Console Output

+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7,
netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ bash clubb_python_api/run_pytests.sh -v
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-9.0.3, pluggy-1.6.0 -- /usr/bin/python3
cachedir: .pytest_cache
rootdir: /home/jenkins/workspace/clubb_python_test/clubb_python_api
collecting ... collected 226 items

tests/test_advance_core_subs.py::TestComputeSigmaSqdW::test_basic_call PASSED [  0%]
tests/test_advance_core_subs.py::TestComputeSigmaSqdW::test_sigma_bounded PASSED [  0%]
tests/test_advance_core_subs.py::TestComputeSigmaSqdW::test_zero_variance PASSED [  1%]
tests/test_advance_core_subs.py::TestFillHolesVertical::test_no_holes PASSED [  1%]
tests/test_advance_core_subs.py::TestFillHolesVertical::test_fills_negative PASSED [  2%]
tests/test_advance_core_subs.py::TestFillHolesWp2FromHorzTke::test_fills_wp2_and_conserves_tke PASSED [  2%]
tests/test_advance_core_subs.py::TestClipRcm::test_rcm_clipped_to_rtm PASSED [  3%]
tests/test_advance_core_subs.py::TestClipRcm::test_negative_rcm_unchanged PASSED [  3%]
tests/test_advance_core_subs.py::TestClipRcm::test_valid_rcm_unchanged PASSED [  3%]
tests/test_advance_core_subs.py::TestClipCovar::test_basic_call PASSED   [  4%]
tests/test_advance_core_subs.py::TestClipCovar::test_clips_excess_covariance PASSED [  4%]
tests/test_advance_core_subs.py::TestClipSkewness::test_clip_skewness_limits_wp3 PASSED [  5%]
tests/test_advance_core_subs.py::TestClipVariance::test_clips_to_threshold PASSED [  5%]
tests/test_advance_core_subs.py::TestClipVariance::test_above_threshold_unchanged PASSED [  6%]
tests/test_advance_core_subs.py::TestBruntVaisala::test_basic_call PASSED [  6%]
tests/test_advance_core_subs.py::TestBruntVaisala::test_stable_positive_n2 PASSED [  7%]
tests/test_advance_core_subs.py::TestCxFncRichardson::test_basic_call PASSED [  7%]
tests/test_advance_core_subs.py::TestStabilityCorrection::test_basic_call PASSED [  7%]
tests/test_advance_core_subs.py::TestStabilityCorrection::test_nonnegative PASSED [  8%]
tests/test_advance_core_subs.py::TestClipCovarsDenom::test_basic_call PASSED [  8%]
tests/test_argument_contract_audit.py::test_argument_order_checker_finds_no_issues PASSED [  9%]
tests/test_call_tree_advance_core.py::test_advance_clubb_core_returns_finite_arrays