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Started by an SCM change
Obtained jenkins_tests/clubb_bin_diff_regression_gfortran_test_new/Jenkinsfile from git https://github.com/larson-group/clubb.git
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test_new # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision afd382b0d483f012f91182432ac611ed4b2e77fe (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f afd382b0d483f012f91182432ac611ed4b2e77fe # timeout=10
Commit message: "Update argument list of analyzeSensMatrix in the unit tests for the dashboard."
 > git rev-list --no-walk 1bdc13a941c5b4ace4ef248c5cd76240eb9269ee # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Clone SysAdmin to tmp)
[Pipeline] sh
+ rm -rf /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
+ git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/clubb_bit_diff_test_workspace/sys_admin'...
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run Python Test)
[Pipeline] sh
+ python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23:

                hydromet, &                                          ! Unused
                       1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_KK_microphys.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_bugsrad.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_coamps.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:315:13:

     rho_ds_zt, & ! Unused
             1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libsilhs.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_morrison.a
../src/KK_microphys_module.F90:43:35:

   subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube,             & ! In
                                   1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_other.a
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/afd382b0d483f012f91182432ac611ed4b2e77fe.
Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/latest_revision_validated_1bdc13a941c5b4ace4ef248c5cd76240eb9269ee.
Diffing arm netCDF (*.nc) files
Diffing arm_97 netCDF (*.nc) files
Diffing atex netCDF (*.nc) files
Diffing bomex netCDF (*.nc) files
Diffing dycoms2_rf01 netCDF (*.nc) files
Diffing dycoms2_rf02_ds netCDF (*.nc) files
Diffing gabls3_night netCDF (*.nc) files
Diffing lba netCDF (*.nc) files
Diffing rico netCDF (*.nc) files
Diffing twp_ice netCDF (*.nc) files
Diffing wangara netCDF (*.nc) files

There were no differences detected!

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo

Output Save Mode: last

Using branch: master

Commits to test vs the baseline (1bdc13a941c5b4ace4ef248c5cd76240eb9269ee)
	afd382b0d483f012f91182432ac611ed4b2e77fe

Making list from 'UnresolvedCommits':

Run Output Path: repo/output

Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases']

Diffing command: repo/run_scripts/run_bindiff_all.bash

=============================== Running Test ===============================

Parsing message from commit: afd382b0d483f012f91182432ac611ed4b2e77fe

Checking Commit: afd382b0d483f012f91182432ac611ed4b2e77fe
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out afd382b0d483f012f91182432ac611ed4b2e77fe
	Running: 'repo/compile/compile.bash'
	Running: 'rm -rf repo/output'
	Running: 'mkdir repo/output'
	Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
	Output from 1bdc13a941c5b4ace4ef248c5cd76240eb9269ee already saved
	Diffing: 'repo/run_scripts/run_bindiff_all.bash afd382b0d483f012f91182432ac611ed4b2e77fe latest_revision_validated_1bdc13a941c5b4ace4ef248c5cd76240eb9269ee'

=============================== Test Results ===============================

Commit Range Checked = 1bdc13a941c5b4ace4ef248c5cd76240eb9269ee...afd382b0d483f012f91182432ac611ed4b2e77fe

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: afd382b0d483f012f91182432ac611ed4b2e77fe

=============================== Cleanup ===============================

Removed repo.

Removing all but final generated output.
	REMOVING: 1bdc13a941c5b4ace4ef248c5cd76240eb9269ee
	RENAMING afd382b0d483f012f91182432ac611ed4b2e77fe to latest_revision_validated_afd382b0d483f012f91182432ac611ed4b2e77fe

Exiting with code: 0
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS