Console Output

Started by an SCM change
Obtained jenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
 > git rev-parse --resolve-git-dir /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10
Fetching upstream changes from https://github.com/larson-group/cam.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision 43573e52da6a67f0ecf8ab2abc6610fb4d199038 (refs/remotes/origin/clubb_silhs_devel)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 43573e52da6a67f0ecf8ab2abc6610fb4d199038 # timeout=10
Commit message: "Autoupdated CLUBB_core Commit 9136bf065fe59e64db24c8a3f2aeee7178450273 Author: bmg929 Date: Tue Apr 23 18:54:36 2024 -0500 I'm changing the way ddzt handles the derivative over momentum level 1. Previously, it was based on the differential between the ghost point and the first level above the surface. Now, the value of the derivative at momentum level 2 is simply being dropped down to momentum level 1. This is being done in advance of ghost point removal."
 > git rev-list --no-walk 1162edcc7e552905e227178b7e53d752bd7eb7d0 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Externals and Copy Custom Files)
[Pipeline] sh
+ python run_scripts/set_up_cam_coarse_res.py .
Checking out externals...
Copying cime config files
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Make cprnc)
[Pipeline] dir
Running in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/cime/tools/cprnc
[Pipeline] {
[Pipeline] sh
+ bash -c 'export LIB_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib; export INC_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/include; ../configure --macros-format=Makefile --mpilib=mpi-serial --machine nelson; source ./.env_mach_specific.sh; make'
bash: line 1: ../configure: No such file or directory
bash: line 1: ./.env_mach_specific.sh: No such file or directory
make: *** No targets specified and no makefile found.  Stop.
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run CAM)
Stage "Run CAM" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] sh
+ chmod -R 755 /home/jenkins/cam_output
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-silhs.*/bld/atm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-silhs.*/bld/atm.bldlog.*.gz: No such file or directory
[Pipeline] echo
Not all logs were made.
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 2
Finished: FAILURE