Started by an SCM change Obtained jenkins_tests/cam_BFB_coarse_res_gfortran_test/Jenkinsfile from git https://github.com/larson-group/cam.git [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task ‘condella’ is offline ‘malan’ is offline ‘overlie’ is offline Running on mitch in /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/cam.git > git init /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/cam.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/cam.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch Checking out Revision 2259ee49356a760a00310a0e9de93d08a4da9736 (refs/remotes/origin/clubb_silhs_devel) Commit message: "Autoupdated CLUBB_core Commit 73dc365c77ab4bf2405d753f167307ae9be330a0 Author: Gunther Huebler Date: Wed May 27 13:49:11 2026 -0500 Removing unneccesary wp2_zt conversion that should've been removed already, but was accidentally added back in the last PR when trying to split BFB from non-BFB changes. This was an unused local variable so this does not affect anything." > git config remote.origin.url https://github.com/larson-group/cam.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 2259ee49356a760a00310a0e9de93d08a4da9736 # timeout=10 > git rev-list --no-walk b89dc55c506ad16e5a3c8eeab762fe3156a8d1e1 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Update sys_admin Repo) [Pipeline] sh + git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull Already up to date. [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37 + ulimit -s 8388608 + python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/cam_BFB_coarse_res_gfortran_test_config ERROR: Unknown Job Queue specified use --force to set submit_jobs case.run Submit job case.run No timing file found in run directory check for resubmit dout_s False mach larson-group resubmit_num 0 ERROR: Unknown Job Queue specified use --force to set submit_jobs case.run Submit job case.run No timing file found in run directory check for resubmit dout_s False mach larson-group resubmit_num 0 -------- Variable Diff Summary -------- File 1: 2259ee49356a760a00310a0e9de93d08a4da9736 File 2: 2227d41a282c517c62373666a5531dc820ed2360 Variables discovered (union): 1620 Variables present in both files: 1620 Variables only in file 1: 0 Variables only in file 2: 0 Variables with differences (all dimensions): 4 Variables identical (all dimensions): 1616 Variables all-zero in file 1 (actual data): 131 Variables all-zero in file 2 (actual data): 131 Variables all-zero in both files (actual data): 131 3D variables tested (PASS/FAIL basis): 587 3D variables with differences: 3 3D variables identical: 584 3D variables all-zero in both files (actual data): 93 Variables skipped for PASS/FAIL (not 3D in either file): 1033 Variables with differences: - a3_coef_zt | reason=data mismatch | file1: ndim=3, dims=('ilev', 'lat', 'lon') | file2: ndim=3, dims=('ilev', 'lat', 'lon') - time_written | reason=data mismatch | file1: ndim=2, dims=('time', 'chars') | file2: ndim=2, dims=('time', 'chars') - wp3_on_wp2 | reason=data mismatch | file1: ndim=3, dims=('ilev', 'lat', 'lon') | file2: ndim=3, dims=('ilev', 'lat', 'lon') - wp3_on_wp2_zt | reason=data mismatch | file1: ndim=3, dims=('ilev', 'lat', 'lon') | file2: ndim=3, dims=('ilev', 'lat', 'lon') FAIL: Found differences in one or more 3D variables. =============================== Configuring Test =============================== Working directory set to: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test Checking specified repo: /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test Using /home/jenkins/workspace/cam_BFB_coarse_res_gfortran_test with origin https://github.com/larson-group/cam.git Output Save Mode: none Using branch: clubb_silhs_devel Making list from 'UnresolvedCommits': CheckRange = False: only comparing baseline to final commit. Run Output Path: /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37/run/subcol_SILHS_UWM_debug_f10_f10_mg37.cam.rh0.0001-01-02-00000.nc Run commands: ['rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37', '\nrun_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/subcol_SILHS_UWM_debug_f10_f10_mg37 --reuse_build --silhs 4 .', '\nrun_scripts/run_cesm_uwm_coarse_res.sh'] Diffing command: python3 run_scripts/netcdf_3D_vars_diff.py =============================== Running Test =============================== Parsing message from commit: 2259ee49356a760a00310a0e9de93d08a4da9736 Checking Commit: 2259ee49356a760a00310a0e9de93d08a4da9736 Running: final commit to check, not labelled BIT_CHANGING Checking out 2259ee49356a760a00310a0e9de93d08a4da9736 Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37' Running: 'run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/subcol_SILHS_UWM_debug_f10_f10_mg37 --reuse_build --silhs 4 .' Running: 'run_scripts/run_cesm_uwm_coarse_res.sh' Checking out 2227d41a282c517c62373666a5531dc820ed2360 Running: 'rm -rf /home/jenkins/cam_output/scratch/subcol_SILHS_UWM_debug_f10_f10_mg37' Running: 'run_scripts/set_up_repo.py --caseroot /home/$USER/cam_output/caseroot/subcol_SILHS_UWM_debug_f10_f10_mg37 --reuse_build --silhs 4 .' Running: 'run_scripts/run_cesm_uwm_coarse_res.sh' Diffing: 'python3 run_scripts/netcdf_3D_vars_diff.py 2259ee49356a760a00310a0e9de93d08a4da9736 2227d41a282c517c62373666a5531dc820ed2360' ISSUE WITH COMMIT DETECTED: 2259ee49356a760a00310a0e9de93d08a4da9736 differs from 2227d41a282c517c62373666a5531dc820ed2360 =============================== Test Results =============================== Commit Range Checked = 2227d41a282c517c62373666a5531dc820ed2360...2259ee49356a760a00310a0e9de93d08a4da9736 -- CheckRange was set to False, no intermediate commits checked New Unresolved Commits: 2259ee49356a760a00310a0e9de93d08a4da9736 No fake BIT_CHANGING commits found. Remaining Unresolved Commits (oldest commit is listed first): 2259ee49356a760a00310a0e9de93d08a4da9736 =============================== Updating Config File =============================== Saving into UnresolvedCommits: 2259ee49356a760a00310a0e9de93d08a4da9736 Saving into BaselineCommit: 2259ee49356a760a00310a0e9de93d08a4da9736 =============================== Cleanup =============================== Removing all generated output REMOVING: 2227d41a282c517c62373666a5531dc820ed2360 REMOVING: 2259ee49356a760a00310a0e9de93d08a4da9736 ================== Unresolved Commit Status ================== Remaining Unresolved Commits (oldest commit is listed first): 2259ee49356a760a00310a0e9de93d08a4da9736 Exiting with code: 1 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] sh + chmod -R 755 /home/jenkins/cam_output [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE