iladlr.f.o [575/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90-pp.f90 [576/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90-pp.f90 [577/927] Building Fortran object src/Lapack/Lapack_shared/CMakeFiles/clubb_lapack_shared.dir/lsame.f.o [578/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90-pp.f90 [579/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90-pp.f90 [580/927] Building Fortran object src/Lapack/Lapack_shared/CMakeFiles/clubb_lapack_shared.dir/xerbla.f.o [581/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsyr2.f.o [582/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90-pp.f90 [583/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90-pp.f90 [584/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90-pp.f90 [585/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90-pp.f90 [586/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsytd2.f.o [587/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90-pp.f90 [588/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90-pp.f90 [589/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90-pp.f90 [590/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90-pp.f90 [591/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iparmq.f.o [592/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90-pp.f90 [593/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90-pp.f90 [594/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90-pp.f90 [595/927] Building Fortran preprocessed src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90-pp.f90 [596/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dgbtrf.f.o [597/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlantb.f.o [598/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsymv.f.o [599/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlarfb.f.o [600/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsytrd.f.o [601/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlasr.f.o [602/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsterf.f.o [603/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dlatbs.f.o [604/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ilaenv.f.o [605/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsyrk.f.o [606/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsyr2k.f.o [607/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtbsv.f.o [608/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmv.f.o [609/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dsteqr.f.o [610/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmm.f.o [611/927] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrsm.f.o [612/927] Linking Fortran static library src/Lapack/liblapack_lib.a [613/927] Generating Fortran dyndep file src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Fortran.dd [614/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_precision.F90.o [615/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameter_indices.F90.o [616/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/array_index.F90.o [617/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/error_code.F90.o [618/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/endian.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:167:53: 167 | call mvbits( i_element, 56, 8, i_element_br, 0 ) | ^ Warning: 'i_element_br' is used uninitialized [-Wuninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:159:39: 159 | integer(kind=int64) :: i_element_br | ^ note: 'i_element_br' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:123:53: 123 | CALL MVBITS( i_element, 24, 8, i_element_br, 0 ) | ^ Warning: 'i_element_br' is used uninitialized [-Wuninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/endian.F90:117:69: 117 | INTEGER(KIND=int32) :: i_element_br | ^ note: 'i_element_br' declared here [619/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/constants_clubb.F90.o [620/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_interfaces.F90.o [621/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calendar.F90.o [622/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/file_functions.F90.o [623/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/T_in_K_module.F90.o [624/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/LY93_pdf.F90.o [625/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf.F90.o [626/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Nc_Ncn_eqns.F90.o [627/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/model_flags.F90.o [628/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/tridiag_lu_solver.F90.o [629/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o [630/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mean_adv.F90.o [631/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/hydromet_pdf_parameter_module.F90.o [632/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/err_info_type_module.F90.o [633/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_tsdadg_pdf.F90.o [634/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_lu_solver.F90.o [635/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diagnose_correlations_module.F90.o [636/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Skx_module.F90.o [637/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/interpolation.F90.o [638/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o [639/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_operations.F90.o [640/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_bicgstab_solver.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/penta_bicgstab_solver.F90:140:10: 140 | if ( norm_rhs == 0.0) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [641/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/corr_varnce_module.F90.o [642/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf.F90.o [643/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/adg1_adg2_3d_luhar_pdf.F90.o [644/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/index_mapping.F90.o [645/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o [646/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_class.F90.o [647/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_solver_wrapper.F90.o [648/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o [649/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o [650/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o [651/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o [652/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o [653/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o [654/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o [655/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:1210:43: 1210 | if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:1104:15: 1104 | if(dm(i) == zero) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:185:71: 185 | *( val_below + lin_spline_rho_vals(l) )/2 | ^ Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:129:17: 129 | level_below, & ! The altitude of the level or spline connection point below [m] | ^ note: 'level_below' was declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:185:71: 185 | *( val_below + lin_spline_rho_vals(l) )/2 | ^ Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/remapping_module.F90:128:15: 128 | val_below, & ! The rho value of the level or spline connection point below [kg/m^3] | ^ note: 'val_below' was declared here [656/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/parameters_tunable.F90:1822:30: 1822 | subroutine unpack_parameters & | ^ Warning: 'unpack_parameters' defined but not used [-Wunused-function] [657/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o [658/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o [659/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf_main.F90.o [660/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o [661/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o [662/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o [663/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mono_flux_limiter.F90.o [664/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o [665/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o [666/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/fill_holes.F90.o [667/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o [668/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o [669/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o [670/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/mixing_length.F90:1096:16: 1096 | if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= & | ^ Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/mixing_length.F90:730:42: 730 | real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1 | ^ note: 'dcape_dz_j' was declared here [671/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o [672/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o [673/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o [674/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o [675/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/advance_wp2_wp3_module.F90:1918:12: 1918 | if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then | ^ Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20: 1470 | wp2_avg_before, & | ^ note: 'wp2_avg_before' was declared here [676/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o [677/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o [678/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o [679/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o [680/927] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o [681/927] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a [682/927] Generating Fortran dyndep file src/CMakeFiles/text_writer_lib.dir/Fortran.dd [683/927] Generating Fortran dyndep file src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/Fortran.dd [684/927] Generating Fortran dyndep file src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/Fortran.dd [685/927] Generating Fortran dyndep file src/Microphys/Microphys_utils/CMakeFiles/microphys_utils_lib.dir/Fortran.dd [686/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/kinds.F90.o [687/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19.F.o [688/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa15.F.o [689/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21.F.o [690/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22.F.o [691/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa20g.F.o [692/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21g.F.o [693/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa25.F.o [694/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa28.F.o [695/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18g.F.o [696/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22g.F.o [697/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa27.F.o [698/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa27r.F.o [699/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa14g.F.o [700/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa26.F.o [701/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12g.F.o [702/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18.F.o [703/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa11g.F.o [704/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa13g.F.o [705/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19g.F.o [706/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa10g.F.o [707/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa5g.F.o [708/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_physconst.F90.o [709/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7.F.o [710/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa17g.F.o [711/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa6.F.o [712/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7g.F.o [713/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa8g.F.o [714/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/newexp.F90.o [715/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/rayle.F.o [716/927] Building Fortran object src/CMakeFiles/text_writer_lib.dir/text_writer.F90.o [717/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp2.F.o [718/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esati.F.o [719/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esatv.F.o [720/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/frzh.F.o [721/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp1.F.o [722/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/gamma.F.o [723/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_planck.F90.o [724/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_sel.F.o [725/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa9g.F.o [726/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjmlt.F.o [727/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12.F.o [728/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esat_new.F.o [729/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa9.F.o [730/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqg.F.o [731/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qsatvi.F.o [732/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/gascon.F.o [733/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqs.F.o [734/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/slope.F.o [735/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqi.F.o [736/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qtadj.F.o [737/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/conice.F.o [738/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqr.F.o [739/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqi.F.o [740/927] Linking Fortran static library src/libtext_writer_lib.a [741/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmcol.F.o [742/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloudg.F.o [743/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqw.F.o [744/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw.F.o [745/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw.F.o [746/927] Building Fortran object src/Microphys/Microphys_utils/CMakeFiles/microphys_utils_lib.dir/microphys_stats_vars_module.F90.o [747/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloud_correlate.F90.o [748/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_ocastrndm.F90.o [749/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_bs.F.o [750/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_iter.F.o [751/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_iter.F.o [752/927] Linking Fortran static library src/Microphys/Microphys_utils/libmicrophys_utils_lib.a [753/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_ocastrndm.F90.o [754/927] Generating Fortran dyndep file src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Fortran.dd [755/927] Generating Fortran dyndep file src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/Fortran.dd [756/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/parameters_KK.F90.o [757/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic_constants.f90.o [758/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_local_means.F90.o [759/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/AiryFunction.f90.o [760/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/gases_ckd.F90.o [761/927] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjtq.F.o [762/927] Linking Fortran static library src/Microphys/COAMPS_microphys/libcoamps_lib.a [763/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_rad.F.o [764/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_lwr.F.o [765/927] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_swr.F.o [766/927] Linking Fortran static library src/Radiation/BUGSrad/libbugsrad_lib.a [767/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic.f90.o [768/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_utilities.F90.o [769/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_means.F90.o [770/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_covar.F90.o [771/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_all_MM.F90.o [772/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_means.F90.o [773/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_variances.F90.o [774/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_Nrm_tendencies.F90.o [775/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_turbulent_sed.F90.o [776/927] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_covariances.F90.o [777/927] Linking Fortran static library src/Microphys/KK_microphys/libKK_microphys_lib.a [778/927] Generating Fortran dyndep file src/SILHS/CMakeFiles/silhs_lib.dir/Fortran.dd [779/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_arrays.F90.o [780/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/parameters_silhs.F90.o [781/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/est_kessler_microphys_module.F90.o [782/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/transform_to_pdf_module.F90.o [783/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/mt95.F90.o [784/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o [785/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o [786/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o [787/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/SILHS/silhs_importance_sample_module.F90:638:62: 633 | do category=1, num_importance_categories | 2 ...... 638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] [788/927] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o [789/927] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a [790/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/SILHS/latin_hypercube_driver_module.F90:1595:10: 1595 | if ( X_u_chi(sample) < (one - cloud_frac_i) ) then | ^ Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/SILHS/latin_hypercube_driver_module.F90:1577:18: 1577 | cloud_frac_i | ^ note: 'cloud_frac_i' was declared here [791/927] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o [792/927] Linking Fortran static library src/SILHS/libsilhs_lib.a [793/927] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd [794/927] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd [795/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o [796/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o [797/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o [798/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o [799/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o [800/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o [801/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o [802/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o [803/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o [804/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o [805/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o [806/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o [807/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o [808/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o [809/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/Numerical_recipes/ran_state.f90:8:59: 8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1 | 1 Warning: Integer outside symmetric range implied by Standard Fortran at (1) [810/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o [811/927] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o [812/927] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a [813/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o [814/927] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o [815/927] Linking Fortran static library src/Radiation/libradiation_lib.a [816/927] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd [817/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o [818/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o [819/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o [820/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o [821/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o [822/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/Input_fields/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [823/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o [824/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o [825/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o [826/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1468:21: 1468 | if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1 | 1 Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1490:18: 1490 | if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1 | 1 Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1036:15: 1036 | if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1038:15: 1038 | if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1040:15: 1040 | if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1043:15: 1043 | if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1045:15: 1045 | if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1047:15: 1047 | if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:354:13: 354 | if( ANY(Ts_in == 0.0) ) then | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:618:12: 618 | if(T_in(i,nlev+1)/=missing_value) then | 1 Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:634:12: 634 | if(T_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:636:12: 636 | if(q_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:638:12: 638 | if(u_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:640:12: 640 | if(v_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:645:15: 645 | if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:649:15: 649 | if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:656:12: 656 | if(ug_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:658:12: 658 | if(vg_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1250:42: 1250 | character dim_name*( NF90_MAX_NAME ) | 1 Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1252:33: 1252 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1252:43: 1252 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1252:46: 1252 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'i' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1235:60: 1235 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1235:54: 1235 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1236:23: 1236 | var, use_NF90_REAL, status, required) | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:1165:67: 1165 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, & | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:749:51: 749 | get_add_surface_data, ntime, & | 1 Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:748:81: 748 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, & | 1 Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:294:32: 294 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:294:38: 294 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:295:19: 295 | integer :: varID, NCID | 1 Warning: Unused variable 'varid' declared at (1) [-Wunused-variable] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:784:28: 784 | shf_in(:) = missing_value | ^ Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:34: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'shf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:784:28: 784 | shf_in(:) = missing_value | ^ Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:34: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'shf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:784:28: 784 | shf_in(:) = missing_value | ^ Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:34: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'shf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:45: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:786:31: 786 | tausrf_in(:) = missing_value | ^ Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_core/readiopdata_core_module.F90:759:59: 759 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'tausrf_in.dim[0].ubound' was declared here [827/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o FAILED: src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o MOD/readiopdata_module.mod /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran -I/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src -I/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble/MOD -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include -mieee-fp -fall-intrinsics -std=gnu -fallow-argument-mismatch -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -pedantic -O2 -march=native -msse3 -mfpmath=sse -JMOD -fPIC -fpreprocessed -c src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90-pp.f90 -o src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/src/readiopdata_module.F90:244:9: 244 | use spec_hum_to_mixing_ratio, only: & | 1 Fatal Error: Cannot open module file 'spec_hum_to_mixing_ratio.mod' for reading at (1): No such file or directory compilation terminated. [828/927] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o ninja: build stopped: subcommand failed. [91mBuild failed. See /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/build/gcc_PRECdouble/cmake_build_output.txt for details.[0m Cloning master into /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb... Running: git clone https://github.com/larson-group/clubb.git /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb Running: git checkout master (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb) Compiling CLUBB for master... Running: /usr/bin/python3 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb/compile.py (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/master/clubb) Running varying-flag cases for master... Run phase for master exited with code 1; continuing to output comparison. Cloning origin/readiopdata_merge2 into /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb... Running: git clone https://github.com/larson-group/clubb.git /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb Running: git checkout origin/readiopdata_merge2 (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb) Compiling CLUBB for origin/readiopdata_merge2... Running: /usr/bin/python3 /home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb/compile.py (cwd=/home/jenkins/workspace/run_bindiff_w_varying_flags_against_master/bindiff_against_master/origin_readiopdata_merge2/clubb) Command failed for origin/readiopdata_merge2 with exit code 1. [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE