Console Output

Started by an SCM change
Obtained jenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on nelson in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/.git # timeout=10
 > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10
Fetching upstream changes from https://github.com/larson-group/cam.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision a6e8f378bc25c7cb5627d18a512fc00e8328c873 (refs/remotes/origin/clubb_silhs_devel)
Commit message: "Autoupdated CLUBB_core Commit 3f865924bdcf798fa45acaa67b57c44f40c32d89 Author: Gunther Huebler Date: Wed Jul 31 17:30:51 2024 -0500 Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test."
 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f a6e8f378bc25c7cb5627d18a512fc00e8328c873 # timeout=10
 > git rev-list --no-walk c0a710c144a2cb7367fd07d20be1f9ab92757a45 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Externals and Copy Custom Files)
[Pipeline] sh
+ python run_scripts/set_up_cam_coarse_res.py .
Checking out externals...
Copying ccs_config files
Traceback (most recent call last):
  File "/home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/run_scripts/set_up_cam_coarse_res.py", line 78, in <module>
    os.mkdir("ccs_config/machines/larson-group")
FileExistsError: [Errno 17] File exists: 'ccs_config/machines/larson-group'
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Make cprnc)
Stage "Make cprnc" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run CAM)
Stage "Run CAM" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] sh
+ chmod -R 755 /home/jenkins/cam_output
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.larson-group_gnu.cam-silhs.*/bld/atm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.larson-group_gnu.cam-silhs.*/bld/atm.bldlog.*.gz: No such file or directory
[Pipeline] echo
Not all logs were made.
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 1
Finished: FAILURE