+ python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32:
2520 | subroutine init_parameters_999( &
| ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23:
139 | hydromet, & ! Unused
| 1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_KK_microphys.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62:
633 | do category=1, num_importance_categories
| 2
......
638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then
| 1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_coamps.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_bugsrad.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:327:13:
327 | rho_ds_zt, & ! Unused
| 1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libsilhs.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_morrison.a
../src/Benchmark_cases/cloud_sed_module.F90:168:44:
168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
| 1
Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination]
../src/KK_microphys_module.F90:43:35:
43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
| 1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_other.a
../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8:
24 | use clubb_precision, only: &
| 1
Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter]
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/ee117e4e991e6afcc9327cf8890439e1f90f86af.
Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/latest_revision_validated_e000e918d50566e48e2e35d43e7c7ad76a0e38cd.
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing arm netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing arm_97 netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing atex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing bomex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf01 netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf02_ds netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing gabls3_night netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing lba netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing rico netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing twp_ice netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing wangara netCDF (*.nc) files
There were no differences detected!
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32:
2520 | subroutine init_parameters_999( &
| ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23:
139 | hydromet, & ! Unused
| 1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:327:13:
327 | rho_ds_zt, & ! Unused
| 1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
../src/KK_microphys_module.F90:43:35:
43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
| 1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/6dff441959e8cdb1eb5c52576309eb27f4f619c1.
Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/ee117e4e991e6afcc9327cf8890439e1f90f86af.
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing arm netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing arm_97 netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing atex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing bomex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf01 netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf02_ds netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing gabls3_night netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing lba netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing rico netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing twp_ice netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing wangara netCDF (*.nc) files
There were no differences detected!
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace
Trying to clone repo...
Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo
Output Save Mode: last
Using branch: master
Commits to test vs the baseline (e000e918d50566e48e2e35d43e7c7ad76a0e38cd)
ee117e4e991e6afcc9327cf8890439e1f90f86af
6dff441959e8cdb1eb5c52576309eb27f4f619c1
Making list from 'UnresolvedCommits':
Run Output Path: repo/output
Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases']
Diffing command: repo/run_scripts/run_bindiff_all.bash
=============================== Running Test ===============================
Parsing message from commit: ee117e4e991e6afcc9327cf8890439e1f90f86af
Parsing message from commit: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Found: BIT_CHANGING
Checking Commit: ee117e4e991e6afcc9327cf8890439e1f90f86af
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Checking out ee117e4e991e6afcc9327cf8890439e1f90f86af
Running: 'repo/compile/compile.bash'
Running: 'rm -rf repo/output'
Running: 'mkdir repo/output'
Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
Output from e000e918d50566e48e2e35d43e7c7ad76a0e38cd already saved
Diffing: 'repo/run_scripts/run_bindiff_all.bash ee117e4e991e6afcc9327cf8890439e1f90f86af latest_revision_validated_e000e918d50566e48e2e35d43e7c7ad76a0e38cd'
Checking out 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Running: 'repo/compile/compile.bash'
Running: 'rm -rf repo/output'
Running: 'mkdir repo/output'
Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
Output from ee117e4e991e6afcc9327cf8890439e1f90f86af already saved
Diffing: 'repo/run_scripts/run_bindiff_all.bash 6dff441959e8cdb1eb5c52576309eb27f4f619c1 ee117e4e991e6afcc9327cf8890439e1f90f86af'
[33m WARNING: commit '6dff441959e8cdb1eb5c52576309eb27f4f619c1' was supposed to be BIT_CHANGING, but is not.[0m
=============================== Test Results ===============================
Commit Range Checked = e000e918d50566e48e2e35d43e7c7ad76a0e38cd...6dff441959e8cdb1eb5c52576309eb27f4f619c1
No new Unresolved commits found.
Fake BIT_CHANGING Commits:
6dff441959e8cdb1eb5c52576309eb27f4f619c1
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Saving into BaselineCommit: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
=============================== Cleanup ===============================
Removed repo.
Removing all but final generated output.
REMOVING: e000e918d50566e48e2e35d43e7c7ad76a0e38cd
REMOVING: ee117e4e991e6afcc9327cf8890439e1f90f86af
RENAMING 6dff441959e8cdb1eb5c52576309eb27f4f619c1 to latest_revision_validated_6dff441959e8cdb1eb5c52576309eb27f4f619c1
================== Unresolved Commit Status ==================
No remaining Unresolved Commits.
Exiting with code: 0
