Started by user Trevor Hancock Checking out git https://github.com/larson-group/clubb.git into /home/jenkins/workspace/clubb_cmake_output_matching_branch@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 to read jenkins_tests/clubb_cmake_output_matching/Jenkinsfile The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_cmake_output_matching_branch@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/remove_perl^{commit} # timeout=10 Checking out Revision 551dc8ee42fffabccdde729dd122e5c54b113740 (refs/remotes/origin/remove_perl) > git config core.sparsecheckout # timeout=10 > git checkout -f 551dc8ee42fffabccdde729dd122e5c54b113740 # timeout=10 Commit message: "Removed perl and references to it" First time build. Skipping changelog. [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/clubb_cmake_output_matching_branch [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_cmake_output_matching_branch # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/remove_perl^{commit} # timeout=10 Checking out Revision 551dc8ee42fffabccdde729dd122e5c54b113740 (refs/remotes/origin/remove_perl) > git config core.sparsecheckout # timeout=10 > git checkout -f 551dc8ee42fffabccdde729dd122e5c54b113740 # timeout=10 Commit message: "Removed perl and references to it" [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Legacy Compile) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load intel netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + compile/compile.bash -c config/linux_x86_64_ifort.bash compile/compile.bash: line 294: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 297: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 300: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 304: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 308: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 312: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 316: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 320: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 324: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 328: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 332: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 335: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 339: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 343: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 347: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 351: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory compile/compile.bash: line 355: /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/mkmf: No such file or directory cd /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/../obj; make -f Make.clubb_param cd /home/jenkins/workspace/clubb_cmake_output_matching_branch/compile/../obj; make -f Make.clubb_gfdlact make[1]: Entering directory '/home/jenkins/workspace/clubb_cmake_output_matching_branch/obj' make[1]: Make.clubb_param: No such file or directory make[1]: *** No rule to make target 'Make.clubb_param'. Stop. make[1]: Leaving directory '/home/jenkins/workspace/clubb_cmake_output_matching_branch/obj' make: *** [Makefile:13: libclubb_param.a] Error 2 make: *** Waiting for unfinished jobs.... make[1]: Entering directory '/home/jenkins/workspace/clubb_cmake_output_matching_branch/obj' make[1]: Make.clubb_gfdlact: No such file or directory make[1]: *** No rule to make target 'Make.clubb_gfdlact'. Stop. make[1]: Leaving directory '/home/jenkins/workspace/clubb_cmake_output_matching_branch/obj' make: *** [Makefile:37: libclubb_gfdlact.a] Error 2 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Legacy Run) Stage "Legacy Run" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (cmake Compile) Stage "cmake Compile" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (cmake Run) Stage "cmake Run" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compare Outputs) Stage "Compare Outputs" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 2 Finished: FAILURE