Started by an SCM change Obtained jenkins_tests/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 01902a482d8d51667174e18551fad475b57dc98c (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 01902a482d8d51667174e18551fad475b57dc98c # timeout=10 Commit message: "fixed compiler warning regarding w_up_in_cloud" > git rev-list --no-walk 1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Clone SysAdmin to tmp) [Pipeline] sh + rm -rf /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin + git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin Cloning into '/home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin'... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + python3 /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_gfdlact.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2518:32: 2518 | subroutine init_parameters_999( & | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23: 132 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_param.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_lapack.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libmicrophys_utils.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_parabolic.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_KK_microphys.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_coamps.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62: 633 | do category=1, num_importance_categories | 2 ...... 638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_bugsrad.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:323:13: 323 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libsilhs.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_morrison.a ../src/Benchmark_cases/cloud_sed_module.F90:168:44: 168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then | 1 Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_other.a ../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8: 24 | use clubb_precision, only: & | 1 Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23: 132 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:323:13: 323 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ../src/Benchmark_cases/cloud_sed_module.F90:168:44: 168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then | 1 Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] ../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8: 24 | use clubb_precision, only: & | 1 Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/01902a482d8d51667174e18551fad475b57dc98c. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! =============================== Configuring Test =============================== Working directory set to: . Trying to clone repo... Cloned repo location: /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo Output Save Mode: last Using branch: master Commits to test vs the baseline (1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306) 799c0393e23eee22258c13af0e96935686b16b36 92c6ab41532c58e19b7c85a05eef3d0b757c50eb f5e493c6e8ef60db7ebbb4d7b1ef1ec23ba8ecfc 75f1efd4a511876d6f5360b2f57612078e53e404 2ea67437129473d2b37023cbef1bbc9cf0977138 a4edc266802c743ff21a4aebfb4fa66a12b1f637 8d4a3468adee056d1caababc8aa2089070264e13 dc4d9fa8d3688a4b970446cd4b29ef3f75d2a63f 1cd8308e503d9d5ef88d759371fbf901845b77f8 b98df1d99fb3d70d496f49cf3b812c8a246c1bb8 30b7ce12c340f7124e5db42ff53794d823c095d5 49c2984d69af2adda36fb151146393decc215dc4 939fbbd0b0c6bc00fcce8cfce0f306e84c3155a7 941bd8bf1754b9713959c62a75a82280fff554e8 01902a482d8d51667174e18551fad475b57dc98c Making list from 'UnresolvedCommits': - 1c59a5018700023f704a46b68ad581445427d51f - e33002f85d35ee72f9b155437f36e9c103765cc3 - f7cd1d8ccc310129bfb3ceb243b0c47284eaccf5 - 202f78110b0f343f565b8ac1ea633ded7b27ee11 - df3b263c7525b030ed469116534560eb74ae8ddf Run Output Path: repo/output Run commands: ['repo/compile/compile.bash', '\nrm -rf repo/output', 'mkdir repo/output', '\ncp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters', '\nrepo/run_scripts/run_scm_all.bash --min-cases'] Diffing command: repo/run_scripts/run_bindiff_all.bash =============================== Running Test =============================== Parsing message from commit: 799c0393e23eee22258c13af0e96935686b16b36 Parsing message from commit: 92c6ab41532c58e19b7c85a05eef3d0b757c50eb Parsing message from commit: f5e493c6e8ef60db7ebbb4d7b1ef1ec23ba8ecfc Parsing message from commit: 75f1efd4a511876d6f5360b2f57612078e53e404 Parsing message from commit: 2ea67437129473d2b37023cbef1bbc9cf0977138 Parsing message from commit: a4edc266802c743ff21a4aebfb4fa66a12b1f637 Parsing message from commit: 8d4a3468adee056d1caababc8aa2089070264e13 Parsing message from commit: dc4d9fa8d3688a4b970446cd4b29ef3f75d2a63f Parsing message from commit: 1cd8308e503d9d5ef88d759371fbf901845b77f8 Parsing message from commit: b98df1d99fb3d70d496f49cf3b812c8a246c1bb8 Parsing message from commit: 30b7ce12c340f7124e5db42ff53794d823c095d5 Parsing message from commit: 49c2984d69af2adda36fb151146393decc215dc4 Parsing message from commit: 939fbbd0b0c6bc00fcce8cfce0f306e84c3155a7 Parsing message from commit: 941bd8bf1754b9713959c62a75a82280fff554e8 Parsing message from commit: 01902a482d8d51667174e18551fad475b57dc98c Checking Commit: 799c0393e23eee22258c13af0e96935686b16b36 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 92c6ab41532c58e19b7c85a05eef3d0b757c50eb Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: f5e493c6e8ef60db7ebbb4d7b1ef1ec23ba8ecfc Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 75f1efd4a511876d6f5360b2f57612078e53e404 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 2ea67437129473d2b37023cbef1bbc9cf0977138 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: a4edc266802c743ff21a4aebfb4fa66a12b1f637 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 8d4a3468adee056d1caababc8aa2089070264e13 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: dc4d9fa8d3688a4b970446cd4b29ef3f75d2a63f Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 1cd8308e503d9d5ef88d759371fbf901845b77f8 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: b98df1d99fb3d70d496f49cf3b812c8a246c1bb8 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 30b7ce12c340f7124e5db42ff53794d823c095d5 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 49c2984d69af2adda36fb151146393decc215dc4 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 939fbbd0b0c6bc00fcce8cfce0f306e84c3155a7 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 941bd8bf1754b9713959c62a75a82280fff554e8 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 01902a482d8d51667174e18551fad475b57dc98c Running: final commit to check, not labelled BIT_CHANGING Checking out 01902a482d8d51667174e18551fad475b57dc98c Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Checking out 1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Diffing: 'repo/run_scripts/run_bindiff_all.bash 01902a482d8d51667174e18551fad475b57dc98c 1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306' =============================== Test Results =============================== Commit Range Checked = 1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306...01902a482d8d51667174e18551fad475b57dc98c No new Unresolved commits found. No fake BIT_CHANGING commits found. Remaining Unresolved Commits (oldest commit is listed first): 1c59a5018700023f704a46b68ad581445427d51f e33002f85d35ee72f9b155437f36e9c103765cc3 f7cd1d8ccc310129bfb3ceb243b0c47284eaccf5 202f78110b0f343f565b8ac1ea633ded7b27ee11 df3b263c7525b030ed469116534560eb74ae8ddf =============================== Updating Config File =============================== Saving into UnresolvedCommits: 1c59a5018700023f704a46b68ad581445427d51f e33002f85d35ee72f9b155437f36e9c103765cc3 f7cd1d8ccc310129bfb3ceb243b0c47284eaccf5 202f78110b0f343f565b8ac1ea633ded7b27ee11 df3b263c7525b030ed469116534560eb74ae8ddf Saving into BaselineCommit: 01902a482d8d51667174e18551fad475b57dc98c =============================== Cleanup =============================== Removed repo. Removing all but final generated output. REMOVING: 1c77ed3f85d66c5ec3818b2e146a5cc95bbcf306 RENAMING 01902a482d8d51667174e18551fad475b57dc98c to latest_revision_validated_01902a482d8d51667174e18551fad475b57dc98c ================== Unresolved Commit Status ================== Remaining Unresolved Commits (oldest commit is listed first): 1c59a5018700023f704a46b68ad581445427d51f e33002f85d35ee72f9b155437f36e9c103765cc3 f7cd1d8ccc310129bfb3ceb243b0c47284eaccf5 202f78110b0f343f565b8ac1ea633ded7b27ee11 df3b263c7525b030ed469116534560eb74ae8ddf Exiting with code: 1 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE