Console Output

Started by an SCM change
Obtained jenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on nelson in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/cam.git
 > git init /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/cam.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Checking out Revision ddbf527f73f88f37c06a2bb9c975dad41a92941d (refs/remotes/origin/clubb_silhs_devel)
Commit message: "Autoupdated CLUBB_core Commit ef65d2727180b4c76d113cc0da1f6b5d4d3f1610 Author: bmg929 Date: Thu Jul 11 22:36:57 2024 -0500 This code in adj_low_res_nu was using the ghost point when grid_type = 2. This has now been changed to not include the ghost level. This code is BIT_CHANGING."
 > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f ddbf527f73f88f37c06a2bb9c975dad41a92941d # timeout=10
 > git rev-list --no-walk 8ec5b1797b34ec4da71673e6244550b5cd84f5d0 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Externals and Copy Custom Files)
[Pipeline] sh
+ python run_scripts/set_up_cam_coarse_res.py .
Checking out externals...
Copying ccs_config files
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Make cprnc)
[Pipeline] dir
Running in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/cime/tools/cprnc
[Pipeline] {
[Pipeline] sh
+ bash -c 'export LIB_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib; export INC_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/include; ../configure --macros-format=Makefile --mpilib=mpi-serial --machine larson-group; source ./.env_mach_specific.sh; make'
bash: line 1: ../configure: No such file or directory
bash: line 1: ./.env_mach_specific.sh: No such file or directory
make: *** No targets specified and no makefile found.  Stop.
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run CAM)
Stage "Run CAM" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] sh
+ chmod -R 755 /home/jenkins/cam_output
chmod: cannot access '/home/jenkins/cam_output': No such file or directory
[Pipeline] }
[Pipeline] // script
Error when executing always post condition:
Also:   org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: fb2b24aa-331c-4a3a-9f07-6eae0b95d5b9
hudson.AbortException: script returned exit code 1
	at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.handleExit(DurableTaskStep.java:668)
	at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.check(DurableTaskStep.java:614)
	at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.run(DurableTaskStep.java:555)
	at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539)
	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
	at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:304)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at java.base/java.lang.Thread.run(Thread.java:840)

[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 2
Finished: FAILURE