Started by user Gunther Huebler Obtained jenkins_tests/clubb_bit_diff_e3sm_flags_gfortran/Jenkinsfile from git https://github.com/larson-group/clubb.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision f47ad90d2a4de346d6e03b25294c1bfc9ec1931b (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f f47ad90d2a4de346d6e03b25294c1bfc9ec1931b # timeout=10 Commit message: "Changing name of jenkins tests. larson-group/clubb#960" First time build. Skipping changelog. [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Clone SysAdmin to tmp) [Pipeline] sh + rm -rf /home/jenkins/clubb_bit_diff_e3sm_flags_gfortran_workspace/sys_admin + git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bit_diff_e3sm_flags_gfortran_workspace/sys_admin Cloning into '/home/jenkins/clubb_bit_diff_e3sm_flags_gfortran_workspace/sys_admin'... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + python3 /home/jenkins/clubb_bit_diff_e3sm_flags_gfortran_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_e3sm_flags_gfortran_workspace/bit_diff_clubb_e3sm_flags_config .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_gfdlact.a /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../src/CLUBB_core/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2535:32: 2535 | subroutine init_parameters_999( ) | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:132:23: 132 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_param.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_lapack.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libmicrophys_utils.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_parabolic.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_bugsrad.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_coamps.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_KK_microphys.a /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62: 633 | do category=1, num_importance_categories | 2 ...... 638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../src/SILHS/silhs_api_module.F90:315:13: 315 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_morrison.a ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libsilhs.a ../src/Benchmark_cases/cloud_sed_module.F90:168:44: 168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then | 1 Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo/compile/../lib/libclubb_other.a CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. mv: cannot stat ‘repo/input/tunable_parameters_e3sm/configurable_model_flags.in’: No such file or directory Directory 1 is /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/f47ad90d2a4de346d6e03b25294c1bfc9ec1931b. Directory 2 is /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/edf396c22d112b1ee54f23a177cc75de8c7b56ed. Diffing arm netCDF (*.nc) files Diffing arm_97 netCDF (*.nc) files Diffing atex netCDF (*.nc) files Diffing bomex netCDF (*.nc) files Diffing dycoms2_rf01 netCDF (*.nc) files Diffing dycoms2_rf02_ds netCDF (*.nc) files Diffing gabls3_night netCDF (*.nc) files Diffing lba netCDF (*.nc) files Diffing rico netCDF (*.nc) files Diffing twp_ice netCDF (*.nc) files Diffing wangara netCDF (*.nc) files There were no differences detected! =============================== Configuring Test =============================== Working directory set to: . Trying to clone repo... Cloned repo location: /home/jenkins/workspace/clubb_bit_diff_e3sm_flags_gfortran/repo Output Save Mode: last Using branch: master Commits to test vs the baseline (edf396c22d112b1ee54f23a177cc75de8c7b56ed) 5fccf76538e4f2b7ad5940be707ab5b369e9a4c5 3325493fac9cd915fe8a66540c528b46fd627b64 f47ad90d2a4de346d6e03b25294c1bfc9ec1931b Making list from 'UnresolvedCommits': Run Output Path: repo/output Run commands: ['repo/compile/compile.bash', '\nrm -rf repo/output', 'mkdir repo/output', '\nmv repo/input/tunable_parameters_e3sm/configurable_model_flags.in repo/input/tunable_parameters', '\nrepo/run_scripts/run_scm_all.bash --min-cases'] Diffing command: repo/run_scripts/run_bindiff_all.bash =============================== Running Test =============================== Parsing message from commit: 5fccf76538e4f2b7ad5940be707ab5b369e9a4c5 Parsing message from commit: 3325493fac9cd915fe8a66540c528b46fd627b64 Parsing message from commit: f47ad90d2a4de346d6e03b25294c1bfc9ec1931b Checking Commit: 5fccf76538e4f2b7ad5940be707ab5b369e9a4c5 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 3325493fac9cd915fe8a66540c528b46fd627b64 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: f47ad90d2a4de346d6e03b25294c1bfc9ec1931b Running: final commit to check, not labelled BIT_CHANGING Checking out f47ad90d2a4de346d6e03b25294c1bfc9ec1931b Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' mv repo/input/tunable_parameters_e3sm/configurable_model_flags.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Checking out edf396c22d112b1ee54f23a177cc75de8c7b56ed Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' mv repo/input/tunable_parameters_e3sm/configurable_model_flags.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Diffing: 'repo/run_scripts/run_bindiff_all.bash f47ad90d2a4de346d6e03b25294c1bfc9ec1931b edf396c22d112b1ee54f23a177cc75de8c7b56ed' =============================== Test Results =============================== Commit Range Checked = edf396c22d112b1ee54f23a177cc75de8c7b56ed...f47ad90d2a4de346d6e03b25294c1bfc9ec1931b No new Unresolved commits found. No fake BIT_CHANGING commits found. No remaining Unresolved Commits. =============================== Updating Config File =============================== Saving into UnresolvedCommits: Saving into BaselineCommit: f47ad90d2a4de346d6e03b25294c1bfc9ec1931b =============================== Cleanup =============================== Removed repo. Removing all but final generated output. REMOVING: edf396c22d112b1ee54f23a177cc75de8c7b56ed RENAMING f47ad90d2a4de346d6e03b25294c1bfc9ec1931b to latest_revision_validated_f47ad90d2a4de346d6e03b25294c1bfc9ec1931b ================== Unresolved Commit Status ================== No remaining Unresolved Commits. Exiting with code: 0 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS