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+ python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/penta_lu_solver.F90:131:22:

  131 |     integer :: i, k, j    ! Loop variables
      |                      1
Warning: Unused variable ‘j’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/saturation.F90:1371:10:

 1371 |       rsat
      |          1
Warning: Unused variable ‘rsat’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/saturation.F90:852:8:

  852 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter ‘ep’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/saturation.F90:877:16:

  877 |     integer :: i, k  ! Loop indices
      |                1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/saturation.F90:877:19:

  877 |     integer :: i, k  ! Loop indices
      |                   1
Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/saturation.F90:1072:32:

 1072 |   subroutine sat_vapor_press_ice( nz, ngrdcol, T_in_K, &
      |                                ^
Warning: ‘sat_vapor_press_ice’ defined but not used [-Wunused-function]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/lapack_wrap.F90:239:16:

  239 |       subd, diag, supd
      |                1
Warning: Unused variable ‘diag’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/lapack_wrap.F90:239:10:

  239 |       subd, diag, supd
      |          1
Warning: Unused variable ‘subd’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/lapack_wrap.F90:239:22:

  239 |       subd, diag, supd
      |                      1
Warning: Unused variable ‘supd’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:546:16:

  546 |     integer :: i
      |                1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:438:16:

  438 |     integer :: i
      |                1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:224:16:

  224 |     integer :: i
      |                1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:167:24:

  167 |                 old_soln,                         & ! Intent(in)
      |                        1
Warning: Unused dummy argument ‘old_soln’ at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:165:26:

  165 |                 solve_name, penta_solve_method,   & ! Intent(in)
      |                          1
Warning: Unused dummy argument ‘solve_name’ at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:106:16:

  106 |     integer :: i
      |                1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:50:24:

   50 |                 old_soln,                       & ! Intent(in)
      |                        1
Warning: Unused dummy argument ‘old_soln’ at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:48:26:

   48 |                 solve_name, penta_solve_method, & ! Intent(in)
      |                          1
Warning: Unused dummy argument ‘solve_name’ at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:2237:8:

 2237 |     use clubb_precision, only: &
      |        1
Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1887:38:

 1887 |     real( kind = core_rknd ) :: factor
      |                                      1
Warning: Unused variable ‘factor’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1360:8:

 1360 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter ‘fstdout’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1356:8:

 1356 |     use model_flags, only: &
      |        1
Warning: Unused parameter ‘l_cubic_interp’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1356:8:

 1356 |     use model_flags, only: &
      |        1
Warning: Unused module variable ‘l_quintic_poly_interp’ which has been explicitly imported at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1312:8:

 1312 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter ‘fstdout’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1308:8:

 1308 |     use model_flags, only: &
      |        1
Warning: Unused parameter ‘l_cubic_interp’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1308:8:

 1308 |     use model_flags, only: &
      |        1
Warning: Unused module variable ‘l_quintic_poly_interp’ which has been explicitly imported at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1208:8:

 1208 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter ‘fstdout’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1204:8:

 1204 |     use model_flags, only: &
      |        1
Warning: Unused parameter ‘l_cubic_interp’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1204:8:

 1204 |     use model_flags, only: &
      |        1
Warning: Unused module variable ‘l_quintic_poly_interp’ which has been explicitly imported at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1162:8:

 1162 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter ‘fstdout’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1158:8:

 1158 |     use model_flags, only: &
      |        1
Warning: Unused parameter ‘l_cubic_interp’ which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/grid_class.F90:1158:8:

 1158 |     use model_flags, only: &
      |        1
Warning: Unused module variable ‘l_quintic_poly_interp’ which has been explicitly imported at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/parameters_tunable.F90:440:19:

  440 |     integer :: k, i    ! loop variable
      |                   1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2096:32:

 2096 |   subroutine init_parameters_999( &
      |                                ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
Assembler messages:
Fatal error: can't create precipitation_fraction.o: No such file or directory
make[1]: *** [Make.clubb_param:132: precipitation_fraction.o] Error 1
make[1]: *** Waiting for unfinished jobs....
Assembler messages:
Fatal error: can't create stats_zm_module.o: No such file or directory
make[1]: *** [Make.clubb_param:164: stats_zm_module.o] Error 1
Assembler messages:
Fatal error: can't create parameters_tunable.o: No such file or directory
make[1]: *** [Make.clubb_param:120: parameters_tunable.o] Error 1
Assembler messages:
Fatal error: can't create pdf_parameter_module.o: No such file or directory
make[1]: *** [Make.clubb_param:124: pdf_parameter_module.o] Error 1
Assembler messages:
Fatal error: can't create stats_zt_module.o: No such file or directory
make[1]: *** [Make.clubb_param:166: stats_zt_module.o] Error 1
make: *** [Makefile:14: libclubb_param.a] Error 2
mkdir: cannot create directory ‘repo/output’: No such file or directory

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo

Output Save Mode: none

Using branch: master

Making list from 'UnresolvedCommits':
	- 6a1ad520c171e5f5eb8cc1c590e1405459574dd6

Run Output Path: repo/output

Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases']

Diffing command: repo/run_scripts/run_bindiff_all.bash

=============================== Running Test ===============================

Parsing message from commit: 7b2313fdf3b27db1521bac1facbbc9e595a729df
Parsing message from commit: 77ce77409e9da770515f66bbb50a869da74aca7d
	Found: BIT_CHANGING

Checking Commit: 7b2313fdf3b27db1521bac1facbbc9e595a729df
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: 77ce77409e9da770515f66bbb50a869da74aca7d
	Checking out 7b2313fdf3b27db1521bac1facbbc9e595a729df
	Running: 'repo/compile/compile.bash'
	Running: 'rm -rf repo/output'
	Running: 'mkdir repo/output'
	Running: 'repo/run_scripts/run_scm_all.bash --min-cases'

================== ERROR ==================
Commit:  7b2313fdf3b27db1521bac1facbbc9e595a729df

Unexpected error: [Errno 2] No such file or directory: 'repo/run_scripts/run_scm_all.bash'

There was a problem with a run command.
===========================================

System Exit detected. Calling test.cleanup()

=============================== Cleanup ===============================

Removed repo.

Removing all generated output

Exiting with code: 1