Started by an SCM change Obtained jenkins_tests/clubb_cmake_test/Jenkinsfile from git https://github.com/larson-group/clubb.git [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on nelson in /home/jenkins/workspace/clubb_cmake_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/jenkins/workspace/clubb_cmake_test/.git # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 7b5214a7a0382d3b5d2df0f7b8a8f11bd11f4bdb (refs/remotes/origin/master) Commit message: "Clubb organization part2 (#1304)" > git config core.sparsecheckout # timeout=10 > git checkout -f 7b5214a7a0382d3b5d2df0f7b8a8f11bd11f4bdb # timeout=10 > git rev-list --no-walk f6869b072b6d6628b04508169a17c757c2ebddc5 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Compile gfortran) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + ./compile.py -run_tests -- Compiling with double precision -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/include -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_cmake_test/build/gcc_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_cmake_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test/build/gcc_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble about to cmnake /home/jenkins/workspace/clubb_cmake_test/build/gcc_PRECdouble Running CMake configure... Scanning dependencies of target clubb_lapack_shared Scanning dependencies of target scm_activation_lib [ 0%] Built target clubb_lapack_shared [ 0%] Built target scm_activation_lib Scanning dependencies of target clubb_lapack_single Scanning dependencies of target clubb_lapack_double [ 18%] Built target clubb_lapack_single [ 37%] Built target clubb_lapack_double [ 37%] Built target lapack_lib Scanning dependencies of target clubb_core_lib [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_windm_edsclrm_module.F90:50:78: 50 | order_xp2_xpyp, order_wp2_wp3, order_windm, & | 1 Warning: Unused dummy argument 'order_windm' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_windm_edsclrm_module.F90:50:65: 50 | order_xp2_xpyp, order_wp2_wp3, order_windm, & | 1 Warning: Unused dummy argument 'order_wp2_wp3' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_windm_edsclrm_module.F90:50:50: 50 | order_xp2_xpyp, order_wp2_wp3, order_windm, & | 1 Warning: Unused dummy argument 'order_xp2_xpyp' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/mixing_length.F90:1110:16: 1110 | if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= & | ^ Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/mixing_length.F90:744:42: 744 | real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1 | ^ note: 'dcape_dz_j' was declared here /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_wp2_wp3_module.F90:1931:12: 1931 | if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then | ^ Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_wp2_wp3_module.F90:1481:20: 1481 | wp2_avg_before, & | ^ note: 'wp2_avg_before' was declared here [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o [ 39%] Linking Fortran static library libclubb_core_lib.a [ 52%] Built target clubb_core_lib Scanning dependencies of target text_writer_lib Scanning dependencies of target microphys_utils_lib Scanning dependencies of target bugsrad_lib Scanning dependencies of target coamps_lib [ 63%] Built target coamps_lib [ 64%] Built target text_writer_lib [ 64%] Built target microphys_utils_lib Scanning dependencies of target morrison_microphys_lib Scanning dependencies of target KK_microphys_lib [ 69%] Built target bugsrad_lib [ 69%] Built target morrison_microphys_lib [ 73%] Built target KK_microphys_lib Scanning dependencies of target silhs_lib [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o /home/jenkins/workspace/clubb_cmake_test/src/SILHS/latin_hypercube_driver_module.F90:1596:10: 1596 | if ( X_u_chi(sample) < (one - cloud_frac_i) ) then | ^ Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized] /home/jenkins/workspace/clubb_cmake_test/src/SILHS/latin_hypercube_driver_module.F90:1578:18: 1578 | cloud_frac_i | ^ note: 'cloud_frac_i' was declared here [ 73%] Linking Fortran static library libsilhs_lib.a [ 76%] Built target silhs_lib Scanning dependencies of target radiation_lib Scanning dependencies of target numerical_recipes_lib [ 79%] Built target numerical_recipes_lib [ 81%] Built target radiation_lib Scanning dependencies of target input_fields_lib [ 84%] Built target input_fields_lib Scanning dependencies of target G_unit_test_lib Scanning dependencies of target benchmark_cases_lib Scanning dependencies of target microphys_lib [ 84%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o [ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o [ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o [ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o [ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o [ 92%] Built target benchmark_cases_lib [ 92%] Linking Fortran static library libG_unit_test_lib.a [ 94%] Built target G_unit_test_lib [ 95%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o [ 96%] Linking Fortran static library libmicrophys_lib.a [ 98%] Built target microphys_lib Scanning dependencies of target G_unit_tests Scanning dependencies of target clubb_driver_lib [ 98%] Linking Fortran executable G_unit_tests [ 99%] Built target clubb_driver_lib Scanning dependencies of target clubb_standalone Scanning dependencies of target clubb_thread_test Scanning dependencies of target clubb_driver_test Scanning dependencies of target clubb_tuner [ 99%] Linking Fortran executable clubb_standalone [ 99%] Linking Fortran executable clubb_thread_test [ 99%] Linking Fortran executable clubb_driver_test [ 99%] Linking Fortran executable clubb_tuner [100%] Built target clubb_thread_test [100%] Built target G_unit_tests [100%] Built target clubb_standalone [100%] Built target clubb_driver_test [100%] Built target clubb_tuner Install the project... -- Install configuration: "Release" -- Up-to-date: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m Running CMake ctests Test project /home/jenkins/workspace/clubb_cmake_test/build/gcc_PRECdouble Start 1: _init_output_dir 1/11 Test #1: _init_output_dir ................. Passed 0.05 sec Start 2: bomex_100iter 2/11 Test #2: bomex_100iter .................... Passed 0.54 sec Start 3: wangara_100iter 3/11 Test #3: wangara_100iter .................. Passed 0.54 sec Start 4: fire_100iter 4/11 Test #4: fire_100iter ..................... Passed 0.66 sec Start 5: atex_100iter 5/11 Test #5: atex_100iter ..................... Passed 1.04 sec Start 6: rico_silhs_100iter 6/11 Test #6: rico_silhs_100iter ............... Passed 0.88 sec Start 7: arm_97_50iter 7/11 Test #7: arm_97_50iter .................... Passed 1.03 sec Start 8: cobra_100iter 8/11 Test #8: cobra_100iter .................... Passed 0.76 sec Start 9: arm_r8029_100iter 9/11 Test #9: arm_r8029_100iter ................ Passed 0.66 sec Start 10: arm_100iter_8col 10/11 Test #10: arm_100iter_8col ................. Passed 0.77 sec Start 11: arm_1000iter_5dt 11/11 Test #11: arm_1000iter_5dt ................. Passed 1.17 sec 100% tests passed, 0 tests failed out of 11 Total Test time (real) = 8.12 sec [92mAll tests passed.[0m [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile gfortran: openmp+debug) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + ./compile.py -debug -openmp -run_tests -- Compiling with double precision -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/include -- OpenMP Fortran support found -- Flags: -fopenmp -- Includes: -- Libraries:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/gcc-13.1.0-ly4g5v5mnoe2su6clyt6sk674bfvfow2/lib64/libgomp.so;/lib/x86_64-linux-gnu/libpthread.a -- Configuring done -- Generating done -- Build files have been written to: /home/jenkins/workspace/clubb_cmake_test/build/gcc_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_cmake_test/cmake/toolchains/linux_x86_64_gcc.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test/build/gcc_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_cmake_test/build/gcc_DEBUG_PRECdouble Running CMake configure... Scanning dependencies of target clubb_lapack_shared Scanning dependencies of target scm_activation_lib Scanning dependencies of target clubb_lapack_single [ 0%] Built target clubb_lapack_shared Scanning dependencies of target clubb_lapack_double [ 34%] Built target clubb_lapack_single [ 37%] Built target clubb_lapack_double [ 37%] Built target scm_activation_lib [ 37%] Built target lapack_lib Scanning dependencies of target clubb_core_lib [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o [ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o [ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_windm_edsclrm_module.F90:50:78: 50 | order_xp2_xpyp, order_wp2_wp3, order_windm, & | 1 Warning: Unused dummy argument 'order_windm' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_windm_edsclrm_module.F90:50:65: 50 | order_xp2_xpyp, order_wp2_wp3, order_windm, & | 1 Warning: Unused dummy argument 'order_wp2_wp3' at (1) [-Wunused-dummy-argument] /home/jenkins/workspace/clubb_cmake_test/src/CLUBB_core/advance_windm_edsclrm_module.F90:50:50: 50 | order_xp2_xpyp, order_wp2_wp3, order_windm, & | 1 Warning: Unused dummy argument 'order_xp2_xpyp' at (1) [-Wunused-dummy-argument] [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o [ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o [ 39%] Linking Fortran static library libclubb_core_lib.a [ 52%] Built target clubb_core_lib Scanning dependencies of target text_writer_lib Scanning dependencies of target bugsrad_lib Scanning dependencies of target coamps_lib Scanning dependencies of target microphys_utils_lib [ 63%] Built target coamps_lib [ 64%] Built target text_writer_lib [ 64%] Built target microphys_utils_lib [ 69%] Built target bugsrad_lib Scanning dependencies of target morrison_microphys_lib Scanning dependencies of target KK_microphys_lib [ 69%] Built target morrison_microphys_lib [ 73%] Built target KK_microphys_lib Scanning dependencies of target silhs_lib [ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o [ 73%] Linking Fortran static library libsilhs_lib.a [ 76%] Built target silhs_lib Scanning dependencies of target numerical_recipes_lib Scanning dependencies of target radiation_lib [ 79%] Built target numerical_recipes_lib [ 81%] Built target radiation_lib Scanning dependencies of target input_fields_lib [ 84%] Built target input_fields_lib Scanning dependencies of target G_unit_test_lib Scanning dependencies of target benchmark_cases_lib Scanning dependencies of target microphys_lib [ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o [ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o [ 84%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o [ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o [ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o [ 92%] Built target benchmark_cases_lib [ 92%] Linking Fortran static library libG_unit_test_lib.a [ 94%] Built target G_unit_test_lib [ 95%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o [ 96%] Linking Fortran static library libmicrophys_lib.a [ 98%] Built target microphys_lib Scanning dependencies of target G_unit_tests Scanning dependencies of target clubb_driver_lib [ 98%] Linking Fortran executable G_unit_tests [ 99%] Built target clubb_driver_lib Scanning dependencies of target clubb_standalone Scanning dependencies of target clubb_driver_test Scanning dependencies of target clubb_tuner Scanning dependencies of target clubb_thread_test [ 99%] Linking Fortran executable clubb_driver_test [ 99%] Linking Fortran executable clubb_standalone [ 99%] Linking Fortran executable clubb_thread_test [ 99%] Linking Fortran executable clubb_tuner [ 99%] Built target G_unit_tests [ 99%] Built target clubb_driver_test [100%] Built target clubb_tuner [100%] Built target clubb_thread_test [100%] Built target clubb_standalone Install the project... -- Install configuration: "Debug" -- Up-to-date: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" -- Installing: /home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_cmake_test/install/gcc_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m Running CMake ctests Test project /home/jenkins/workspace/clubb_cmake_test/build/gcc_DEBUG_PRECdouble Start 1: _init_output_dir 1/11 Test #1: _init_output_dir ................. Passed 0.04 sec Start 2: bomex_100iter 2/11 Test #2: bomex_100iter ....................***Failed 0.38 sec Start 3: wangara_100iter 3/11 Test #3: wangara_100iter ..................***Failed 0.37 sec Start 4: fire_100iter 4/11 Test #4: fire_100iter .....................***Failed 0.40 sec Start 5: atex_100iter 5/11 Test #5: atex_100iter .....................***Failed 0.41 sec Start 6: rico_silhs_100iter 6/11 Test #6: rico_silhs_100iter ...............***Failed 0.40 sec Start 7: arm_97_50iter 7/11 Test #7: arm_97_50iter ....................***Failed 0.56 sec Start 8: cobra_100iter 8/11 Test #8: cobra_100iter ....................***Failed 0.49 sec Start 9: arm_r8029_100iter 9/11 Test #9: arm_r8029_100iter ................***Failed 0.47 sec Start 10: arm_100iter_8col 10/11 Test #10: arm_100iter_8col .................***Failed 0.41 sec Start 11: arm_1000iter_5dt 11/11 Test #11: arm_1000iter_5dt .................***Failed 0.34 sec 9% tests passed, 10 tests failed out of 11 Total Test time (real) = 4.28 sec The following tests FAILED: 2 - bomex_100iter (Failed) 3 - wangara_100iter (Failed) 4 - fire_100iter (Failed) 5 - atex_100iter (Failed) 6 - rico_silhs_100iter (Failed) 7 - arm_97_50iter (Failed) 8 - cobra_100iter (Failed) 9 - arm_r8029_100iter (Failed) 10 - arm_100iter_8col (Failed) 11 - arm_1000iter_5dt (Failed) Errors while running CTest Output from these tests are in: /home/jenkins/workspace/clubb_cmake_test/build/gcc_DEBUG_PRECdouble/Testing/Temporary/LastTest.log Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely. [91mSome tests failed. See ctest output above.[0m [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile ifx) Stage "Compile ifx" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile ifx: single precision) Stage "Compile ifx: single precision" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile nvfortran) Stage "Compile nvfortran" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile nvfortran: openacc) Stage "Compile nvfortran: openacc" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 8 Finished: FAILURE