-------------------------------------------
ARM: SUCCESS --> Images found.
ARM_97: SUCCESS --> Images found.
ASTEX_A209: SUCCESS --> Images found.
ATEX: SUCCESS --> Images found.
BOMEX: SUCCESS --> Images found.
CGILS_S11: SUCCESS --> Images found.
CGILS_S12: SUCCESS --> Images found.
CGILS_S6: SUCCESS --> Images found.
CLEX9_NOV02: SUCCESS --> Images found.
CLEX9_OCT14: SUCCESS --> Images found.
DYCOMS2_RF01: SUCCESS --> Images found.
DYCOMS2_RF01_FIXED_SST: SUCCESS --> Images found.
DYCOMS2_RF02_DO: SUCCESS --> Images found.
DYCOMS2_RF02_DS: SUCCESS --> Images found.
DYCOMS2_RF02_ND: SUCCESS --> Images found.
DYCOMS2_RF02_SO: SUCCESS --> Images found.
FIRE: SUCCESS --> Images found.
GABLS2: SUCCESS --> Images found.
GABLS2_NIGHTLY: SUCCESS --> Images found.
GABLS3: SUCCESS --> Images found.
GABLS3_NIGHT: SUCCESS --> Images found.
JUN25_ALTOCU: SUCCESS --> Images found.
LBA: SUCCESS --> Images found.
MC3E: SUCCESS --> Images found.
MPACE_A: SUCCESS --> Images found.
MPACE_B: SUCCESS --> Images found.
MPACE_B_SILHS: SUCCESS --> Images found.
NOV11_ALTOCU: SUCCESS --> Images found.
RICO: SUCCESS --> Images found.
RICO_SILHS: SUCCESS --> Images found.
TWP_ICE: SUCCESS --> Images found.
WANGARA: SUCCESS --> Images found.
-------------------------------------------
Output can be viewed at file:///home/jenkins/workspace/clubb_plots/6e48f97_vs_master_09499c4/index.html with a web browser
Pyplotgen ran in 80 seconds.
See error.log in the output folder for detailed info including warnings.
error.log messages include:
26-10-18 04:44:32.180 proc_id: 1435306 Warning, unknown model detected. PyPlotgen doesn't know where this netcdf dependent_data is from. <class 'netCDF4.Dataset'>
[Pipeline] sh
+ ssh carson 'mkdir -p /home/pub/web_plots/clubb_ifort_plots/master'
[Pipeline] sh
+ scp -r 6e48f97_vs_master_09499c4 carson:/home/pub/web_plots/clubb_ifort_plots/master
[Pipeline] sh
+ ssh carson '/home/pub/web_plots/generate_plot_directory_page.py /home/pub/web_plots/clubb_ifort_plots/'
/home/pub/web_plots/clubb_ifort_plots/ updated successfully.
[Pipeline] sh
+ rm -rf cur_out
[Pipeline] sh
+ mkdir cur_out
[Pipeline] sh
+ mv cpu_6e48f97 cur_out
[Pipeline] sh
+ echo 6e48f97
[Pipeline] sh
+ ssh carson 'rm -rf /home/pub/web_plots/clubb_ifort_plots/master/cur_out'
[Pipeline] sh
+ scp -r cur_out carson:/home/pub/web_plots/clubb_ifort_plots/master/
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
COMPLETE -- arm
COMPLETE -- atex
COMPLETE -- bomex
COMPLETE -- dycoms2_rf01
COMPLETE -- dycoms2_rf01_fixed_sst
COMPLETE -- dycoms2_rf02_ds
COMPLETE -- dycoms2_rf02_nd
COMPLETE -- mpace_b
COMPLETE -- rico
COMPLETE -- wangara
COMPLETE -- arm_97
COMPLETE -- cgils_s6
COMPLETE -- cgils_s11
COMPLETE -- cgils_s12
COMPLETE -- gabls3_night
COMPLETE -- lba
COMPLETE -- twp_ice
=================== Runs Complete ===================
All cases ran to completion.
+ mv output gpu_6e48f97
+ mkdir output
[Pipeline] }
Lock released on resource [Resource: GPU_built-in]
[Pipeline] // lock
[Pipeline] sh
+ scp -r carson:/home/pub/web_plots/clubb_nvhpc_gpu_plots/master/cur_out .
[Pipeline] sh
++ cat cur_out/commit
+ python postprocessing/pyplotgen/pyplotgen.py -les -clubb cpu_6e48f97 cur_out/cpu_09499c4 gpu_6e48f97 cur_out/gpu_09499c4 -output_dir 6e48f97_vs_master_09499c4
Installing uv 0.11.32 in /home/jenkins/workspace/clubb_plots@2/.clubb-python-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_plots@2/.clubb-python-tools/bin
uv
uvx
everything's installed!
Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_plots@2/.venv-python
Downloading cpython-3.12.13-linux-x86_64-gnu (download) (32.6MiB)
Downloaded cpython-3.12.13-linux-x86_64-gnu (download)
Using CPython 3.12.13
Creating virtual environment at: .venv-python
Activate with: source .venv-python/bin/activate
Installing plot requirements into /home/jenkins/workspace/clubb_plots@2/.venv-python
Using Python 3.12.13 environment at: .venv-python
Resolved 25 packages in 2.93s
Building fpdf==1.7.2
Downloading pygments (1.2MiB)
Downloading cftime (1.6MiB)
Downloading numpy (16.0MiB)
Downloading meson (1.1MiB)
Downloading pillow (6.6MiB)
Downloading fonttools (5.2MiB)
Downloading pandas (10.3MiB)
Downloading netcdf4 (10.1MiB)
Downloading kiwisolver (1.4MiB)
Downloading matplotlib (8.4MiB)
Downloading opencv-python-headless (59.1MiB)
Built fpdf==1.7.2
Downloaded kiwisolver
Downloaded cftime
Downloaded meson
Downloaded pygments
Downloaded pillow
Downloaded fonttools
Downloaded netcdf4
Downloaded matplotlib
Downloaded numpy
Downloaded opencv-python-headless
Downloaded pandas
Prepared 25 packages in 2.88s
Installed 25 packages in 75ms
+ certifi==2026.7.22
+ cftime==1.6.6.1
+ contourpy==1.4.0
+ cycler==0.12.1
+ fonttools==4.67.0
+ fpdf==1.7.2
+ iniconfig==2.3.1
+ kiwisolver==1.5.1
+ matplotlib==3.10.9
+ meson==1.12.1
+ netcdf4==1.7.5
+ ninja==1.13.2
+ numpy==2.5.4
+ opencv-python-headless==4.14.0.94
+ packaging==26.3
+ pandas==3.0.6
+ pillow==12.3.0
+ pluggy==1.7.0
+ pygments==2.21.0
+ pyparsing==3.3.3
+ pytest==9.1.1
+ python-dateutil==2.9.0.post0
+ seaborn==0.13.2
+ six==1.17.0
+ tabulate==0.10.0
Ready: /home/jenkins/workspace/clubb_plots@2/.venv-python/bin/python
/home/jenkins/workspace/clubb_plots@2/postprocessing/pyplotgen/config/VariableGroupBase.py:480: SyntaxWarning: invalid escape sequence '\m'
'axis_title': 'bv_freq_sqd [$\mathrm{1/s^2}$]',
/home/jenkins/workspace/clubb_plots@2/postprocessing/pyplotgen/config/VariableGroupBase.py:496: SyntaxWarning: invalid escape sequence '\m'
'axis_title': 'bv_freq_sqd_splat [$\mathrm{1/s^2}$]',
/home/jenkins/workspace/clubb_plots@2/postprocessing/pyplotgen/src/interoperability.py:41: SyntaxWarning: invalid escape sequence '\$'
return re.sub("\$[^$]*\$",'',string)
/home/jenkins/workspace/clubb_plots@2/postprocessing/pyplotgen/src/DataReader.py:590: SyntaxWarning: invalid escape sequence '\m'
units = "$\mathrm{" + raw_units + "}$" # $'s are used to format equations
*******************************************
Welcome to PyPlotGen.
*******************************************
Checking for model benchmark output...
Benchmark output found in /home/jenkins/workspace/clubb_plots@2/input/les_and_clubb_benchmark_runs/.
-------------------------------------------
Running...
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-------------------------------------------
ARM: SUCCESS --> Images found.
ARM_97: SUCCESS --> Images found.
ATEX: SUCCESS --> Images found.
BOMEX: SUCCESS --> Images found.
CGILS_S11: SUCCESS --> Images found.
CGILS_S12: SUCCESS --> Images found.
CGILS_S6: SUCCESS --> Images found.
DYCOMS2_RF01: SUCCESS --> Images found.
DYCOMS2_RF01_FIXED_SST: SUCCESS --> Images found.
DYCOMS2_RF02_DS: SUCCESS --> Images found.
DYCOMS2_RF02_ND: SUCCESS --> Images found.
GABLS3_NIGHT: SUCCESS --> Images found.
LBA: SUCCESS --> Images found.
MPACE_B: SUCCESS --> Images found.
RICO: SUCCESS --> Images found.
TWP_ICE: SUCCESS --> Images found.
WANGARA: SUCCESS --> Images found.
-------------------------------------------
Output can be viewed at file:///home/jenkins/workspace/clubb_plots@2/6e48f97_vs_master_09499c4/index.html with a web browser
Pyplotgen ran in 139 seconds.
See error.log in the output folder for detailed info including warnings.
error.log messages include:
26-10-18 04:59:03.348 proc_id: 1471090 Warning, unknown model detected. PyPlotgen doesn't know where this netcdf dependent_data is from. <class 'netCDF4.Dataset'>
[Pipeline] sh
+ ssh carson 'mkdir -p /home/pub/web_plots/clubb_nvhpc_gpu_plots/master'
[Pipeline] sh
+ scp -r 6e48f97_vs_master_09499c4 carson:/home/pub/web_plots/clubb_nvhpc_gpu_plots/master
[Pipeline] sh
+ ssh carson '/home/pub/web_plots/generate_plot_directory_page.py /home/pub/web_plots/clubb_nvhpc_gpu_plots/'
/home/pub/web_plots/clubb_nvhpc_gpu_plots/ updated successfully.
[Pipeline] sh
+ rm -rf cur_out
[Pipeline] sh
+ mkdir cur_out
[Pipeline] sh
+ mv cpu_6e48f97 gpu_6e48f97 cur_out
[Pipeline] sh
+ echo 6e48f97
[Pipeline] sh
+ ssh carson 'rm -rf /home/pub/web_plots/clubb_nvhpc_gpu_plots/master/cur_out'
[Pipeline] sh
+ scp -r cur_out carson:/home/pub/web_plots/clubb_nvhpc_gpu_plots/master/
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
COMPLETE -- bomex
COMPLETE -- atex
COMPLETE -- dycoms2_rf01
COMPLETE -- arm
COMPLETE -- clex9_oct14
COMPLETE -- dycoms2_rf01_fixed_sst
COMPLETE -- dycoms2_rf02_do
COMPLETE -- dycoms2_rf02_nd
COMPLETE -- dycoms2_rf02_so
COMPLETE -- dycoms2_rf02_ds
COMPLETE -- fire
COMPLETE -- gabls3_night
COMPLETE -- gabls2
COMPLETE -- jun25_altocu
COMPLETE -- neutral
COMPLETE -- nov11_altocu
COMPLETE -- lba
COMPLETE -- wangara
COMPLETE -- rico_silhs
COMPLETE -- rico
=================== Runs Complete ===================
All cases ran to completion.
+ python3 postprocessing/pyplotgen/pyplotgen.py -les -clubb output/jax_vs_fortran/fortran_6e48f97 output/jax_vs_fortran/jax_6e48f97 -output_dir output/6e48f97_jax_vs_fortran
Installing uv 0.11.32 in /home/jenkins/workspace/clubb_plots/.clubb-python-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_plots/.clubb-python-tools/bin
uv
uvx
everything's installed!
Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_plots/.venv-python
Using CPython 3.12.3 interpreter at: /usr/bin/python3.12
Creating virtual environment at: .venv-python
Activate with: source .venv-python/bin/activate
Installing plot requirements into /home/jenkins/workspace/clubb_plots/.venv-python
Using Python 3.12.3 environment at: .venv-python
Resolved 25 packages in 2.66s
Building fpdf==1.7.2
Downloading fonttools (5.2MiB)
Downloading kiwisolver (1.4MiB)
Downloading pygments (1.2MiB)
Downloading pandas (10.3MiB)
Downloading pillow (6.6MiB)
Downloading cftime (1.6MiB)
Downloading opencv-python-headless (59.1MiB)
Downloading netcdf4 (10.1MiB)
Downloading matplotlib (8.4MiB)
Downloading numpy (16.0MiB)
Downloading meson (1.1MiB)
Built fpdf==1.7.2
Downloaded kiwisolver
Downloaded cftime
Downloaded meson
Downloaded pygments
Downloaded fonttools
Downloaded pillow
Downloaded matplotlib
Downloaded netcdf4
Downloaded pandas
Downloaded numpy
Downloaded opencv-python-headless
Prepared 25 packages in 6.30s
Installed 25 packages in 435ms
+ certifi==2026.7.22
+ cftime==1.6.6.1
+ contourpy==1.4.0
+ cycler==0.12.1
+ fonttools==4.67.0
+ fpdf==1.7.2
+ iniconfig==2.3.1
+ kiwisolver==1.5.1
+ matplotlib==3.10.9
+ meson==1.12.1
+ netcdf4==1.7.5
+ ninja==1.13.2
+ numpy==2.5.4
+ opencv-python-headless==4.14.0.94
+ packaging==26.3
+ pandas==3.0.6
+ pillow==12.3.0
+ pluggy==1.7.0
+ pygments==2.21.0
+ pyparsing==3.3.3
+ pytest==9.1.1
+ python-dateutil==2.9.0.post0
+ seaborn==0.13.2
+ six==1.17.0
+ tabulate==0.10.0
Ready: /home/jenkins/workspace/clubb_plots/.venv-python/bin/python
/home/jenkins/workspace/clubb_plots/postprocessing/pyplotgen/config/VariableGroupBase.py:480: SyntaxWarning: invalid escape sequence '\m'
'axis_title': 'bv_freq_sqd [$\mathrm{1/s^2}$]',
/home/jenkins/workspace/clubb_plots/postprocessing/pyplotgen/config/VariableGroupBase.py:496: SyntaxWarning: invalid escape sequence '\m'
'axis_title': 'bv_freq_sqd_splat [$\mathrm{1/s^2}$]',
/home/jenkins/workspace/clubb_plots/postprocessing/pyplotgen/src/interoperability.py:41: SyntaxWarning: invalid escape sequence '\$'
return re.sub("\$[^$]*\$",'',string)
/home/jenkins/workspace/clubb_plots/postprocessing/pyplotgen/src/DataReader.py:590: SyntaxWarning: invalid escape sequence '\m'
units = "$\mathrm{" + raw_units + "}$" # $'s are used to format equations
*******************************************
Welcome to PyPlotGen.
*******************************************
Checking for model benchmark output...
Benchmark output found in /home/jenkins/workspace/clubb_plots/input/les_and_clubb_benchmark_runs/.
-------------------------------------------
Running...
----------
NOTE: If processing multiple cases (ARM, BOMEX, etc.) with multithreading,
the total number of panels to be processed may increase as threads complete
and begin processing new cases.
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-------------------------------------------
ARM: SUCCESS --> Images found.
ATEX: SUCCESS --> Images found.
BOMEX: SUCCESS --> Images found.
CLEX9_OCT14: SUCCESS --> Images found.
DYCOMS2_RF01: SUCCESS --> Images found.
DYCOMS2_RF01_FIXED_SST: SUCCESS --> Images found.
DYCOMS2_RF02_DO: SUCCESS --> Images found.
DYCOMS2_RF02_DS: SUCCESS --> Images found.
DYCOMS2_RF02_ND: SUCCESS --> Images found.
DYCOMS2_RF02_SO: SUCCESS --> Images found.
FIRE: SUCCESS --> Images found.
GABLS2: SUCCESS --> Images found.
GABLS2_NIGHTLY: SUCCESS --> Images found.
GABLS3_NIGHT: SUCCESS --> Images found.
JUN25_ALTOCU: SUCCESS --> Images found.
LBA: SUCCESS --> Images found.
NEUTRAL: SUCCESS --> Images found.
NOV11_ALTOCU: SUCCESS --> Images found.
RICO: SUCCESS --> Images found.
RICO_SILHS: SUCCESS --> Images found.
WANGARA: SUCCESS --> Images found.
-------------------------------------------
Output can be viewed at file:///home/jenkins/workspace/clubb_plots/output/6e48f97_jax_vs_fortran/index.html with a web browser
Pyplotgen ran in 175 seconds.
See error.log in the output folder for detailed info including warnings.
error.log messages include:
26-10-18 05:40:45.873 proc_id: 1557683 Warning, unknown model detected. PyPlotgen doesn't know where this netcdf dependent_data is from. <class 'netCDF4.Dataset'>
[Pipeline] sh
+ ssh carson 'mkdir -p /home/pub/web_plots/clubb_jax_plots/master'
[Pipeline] sh
+ scp -r output/6e48f97_jax_vs_fortran carson:/home/pub/web_plots/clubb_jax_plots/master
[Pipeline] sh
+ ssh carson '/home/pub/web_plots/generate_plot_directory_page.py /home/pub/web_plots/clubb_jax_plots/'
/home/pub/web_plots/clubb_jax_plots/ updated successfully.
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] End of Pipeline
Finished: SUCCESS
