Console Output

Started by an SCM change
Obtained jenkins_tests/cam_silhs_global_ERP_ln9_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
 > git rev-parse --resolve-git-dir /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10
Fetching upstream changes from https://github.com/larson-group/cam.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision 946803a5f7b25d1c78d3affcf95001280817afad (refs/remotes/origin/clubb_silhs_devel)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 946803a5f7b25d1c78d3affcf95001280817afad # timeout=10
Commit message: "Autoupdated CLUBB_core Commit 5e8d77d91747026bab725541591873b57d68e430 Author: bmg929 Date: Sat Apr 6 09:15:30 2024 -0500 It was discovered that the location where the ghost point values of um and vm were set equal to their respective values at the first thermodynamic level above the surface was not ideal. Their assignment occurred before the love nudge (l_uv_nudge). Then, the love nudge came along and altered their values so that um(1) no longer equaled um(2) -- and analogous for vm(1) and vm(2) -- for a half dozen cases. In addition to making the code inconsistent, it also caused bit-for-bitness differences between the master and clubb_ghost_exorcism branches. For those reasons, this BIT_CHANGING commit is being made."
 > git rev-list --no-walk aa83c658d09111be0f1ebed74348deadb11c5d68 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Externals and Copy Custom Files)
[Pipeline] sh
+ python run_scripts/set_up_cam_coarse_res.py .
Checking out externals...
Copying cime config files
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Make cprnc)
[Pipeline] dir
Running in /home/jenkins/workspace/cam_silhs_global_erp_ln9_gfortran_test/cime/tools/cprnc
[Pipeline] {
[Pipeline] sh
+ bash -c 'export LIB_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib; export INC_NETCDF=/usr/local/NETCDF-Fortran-4.5.3-gfortran/include; ../configure --macros-format=Makefile --mpilib=mpi-serial --machine nelson; source ./.env_mach_specific.sh; make'
bash: line 1: ../configure: No such file or directory
bash: line 1: ./.env_mach_specific.sh: No such file or directory
make: *** No targets specified and no makefile found.  Stop.
[Pipeline] }
[Pipeline] // dir
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run CAM)
Stage "Run CAM" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] sh
+ chmod -R 755 /home/jenkins/cam_output
[Pipeline] sh
+ gzip -d '/home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-silhs.*/bld/atm.bldlog.*.gz'
gzip: /home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-silhs.*/bld/atm.bldlog.*.gz: No such file or directory
[Pipeline] echo
Not all logs were made.
[Pipeline] }
[Pipeline] // script
[Pipeline] script
[Pipeline] {
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 2
Finished: FAILURE