Started by user Gunther Huebler Obtained jenkins_tests/clubb_silhs_convergence_gfortran/Jenkinsfile from git https://github.com/larson-group/clubb.git [Pipeline] Start of Pipeline [Pipeline] node Running on mitch in /home/jenkins/workspace/clubb_silhs_convergence_gfortran [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_silhs_convergence_gfortran # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' using GIT_ASKPASS to set credentials larsongroupsysadmin github token > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 1f4ec8993842ad7859cefecdfab5e067b07c53fa (refs/remotes/origin/master) Commit message: "Previous commit improved the robustness of -override option and teased out a couple bugs in tests, causing them to fail. This adds the ability to specify which namelist an override goes in if there's no associated key to replace, the failing tests can be fixed by making use of this. One test is fixed here, and the other needed a change in a BFB config hosted on the jenkins server." > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 1f4ec8993842ad7859cefecdfab5e067b07c53fa # timeout=10 > git rev-list --no-walk 1db1e01971bca05b2e95037f97c94aae0a827a50 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Compile) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + ./compile.py -- The Fortran compiler identification is GNU 13.1.0 -- The C compiler identification is GNU 13.1.0 -- The CXX compiler identification is GNU 13.1.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/gfortran - skipped -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-m5i6qvtqmd4lm4sd2zvpgk75ong5ehbm/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiling with double precision -- Performing Test NETCDF_ABI_COMPATIBLE -- Performing Test NETCDF_ABI_COMPATIBLE - Success -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_silhs_convergence_gfortran/build/gcc_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_silhs_convergence_gfortran/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_silhs_convergence_gfortran/build/gcc_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_silhs_convergence_gfortran/install/gcc_PRECdouble about to cmnake /home/jenkins/workspace/clubb_silhs_convergence_gfortran/build/gcc_PRECdouble Running CMake configure... 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Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iparmq.f.o [ 31%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/slatbs.f.o [ 31%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/slatrd.f.o [ 31%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/snrm2.f.o [ 31%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sorg2l.f.o [ 31%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sorg2r.f.o [ 31%] Built target clubb_lapack_double [ 32%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sorgql.f.o [ 32%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sorgqr.f.o [ 32%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sorgtr.f.o [ 32%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/spoequ.f.o [ 33%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/spotrf.f.o [ 33%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/srscl.f.o [ 33%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/spotrf2.f.o [ 33%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sscal.f.o [ 33%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssteqr.f.o [ 33%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/sswap.f.o [ 34%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssterf.f.o [ 34%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssyev.f.o [ 34%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssymv.f.o [ 34%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssyr2.f.o [ 35%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssyr2k.f.o [ 35%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssyrk.f.o [ 35%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssytd2.f.o [ 35%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssytrd.f.o [ 35%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/stbsv.f.o [ 36%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/strmm.f.o [ 36%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/strsm.f.o [ 36%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/strmv.f.o [ 36%] Built target clubb_lapack_single [ 36%] Linking Fortran static library liblapack_lib.a [ 36%] Built target lapack_lib Scanning dependencies of target clubb_core_lib [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_precision.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/model_flags.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameter_indices.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_interfaces.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/array_index.F90.o [ 36%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/error_code.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/constants_clubb.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_lu_solver.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/tridiag_lu_solver.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/endian.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/endian.F90:167:53: 167 | call mvbits( i_element, 56, 8, i_element_br, 0 ) | ^ Warning: 'i_element_br' is used uninitialized [-Wuninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/endian.F90:159:39: 159 | integer(kind=int64) :: i_element_br | ^ note: 'i_element_br' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/endian.F90:123:53: 123 | CALL MVBITS( i_element, 24, 8, i_element_br, 0 ) | ^ Warning: 'i_element_br' is used uninitialized [-Wuninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/endian.F90:117:69: 117 | INTEGER(KIND=int32) :: i_element_br | ^ note: 'i_element_br' declared here [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/LY93_pdf.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Nc_Ncn_eqns.F90.o [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/T_in_K_module.F90.o [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/err_info_type_module.F90.o [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/file_functions.F90.o [ 40%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calendar.F90.o [ 40%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_bicgstab_solver.F90.o [ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mean_adv.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/penta_bicgstab_solver.F90:140:10: 140 | if ( norm_rhs == 0.0) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] [ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/hydromet_pdf_parameter_module.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diagnose_correlations_module.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_tsdadg_pdf.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/interpolation.F90.o [ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_operations.F90.o [ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o [ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf.F90.o [ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Skx_module.F90.o [ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/adg1_adg2_3d_luhar_pdf.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_class.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/corr_varnce_module.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/index_mapping.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_solver_wrapper.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o [ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o [ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/remapping_module.F90:1210:43: 1210 | if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then | 1 Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/remapping_module.F90:1104:15: 1104 | if(dm(i) == zero) then | 1 Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/parameters_tunable.F90:1822:30: 1822 | subroutine unpack_parameters & | ^ Warning: 'unpack_parameters' defined but not used [-Wunused-function] [ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o [ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/remapping_module.F90:185:71: 185 | *( val_below + lin_spline_rho_vals(l) )/2 | ^ Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/remapping_module.F90:129:17: 129 | level_below, & ! The altitude of the level or spline connection point below [m] | ^ note: 'level_below' was declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/remapping_module.F90:185:71: 185 | *( val_below + lin_spline_rho_vals(l) )/2 | ^ Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/remapping_module.F90:128:15: 128 | val_below, & ! The rho value of the level or spline connection point below [kg/m^3] | ^ note: 'val_below' was declared here [ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o [ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o [ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf_main.F90.o [ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/fill_holes.F90.o [ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o [ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mono_flux_limiter.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o [ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o [ 49%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/mixing_length.F90:1096:16: 1096 | if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= & | ^ Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/mixing_length.F90:730:42: 730 | real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1 | ^ note: 'dcape_dz_j' was declared here [ 50%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o [ 50%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/advance_wp2_wp3_module.F90:1927:12: 1927 | if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then | ^ Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20: 1470 | wp2_avg_before, & | ^ note: 'wp2_avg_before' was declared here [ 50%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o [ 50%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o [ 51%] Linking Fortran static library libclubb_core_lib.a [ 51%] Built target clubb_core_lib Scanning dependencies of target text_writer_lib Scanning dependencies of target bugsrad_lib Scanning dependencies of target microphys_utils_lib Scanning dependencies of target coamps_lib [ 51%] Building Fortran object src/CMakeFiles/text_writer_lib.dir/text_writer.F90.o [ 52%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/kinds.F90.o [ 52%] Building Fortran object src/Microphys/Microphys_utils/CMakeFiles/microphys_utils_lib.dir/microphys_stats_vars_module.F90.o [ 52%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjmlt.F.o [ 52%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjtq.F.o [ 52%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/conice.F.o [ 52%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa10g.F.o [ 53%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa11g.F.o [ 54%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_physconst.F90.o [ 54%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12.F.o [ 54%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12g.F.o [ 54%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_planck.F90.o [ 55%] Linking Fortran static library libtext_writer_lib.a [ 55%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa13g.F.o [ 55%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloud_correlate.F90.o [ 55%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa14g.F.o [ 55%] Built target text_writer_lib [ 55%] Linking Fortran static library libmicrophys_utils_lib.a [ 56%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa15.F.o [ 56%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/newexp.F90.o [ 56%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_rad.F.o [ 57%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloudg.F.o [ 57%] Built target microphys_utils_lib [ 57%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa17g.F.o [ 57%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18.F.o [ 57%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp1.F.o [ 57%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18g.F.o Scanning dependencies of target morrison_microphys_lib Scanning dependencies of target KK_microphys_lib [ 57%] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o [ 57%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp2.F.o [ 57%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/rayle.F.o [ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19.F.o [ 58%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic_constants.f90.o [ 58%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw.F.o [ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19g.F.o [ 58%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/parameters_KK.F90.o [ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa20g.F.o [ 58%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_iter.F.o [ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21.F.o [ 58%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/AiryFunction.f90.o [ 59%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_ocastrndm.F90.o [ 59%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_sel.F.o [ 59%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21g.F.o [ 59%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_local_means.F90.o [ 60%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22.F.o [ 60%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_bs.F.o [ 60%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa22g.F.o [ 60%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw.F.o [ 60%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic.f90.o [ 60%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa26.F.o [ 60%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa25.F.o [ 61%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_iter.F.o [ 61%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_ocastrndm.F90.o [ 62%] Building Fortran 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src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_utilities.F90.o [ 68%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_means.F90.o [ 68%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_covar.F90.o [ 69%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_all_MM.F90.o [ 69%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_means.F90.o [ 69%] Linking Fortran static library libbugsrad_lib.a [ 69%] Built target bugsrad_lib [ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_covariances.F90.o [ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_variances.F90.o [ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_turbulent_sed.F90.o [ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_Nrm_tendencies.F90.o [ 71%] Linking Fortran static library libKK_microphys_lib.a [ 71%] Built target KK_microphys_lib Scanning dependencies of target silhs_lib [ 72%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/est_kessler_microphys_module.F90.o [ 72%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/parameters_silhs.F90.o [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/transform_to_pdf_module.F90.o [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/mt95.F90.o [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_arrays.F90.o [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o [ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/SILHS/silhs_importance_sample_module.F90:642:62: 637 | do category=1, num_importance_categories | 2 ...... 642 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] [ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o [ 74%] Linking Fortran static library libmorrison_microphys_lib.a [ 74%] Built target morrison_microphys_lib /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/SILHS/latin_hypercube_driver_module.F90:1597:10: 1597 | if ( X_u_chi(sample) < (one - cloud_frac_i) ) then | ^ Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/SILHS/latin_hypercube_driver_module.F90:1579:18: 1579 | cloud_frac_i | ^ note: 'cloud_frac_i' was declared here [ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o [ 74%] Linking Fortran static library libsilhs_lib.a [ 74%] Built target silhs_lib Scanning dependencies of target numerical_recipes_lib Scanning dependencies of target radiation_lib [ 74%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o [ 74%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o [ 74%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o [ 75%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o [ 76%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o [ 76%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o [ 76%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o [ 76%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o [ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o [ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o [ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o [ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o [ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o [ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o [ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o [ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/Numerical_recipes/ran_state.f90:8:59: 8 | INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1 | 1 Warning: Integer outside symmetric range implied by Standard Fortran at (1) [ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o [ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o [ 79%] Linking Fortran static library libnumerical_recipes_lib.a [ 79%] Built target numerical_recipes_lib [ 79%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o [ 79%] Linking Fortran static library libradiation_lib.a [ 79%] Built target radiation_lib Scanning dependencies of target input_fields_lib [ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1469:21: 1469 | if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1 | 1 Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1491:18: 1491 | if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1 | 1 Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1037:15: 1037 | if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1039:15: 1039 | if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1041:15: 1041 | if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1044:15: 1044 | if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1046:15: 1046 | if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1048:15: 1048 | if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:355:13: 355 | if( ANY(Ts_in == 0.0) ) then | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:619:12: 619 | if(T_in(i,nlev+1)/=missing_value) then | 1 Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:635:12: 635 | if(T_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:637:12: 637 | if(q_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:639:12: 639 | if(u_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:641:12: 641 | if(v_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:646:15: 646 | if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:650:15: 650 | if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:657:12: 657 | if(ug_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:659:12: 659 | if(vg_in(i,nlev+1)==missing_value) & | 1 Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1251:42: 1251 | character dim_name*( NF90_MAX_NAME ) | 1 Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1253:33: 1253 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1253:43: 1253 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1253:46: 1253 | integer var_ndims, dim_size, dims_set, i, n, var_type | 1 Warning: Unused variable 'i' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1236:60: 1236 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1236:54: 1236 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, & | 1 Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1237:23: 1237 | var, use_NF90_REAL, status, required) | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:1166:67: 1166 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, & | 1 Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:750:51: 750 | get_add_surface_data, ntime, & | 1 Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:749:81: 749 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, & | 1 Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:289:32: 289 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:289:38: 289 | integer :: STATUS, i, n, nlat, nlon | 1 Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:290:19: 290 | integer :: varID, NCID | 1 Warning: Unused variable 'varid' declared at (1) [-Wunused-variable] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/Input_fields/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o [ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | shf_in(:) = missing_value | ^ Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:34: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'shf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | shf_in(:) = missing_value | ^ Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:34: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'shf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:785:28: 785 | shf_in(:) = missing_value | ^ Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:34: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'shf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:786:28: 786 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:45: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:786:28: 786 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:45: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:786:28: 786 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:45: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:786:28: 786 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:45: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:786:28: 786 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:45: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:786:28: 786 | lhf_in(:) = missing_value | ^ Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:45: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'lhf_in' declared here /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:787:31: 787 | tausrf_in(:) = missing_value | ^ Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_core/readiopdata_core_module.F90:760:59: 760 | real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:) | ^ note: 'tausrf_in.dim[0].ubound' was declared here [ 82%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o /home/jenkins/workspace/clubb_silhs_convergence_gfortran/src/readiopdata_module.F90:244:9: 244 | use spec_hum_to_mixing_ratio, only: & | 1 Fatal Error: Cannot open module file 'spec_hum_to_mixing_ratio.mod' for reading at (1): No such file or directory compilation terminated. gmake[2]: *** [src/Input_fields/CMakeFiles/input_fields_lib.dir/build.make:218: src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o] Error 1 gmake[2]: *** Waiting for unfinished jobs.... gmake[1]: *** [CMakeFiles/Makefile2:2002: src/Input_fields/CMakeFiles/input_fields_lib.dir/all] Error 2 gmake: *** [Makefile:146: all] Error 2 [91mBuild failed. See /home/jenkins/workspace/clubb_silhs_convergence_gfortran/build/gcc_PRECdouble/cmake_build_output.txt for details.[0m [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run SILHS test script) Stage "Run SILHS test script" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 2 Finished: FAILURE