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[808/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
[809/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_grads.F90.o
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[812/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[813/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[814/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[815/915] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
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[818/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o
[819/915] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
[820/915] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[821/915] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[822/915] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a
[823/915] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
[824/915] Linking Fortran static library src/Input_fields/libinput_fields_lib.a
[825/915] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd
[826/915] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd
[827/915] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd
[828/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o
[829/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o
[830/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o
[831/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o
[832/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o
[833/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o
[834/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o
[835/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o
[836/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o
[837/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o
[838/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o
[839/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o
[840/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o
/home/jenkins/workspace/clubb_driver_test/src/Microphys/silhs_category_variance_module.F90(18): remark #7712: This variable has not been used. [MICROPHYS_STATS_VARS_ALL]
X_mixt_comp_all_levs, microphys_stats_vars_all, &
-------------------------------------^
[841/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o
[842/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o
[843/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o
[844/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o
[845/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o
[846/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o
[847/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o
[848/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o
[849/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[850/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
[851/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o
[852/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o
[853/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o
[854/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o
[855/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o
[856/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o
[857/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o
[858/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o
[859/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o
[860/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o
[861/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o
[862/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o
[863/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o
[864/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o
[865/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o
/home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/ekman.F90(20): remark #7712: This variable has not been used. [Z]
subroutine ekman_sfclyr( ngrdcol, z, &
------------------------------------^
[866/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o
[867/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o
[868/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o
[869/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o
[870/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o
[871/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o
[872/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o
[873/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o
[874/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o
/home/jenkins/workspace/clubb_driver_test/src/Microphys/advance_microphys_module.F90(588): remark #7712: This variable has not been used. [L_UPWIND_DIFF_SED]
l_upwind_diff_sed
--------^
/home/jenkins/workspace/clubb_driver_test/src/Microphys/advance_microphys_module.F90(728): remark #7712: This variable has not been used. [NAME_KHM]
name_hmp2, name_wp, name_khm
--------------------------^
[875/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o
[876/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o
[877/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o
[878/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o
[879/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o
[880/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o
[881/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[882/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o
/home/jenkins/workspace/clubb_driver_test/src/Microphys/KK_microphys_module.F90(43): remark #7712: This variable has not been used. [GR]
subroutine KK_local_microphys( gr, dt, nzt, & ! In
---------------------------------^
/home/jenkins/workspace/clubb_driver_test/src/Microphys/KK_microphys_module.F90(50): remark #7712: This variable has not been used. [ICOL]
stats, icol, & ! In
----------------------------------------^
[883/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o
[884/915] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o
[885/915] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a
[886/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o
[887/915] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o
[888/915] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a
[889/915] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd
[890/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o
/home/jenkins/workspace/clubb_driver_test/src/Microphys/morrison_microphys_module.F90(20): remark #7712: This variable has not been used. [SATURATION_FORMULA]
saturation_formula, &
---------------^
/home/jenkins/workspace/clubb_driver_test/src/Microphys/morrison_microphys_module.F90(21): remark #7712: This variable has not been used. [STATS]
stats, icol, &
---------------^
/home/jenkins/workspace/clubb_driver_test/src/Microphys/morrison_microphys_module.F90(21): remark #7712: This variable has not been used. [ICOL]
stats, icol, &
----------------------^
[891/915] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o
[892/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o
[893/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o
[894/915] Linking Fortran executable src/G_unit_tests
[895/915] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o
[896/915] Linking Fortran static library src/Microphys/libmicrophys_lib.a
[897/915] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd
[898/915] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/soil_vegetation.F90.o
[899/915] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o
/home/jenkins/workspace/clubb_driver_test/src/generalized_grid_test.F90(698): remark #7712: This variable has not been used. [HM_IDX]
i, sclr, edsclr, hm_idx
-----------------------^
[900/915] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o
/home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90(2641): remark #7712: This variable has not been used. [ERR_INFO]
subroutine set_case_initial_conditions(err_info)
-----------------------------------------^
/home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90(4524): remark #7712: This variable has not been used. [GRID_ADAPT_IN_TIME_METHOD]
grid_adapt_in_time_method, &
----------------^
/home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90(4523): remark #7712: This variable has not been used. [L_ADD_DYCORE_GRID]
l_add_dycore_grid, &
----------------^
/home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90(3126): remark #7712: This variable has not been used. [L_STATS_LAST]
l_stats_last
------^
/home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90(3146): remark #7712: This variable has not been used. [RET_CODE]
ret_code, &
------^
[901/915] Linking Fortran static library src/libclubb_driver_lib.a
[902/915] Generating Fortran dyndep file src/CMakeFiles/clubb_thread_test.dir/Fortran.dd
[903/915] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone.dir/Fortran.dd
[904/915] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_test.dir/Fortran.dd
[905/915] Generating Fortran dyndep file src/CMakeFiles/clubb_tuner.dir/Fortran.dd
[906/915] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o
[907/915] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o
[908/915] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o
[909/915] Linking Fortran executable src/clubb_thread_test
[910/915] Linking Fortran executable src/clubb_standalone
[911/915] Linking Fortran executable src/clubb_driver_test
[912/915] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o
[913/915] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o
/home/jenkins/workspace/clubb_driver_test/src/clubb_tuner.F90(86): warning #8889: Explicit interface or EXTERNAL declaration is required. [PARAM_LOOPS_DRIVER]
call param_loops_driver( )
---------------^
[914/915] Linking Fortran executable src/clubb_tuner
[914/915] Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_tuner" to "/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib"
-- Installing: /home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/G_unit_tests" to "/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib"
-- Installing: /home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_thread_test" to "/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib"
-- Installing: /home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_standalone" to "/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib"
-- Installing: /home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_driver_test/install/ifx_PRECdouble/clubb_driver_test" to "/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib"
check_for_missing_threadprivate.py has begun.
File /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/corr_varnce_module.F90 failed:
Missing threadprivate for:
corr_array_n_cloud_def
corr_array_n_below_def
File /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/error_code.F90 failed:
Missing threadprivate for:
clubb_debug_level
File /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/sponge_layer_damping.F90 failed:
Missing threadprivate for:
wp2_sponge_damp_settings
rtm_sponge_damp_profile
rtm_sponge_damp_settings
wp3_sponge_damp_settings
up2_vp2_sponge_damp_profile
thlm_sponge_damp_profile
uv_sponge_damp_settings
up2_vp2_sponge_damp_settings
wp2_sponge_damp_profile
wp3_sponge_damp_profile
thlm_sponge_damp_settings
uv_sponge_damp_profile
File /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/fill_holes.F90 failed:
Missing threadprivate for:
ret_code
[91mcheck_for_missing_threadprivate.py did not pass.[0m
[91mfailedFiles = ['/home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/corr_varnce_module.F90', '/home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/error_code.F90', '/home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/sponge_layer_damping.F90', '/home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/fill_holes.F90'][0m
[91m===============================================================
[91mTHREADPRIVATE CHECK FAILED
[91m THIS IS PRINTED IN ALL RED, CAPITAL LETTERS, AND USES
[91m AN EXCLAMATION MARK TO ENSURE THE DEVELOPERS FEEL SHAME!
[91m IF YOU ARE ONE OF THESE "DEVELOPERS" CHECK THE
[91m LOG FILE FOR DETAILS: /home/jenkins/workspace/clubb_driver_test/build/ifx_PRECdouble/cmake_build_output.txt
[91m===============================================================[0m
CLUBBStandardsCheck.py has begun.
--------------------- Default Private Check: /home/jenkins/workspace/clubb_driver_test/src/generalized_grid_test.F90 ---------------------
WARNING: Missing default 'private' in the following modules:
line 3: module generalized_grid_test
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/generalized_grid_test.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 903 : 115 chars : if ( clubb_config_flags%iiPDF_type == iiPDF_new .or. clubb_config_flags%iiPDF_type == iiPDF_new_hybrid ) then
line 1071 : 101 chars : rtm_ref_flip, thlm_ref_flip, um_ref_flip, vm_ref_flip, ug_flip, vg_flip, & ! Intent(in)
line 1084 : 111 chars : um_flip, vm_flip, upwp_flip, vpwp_flip, up2_flip, vp2_flip, up3_flip, vp3_flip, & ! Intent(inout)
line 1086 : 111 chars : wp2_flip, wp3_flip, rtp2_flip, rtp3_flip, thlp2_flip, thlp3_flip, rtpthlp_flip, & ! Intent(inout)
line 1092 : 109 chars : wp2rtp_flip, wp2thlp_flip, uprcp_flip, vprcp_flip, rc_coef_zm_flip, wp4_flip, & ! intent(inout)
line 1093 : 105 chars : wpup2_flip, wpvp2_flip, wp2up2_flip, wp2vp2_flip, ice_supersat_frac_flip, & ! intent(inout)
line 1582 : 115 chars : if ( clubb_config_flags%iiPDF_type == iiPDF_new .or. clubb_config_flags%iiPDF_type == iiPDF_new_hybrid ) then
line 1609 : 102 chars : pdf_implicit_coefs_terms_flip%coef_wp2up_implicit, nzt, ngrdcol, &
line 1613 : 102 chars : pdf_implicit_coefs_terms_flip%term_wp2up_explicit, nzt, ngrdcol, &
line 1617 : 102 chars : pdf_implicit_coefs_terms_flip%coef_wp2vp_implicit, nzt, ngrdcol, &
line 1621 : 102 chars : pdf_implicit_coefs_terms_flip%term_wp2vp_explicit, nzt, ngrdcol, &
line 1655 : 102 chars : pdf_implicit_coefs_terms_flip%coef_wpup2_implicit, nzt, ngrdcol, &
line 1659 : 102 chars : pdf_implicit_coefs_terms_flip%term_wpup2_explicit, nzt, ngrdcol, &
line 1663 : 102 chars : pdf_implicit_coefs_terms_flip%coef_wpvp2_implicit, nzt, ngrdcol, &
line 1667 : 102 chars : pdf_implicit_coefs_terms_flip%term_wpvp2_explicit, nzt, ngrdcol, &
line 2471 : 105 chars : tolerance = max( 1.e-8_core_rknd, epsilon(tolerance) ) ! max statement for single precision runs
----------------------------------------------------------------------------------------------------
--------------------- Implicit None Check: /home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90 ---------------------
WARNING: 'use' statements without 'only' found in the following lines:
WARNING: Check that comma is on same line as 'use', as CLUBB requires.
3107 : use gptl
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/clubb_driver.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 200 : 110 chars : l_modify_ic_with_cubic_int, & ! Flag for interpolating the sounding profile with Steffen's monotone cubic
line 201 : 110 chars : ! method to obtain smoother initial condition profile, which is found to be
line 202 : 111 chars : ! beneficial to achive a better numerical solution convergence. If this flag
line 203 : 118 chars : ! is turned off, the initial conditions will be generated with linear interpolation.
line 204 : 111 chars : ! This is done on a case-by-case basis, since using the monotone cubic method
line 205 : 109 chars : ! requires a special sounding.in file with many additional sounding levels.
line 206 : 109 chars : l_modify_bc_for_cnvg_test, & ! Flag to activate modifications on boundary condition for convergence test
line 738 : 101 chars : !$omp sens_ht, latent_ht, lmin, vert_decorr_coef, deep_soil_T_in_K, sfc_soil_T_in_K, veg_T_in_K, &
line 745 : 101 chars : !$omp exner, rtm, thlm, rcm, wp3, wp3_zm, delta_zm, p_in_Pa, cloud_frac, wpthvp, wp2thvp, wp2up, &
line 754 : 102 chars : !$omp rtp2_mc, thlp2_mc, rtpthlp_mc, Ncm_mc, Ncm, Nccnm, em, tau_zm, tau_zt, Kh_zt, Kh_zm, rfrzm, &
line 755 : 105 chars : !$omp rrm, Nrm, Nc_in_cloud, wpNcp, radht, Frad, Frad_SW_up, Frad_LW_up, Frad_SW_down, Frad_LW_down, &
line 756 : 102 chars : !$omp wpsclrp_sfc, wpedsclrp_sfc, sclrm, wpsclrp, sclrp2, sclrp3, sclrprtp, sclrpthlp, sclrpthvp, &
line 1016 : 104 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
line 1746 : 102 chars : open(unit=iunit_grid_adaptation, file=fname_grid_adaptation, status='replace', action='write')
line 2062 : 105 chars : allocate( um_ref(ngrdcol, gr%nzt) ) ! Reference u wind for nudging; Michael Falk, 17 Oct 2007
line 2063 : 105 chars : allocate( vm_ref(ngrdcol, gr%nzt) ) ! Reference v wind for nudging; Michael Falk, 17 Oct 2007
line 2502 : 113 chars : if ( clubb_config_flags%iiPDF_type == iiPDF_new .or. clubb_config_flags%iiPDF_type == iiPDF_new_hybrid ) then
line 2533 : 106 chars : ! Similar call to above, checking parameter values, but because we've placed this in "init_clubb_case"
line 2541 : 116 chars : write(fstderr, *) "Fatal error calling check_clubb_settings_api and/or check_parameters_api in clubb_driver"
line 2584 : 111 chars : !$acc rcm_in_layer, cloud_cover, wprcp, w_up_in_cloud, w_down_in_cloud, cloudy_updraft_frac, &
line 2596 : 101 chars : !$acc pdf_params%corr_w_thl_2, pdf_params%corr_rt_thl_1, pdf_params%corr_rt_thl_2, &
line 2597 : 103 chars : !$acc pdf_params%alpha_thl, pdf_params%alpha_rt, pdf_params%crt_1, pdf_params%crt_2, &
line 2600 : 104 chars : !$acc pdf_params%stdev_eta_2, pdf_params%covar_chi_eta_1, pdf_params%covar_chi_eta_2, &
line 2602 : 103 chars : !$acc pdf_params%corr_w_eta_2, pdf_params%corr_chi_eta_1, pdf_params%corr_chi_eta_2, &
line 2608 : 101 chars : !$acc pdf_params_zm%thl_2, pdf_params_zm%varnce_thl_1, pdf_params_zm%varnce_thl_2, &
line 2609 : 106 chars : !$acc pdf_params_zm%corr_w_rt_1, pdf_params_zm%corr_w_rt_2, pdf_params_zm%corr_w_thl_1, &
line 2610 : 110 chars : !$acc pdf_params_zm%corr_w_thl_2, pdf_params_zm%corr_rt_thl_1, pdf_params_zm%corr_rt_thl_2, &
line 2611 : 115 chars : !$acc pdf_params_zm%alpha_thl, pdf_params_zm%alpha_rt, pdf_params_zm%crt_1, pdf_params_zm%crt_2, &
line 2612 : 110 chars : !$acc pdf_params_zm%cthl_1, pdf_params_zm%cthl_2, pdf_params_zm%chi_1, pdf_params_zm%chi_2, &
line 2613 : 105 chars : !$acc pdf_params_zm%stdev_chi_1, pdf_params_zm%stdev_chi_2, pdf_params_zm%stdev_eta_1, &
line 2614 : 113 chars : !$acc pdf_params_zm%stdev_eta_2, pdf_params_zm%covar_chi_eta_1, pdf_params_zm%covar_chi_eta_2, &
line 2615 : 108 chars : !$acc pdf_params_zm%corr_w_chi_1, pdf_params_zm%corr_w_chi_2, pdf_params_zm%corr_w_eta_1, &
line 2616 : 112 chars : !$acc pdf_params_zm%corr_w_eta_2, pdf_params_zm%corr_chi_eta_1, pdf_params_zm%corr_chi_eta_2, &
line 2617 : 110 chars : !$acc pdf_params_zm%rsatl_1, pdf_params_zm%rsatl_2, pdf_params_zm%rc_1, pdf_params_zm%rc_2, &
line 2726 : 103 chars : invrs_rho_ds_zt(i,k) = invrs_rho_ds_zt_init(k) ! inv. dry, static density: t-levs
line 2732 : 103 chars : um_pert(i,k) = zero ! Variables used to track perturbed version of winds.
line 2734 : 105 chars : wm_zt(i,k) = wm_zt_init(k) ! Imposed large scale w - Thermodynamic levels
line 2928 : 113 chars : if ( clubb_config_flags%iiPDF_type == iiPDF_new .or. clubb_config_flags%iiPDF_type == iiPDF_new_hybrid ) then
line 3119 : 101 chars : !----------------------------------- Optional Input Variables -----------------------------------
line 3276 : 103 chars : um(i,:), vm(i,:), rtm(i,:), wprtp(i,:), thlm(i,:), wpthlp(i,:), &
line 3609 : 111 chars : !$acc X_nl_all_levs, X_mixt_comp_all_levs, lh_sample_point_weights, mu_x_1_n, mu_x_2_n, &
line 3611 : 104 chars : !$acc lh_rt_clipped, lh_thl_clipped, lh_rc_clipped, lh_rv_clipped, lh_Nc_clipped, &
line 3615 : 116 chars : !$acc pdf_params%cloud_frac_1, pdf_params%cloud_frac_2, pdf_params%cthl_1, pdf_params%cthl_2, &
line 3616 : 112 chars : !$acc pdf_params%crt_1, pdf_params%crt_2, pdf_params%stdev_chi_1, pdf_params%stdev_chi_2, &
line 3632 : 102 chars : wp2_zt = zm2zt_api( gr%nzm, gr%nzt, ngrdcol, gr, wp2, w_tol_sqd ) ! Positive definite quantity
line 3638 : 109 chars : thlm(i,:), p_in_Pa(i,:), exner(i,:), rho(i,:), rho_zm(i,:), rtm(i,:), &! In
line 3639 : 109 chars : rcm(i,:), cloud_frac(i,:), wm_zt(i,:), wm_zm(i,:), wp2_zt(i,:), & ! In
line 3640 : 106 chars : hydromet(i,:,:), Nc_in_cloud(i,:), & ! In
line 3657 : 102 chars : Nccnm(i,:), & ! Inout
line 3658 : 117 chars : hydromet_mc(i,:,:), Ncm_mc(i,:), rcm_mc(i,:), rvm_mc(i,:), & ! Out
line 3659 : 107 chars : thlm_mc(i,:), hydromet_vel_zt(i,:,:), & ! Out
line 3660 : 102 chars : hydromet_vel_covar_zt_impc(i,:,:), & ! Out
line 3661 : 102 chars : hydromet_vel_covar_zt_expc(i,:,:), & ! Out
line 3662 : 110 chars : wprtp_mc(i,:), wpthlp_mc(i,:), rtp2_mc(i,:), & ! Out
line 3663 : 105 chars : thlp2_mc(i,:), rtpthlp_mc(i,:) ) ! Out
line 3687 : 103 chars : stats, i, & ! Inout
line 3688 : 103 chars : hydromet(i,:,:), hydromet_vel_zt(i,:,:), hydrometp2(i,:,:), & ! Inout
line 3689 : 103 chars : K_hm(i,:,:), Ncm(i,:), Nc_in_cloud(i,:), rvm_mc(i,:), & ! Inout
line 3690 : 103 chars : thlm_mc(i,:), err_info, & ! Inout
line 3691 : 101 chars : wphydrometp(i,:,:), wpNcp(i,:) ) ! Out
line 3700 : 106 chars : !$acc update device( rcm_mc, rvm_mc, thlm_mc, wprtp_mc, wpthlp_mc, rtp2_mc, thlp2_mc, rtpthlp_mc )
line 3753 : 104 chars : !$acc update host( rvm_mc, rcm_mc, thlm_mc, wprtp_mc, wpthlp_mc, rtp2_mc, thlp2_mc, rtpthlp_mc )
line 3780 : 105 chars : !$acc update host( rho, rho_zm, p_in_Pa, exner, cloud_frac, ice_supersat_frac, X_nl_all_levs, &
line 3806 : 105 chars : !$acc update host( rho, rho_zm, p_in_Pa, exner, cloud_frac, ice_supersat_frac, thlm, rtm, rcm )
line 3907 : 112 chars : call stats_update( "brunt_term_time_avg", richardson_num_term_weight*richardson_num_term_time_avg, &
line 3933 : 101 chars : .and. stats%l_last_sample ) then ! only adapt grid when the average of the last
line 4062 : 103 chars : write(unit=fstdout, fmt='(a,f10.4)') 'CLUBB-TIMER time_microphys_scheme = ', time_microphys_scheme
line 4063 : 104 chars : write(unit=fstdout, fmt='(a,f10.4)') 'CLUBB-TIMER time_microphys_advance = ', time_microphys_advance
line 4182 : 111 chars : !$acc rcm_in_layer, cloud_cover, wprcp, w_up_in_cloud, w_down_in_cloud, cloudy_updraft_frac, &
line 4194 : 101 chars : !$acc pdf_params%corr_w_thl_2, pdf_params%corr_rt_thl_1, pdf_params%corr_rt_thl_2, &
line 4195 : 103 chars : !$acc pdf_params%alpha_thl, pdf_params%alpha_rt, pdf_params%crt_1, pdf_params%crt_2, &
line 4198 : 104 chars : !$acc pdf_params%stdev_eta_2, pdf_params%covar_chi_eta_1, pdf_params%covar_chi_eta_2, &
line 4200 : 103 chars : !$acc pdf_params%corr_w_eta_2, pdf_params%corr_chi_eta_1, pdf_params%corr_chi_eta_2, &
line 4206 : 101 chars : !$acc pdf_params_zm%thl_2, pdf_params_zm%varnce_thl_1, pdf_params_zm%varnce_thl_2, &
line 4207 : 106 chars : !$acc pdf_params_zm%corr_w_rt_1, pdf_params_zm%corr_w_rt_2, pdf_params_zm%corr_w_thl_1, &
line 4208 : 110 chars : !$acc pdf_params_zm%corr_w_thl_2, pdf_params_zm%corr_rt_thl_1, pdf_params_zm%corr_rt_thl_2, &
line 4209 : 115 chars : !$acc pdf_params_zm%alpha_thl, pdf_params_zm%alpha_rt, pdf_params_zm%crt_1, pdf_params_zm%crt_2, &
line 4210 : 110 chars : !$acc pdf_params_zm%cthl_1, pdf_params_zm%cthl_2, pdf_params_zm%chi_1, pdf_params_zm%chi_2, &
line 4211 : 105 chars : !$acc pdf_params_zm%stdev_chi_1, pdf_params_zm%stdev_chi_2, pdf_params_zm%stdev_eta_1, &
line 4212 : 113 chars : !$acc pdf_params_zm%stdev_eta_2, pdf_params_zm%covar_chi_eta_1, pdf_params_zm%covar_chi_eta_2, &
line 4213 : 108 chars : !$acc pdf_params_zm%corr_w_chi_1, pdf_params_zm%corr_w_chi_2, pdf_params_zm%corr_w_eta_1, &
line 4214 : 112 chars : !$acc pdf_params_zm%corr_w_eta_2, pdf_params_zm%corr_chi_eta_1, pdf_params_zm%corr_chi_eta_2, &
line 4215 : 110 chars : !$acc pdf_params_zm%rsatl_1, pdf_params_zm%rsatl_2, pdf_params_zm%rc_1, pdf_params_zm%rc_2, &
line 4237 : 119 chars : if ( thlm_sponge_damp_settings%l_sponge_damping ) call finalize_tau_sponge_damp_api( thlm_sponge_damp_profile )
line 4238 : 118 chars : if ( rtm_sponge_damp_settings%l_sponge_damping ) call finalize_tau_sponge_damp_api( rtm_sponge_damp_profile )
line 4239 : 117 chars : if ( uv_sponge_damp_settings%l_sponge_damping ) call finalize_tau_sponge_damp_api( uv_sponge_damp_profile )
line 4240 : 118 chars : if ( wp2_sponge_damp_settings%l_sponge_damping ) call finalize_tau_sponge_damp_api( wp2_sponge_damp_profile )
line 4241 : 118 chars : if ( wp3_sponge_damp_settings%l_sponge_damping ) call finalize_tau_sponge_damp_api( wp3_sponge_damp_profile )
line 4242 : 122 chars : if ( up2_vp2_sponge_damp_settings%l_sponge_damping ) call finalize_tau_sponge_damp_api( up2_vp2_sponge_damp_profile )
line 4929 : 104 chars : clubb_config_flags%l_add_dycore_grid, clubb_config_flags%grid_adapt_in_time_method )
line 4937 : 106 chars : clubb_config_flags%l_add_dycore_grid, clubb_config_flags%grid_adapt_in_time_method )
line 4951 : 101 chars : 'be used for cases with forcings from an input file and for the atex ', &
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/clubb_tuner.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 654 : 102 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/clubb_driver_test.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 71 : 107 chars : write(fstderr, *) "This section ensures that everything allocated in init_clubb_case will be deallocated"
line 72 : 102 chars : write(fstderr, *) "in clean_up_clubb. This may cause a runtime error if there is a mismatch between"
----------------------------------------------------------------------------------------------------
CLUBBStandardsCheck.py has finished.
FAIL: 6 check(s) failed.
CLUBBStandardsCheck.py has begun.
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/advance_clubb_core_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 1876 : 101 chars : stats, & ! intent(inout)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/advance_xm_wpxp_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 779 : 101 chars : call wpxp_term_pr1_lhs( nzm, ngrdcol, gr, C6rt_Skw_fnc, C6thl_Skw_fnc, C7_Skw_fnc, & ! Intent(in)
line 780 : 101 chars : invrs_tau_C6_zm, l_scalar_calc, & ! Intent(in)
line 781 : 102 chars : lhs_pr1_wprtp, lhs_pr1_wpthlp, lhs_pr1_wpsclrp ) ! Intent(out)
line 854 : 102 chars : stats, & ! InOut
line 855 : 101 chars : rtm, wprtp, thlm, wpthlp, sclrm, wpsclrp, & ! InOut
line 856 : 101 chars : err_info ) ! InOut
line 896 : 101 chars : stats, & ! InOut
line 4881 : 108 chars : tmp_zm_stats(i,k) = (-gamma_over_implicit_ts*lhs_ta_wpxp(2+gr%grid_dir_indx,i,k)) * wpxp(i,km1) &
line 4883 : 105 chars : + (-gamma_over_implicit_ts*lhs_ta_wpxp(2-gr%grid_dir_indx,i,k)) * wpxp(i,kp1)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/sfc_varnce_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 723 : 105 chars : call sfc_varnce_check( sclr_dim, wp2(i,gr%k_lb_zm), up2(i,gr%k_lb_zm), & ! intent(in)
line 724 : 105 chars : vp2(i,gr%k_lb_zm), thlp2(i,gr%k_lb_zm), rtp2(i,gr%k_lb_zm), & ! intent(in)
line 725 : 105 chars : rtpthlp(i,gr%k_lb_zm), sclrp2(i,gr%k_lb_zm,:), & ! intent(in)
line 726 : 105 chars : sclrprtp(i,gr%k_lb_zm,:), sclrpthlp(i,gr%k_lb_zm,:), & ! intent(in)
line 727 : 108 chars : err_info ) ! intent(inout)
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--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/grid_adaptation_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 295 : 128 chars : write(fstderr, *) "The fixed minimum grid density momentum heights need to cover at least the domain of the physics grid."
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/pdf_parameter_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 295 : 101 chars : !$acc pdf_params%alpha_thl, pdf_params%alpha_rt, pdf_params%crt_1, pdf_params%crt_2, &
line 298 : 102 chars : !$acc pdf_params%stdev_eta_2, pdf_params%covar_chi_eta_1, pdf_params%covar_chi_eta_2, &
line 300 : 101 chars : !$acc pdf_params%corr_w_eta_2, pdf_params%corr_chi_eta_1, pdf_params%corr_chi_eta_2, &
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/clubb_api_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 2430 : 107 chars : ! calc_derrived_params_api - Adjusts values of background eddy diffusivity based on vertical grid spacing
line 2497 : 107 chars : ! calc_derrived_params_api - Adjusts values of background eddy diffusivity based on vertical grid spacing
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--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/stats_clubb_utilities.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 129 : 101 chars : wp2_zt, thlp2_zt, wpthlp_zt, wprtp_zt, rtp2_zt, rtpthlp_zt, up2_zt, vp2_zt, upwp_zt, vpwp_zt, &
line 130 : 101 chars : wpup2, wpvp2, a3_coef_zt, wp3_on_wp2_zt, w_up_in_cloud, w_down_in_cloud, cloudy_updraft_frac, &
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/advance_windm_edsclrm_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 493 : 102 chars : stats ) ! intent(inout)
line 501 : 102 chars : stats ) ! intent(inout)
line 953 : 103 chars : call windm_edsclrm_rhs( nzm, nzt, ngrdcol, gr, windm_edsclrm_scalar, dt, & ! intent(in)
line 954 : 103 chars : lhs_diff, edsclrm(:,:,edsclr), & ! intent(in)
line 955 : 103 chars : edsclrm_forcing(:,:,edsclr), & ! intent(in)
line 956 : 103 chars : rho_ds_zm, invrs_rho_ds_zt, & ! intent(in)
line 957 : 103 chars : l_imp_sfc_momentum_flux, wpedsclrp(:,gr%k_lb_zm,edsclr), & ! intent(in)
line 958 : 106 chars : stats, & ! intent(inout)
line 959 : 104 chars : rhs(:,:,edsclr) ) ! intent(out)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/setup_clubb_pdf_params.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 55 : 104 chars : subroutine setup_pdf_parameters_api( gr, nzm, nzt, ngrdcol, pdf_dim, hydromet_dim, dt, & ! Intent(in)
line 3823 : 104 chars : ! Correlation (in-precip) of chi (old s) and the precipitating hydrometeor in PDF component 1.
line 3827 : 104 chars : ! Correlation (in-precip) of chi (old s) and the precipitating hydrometeor in PDF component 2.
line 3841 : 104 chars : ! Correlation (in-precip) of eta (old t) and the precipitating hydrometeor in PDF component 1.
line 3845 : 104 chars : ! Correlation (in-precip) of eta (old t) and the precipitating hydrometeor in PDF component 2.
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/parameters_tunable.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 839 : 106 chars : / sqrt( 4.0_core_rknd * ( 1.0_core_rknd - 0.4_core_rknd )**3 &
line 840 : 118 chars : + clubb_params(ngrdcol,iSkw_max_mag)**2 ) ) ) ! Known magic number
line 902 : 117 chars : mult_factor_zt(i) = 1.0_core_rknd + clubb_params(i,imult_coef) * log( avg_deltaz(i) / grid_spacing_thresh )
line 917 : 104 chars : nu_vert_res_dep%nu10(i) = clubb_params(i,inu10) * mult_factor_zt(i) !We're unsure of the grid
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/mono_flux_limiter.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 700 : 104 chars : !$acc parallel loop gang vector collapse(2) default(present) reduction(.or.:l_any_adjustment_needed)
line 851 : 121 chars : ! MONOFLUX TEST COMMENT DO NOT REMOVE if( any(wpxp_net_adjust /= 0.0) ) write(fstderr,*) "MONOFLUX: wpxp adjusted "
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/model_flags.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 315 : 104 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
line 541 : 104 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
line 845 : 104 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
----------------------------------------------------------------------------------------------------
--------------------- Default Private Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/err_info_type_module.F90 ---------------------
WARNING: Missing default 'private' in the following modules:
line 4: module err_info_type_module
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/err_info_type_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 265 : 102 chars : write(err_info%err_header_global,'(A38, I3, A15, I3, A, A28, A33, F6.2, A1, F6.2, A, A39, A40)') &
line 276 : 105 chars : write(err_info%err_header(i),'(A38, I3, A15, I3, A, A22, I2, A11, F6.2, A13, F6.2, A, A39, A40)') &
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--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/penta_bicgstab_solver.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 419 : 110 chars : ! It's interesting to see how close E_inv is to the lhs diagonal, it's usually (visually) very close, but
line 420 : 104 chars : ! using it instead of E_inv requires so many more iterations (use it would be jacobi preconditioner)
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--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/advance_wp2_wp3_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 928 : 101 chars : stats, & ! intent(inout)
line 1742 : 105 chars : stats_tmp_zt(i,k) = - gamma_over_implicit_ts * wp3_term_ta_lhs_result(5,i,k) * wp3(i,k-1) &
line 1743 : 103 chars : - gamma_over_implicit_ts * wp3_term_ta_lhs_result(4,i,k) * wp2(i,k) &
line 1744 : 103 chars : - gamma_over_implicit_ts * wp3_term_ta_lhs_result(3,i,k) * wp3(i,k) &
line 1745 : 105 chars : - gamma_over_implicit_ts * wp3_term_ta_lhs_result(2,i,k) * wp2(i,k+1) &
line 1746 : 103 chars : - gamma_over_implicit_ts * wp3_term_ta_lhs_result(1,i,k) * wp3(i,k+1)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/fill_holes.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 234 : 113 chars : write(*,'(A6,I5,1X,I5,A4,E30.20,A3,E30.20)') "field(", i, k, ") = ", field(i,k), " < ", threshold
line 240 : 105 chars : write(fstderr, *) "column", i, " field average = ", sum(field(i,:) * rho_ds(i,:) * dz(i,:)) &
line 584 : 102 chars : ! rho_ds_dz(i,k-num_hf_draw_points:k+num_hf_draw_points))
line 823 : 110 chars : * min( threshold, field(i,k_start:k_end:grid_dir_indx) ) ) * invrs_denom
line 828 : 106 chars : + mass_fraction * ( min( threshold, field(i,k_start:k_end:grid_dir_indx) ) - threshold )
line 833 : 110 chars : * max( threshold, field(i,k_start:k_end:grid_dir_indx) ) ) * invrs_denom
line 840 : 108 chars : + mass_fraction * ( max( threshold, field(i,k_start:k_end:grid_dir_indx) ) - threshold )
----------------------------------------------------------------------------------------------------
----------------------------------------------------------------------------------------------------
--------------------- Implicit None Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/stats_netcdf.F90 ---------------------
WARNING: Missing 'implicit none' after these blocks:
line 281: subroutine stats_init_api( registry_path, output_path, ncol, stats_tsamp, stats_tout, dt_main, &
line 489: subroutine stats_finalize_api( stats, err_info )
line 565: subroutine stats_type_initialize( ncol, defs, ndefs, zt, zm, stats, ierr, rad_zt, rad_zm )
line 716: subroutine stats_open_netcdf( output_path, time_units, &
line 951: subroutine stats_begin_timestep_api( itime, stats )
line 1001: subroutine stats_end_timestep_api( time_value, stats, err_info )
line 1052: subroutine stats_update_scalar( name, values, stats, icol, level )
line 1112: subroutine stats_update_1d( name, values, stats, icol, level )
line 1172: subroutine stats_update_2d( name, values, stats, icol, level )
line 1235: subroutine stats_begin_budget_scalar( name, values, stats, icol )
line 1281: subroutine stats_begin_budget_1d( name, values, stats, icol )
line 1334: subroutine stats_begin_budget_2d( name, values, stats, icol )
line 1379: subroutine stats_update_budget_scalar( name, values, stats, icol, level )
line 1429: subroutine stats_update_budget_1d( name, values, stats, icol, level )
line 1479: subroutine stats_update_budget_2d( name, values, stats, icol, level )
line 1524: subroutine stats_finalize_budget_scalar( name, values, stats, icol, l_count_sample )
line 1590: subroutine stats_finalize_budget_1d( name, values, stats, icol, l_count_sample )
line 1663: subroutine stats_finalize_budget_2d( name, values, stats, icol, l_count_sample )
line 1729: subroutine stats_avg_and_write( time_value, stats, ierr )
line 1855: subroutine stats_grid_init( ncol, zt_src, zm_src, zt_tgt, zm_tgt, &
line 1917: subroutine stats_update_grid( zt_src, zm_src, rho_vals, rho_levels, p_sfc, stats )
line 1995: subroutine stats_lh_samples_init( num_samples, nzt, nl_var_names, u_var_names, zt_vals, &
line 2114: subroutine stats_lh_samples_write_lognormal( samples, stats, err_info )
line 2167: subroutine stats_lh_samples_write_uniform( uniform_vals, mixture_comp, sample_weights, &
line 2383: subroutine stats_lookup_append( stats, id )
line 2425: subroutine stats_lookup_reject_append( stats, name )
line 2539: subroutine stats_read_registry_namelist( path, defs, ndefs, ierr )
line 2614: subroutine stats_expand_registry( sclr_dim, edsclr_dim, defs, ndefs, hydromet_list )
line 2915: subroutine add_expanded_def( base_def, name, out_defs, nout )
line 2965: subroutine parse_registry_line( line, def, l_valid )
line 3039: subroutine split_registry_fields( line, fields, nfields )
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/stats_netcdf.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 235 : 103 chars : logical :: l_last_sample = .false. ! True if we want to output at the end of this sample
line 237 : 104 chars : logical :: l_different_output_grid = .false. ! True if we need to remap the variables before output
line 238 : 102 chars : logical :: l_output_rad_files = .false. ! True if we want to output radiation grid variables
line 526 : 101 chars : if ( allocated( stats%grid%rho_lin_spline_vals ) ) deallocate( stats%grid%rho_lin_spline_vals )
line 527 : 105 chars : if ( allocated( stats%grid%rho_lin_spline_levels ) ) deallocate( stats%grid%rho_lin_spline_levels )
line 803 : 104 chars : ret_code = nf90_def_var( stats%ncid, "time", NF90_DOUBLE, (/ stats%time_dimid /), stats%time_varid )
line 808 : 101 chars : ret_code = nf90_def_var( stats%ncid, "col", NF90_DOUBLE, (/ stats%col_dimid /), stats%col_varid )
line 828 : 121 chars : ret_code = nf90_def_var( stats%ncid, "lh_zt", NF90_DOUBLE, (/ stats%lh_2d%lh_zt_dimid /), stats%lh_2d%lh_zt_varid )
line 835 : 112 chars : ret_code = nf90_def_var( stats%ncid, "rad_zt", NF90_DOUBLE, (/ stats%rad_zt_dimid /), stats%rad_zt_varid )
line 839 : 112 chars : ret_code = nf90_def_var( stats%ncid, "rad_zm", NF90_DOUBLE, (/ stats%rad_zm_dimid /), stats%rad_zm_varid )
line 849 : 101 chars : (/ stats%param_strlen_dimid, stats%param_dimid /), stats%param_name_varid )
line 852 : 109 chars : ret_code = nf90_def_var( stats%ncid, "param", NF90_DOUBLE, (/ stats%param_dimid /), stats%param_varid )
line 912 : 110 chars : ret_code = nf90_put_att( stats%ncid, stats%vars(i)%varid, "long_name", trim( stats%vars(i)%long_name ) )
line 913 : 102 chars : ret_code = nf90_put_att( stats%ncid, stats%vars(i)%varid, "units", trim( stats%vars(i)%units ) )
line 920 : 108 chars : ret_code = nf90_put_var( stats%ncid, stats%col_varid, [( real( i, kind=core_rknd ), i=1, stats%ncol )] )
line 940 : 109 chars : ret_code = nf90_put_var( stats%ncid, stats%param_varid, [( real( i, kind=core_rknd ), i=1, nparams )] )
line 1815 : 101 chars : stats%grid%gr_source, stats%grid%gr_output, stats%vars(i)%nz, &
line 1816 : 107 chars : real( stats%vars(i)%buffer, kind=core_rknd ), stats%vars(i)%out_nz, &
line 1817 : 114 chars : size( stats%grid%rho_lin_spline_vals, 2 ), stats%grid%rho_lin_spline_vals, &
line 1973 : 101 chars : if ( allocated( stats%grid%rho_lin_spline_vals ) ) deallocate( stats%grid%rho_lin_spline_vals )
line 1974 : 105 chars : if ( allocated( stats%grid%rho_lin_spline_levels ) ) deallocate( stats%grid%rho_lin_spline_levels )
line 2416 : 116 chars : if ( stats%lookup%cache_len > 0 ) tmp(1:stats%lookup%cache_len) = stats%lookup%cache(1:stats%lookup%cache_len)
line 2461 : 105 chars : tmp(1:stats%lookup%reject_cache_len) = stats%lookup%reject_cache(1:stats%lookup%reject_cache_len)
line 2528 : 101 chars : write(date(32:33),'(i2.2)') nint( ( ( real( mod( nint( st_time ),3600 ),kind=time_precision ) / &
line 2605 : 101 chars : write( fstderr,* ) "Invalid stats registry entry (expected: name | grid | units | long_name)"
line 2706 : 101 chars : call add_expanded_def(base_def,"corr_chi_"//trim(hydromet_list(j)( 1:2 ))//"_1",out_defs,k)
line 2707 : 101 chars : call add_expanded_def(base_def,"corr_chi_"//trim(hydromet_list(j)( 1:2 ))//"_2",out_defs,k)
line 2714 : 101 chars : call add_expanded_def(base_def,"corr_eta_"//trim(hydromet_list(j)( 1:2 ))//"_1",out_defs,k)
line 2715 : 101 chars : call add_expanded_def(base_def,"corr_eta_"//trim(hydromet_list(j)( 1:2 ))//"_2",out_defs,k)
line 2722 : 101 chars : call add_expanded_def(base_def,"corr_Ncn_"//trim(hydromet_list(j)( 1:2 ))//"_1",out_defs,k)
line 2723 : 101 chars : call add_expanded_def(base_def,"corr_Ncn_"//trim(hydromet_list(j)( 1:2 ))//"_2",out_defs,k)
line 2730 : 113 chars : trim( hydromet_list(j2)( 1:min( 2,len_trim( hydromet_list(j2) ) ) ) )//"_1", &
line 2734 : 113 chars : trim( hydromet_list(j2)( 1:min( 2,len_trim( hydromet_list(j2) ) ) ) )//"_2", &
line 2740 : 101 chars : call add_expanded_def(base_def,"corr_w_"//trim(hydromet_list(j)( 1:2 ))//"_1_n",out_defs,k)
line 2741 : 101 chars : call add_expanded_def(base_def,"corr_w_"//trim(hydromet_list(j)( 1:2 ))//"_2_n",out_defs,k)
line 2748 : 103 chars : call add_expanded_def(base_def,"corr_chi_"//trim(hydromet_list(j)( 1:2 ))//"_1_n",out_defs,k)
line 2749 : 103 chars : call add_expanded_def(base_def,"corr_chi_"//trim(hydromet_list(j)( 1:2 ))//"_2_n",out_defs,k)
line 2756 : 103 chars : call add_expanded_def(base_def,"corr_eta_"//trim(hydromet_list(j)( 1:2 ))//"_1_n",out_defs,k)
line 2757 : 103 chars : call add_expanded_def(base_def,"corr_eta_"//trim(hydromet_list(j)( 1:2 ))//"_2_n",out_defs,k)
line 2764 : 103 chars : call add_expanded_def(base_def,"corr_Ncn_"//trim(hydromet_list(j)( 1:2 ))//"_1_n",out_defs,k)
line 2765 : 103 chars : call add_expanded_def(base_def,"corr_Ncn_"//trim(hydromet_list(j)( 1:2 ))//"_2_n",out_defs,k)
line 2772 : 115 chars : trim( hydromet_list(j2)( 1:min( 2,len_trim( hydromet_list(j2) ) ) ) )//"_1_n", &
line 2776 : 115 chars : trim( hydromet_list(j2)( 1:min( 2,len_trim( hydromet_list(j2) ) ) ) )//"_2_n", &
line 2813 : 112 chars : trim( hydromet_list(j2)( 1:min( 2,len_trim( hydromet_list(j2) ) ) ) )//"p", &
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/CLUBB_core/advance_xp2_xpyp_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 1320 : 101 chars : sclrprtp(:,:,sclr) ) ! Intent(inout)
line 1353 : 102 chars : sclrpthlp(:,:,sclr) ) ! Intent(inout)
line 3042 : 101 chars : stats_tmp(i,k) = (-gamma_over_implicit_ts * lhs_ta(2+gr%grid_dir_indx,i,k)) * xapxbp(i,km1) &
----------------------------------------------------------------------------------------------------
CLUBBStandardsCheck.py has finished.
FAIL: 20 check(s) failed.
CLUBBStandardsCheck.py has begun.
----------------------------------------------------------------------------------------------------
--------------------- Implicit None Check: /home/jenkins/workspace/clubb_driver_test/src/SILHS/mt95.F90 ---------------------
WARNING: Missing 'implicit none' after these blocks:
line 362: subroutine init_by_type( put, get )
line 382: subroutine init_by_scalar( put )
line 413: subroutine init_by_array( put )
line 461: subroutine next_state( )
line 593: subroutine genrand_int32_0d( y )
line 614: subroutine genrand_int32_1d( y )
line 629: subroutine genrand_int32_2d( y )
line 644: subroutine genrand_int32_3d( y )
line 659: subroutine genrand_int32_4d( y )
line 674: subroutine genrand_int32_5d( y )
line 689: subroutine genrand_int32_6d( y )
line 704: subroutine genrand_int32_7d( y )
line 720: subroutine genrand_int31_0d( y )
line 732: subroutine genrand_int31_1d( y )
line 747: subroutine genrand_int31_2d( y )
line 762: subroutine genrand_int31_3d( y )
line 777: subroutine genrand_int31_4d( y )
line 792: subroutine genrand_int31_5d( y )
line 807: subroutine genrand_int31_6d( y )
line 822: subroutine genrand_int31_7d( y )
line 838: subroutine genrand_real1_0d( r )
line 853: subroutine genrand_real1_1d( r )
line 868: subroutine genrand_real1_2d( r )
line 883: subroutine genrand_real1_3d( r )
line 898: subroutine genrand_real1_4d( r )
line 913: subroutine genrand_real1_5d( r )
line 928: subroutine genrand_real1_6d( r )
line 943: subroutine genrand_real1_7d( r )
line 959: subroutine genrand_real2_0d( r )
line 974: subroutine genrand_real2_1d( r )
line 989: subroutine genrand_real2_2d( r )
line 1004: subroutine genrand_real2_3d( r )
line 1019: subroutine genrand_real2_4d( r )
line 1034: subroutine genrand_real2_5d( r )
line 1049: subroutine genrand_real2_6d( r )
line 1064: subroutine genrand_real2_7d( r )
line 1080: subroutine genrand_real3_0d( r )
line 1095: subroutine genrand_real3_1d( r )
line 1110: subroutine genrand_real3_2d( r )
line 1125: subroutine genrand_real3_3d( r )
line 1140: subroutine genrand_real3_4d( r )
line 1155: subroutine genrand_real3_5d( r )
line 1170: subroutine genrand_real3_6d( r )
line 1185: subroutine genrand_real3_7d( r )
line 1201: subroutine genrand_res53_0d( r )
line 1218: subroutine genrand_res53_1d( r )
line 1233: subroutine genrand_res53_2d( r )
line 1248: subroutine genrand_res53_3d( r )
line 1263: subroutine genrand_res53_4d( r )
line 1278: subroutine genrand_res53_5d( r )
line 1293: subroutine genrand_res53_6d( r )
line 1308: subroutine genrand_res53_7d( r )
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/SILHS/latin_hypercube_driver_module.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 113 : 101 chars : ! The uniform distribution corresponds to all the same variables as X_nl,
line 410 : 105 chars : !$acc update host(X_u_all_levs,l_in_precip,lh_sample_point_weights,X_mixt_comp_all_levs,k_lh_start)
----------------------------------------------------------------------------------------------------
CLUBBStandardsCheck.py has finished.
FAIL: 2 check(s) failed.
CLUBBStandardsCheck.py has begun.
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/wangara.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 104 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 105 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/mpace_a.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 272 : 103 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 273 : 102 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Default Private Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/prescribe_forcings.F90 ---------------------
WARNING: Missing default 'private' in the following modules:
line 1: module prescribe_forcings_module
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/prescribe_forcings.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 297 : 104 chars : !$acc enter data create( um_bot, vm_bot, rtm_bot, thlm_bot, rho_bot, exner_bot, z_bot, ustar, ubar )
line 471 : 118 chars : !$acc update device( wm_zt, wm_zm, thlm_forcing, rtm_forcing, um_ref, vm_ref, sclrm_forcing, edsclrm_forcing )
line 911 : 103 chars : !$acc exit data delete( um_bot, vm_bot, rtm_bot, thlm_bot, rho_bot, exner_bot, z_bot, ustar, ubar )
line 1114 : 101 chars : gr%zm(i,km1), gr%zm(i,k00), gr%zm(i,kp1), gr%zm(i,kp2), &
line 1118 : 101 chars : gr%zm(i,km1), gr%zm(i,k00), gr%zm(i,kp1), gr%zm(i,kp2), &
line 1122 : 101 chars : gr%zm(i,km1), gr%zm(i,k00), gr%zm(i,kp1), gr%zm(i,kp2), &
line 1123 : 112 chars : exner_zm(i,km1), exner_zm(i,k00), exner_zm(i,kp1), exner_zm(i,kp2) )
line 1126 : 101 chars : gr%zm(i,km1), gr%zm(i,k00), gr%zm(i,kp1), gr%zm(i,kp2), &
line 1127 : 108 chars : thlm_zm(i,km1), thlm_zm(i,k00), thlm_zm(i,kp1), thlm_zm(i,kp2) )
line 1130 : 101 chars : gr%zm(i,km1), gr%zm(i,k00), gr%zm(i,kp1), gr%zm(i,kp2), &
line 1131 : 104 chars : rtm_zm(i,km1), rtm_zm(i,k00), rtm_zm(i,kp1), rtm_zm(i,kp2) )
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/rico.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 159 : 103 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 160 : 102 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/dycoms2_rf02.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 121 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 122 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/bomex.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 127 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 128 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/dycoms2_rf01.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 91 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 92 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/gabls2.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 152 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 153 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/mpace_b.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 157 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 158 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/Benchmark_cases/lba.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 96 : 105 chars : if ( sclr_idx%iiedsclr_thl > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_thl) = thlm_forcing(i,k)
line 97 : 104 chars : if ( sclr_idx%iiedsclr_rt > 0 ) edsclrm_forcing(i,k,sclr_idx%iiedsclr_rt) = rtm_forcing(i,k)
line 176 : 101 chars : wpthlp_sfc(i) = convert_sens_ht_to_km_s( ( 270._core_rknd * ft**1.5_core_rknd ), rho_sfc(i) )
line 177 : 101 chars : wprtp_sfc(i) = convert_latent_ht_to_m_s( ( 554._core_rknd * ft**1.3_core_rknd ), rho_sfc(i) )
----------------------------------------------------------------------------------------------------
CLUBBStandardsCheck.py has finished.
FAIL: 11 check(s) failed.
No matches for /home/jenkins/workspace/clubb_driver_test/src/KK_microphys/
CLUBBStandardsCheck.py has begun.
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/G_unit_test_types/pdf_parameter_tests.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 550 : 104 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
----------------------------------------------------------------------------------------------------
--------------------- Default Private Check: /home/jenkins/workspace/clubb_driver_test/src/G_unit_test_types/rev_direction_grid_test.F90 ---------------------
WARNING: Missing default 'private' in the following modules:
line 1: module rev_direction_grid_test
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/G_unit_test_types/rev_direction_grid_test.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 233 : 113 chars : !seed used = -1102123834 1480475276 -248259584 525496705 1614213535 -1267052688 6290033 -78466652
line 234 : 127 chars : !seed_output = (/ -1102123834, 1480475276, -248259584, 525496705, 1614213535, -1267052688, 6290033, -78466652 /)
line 750 : 101 chars : call xpyp_term_ta_pdf_lhs_godunov( gr_ascending%nzm, gr_ascending%nzt, 1, gr_ascending, & ! In
line 754 : 104 chars : call xpyp_term_ta_pdf_lhs_godunov( gr_descending%nzm, gr_descending%nzt, 1, gr_descending, & ! In
line 795 : 101 chars : call xpyp_term_ta_pdf_rhs_godunov( gr_ascending%nzm, gr_ascending%nzt, 1, gr_ascending, & ! In
line 801 : 104 chars : call xpyp_term_ta_pdf_rhs_godunov( gr_descending%nzm, gr_descending%nzt, 1, gr_descending, & ! In
----------------------------------------------------------------------------------------------------
--------------------- Default Private Check: /home/jenkins/workspace/clubb_driver_test/src/G_unit_test_types/fill_holes_tests.F90 ---------------------
WARNING: Missing default 'private' in the following modules:
line 19: module fill_holes_tests
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/G_unit_test_types/fill_holes_tests.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 162 : 102 chars : field_initial(i,k) = 10_core_rknd * ( sin( 8.0 * pi * ( k + i ) / nz ) + one ) &
line 180 : 110 chars : if ( l_print_name ) print *, "filling holes of: easy_fill_test_"//trim(fill_type_names(fill_type))
line 195 : 121 chars : write(*,'(A6,I5,1X,I5,A4,E30.20,A3,E30.20)') "field(", i, k, ") = ", field(i,k), " < ", threshold
line 241 : 118 chars : if ( l_print_name ) print *, "filling holes of: reverse_easy_fill_test_"//trim(fill_type_names(fill_type))
line 344 : 102 chars : field_initial(i,k) = 10_core_rknd * ( sin( 8.0 * pi * ( k + i ) / nz ) + one ) &
line 363 : 113 chars : if ( l_print_name ) print *, "filling holes of: below_thresh_test_"//trim(fill_type_names(fill_type))
line 385 : 103 chars : print *, "-- error", two * abs( initial_mass - new_mass ) / ( initial_mass + new_mass )
line 419 : 121 chars : if ( l_print_name ) print *, "filling holes of: reverse_below_thresh_test_"//trim(fill_type_names(fill_type))
line 430 : 116 chars : print *, "ERROR in below_thresh_test REVERSE MODE: method was not conservative in grid reverse mode"
----------------------------------------------------------------------------------------------------
--------------------- Line Length Check: /home/jenkins/workspace/clubb_driver_test/src/G_unit_test_types/spurious_source_test.F90 ---------------------
WARNING: Lines exceed 100 characters (limit 100):
line 500 : 104 chars : l_prescribed_avg_deltaz, & ! used in calc_derrived_params_api. If .true., avg_deltaz = deltaz
----------------------------------------------------------------------------------------------------
CLUBBStandardsCheck.py has finished.
FAIL: 6 check(s) failed.
[91m===============================================================
[91mCLUBBStandardsCheck FAILED
[91m THIS IS PRINTED IN ALL RED, CAPITAL LETTERS, AND USES
[91m AN EXCLAMATION MARK TO ENSURE THE DEVELOPERS FEEL SHAME!
[91m IF YOU ARE ONE OF THESE "DEVELOPERS" CHECK THE
[91m LOG FILE FOR DETAILS: /home/jenkins/workspace/clubb_driver_test/build/ifx_PRECdouble/cmake_build_output.txt
[91m===============================================================[0m
[93mBuild completed successfully, but some source code checks have failed.[0m
+ ulimit -s 8388608
+ run_scripts/run_scm_all.py -ngrdcol 4 -max_iters 500 -out_dir standalone_output_ifx
Performing standard run
Using 8 process(es)
Cases to run: arm, arm_97, astex_a209, atex, bomex, cgils_s6, cgils_s11, cgils_s12, clex9_nov02, clex9_oct14, dycoms2_rf01, dycoms2_rf01_fixed_sst, dycoms2_rf02_do, dycoms2_rf02_ds, dycoms2_rf02_nd, dycoms2_rf02_so, fire, gabls2, gabls3, gabls3_night, jun25_altocu, lba, mc3e, mpace_a, mpace_b, mpace_b_silhs, nov11_altocu, rico, rico_silhs, twp_ice, wangara
COMPLETE -- bomex
COMPLETE -- cgils_s12
COMPLETE -- cgils_s11
COMPLETE -- arm
COMPLETE -- cgils_s6
ERROR -- dycoms2_rf01_fixed_sst
Duplicating params
- Initial values file: '/home/jenkins/workspace/clubb_driver_test/run_scripts/../input/tunable_parameters/tunable_parameters.in'
- Duplicating '4' times.
Writing to '/home/jenkins/workspace/clubb_driver_test/tmp_dup_params.in':
- ngrdcol = 4
- using executable: /home/jenkins/workspace/clubb_driver_test/run_scripts/../install/latest/clubb_standalone
=================== Running dycoms2_rf01_fixed_sst ===================
2026/03/16 03:54:43
--------------------------------------------------
Latest git log entry
--------------------------------------------------
A detailed git diff can be found at the end of this file
--------------------------------------------------
Tunable Parameters:
--------------------------------------------------
--------------------------------------------------
Preprocessing Directives:
--------------------------------------------------
-DNETCDF enabled
-DCOAMPS_MICRO enabled
-DTUNER disabled
-DSILHS enabled
-Dnooverlap enabled
-Draoffline enabled
-DUSE_BUGSrad_ocast_random disabled
-DBYTESWAP_IO disabled
--------------------------------------------------
&model_setting
--------------------------------------------------
runtype = dycoms2_rf01
nzmax = 48
grid_type = 3
deltaz = 10.0000000000000 10.0000000000000
10.0000000000000 10.0000000000000
zm_init = 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000
zm_top = 5000.00000000000 5000.00000000000
5000.00000000000 5000.00000000000
zt_grid_fname =
zm_grid_fname = ../input/grid/48_level_zm_grid.grd
day = 10
month = 7
year = 2001
lat_vals = 31.5000000000000
lon_vals = -122.000000000000
sfc_elevation = 0.000000000000000E+000
time_initial = 21600.0000000000
time_final = 171600.000000000
dt_main = 300.000000000000
dt_rad = 300.000000000000
sfctype = 1
T_sfc = 288.000000000000 288.000000000000
288.000000000000 288.000000000000
p_sfc = 101700.000000000 101700.000000000
101700.000000000 101700.000000000
sens_ht = 0.000000000000000E+000
latent_ht = 0.000000000000000E+000
fcor = 7.600000000000000E-005 7.600000000000000E-005 7.600000000000000E-005
7.600000000000000E-005
fcor_y = 1.243490415639306E-004 1.243490415639306E-004
1.243490415639306E-004 1.243490415639306E-004
T0 = 300.000000000000
ts_nudge = 86400.0000000000
forcings_file_path =
l_t_dependent = T
l_ignore_forcings = T
l_modify_ic_with_cubic_int = F
l_modify_bc_for_cnvg_test = F
l_input_xpwp_sfc = F
saturation_formula = 3
thlm_sponge_damp_settings%l_sponge_damping = F
rtm_sponge_damp_settings%l_sponge_damping = F
uv_sponge_damp_settings%l_sponge_damping = F
wp2_sponge_damp_settings%l_sponge_damping = F
wp3_sponge_damp_settings%l_sponge_damping = F
up2_vp2_sponge_damp_settings%l_sponge_damping = F
thlm_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
thlm_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
rtm_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
rtm_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
uv_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
uv_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
uv_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
wp2_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
wp2_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
wp3_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
wp3_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
l_soil_veg = F
l_restart = F
l_input_fields = F
restart_path_case = restart/dycoms2_rf01
time_restart = 0.000000000000000E+000
debug_level = 2
sclr_dim = 0
edsclr_dim = 0
iisclr_thl = -2
iisclr_rt = -1
iisclr_CO2 = -1
sclr_tol =
--------------------------------------------------
&stats_setting
--------------------------------------------------
l_stats = T
fname_prefix = dycoms2_rf01_fixed_sst
stats_fmt = netcdf
stats_tsamp = 300.000000000000
stats_tout = 300.000000000000
l_allow_small_stats_tout = F
Constant flags:
l_pos_def = F
l_gamma_Skw = T
l_byteswap_io = F
Constant tolerances [units]
rt_tol [kg/kg] = 1.000000000000000E-008
thl_tol [K] = 1.000000000000000E-002
w_tol [m/s] = 2.000000000000000E-002
Parameter Value
--------- -----
C1 = 1.00000000000000000000
C1b = 1.00000000000000000000
C1c = 1.00000000000000000000
C2rt = 2.00000000000000000000
C2thl = 2.00000000000000000000
C2rtthl = 2.00000000000000000000
C4 = 2.00000000000000000000
C_uu_shr = 0.40000000000000002220
C_uu_buoy = 0.29999999999999998890
C6rt = 2.00000000000000000000
C6rtb = 2.00000000000000000000
C6rtc = 1.00000000000000000000
C6thl = 2.00000000000000000000
C6thlb = 2.00000000000000000000
C6thlc = 1.00000000000000000000
C7 = 0.50000000000000000000
C7b = 0.50000000000000000000
C7c = 0.50000000000000000000
C8 = 0.50000000000000000000
C8b = 0.02000000000000000042
C10 = 3.29999999999999982236
C11 = 0.40000000000000002220
C11b = 0.40000000000000002220
C11c = 0.50000000000000000000
C12 = 1.00000000000000000000
C13 = 0.10000000000000000555
C14 = 1.00000000000000000000
C_wp2_pr_dfsn = 0.00000000000000000000
C_wp3_pr_tp = 0.00000000000000000000
C_wp3_pr_turb = 1.00000000000000000000
C_wp3_pr_dfsn = 0.00000000000000000000
C_wp2_splat = 0.00000000000000000000
C6rt_Lscale0 = 14.00000000000000000000
C6thl_Lscale0 = 14.00000000000000000000
C7_Lscale0 = 0.84999999999999997780
wpxp_L_thresh = 60.00000000000000000000
c_K = 0.20000000000000001110
c_K1 = 0.20000000000000001110
nu1 = 20.00000000000000000000
c_K2 = 0.02500000000000000139
nu2 = 1.00000000000000000000
c_K6 = 0.37500000000000000000
nu6 = 5.00000000000000000000
c_K8 = 5.00000000000000000000
nu8 = 20.00000000000000000000
c_K9 = 0.10000000000000000555
nu9 = 10.00000000000000000000
nu10 = 0.00000000000000000000
c_K_hm = 0.75000000000000000000
c_K_hmb = 0.75000000000000000000
K_hm_min_coef = 0.10000000000000000555
nu_hm = 1.50000000000000000000
slope_coef_spread_DG_means_w = 21.00000000000000000000
pdf_component_stdev_factor_w = 1.00000000000000000000
coef_spread_DG_means_rt = 0.80000000000000004441
coef_spread_DG_means_thl = 0.80000000000000004441
gamma_coef = 0.25000000000000000000
gamma_coefb = 0.25000000000000000000
gamma_coefc = 5.00000000000000000000
mu = 0.00100000000000000002
beta = 1.00000000000000000000
lmin_coef = 0.50000000000000000000
omicron = 0.50000000000000000000
zeta_vrnce_rat = 0.00000000000000000000
upsilon_precip_frac_rat = 0.55000000000000004441
lambda0_stability_coef = 0.02999999999999999889
mult_coef = 0.50000000000000000000
taumin = 90.00000000000000000000
taumax = 3600.00000000000000000000
Lscale_mu_coef = 2.00000000000000000000
Lscale_pert_coef = 0.10000000000000000555
alpha_corr = 0.14999999999999999445
Skw_denom_coef = 4.00000000000000000000
c_K10 = 1.00000000000000000000
c_K10h = 1.00000000000000000000
thlp2_rad_coef = 1.00000000000000000000
thlp2_rad_cloud_frac_thresh = 0.10000000000000000555
up2_sfc_coef = 4.00000000000000000000
Skw_max_mag = 10.00000000000000000000
C_invrs_tau_bkgnd = 1.10000000000000008882
C_invrs_tau_sfc = 0.10000000000000000555
C_invrs_tau_shear = 0.14999999999999999445
C_invrs_tau_N2 = 0.40000000000000002220
C_invrs_tau_N2_wp2 = 0.20000000000000001110
C_invrs_tau_N2_xp2 = 0.05000000000000000278
C_invrs_tau_N2_wpxp = 0.00000000000000000000
C_invrs_tau_N2_clear_wp3 = 1.00000000000000000000
C_invrs_tau_wpxp_Ri = 0.34999999999999997780
C_invrs_tau_wpxp_N2_thresh = 0.00033000000000000000
xp3_coef_base = 0.25000000000000000000
xp3_coef_slope = 0.01000000000000000021
altitude_threshold = 100.00000000000000000000
rtp2_clip_coef = 0.50000000000000000000
Cx_min = 0.33000000000000001554
Cx_max = 0.94999999999999995559
Richardson_num_min = 0.25000000000000000000
Richardson_num_max = 400.00000000000000000000
a3_coef_min = 1.00000000000000000000
a_const = 1.80000000000000004441
bv_efold = 5.00000000000000000000
wpxp_Ri_exp = 0.50000000000000000000
z_displace = 25.00000000000000000000
--------------------------------------------------
µphysics_setting
--------------------------------------------------
microphys_scheme = none
l_cloud_sed = F
sigma_g = 1.50000000000000
l_graupel = F
l_hail = F
l_seifert_beheng = F
l_predict_Nc = F
l_const_Nc_in_cloud = F
specify_aerosol = morrison_lognormal
l_subgrid_w = T
l_arctic_nucl = F
l_cloud_edge_activation = F
l_fix_pgam = F
l_in_cloud_Nc_diff = T
l_var_covar_src = F
l_upwind_diff_sed = F
lh_microphys_type = disabled
lh_num_samples = 2
lh_sequence_length = 1
lh_seed = 5489
l_fix_w_chi_eta_correlations = T
l_silhs_KK_convergence_adj_mean = F
importance_prob_thresh = 1.000000000000000E-008
host_dx = 1000000.00000000
host_dy = 1000000.00000000
hmp2_ip_on_hmm2_ip_slope%rr = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%ri = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%rs = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%rg = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%Nr = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%Ni = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%Ni = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_slope%Ng = 2.120000000000000E-005
hmp2_ip_on_hmm2_ip_intrcpt%rr = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%ri = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%rs = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%rg = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Nr = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.540000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.540000000000000
Ncnp2_on_Ncnm2 = 1.00000000000000
C_evap = 0.860000000000000
r_0 = 2.500000000000000E-005
microphys_start_time = 0.000000000000000E+000
Nc0_in_cloud = 100000000.000000
ccnconst = 120.000000000000
ccnexpnt = 0.400000005960464
aer_rm1 = 1.100000002196566E-008
aer_rm2 = 5.999999785899490E-008
aer_n1 = 125000000.000000
aer_n2 = 65000000.0000000
aer_sig1 = 1.20000004768372
aer_sig2 = 1.70000004768372
pgam_fixed = 5.00000000000000
precip_frac_calc_type = 2
--------------------------------------------------
&SILHS_setting
--------------------------------------------------
Warning: missing correlation input file(s): ../input/case_setups/dycoms2_rf01_c
orr_array_cloud.in and/or ../input/case_setups/dycoms2_rf01_corr_array_below.in
The default correlation arrays will be used.
--------------------------------------------------
&radiation_setting
--------------------------------------------------
rad_scheme = simplified
sol_const = 1367.00000000000
alvdr = 0.100000000000000
alvdf = 0.100000000000000
alndr = 0.100000000000000
alndf = 0.100000000000000
radiation_top = 50000.0000000000
F0 = 70.0000000000000
F1 = 22.0000000000000
kappa = 85.0000000000000
gc = 0.850000000000000
omega = 0.992000000000000
slr = 1.00000000000000
l_rad_above_cloud = T
l_sw_radiation = T
l_fix_cos_solar_zen = F
l_use_default_std_atmosphere = T
Fs_values = 1212.75000000000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
cos_solar_zen_values = -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
cos_solar_zen_times = -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
eff_drop_radius = 1.000000000000000E-005
--------------------------------------------------
&configurable_clubb_flags_nl
--------------------------------------------------
iiPDF_type = 1
ipdf_call_placement = 2
penta_solve_method = 2
tridiag_solve_method = 2
grid_remap_method = 1
grid_adapt_in_time_method = 0
l_use_precip_frac = T
l_predict_upwp_vpwp = T
l_ho_nontrad_coriolis = F
l_ho_trad_coriolis = F
l_min_wp2_from_corr_wx = F
l_min_xp2_from_corr_wx = T
l_C2_cloud_frac = F
l_diffuse_rtm_and_thlm = F
l_stability_correct_Kh_N2_zm = F
l_calc_thlp2_rad = T
l_upwind_xpyp_ta = T
l_upwind_xm_ma = T
l_uv_nudge = F
l_rtm_nudge = F
l_tke_aniso = T
l_vert_avg_closure = F
l_trapezoidal_rule_zt = F
l_trapezoidal_rule_zm = F
l_call_pdf_closure_twice = F
l_standard_term_ta = F
l_partial_upwind_wp3 = F
l_godunov_upwind_wpxp_ta = F
l_godunov_upwind_xpyp_ta = F
l_use_cloud_cover = F
l_diagnose_correlations = F
l_calc_w_corr = F
l_const_Nc_in_cloud = F
l_fix_w_chi_eta_correlations = T
l_stability_correct_tau_zm = F
l_damp_wp2_using_em = T
l_do_expldiff_rtm_thlm = F
l_Lscale_plume_centered = F
l_diag_Lscale_from_tau = T
l_use_C7_Richardson = T
l_use_C11_Richardson = F
l_use_shear_Richardson = F
l_brunt_vaisala_freq_moist = F
l_use_thvm_in_bv_freq = F
l_rcm_supersat_adj = T
l_damp_wp3_Skw_squared = T
l_prescribed_avg_deltaz = F
l_lmm_stepping = F
l_e3sm_config = F
l_vary_convect_depth = F
l_use_tke_in_wp3_pr_turb_term = T
l_use_tke_in_wp2_wp3_K_dfsn = F
l_use_wp3_lim_with_smth_Heaviside = F
l_smooth_Heaviside_tau_wpxp = T
l_modify_limiters_for_cnvg_test = F
l_enable_relaxed_clipping = F
l_linearize_pbl_winds = F
l_mono_flux_lim_thlm = T
l_mono_flux_lim_rtm = T
l_mono_flux_lim_um = T
l_mono_flux_lim_vm = T
l_mono_flux_lim_spikefix = T
l_host_applies_sfc_fluxes = F
l_wp2_fill_holes_tke = T
l_add_dycore_grid = F
--------------------------------------------------
git diff src/
--------------------------------------------------
See *setup.txt file in output folder
Path to sounding: dycoms2_rf01_sounding.in
File exists? T
Path to sclr_sounding: dycoms2_rf01_sclr_sounding.in
File exists? T
Path to edsclr_sounding: dycoms2_rf01_edsclr_sounding.in
File exists? T
Reading in sounding information
z = 0.000000000000000E+000 600.000000000000 650.000000000000
840.000000000000 840.500000000000 860.000000000000
900.000000000000 1000.00000000000 1100.00000000000
1200.00000000000 1300.00000000000 1400.00000000000
1500.00000000000 1600.00000000000 1700.00000000000
1800.00000000000 2400.00000000000 5000.00000000000
u = 7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
v = -5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
ug = 7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
7.00000000000000 7.00000000000000 7.00000000000000
vg = -5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
-5.50000000000000 -5.50000000000000 -5.50000000000000
theta = 289.000000000000 289.000000000000
289.000000000000 289.000000000000 297.500000000000
300.210000000000 301.410000000000 302.930000000000
303.880000000000 304.610000000000 305.220000000000
305.740000000000 306.200000000000 306.620000000000
307.220000000000 307.820000000000 311.420000000000
327.020000000000
rt = 8.999999999999999E-003 8.999999999999999E-003 8.999999999999999E-003
8.999999999999999E-003 1.500000000000000E-003 1.500000000000000E-003
1.500000000000000E-003 1.500000000000000E-003 1.500000000000000E-003
1.500000000000000E-003 1.500000000000000E-003 1.500000000000000E-003
1.500000000000000E-003 1.500000000000000E-003 1.500000000000000E-003
1.500000000000000E-003 1.500000000000000E-003 1.500000000000000E-003
p_in_Pa = -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000
subs = 0.000000000000000E+000 -2.250000000000000E-003 -2.437500000000000E-003
-3.150000000000000E-003 -3.151875000000000E-003 -3.225000000000000E-003
-3.375000000000000E-003 -3.750000000000000E-003 -4.125000000000000E-003
-4.500000000000001E-003 -4.875000000000000E-003 -5.250000000000000E-003
-5.625000000000000E-003 -6.000000000000000E-003 -5.250000000000000E-003
-4.500000000000001E-003 0.000000000000000E+000 0.000000000000000E+000
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
stats init: error reading registry
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
FATAL ERROR in stats_init_api
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in prescribe_forcings:
CLUBB-TIMER time_loop_init = 0.0000
CLUBB-TIMER time_clubb_advance = 0.0000
CLUBB-TIMER time_clubb_pdf = 0.0000
CLUBB-TIMER time_SILHS = 0.0000
CLUBB-TIMER time_microphys_scheme = 0.0000
CLUBB-TIMER time_microphys_advance = 0.0000
CLUBB-TIMER time_loop_end = 0.0000
CLUBB-TIMER time_adapt_grid = 0.0000
CLUBB-TIMER time_total = 0.0000
Fatal error in clubb, check your parameter values and timestep
COMPLETE -- atex
COMPLETE -- astex_a209
COMPLETE -- dycoms2_rf02_nd
COMPLETE -- fire
COMPLETE -- dycoms2_rf01
COMPLETE -- dycoms2_rf02_so
COMPLETE -- gabls3_night
COMPLETE -- clex9_nov02
COMPLETE -- arm_97
ERROR -- lba
Duplicating params
- Initial values file: '/home/jenkins/workspace/clubb_driver_test/run_scripts/../input/tunable_parameters/tunable_parameters.in'
- Duplicating '4' times.
Writing to '/home/jenkins/workspace/clubb_driver_test/tmp_dup_params.in':
- ngrdcol = 4
- using executable: /home/jenkins/workspace/clubb_driver_test/run_scripts/../install/latest/clubb_standalone
=================== Running lba ===================
2026/03/16 03:54:56
--------------------------------------------------
Latest git log entry
--------------------------------------------------
A detailed git diff can be found at the end of this file
--------------------------------------------------
Tunable Parameters:
--------------------------------------------------
--------------------------------------------------
Preprocessing Directives:
--------------------------------------------------
-DNETCDF enabled
-DCOAMPS_MICRO enabled
-DTUNER disabled
-DSILHS enabled
-Dnooverlap enabled
-Draoffline enabled
-DUSE_BUGSrad_ocast_random disabled
-DBYTESWAP_IO disabled
--------------------------------------------------
&model_setting
--------------------------------------------------
runtype = lba
nzmax = 128
grid_type = 2
deltaz = 75.0000000000000 75.0000000000000
75.0000000000000 75.0000000000000
zm_init = 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000
zm_top = 28625.0000000000 28625.0000000000
28625.0000000000 28625.0000000000
zt_grid_fname = ../input/grid/deep_convection_128lev_27km_zt_grid.grd
zm_grid_fname =
day = 23
month = 2
year = 1999
lat_vals = -10.8667000000000
lon_vals = -61.9500000000000
sfc_elevation = 0.000000000000000E+000
time_initial = 41400.0000000000
time_final = 63000.0000000000
dt_main = 60.0000000000000
dt_rad = 60.0000000000000
sfctype = 1
T_sfc = 288.000000000000 288.000000000000
288.000000000000 288.000000000000
p_sfc = 99129.9998800000 99129.9998800000
99129.9998800000 99129.9998800000
sens_ht = 0.000000000000000E+000
latent_ht = 0.000000000000000E+000
fcor = 3.760000000000000E-005 3.760000000000000E-005 3.760000000000000E-005
3.760000000000000E-005
fcor_y = 1.432248624704857E-004 1.432248624704857E-004
1.432248624704857E-004 1.432248624704857E-004
T0 = 300.000000000000
ts_nudge = 7200.00000000000
forcings_file_path = ../input/case_setups/lba_forcings/
l_t_dependent = T
l_ignore_forcings = T
l_modify_ic_with_cubic_int = F
l_modify_bc_for_cnvg_test = F
l_input_xpwp_sfc = F
saturation_formula = 3
thlm_sponge_damp_settings%l_sponge_damping = F
rtm_sponge_damp_settings%l_sponge_damping = F
uv_sponge_damp_settings%l_sponge_damping = F
wp2_sponge_damp_settings%l_sponge_damping = F
wp3_sponge_damp_settings%l_sponge_damping = F
up2_vp2_sponge_damp_settings%l_sponge_damping = F
thlm_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
thlm_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
rtm_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
rtm_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
uv_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
uv_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
uv_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
wp2_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
wp2_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
wp3_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
wp3_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
l_soil_veg = F
l_restart = F
l_input_fields = F
restart_path_case = restart/lba
time_restart = 0.000000000000000E+000
debug_level = 2
sclr_dim = 0
edsclr_dim = 0
iisclr_thl = -2
iisclr_rt = -1
iisclr_CO2 = -1
sclr_tol =
--------------------------------------------------
&stats_setting
--------------------------------------------------
l_stats = T
fname_prefix = lba
stats_fmt = netcdf
stats_tsamp = 60.0000000000000
stats_tout = 60.0000000000000
l_allow_small_stats_tout = F
Constant flags:
l_pos_def = F
l_gamma_Skw = T
l_byteswap_io = F
Constant tolerances [units]
rt_tol [kg/kg] = 1.000000000000000E-008
thl_tol [K] = 1.000000000000000E-002
w_tol [m/s] = 2.000000000000000E-002
Parameter Value
--------- -----
C1 = 1.00000000000000000000
C1b = 1.00000000000000000000
C1c = 1.00000000000000000000
C2rt = 2.00000000000000000000
C2thl = 2.00000000000000000000
C2rtthl = 2.00000000000000000000
C4 = 2.00000000000000000000
C_uu_shr = 0.40000000000000002220
C_uu_buoy = 0.29999999999999998890
C6rt = 2.00000000000000000000
C6rtb = 2.00000000000000000000
C6rtc = 1.00000000000000000000
C6thl = 2.00000000000000000000
C6thlb = 2.00000000000000000000
C6thlc = 1.00000000000000000000
C7 = 0.50000000000000000000
C7b = 0.50000000000000000000
C7c = 0.50000000000000000000
C8 = 0.50000000000000000000
C8b = 0.02000000000000000042
C10 = 3.29999999999999982236
C11 = 0.40000000000000002220
C11b = 0.40000000000000002220
C11c = 0.50000000000000000000
C12 = 1.00000000000000000000
C13 = 0.10000000000000000555
C14 = 1.00000000000000000000
C_wp2_pr_dfsn = 0.00000000000000000000
C_wp3_pr_tp = 0.00000000000000000000
C_wp3_pr_turb = 1.00000000000000000000
C_wp3_pr_dfsn = 0.00000000000000000000
C_wp2_splat = 0.00000000000000000000
C6rt_Lscale0 = 14.00000000000000000000
C6thl_Lscale0 = 14.00000000000000000000
C7_Lscale0 = 0.84999999999999997780
wpxp_L_thresh = 60.00000000000000000000
c_K = 0.20000000000000001110
c_K1 = 0.20000000000000001110
nu1 = 20.00000000000000000000
c_K2 = 0.02500000000000000139
nu2 = 1.00000000000000000000
c_K6 = 0.37500000000000000000
nu6 = 5.00000000000000000000
c_K8 = 5.00000000000000000000
nu8 = 20.00000000000000000000
c_K9 = 0.10000000000000000555
nu9 = 10.00000000000000000000
nu10 = 0.00000000000000000000
c_K_hm = 0.75000000000000000000
c_K_hmb = 0.75000000000000000000
K_hm_min_coef = 0.10000000000000000555
nu_hm = 1.50000000000000000000
slope_coef_spread_DG_means_w = 21.00000000000000000000
pdf_component_stdev_factor_w = 1.00000000000000000000
coef_spread_DG_means_rt = 0.80000000000000004441
coef_spread_DG_means_thl = 0.80000000000000004441
gamma_coef = 0.25000000000000000000
gamma_coefb = 0.25000000000000000000
gamma_coefc = 5.00000000000000000000
mu = 0.00100000000000000002
beta = 1.00000000000000000000
lmin_coef = 0.50000000000000000000
omicron = 0.50000000000000000000
zeta_vrnce_rat = 0.00000000000000000000
upsilon_precip_frac_rat = 0.55000000000000004441
lambda0_stability_coef = 0.02999999999999999889
mult_coef = 0.50000000000000000000
taumin = 90.00000000000000000000
taumax = 3600.00000000000000000000
Lscale_mu_coef = 2.00000000000000000000
Lscale_pert_coef = 0.10000000000000000555
alpha_corr = 0.14999999999999999445
Skw_denom_coef = 4.00000000000000000000
c_K10 = 1.00000000000000000000
c_K10h = 1.00000000000000000000
thlp2_rad_coef = 1.00000000000000000000
thlp2_rad_cloud_frac_thresh = 0.10000000000000000555
up2_sfc_coef = 4.00000000000000000000
Skw_max_mag = 10.00000000000000000000
C_invrs_tau_bkgnd = 1.10000000000000008882
C_invrs_tau_sfc = 0.10000000000000000555
C_invrs_tau_shear = 0.14999999999999999445
C_invrs_tau_N2 = 0.40000000000000002220
C_invrs_tau_N2_wp2 = 0.20000000000000001110
C_invrs_tau_N2_xp2 = 0.05000000000000000278
C_invrs_tau_N2_wpxp = 0.00000000000000000000
C_invrs_tau_N2_clear_wp3 = 1.00000000000000000000
C_invrs_tau_wpxp_Ri = 0.34999999999999997780
C_invrs_tau_wpxp_N2_thresh = 0.00033000000000000000
xp3_coef_base = 0.25000000000000000000
xp3_coef_slope = 0.01000000000000000021
altitude_threshold = 100.00000000000000000000
rtp2_clip_coef = 0.50000000000000000000
Cx_min = 0.33000000000000001554
Cx_max = 0.94999999999999995559
Richardson_num_min = 0.25000000000000000000
Richardson_num_max = 400.00000000000000000000
a3_coef_min = 1.00000000000000000000
a_const = 1.80000000000000004441
bv_efold = 5.00000000000000000000
wpxp_Ri_exp = 0.50000000000000000000
z_displace = 25.00000000000000000000
--------------------------------------------------
µphysics_setting
--------------------------------------------------
microphys_scheme = morrison
l_cloud_sed = F
sigma_g = 1.50000000000000
l_graupel = T
l_hail = F
l_seifert_beheng = F
l_predict_Nc = F
l_const_Nc_in_cloud = T
specify_aerosol = morrison_lognormal
l_subgrid_w = T
l_arctic_nucl = F
l_cloud_edge_activation = F
l_fix_pgam = F
l_in_cloud_Nc_diff = T
l_var_covar_src = T
l_upwind_diff_sed = F
lh_microphys_type = interactive
lh_num_samples = 64
lh_sequence_length = 1
lh_seed = 5489
l_fix_w_chi_eta_correlations = T
l_silhs_KK_convergence_adj_mean = F
importance_prob_thresh = 1.000000000000000E-008
host_dx = 1000000.00000000
host_dy = 1000000.00000000
hmp2_ip_on_hmm2_ip_slope%rr = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%ri = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%rs = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%rg = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Nr = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Ni = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Ni = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Ng = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_intrcpt%rr = 5.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%ri = 1.25000000000000
hmp2_ip_on_hmm2_ip_intrcpt%rs = 1.25000000000000
hmp2_ip_on_hmm2_ip_intrcpt%rg = 1.25000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Nr = 2.50000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.625000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ni = 0.625000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ng = 0.625000000000000
Ncnp2_on_Ncnm2 = 3.000000000000000E-003
C_evap = 0.860000000000000
r_0 = 2.500000000000000E-005
microphys_start_time = 0.000000000000000E+000
Nc0_in_cloud = 100000000.000000
ccnconst = 120.000000000000
ccnexpnt = 0.400000005960464
aer_rm1 = 1.100000002196566E-008
aer_rm2 = 5.999999785899490E-008
aer_n1 = 125000000.000000
aer_n2 = 65000000.0000000
aer_sig1 = 1.20000004768372
aer_sig2 = 1.70000004768372
pgam_fixed = 5.00000000000000
precip_frac_calc_type = 2
--------------------------------------------------
&SILHS_setting
--------------------------------------------------
Correlation array (approximate); in cloud:
1.000 -0.600 0.090 0.090 0.558 0.544 0.212 0.207 0.212 0.207 0.212 0.207
-0.600 1.000 0.027 0.027 0.081 0.093 -0.026 0.087 0.019 0.012 0.000 0.000
0.090 0.027 1.000 0.340 0.223 0.217 0.106 0.156 0.000 0.000 0.000 0.000
0.090 0.027 0.340 1.000 0.000 0.000 0.464 0.320 0.168 0.232 0.000 0.000
0.558 0.081 0.223 0.000 1.000 0.728 0.000 0.000 0.116 0.114 0.226 0.223
0.544 0.093 0.217 0.000 0.728 1.000 0.113 0.111 0.000 0.000 0.222 0.219
0.212 -0.026 0.106 0.464 0.000 0.113 1.000 0.717 0.526 0.522 0.323 0.319
0.207 0.087 0.156 0.320 0.000 0.111 0.717 1.000 0.522 0.516 0.319 0.315
0.212 0.019 0.000 0.168 0.116 0.000 0.526 0.522 1.000 0.717 0.425 0.421
0.207 0.012 0.000 0.232 0.114 0.000 0.522 0.516 0.717 1.000 0.421 0.417
0.212 0.000 0.000 0.000 0.226 0.222 0.323 0.319 0.425 0.421 1.000 0.717
0.207 0.000 0.000 0.000 0.223 0.219 0.319 0.315 0.421 0.417 0.717 1.000
Correlation array (approximate); below cloud:
1.000 0.300 0.090 0.090 0.558 0.544 0.212 0.207 0.212 0.207 0.212 0.207
0.300 1.000 0.027 0.027 0.081 0.093 -0.026 0.087 0.019 0.012 0.000 0.000
0.090 0.027 1.000 0.340 0.223 0.217 0.106 0.156 0.000 0.000 0.000 0.000
0.090 0.027 0.340 1.000 0.000 0.000 0.464 0.320 0.168 0.232 0.000 0.000
0.558 0.081 0.223 0.000 1.000 0.728 0.000 0.000 0.116 0.114 0.226 0.223
0.544 0.093 0.217 0.000 0.728 1.000 0.113 0.111 0.000 0.000 0.222 0.219
0.212 -0.026 0.106 0.464 0.000 0.113 1.000 0.717 0.526 0.522 0.323 0.319
0.207 0.087 0.156 0.320 0.000 0.111 0.717 1.000 0.522 0.516 0.319 0.315
0.212 0.019 0.000 0.168 0.116 0.000 0.526 0.522 1.000 0.717 0.425 0.421
0.207 0.012 0.000 0.232 0.114 0.000 0.522 0.516 0.717 1.000 0.421 0.417
0.212 0.000 0.000 0.000 0.226 0.222 0.323 0.319 0.425 0.421 1.000 0.717
0.207 0.000 0.000 0.000 0.223 0.219 0.319 0.315 0.421 0.417 0.717 1.000
--------------------------------------------------
&radiation_setting
--------------------------------------------------
rad_scheme = lba
sol_const = 1367.00000000000
alvdr = 0.100000000000000
alvdf = 0.100000000000000
alndr = 0.100000000000000
alndf = 0.100000000000000
radiation_top = 50000.0000000000
F0 = 100.000000000000
F1 = 20.0000000000000
kappa = 119.000000000000
gc = 0.860000000000000
omega = 0.996500000000000
slr = 1.00000000000000
l_rad_above_cloud = F
l_sw_radiation = F
l_fix_cos_solar_zen = F
l_use_default_std_atmosphere = T
Fs_values = 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
cos_solar_zen_values = -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
cos_solar_zen_times = -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
eff_drop_radius = 1.000000000000000E-005
--------------------------------------------------
&configurable_clubb_flags_nl
--------------------------------------------------
iiPDF_type = 1
ipdf_call_placement = 2
penta_solve_method = 2
tridiag_solve_method = 2
grid_remap_method = 1
grid_adapt_in_time_method = 0
l_use_precip_frac = T
l_predict_upwp_vpwp = T
l_ho_nontrad_coriolis = F
l_ho_trad_coriolis = F
l_min_wp2_from_corr_wx = F
l_min_xp2_from_corr_wx = T
l_C2_cloud_frac = F
l_diffuse_rtm_and_thlm = F
l_stability_correct_Kh_N2_zm = F
l_calc_thlp2_rad = T
l_upwind_xpyp_ta = T
l_upwind_xm_ma = T
l_uv_nudge = T
l_rtm_nudge = F
l_tke_aniso = T
l_vert_avg_closure = F
l_trapezoidal_rule_zt = F
l_trapezoidal_rule_zm = F
l_call_pdf_closure_twice = F
l_standard_term_ta = F
l_partial_upwind_wp3 = F
l_godunov_upwind_wpxp_ta = F
l_godunov_upwind_xpyp_ta = F
l_use_cloud_cover = F
l_diagnose_correlations = F
l_calc_w_corr = F
l_const_Nc_in_cloud = T
l_fix_w_chi_eta_correlations = T
l_stability_correct_tau_zm = F
l_damp_wp2_using_em = T
l_do_expldiff_rtm_thlm = F
l_Lscale_plume_centered = F
l_diag_Lscale_from_tau = T
l_use_C7_Richardson = T
l_use_C11_Richardson = F
l_use_shear_Richardson = F
l_brunt_vaisala_freq_moist = F
l_use_thvm_in_bv_freq = F
l_rcm_supersat_adj = T
l_damp_wp3_Skw_squared = T
l_prescribed_avg_deltaz = F
l_lmm_stepping = F
l_e3sm_config = F
l_vary_convect_depth = F
l_use_tke_in_wp3_pr_turb_term = T
l_use_tke_in_wp2_wp3_K_dfsn = F
l_use_wp3_lim_with_smth_Heaviside = F
l_smooth_Heaviside_tau_wpxp = T
l_modify_limiters_for_cnvg_test = F
l_enable_relaxed_clipping = F
l_linearize_pbl_winds = F
l_mono_flux_lim_thlm = T
l_mono_flux_lim_rtm = T
l_mono_flux_lim_um = T
l_mono_flux_lim_vm = T
l_mono_flux_lim_spikefix = T
l_host_applies_sfc_fluxes = F
l_wp2_fill_holes_tke = T
l_add_dycore_grid = F
--------------------------------------------------
git diff src/
--------------------------------------------------
See *setup.txt file in output folder
Path to sounding: lba_sounding.in
File exists? T
Path to sclr_sounding: lba_sclr_sounding.in
File exists? T
Path to edsclr_sounding: lba_edsclr_sounding.in
File exists? T
Reading in sounding information
z = 0.000000000000000E+000 334.000000000000 443.000000000000
970.000000000000 1523.00000000000 2086.00000000000
2630.00000000000 3167.00000000000 3694.00000000000
4197.00000000000 4657.00000000000 5112.00000000000
5556.00000000000 6001.00000000000 6448.00000000000
6866.00000000000 7301.00000000000 7751.00000000000
8170.00000000000 8588.00000000000 9019.00000000000
9481.00000000000 9954.00000000000 10443.0000000000
10878.0000000000 11330.0000000000 11836.0000000000
12342.0000000000 12841.0000000000 13348.0000000000
13841.0000000000 14313.0000000000 14826.0000000000
15328.0000000000 15889.0000000000 16361.0000000000
16831.0000000000 17312.0000000000 17804.0000000000
18267.0000000000 18721.0000000000 19201.0000000000
19679.0000000000 20191.0000000000 20683.0000000000
21199.0000000000 29870.0000000000
u = 0.000000000000000E+000 0.810000000000000 1.17000000000000
3.44000000000000 3.53000000000000 3.88000000000000
4.09000000000000 3.97000000000000 1.22000000000000
0.160000000000000 -1.22000000000000 -1.72000000000000
-2.77000000000000 -2.65000000000000 -0.640000000000000
-7.000000000000001E-002 -1.90000000000000 -2.70000000000000
-2.99000000000000 -3.66000000000000 -5.05000000000000
-6.64000000000000 -4.74000000000000 -5.30000000000000
-6.07000000000000 -4.26000000000000 -7.52000000000000
-8.88000000000000 -9.00000000000000 -7.77000000000000
-5.37000000000000 -3.88000000000000 -1.15000000000000
-2.36000000000000 -9.20000000000000 -8.01000000000000
-5.68000000000000 -8.83000000000000 -14.5100000000000
-15.5500000000000 -15.3600000000000 -17.6700000000000
-17.8200000000000 -18.9400000000000 -15.9200000000000
-15.3200000000000 -15.3200000000000
v = -0.400000000000000 -3.51000000000000 -3.88000000000000
-4.77000000000000 -5.28000000000000 -5.85000000000000
-5.60000000000000 -2.67000000000000 -1.47000000000000
0.570000000000000 0.890000000000000 -8.000000000000000E-002
1.11000000000000 2.15000000000000 3.12000000000000
3.22000000000000 3.34000000000000 1.91000000000000
1.15000000000000 1.01000000000000 -0.570000000000000
-0.670000000000000 0.310000000000000 2.97000000000000
2.32000000000000 2.66000000000000 4.79000000000000
3.40000000000000 3.14000000000000 3.93000000000000
7.57000000000000 2.58000000000000 2.50000000000000
6.44000000000000 6.84000000000000 0.190000000000000
-2.20000000000000 -3.60000000000000 0.560000000000000
6.68000000000000 9.41000000000000 7.03000000000000
5.32000000000000 1.14000000000000 -0.650000000000000
5.27000000000000 5.27000000000000
ug = 0.000000000000000E+000 0.810000000000000 1.17000000000000
3.44000000000000 3.53000000000000 3.88000000000000
4.09000000000000 3.97000000000000 1.22000000000000
0.160000000000000 -1.22000000000000 -1.72000000000000
-2.77000000000000 -2.65000000000000 -0.640000000000000
-7.000000000000001E-002 -1.90000000000000 -2.70000000000000
-2.99000000000000 -3.66000000000000 -5.05000000000000
-6.64000000000000 -4.74000000000000 -5.30000000000000
-6.07000000000000 -4.26000000000000 -7.52000000000000
-8.88000000000000 -9.00000000000000 -7.77000000000000
-5.37000000000000 -3.88000000000000 -1.15000000000000
-2.36000000000000 -9.20000000000000 -8.01000000000000
-5.68000000000000 -8.83000000000000 -14.5100000000000
-15.5500000000000 -15.3600000000000 -17.6700000000000
-17.8200000000000 -18.9400000000000 -15.9200000000000
-15.3200000000000 -15.3200000000000
vg = -0.400000000000000 -3.51000000000000 -3.88000000000000
-4.77000000000000 -5.28000000000000 -5.85000000000000
-5.60000000000000 -2.67000000000000 -1.47000000000000
0.570000000000000 0.890000000000000 -8.000000000000000E-002
1.11000000000000 2.15000000000000 3.12000000000000
3.22000000000000 3.34000000000000 1.91000000000000
1.15000000000000 1.01000000000000 -0.570000000000000
-0.670000000000000 0.310000000000000 2.97000000000000
2.32000000000000 2.66000000000000 4.79000000000000
3.40000000000000 3.14000000000000 3.93000000000000
7.57000000000000 2.58000000000000 2.50000000000000
6.44000000000000 6.84000000000000 0.190000000000000
-2.20000000000000 -3.60000000000000 0.560000000000000
6.68000000000000 9.41000000000000 7.03000000000000
5.32000000000000 1.14000000000000 -0.650000000000000
5.27000000000000 5.27000000000000
theta = 297.592000000000 300.447000000000
300.812000000000 303.273000000000 305.762000000000
308.496000000000 311.050000000000 313.698000000000
316.168000000000 318.237000000000 319.946000000000
322.368000000000 324.857000000000 327.649000000000
329.324000000000 331.571000000000 333.143000000000
334.176000000000 336.240000000000 337.845000000000
339.449000000000 341.275000000000 342.530000000000
343.516000000000 344.582000000000 345.528000000000
346.983000000000 347.526000000000 348.009000000000
348.895000000000 350.070000000000 352.771000000000
355.133000000000 358.799000000000 362.727000000000
371.469000000000 381.779000000000 388.362000000000
398.647000000000 414.153000000000 431.469000000000
442.277000000000 457.142000000000 472.585000000000
487.986000000000 505.775000000000 762.321000000000
rt = 1.856700000000000E-002 1.647000000000000E-002 1.643700000000000E-002
1.459300000000000E-002 1.275600000000000E-002 1.094000000000000E-002
9.117100000000000E-003 8.558600000000000E-003 7.456000000000000E-003
6.715000000000000E-003 6.056700000000000E-003 5.246200000000000E-003
4.330700000000000E-003 3.529900000000000E-003 3.076200000000000E-003
2.219600000000000E-003 2.002600000000000E-003 1.591500000000000E-003
9.664000000000000E-004 8.271600000000000E-004 6.214600000000000E-004
4.228200000000000E-004 2.932400000000000E-004 2.247100000000000E-004
2.076300000000000E-004 1.246600000000000E-004 7.938700000000000E-005
5.108600000000000E-005 3.348700000000000E-005 1.811900000000000E-005
9.696499999999999E-006 5.843000000000000E-006 3.242500000000000E-006
1.874200000000000E-006 1.088200000000000E-006 1.137500000000000E-006
1.304600000000000E-006 1.004300000000000E-006 1.035700000000000E-006
1.746900000000000E-006 3.030800000000000E-006 2.670500000000000E-006
3.108200000000000E-006 3.286900000000000E-006 3.317900000000000E-006
3.423000000000000E-006 1.439000000000000E-005
p_in_Pa = -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
subs = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
stats init: error reading registry
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
FATAL ERROR in stats_init_api
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in prescribe_forcings:
CLUBB-TIMER time_loop_init = 0.0000
CLUBB-TIMER time_clubb_advance = 0.0000
CLUBB-TIMER time_clubb_pdf = 0.0000
CLUBB-TIMER time_SILHS = 0.0000
CLUBB-TIMER time_microphys_scheme = 0.0000
CLUBB-TIMER time_microphys_advance = 0.0000
CLUBB-TIMER time_loop_end = 0.0000
CLUBB-TIMER time_adapt_grid = 0.0000
CLUBB-TIMER time_total = 0.0005
Fatal error in clubb, check your parameter values and timestep
COMPLETE -- clex9_oct14
COMPLETE -- gabls2
COMPLETE -- dycoms2_rf02_do
COMPLETE -- dycoms2_rf02_ds
ERROR -- nov11_altocu
Duplicating params
- Initial values file: '/home/jenkins/workspace/clubb_driver_test/run_scripts/../input/tunable_parameters/tunable_parameters.in'
- Duplicating '4' times.
Writing to '/home/jenkins/workspace/clubb_driver_test/tmp_dup_params.in':
- ngrdcol = 4
- using executable: /home/jenkins/workspace/clubb_driver_test/run_scripts/../install/latest/clubb_standalone
=================== Running nov11_altocu ===================
2026/03/16 03:55:05
--------------------------------------------------
Latest git log entry
--------------------------------------------------
A detailed git diff can be found at the end of this file
--------------------------------------------------
Tunable Parameters:
--------------------------------------------------
--------------------------------------------------
Preprocessing Directives:
--------------------------------------------------
-DNETCDF enabled
-DCOAMPS_MICRO enabled
-DTUNER disabled
-DSILHS enabled
-Dnooverlap enabled
-Draoffline enabled
-DUSE_BUGSrad_ocast_random disabled
-DBYTESWAP_IO disabled
--------------------------------------------------
&model_setting
--------------------------------------------------
runtype = nov11_altocu
nzmax = 176
grid_type = 1
deltaz = 25.0000000000000 25.0000000000000
25.0000000000000 25.0000000000000
zm_init = 3000.00000000000 3000.00000000000
3000.00000000000 3000.00000000000
zm_top = 7541.00000000000 7541.00000000000
7541.00000000000 7541.00000000000
zt_grid_fname =
zm_grid_fname =
day = 11
month = 11
year = 1999
lat_vals = 47.2500000000000
lon_vals = -112.000000000000
sfc_elevation = 0.000000000000000E+000
time_initial = 61200.0000000000
time_final = 82800.0000000000
dt_main = 60.0000000000000
dt_rad = 60.0000000000000
sfctype = 0
T_sfc = 288.000000000000 288.000000000000
288.000000000000 288.000000000000
p_sfc = 69512.0000000000 69512.0000000000
69512.0000000000 69512.0000000000
sens_ht = 0.000000000000000E+000
latent_ht = 0.000000000000000E+000
fcor = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000
fcor_y = 9.899630071699246E-005 9.899630071699246E-005
9.899630071699246E-005 9.899630071699246E-005
T0 = 300.000000000000
ts_nudge = 86400.0000000000
forcings_file_path =
l_t_dependent = T
l_ignore_forcings = F
l_modify_ic_with_cubic_int = F
l_modify_bc_for_cnvg_test = F
l_input_xpwp_sfc = F
saturation_formula = 3
thlm_sponge_damp_settings%l_sponge_damping = F
rtm_sponge_damp_settings%l_sponge_damping = F
uv_sponge_damp_settings%l_sponge_damping = F
wp2_sponge_damp_settings%l_sponge_damping = F
wp3_sponge_damp_settings%l_sponge_damping = F
up2_vp2_sponge_damp_settings%l_sponge_damping = F
thlm_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
thlm_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
thlm_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
rtm_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
rtm_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
rtm_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
uv_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
uv_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
uv_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
wp2_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
wp2_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
wp2_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
wp3_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
wp3_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
wp3_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
up2_vp2_sponge_damp_settings%tau_sponge_damp_min = 60.0000000000000
up2_vp2_sponge_damp_settings%tau_sponge_damp_max = 1800.00000000000
up2_vp2_sponge_damp_settings%sponge_damp_depth = 0.250000000000000
l_soil_veg = F
l_restart = F
l_input_fields = F
restart_path_case = restart/nov11_altocu
time_restart = 0.000000000000000E+000
debug_level = 2
sclr_dim = 0
edsclr_dim = 0
iisclr_thl = -2
iisclr_rt = -1
iisclr_CO2 = -1
sclr_tol =
--------------------------------------------------
&stats_setting
--------------------------------------------------
l_stats = T
fname_prefix = nov11_altocu
stats_fmt = netcdf
stats_tsamp = 60.0000000000000
stats_tout = 60.0000000000000
l_allow_small_stats_tout = F
Constant flags:
l_pos_def = F
l_gamma_Skw = T
l_byteswap_io = F
Constant tolerances [units]
rt_tol [kg/kg] = 1.000000000000000E-008
thl_tol [K] = 1.000000000000000E-002
w_tol [m/s] = 2.000000000000000E-002
Parameter Value
--------- -----
C1 = 1.00000000000000000000
C1b = 1.00000000000000000000
C1c = 1.00000000000000000000
C2rt = 2.00000000000000000000
C2thl = 2.00000000000000000000
C2rtthl = 2.00000000000000000000
C4 = 2.00000000000000000000
C_uu_shr = 0.40000000000000002220
C_uu_buoy = 0.29999999999999998890
C6rt = 2.00000000000000000000
C6rtb = 2.00000000000000000000
C6rtc = 1.00000000000000000000
C6thl = 2.00000000000000000000
C6thlb = 2.00000000000000000000
C6thlc = 1.00000000000000000000
C7 = 0.50000000000000000000
C7b = 0.50000000000000000000
C7c = 0.50000000000000000000
C8 = 0.50000000000000000000
C8b = 0.02000000000000000042
C10 = 3.29999999999999982236
C11 = 0.40000000000000002220
C11b = 0.40000000000000002220
C11c = 0.50000000000000000000
C12 = 1.00000000000000000000
C13 = 0.10000000000000000555
C14 = 1.00000000000000000000
C_wp2_pr_dfsn = 0.00000000000000000000
C_wp3_pr_tp = 0.00000000000000000000
C_wp3_pr_turb = 1.00000000000000000000
C_wp3_pr_dfsn = 0.00000000000000000000
C_wp2_splat = 0.00000000000000000000
C6rt_Lscale0 = 14.00000000000000000000
C6thl_Lscale0 = 14.00000000000000000000
C7_Lscale0 = 0.84999999999999997780
wpxp_L_thresh = 60.00000000000000000000
c_K = 0.20000000000000001110
c_K1 = 0.20000000000000001110
nu1 = 20.00000000000000000000
c_K2 = 0.02500000000000000139
nu2 = 1.00000000000000000000
c_K6 = 0.37500000000000000000
nu6 = 5.00000000000000000000
c_K8 = 5.00000000000000000000
nu8 = 20.00000000000000000000
c_K9 = 0.10000000000000000555
nu9 = 10.00000000000000000000
nu10 = 0.00000000000000000000
c_K_hm = 0.75000000000000000000
c_K_hmb = 0.75000000000000000000
K_hm_min_coef = 0.10000000000000000555
nu_hm = 1.50000000000000000000
slope_coef_spread_DG_means_w = 21.00000000000000000000
pdf_component_stdev_factor_w = 1.00000000000000000000
coef_spread_DG_means_rt = 0.80000000000000004441
coef_spread_DG_means_thl = 0.80000000000000004441
gamma_coef = 0.25000000000000000000
gamma_coefb = 0.25000000000000000000
gamma_coefc = 5.00000000000000000000
mu = 0.00100000000000000002
beta = 1.00000000000000000000
lmin_coef = 0.50000000000000000000
omicron = 0.50000000000000000000
zeta_vrnce_rat = 0.00000000000000000000
upsilon_precip_frac_rat = 0.55000000000000004441
lambda0_stability_coef = 0.02999999999999999889
mult_coef = 0.50000000000000000000
taumin = 90.00000000000000000000
taumax = 3600.00000000000000000000
Lscale_mu_coef = 2.00000000000000000000
Lscale_pert_coef = 0.10000000000000000555
alpha_corr = 0.14999999999999999445
Skw_denom_coef = 4.00000000000000000000
c_K10 = 1.00000000000000000000
c_K10h = 1.00000000000000000000
thlp2_rad_coef = 1.00000000000000000000
thlp2_rad_cloud_frac_thresh = 0.10000000000000000555
up2_sfc_coef = 4.00000000000000000000
Skw_max_mag = 10.00000000000000000000
C_invrs_tau_bkgnd = 1.10000000000000008882
C_invrs_tau_sfc = 0.10000000000000000555
C_invrs_tau_shear = 0.14999999999999999445
C_invrs_tau_N2 = 0.40000000000000002220
C_invrs_tau_N2_wp2 = 0.20000000000000001110
C_invrs_tau_N2_xp2 = 0.05000000000000000278
C_invrs_tau_N2_wpxp = 0.00000000000000000000
C_invrs_tau_N2_clear_wp3 = 1.00000000000000000000
C_invrs_tau_wpxp_Ri = 0.34999999999999997780
C_invrs_tau_wpxp_N2_thresh = 0.00033000000000000000
xp3_coef_base = 0.25000000000000000000
xp3_coef_slope = 0.01000000000000000021
altitude_threshold = 100.00000000000000000000
rtp2_clip_coef = 0.50000000000000000000
Cx_min = 0.33000000000000001554
Cx_max = 0.94999999999999995559
Richardson_num_min = 0.25000000000000000000
Richardson_num_max = 400.00000000000000000000
a3_coef_min = 1.00000000000000000000
a_const = 1.80000000000000004441
bv_efold = 5.00000000000000000000
wpxp_Ri_exp = 0.50000000000000000000
z_displace = 25.00000000000000000000
--------------------------------------------------
µphysics_setting
--------------------------------------------------
microphys_scheme = morrison
l_cloud_sed = F
sigma_g = 1.50000000000000
l_graupel = F
l_hail = F
l_seifert_beheng = F
l_predict_Nc = F
l_const_Nc_in_cloud = F
specify_aerosol = morrison_lognormal
l_subgrid_w = T
l_arctic_nucl = F
l_cloud_edge_activation = F
l_fix_pgam = F
l_in_cloud_Nc_diff = T
l_var_covar_src = F
l_upwind_diff_sed = F
lh_microphys_type = disabled
lh_num_samples = 2
lh_sequence_length = 1
lh_seed = 5489
l_fix_w_chi_eta_correlations = T
l_silhs_KK_convergence_adj_mean = F
importance_prob_thresh = 1.000000000000000E-008
host_dx = 1000000.00000000
host_dy = 1000000.00000000
hmp2_ip_on_hmm2_ip_slope%rr = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%ri = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%rs = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%rg = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Nr = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Ni = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Ni = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_slope%Ng = 0.000000000000000E+000
hmp2_ip_on_hmm2_ip_intrcpt%rr = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%ri = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%rs = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%rg = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Nr = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ni = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ni = 1.00000000000000
hmp2_ip_on_hmm2_ip_intrcpt%Ng = 1.00000000000000
Ncnp2_on_Ncnm2 = 1.00000000000000
C_evap = 0.860000000000000
r_0 = 2.500000000000000E-005
microphys_start_time = 64800.0000000000
Nc0_in_cloud = 100000000.000000
ccnconst = 120.000000000000
ccnexpnt = 0.400000005960464
aer_rm1 = 1.100000002196566E-008
aer_rm2 = 5.999999785899490E-008
aer_n1 = 125000000.000000
aer_n2 = 65000000.0000000
aer_sig1 = 1.20000004768372
aer_sig2 = 1.70000004768372
pgam_fixed = 5.00000000000000
precip_frac_calc_type = 2
--------------------------------------------------
&SILHS_setting
--------------------------------------------------
Warning: missing correlation input file(s): ../input/case_setups/nov11_altocu_c
orr_array_cloud.in and/or ../input/case_setups/nov11_altocu_corr_array_below.in
The default correlation arrays will be used.
Correlation array (approximate); in cloud:
1.000 -0.600 0.090 0.075 0.710 0.608 0.216 0.200 0.216 0.200
-0.600 1.000 0.027 0.022 0.103 0.104 -0.026 0.084 0.020 0.012
0.090 0.027 1.000 0.283 0.284 0.243 0.108 0.150 0.000 0.000
0.075 0.022 0.283 1.000 0.000 0.000 0.394 0.261 0.132 0.185
0.710 0.103 0.284 0.000 1.000 0.790 0.000 0.000 0.145 0.138
0.608 0.104 0.243 0.000 0.790 1.000 0.127 0.119 0.000 0.000
0.216 -0.026 0.108 0.394 0.000 0.127 1.000 0.720 0.535 0.521
0.200 0.084 0.150 0.261 0.000 0.119 0.720 1.000 0.521 0.500
0.216 0.020 0.000 0.132 0.145 0.000 0.535 0.521 1.000 0.720
0.200 0.012 0.000 0.185 0.138 0.000 0.521 0.500 0.720 1.000
Correlation array (approximate); below cloud:
1.000 0.300 0.090 0.075 0.710 0.608 0.216 0.200 0.216 0.200
0.300 1.000 0.027 0.022 0.103 0.104 -0.026 0.084 0.020 0.012
0.090 0.027 1.000 0.283 0.284 0.243 0.108 0.150 0.000 0.000
0.075 0.022 0.283 1.000 0.000 0.000 0.394 0.261 0.132 0.185
0.710 0.103 0.284 0.000 1.000 0.790 0.000 0.000 0.145 0.138
0.608 0.104 0.243 0.000 0.790 1.000 0.127 0.119 0.000 0.000
0.216 -0.026 0.108 0.394 0.000 0.127 1.000 0.720 0.535 0.521
0.200 0.084 0.150 0.261 0.000 0.119 0.720 1.000 0.521 0.500
0.216 0.020 0.000 0.132 0.145 0.000 0.535 0.521 1.000 0.720
0.200 0.012 0.000 0.185 0.138 0.000 0.521 0.500 0.720 1.000
--------------------------------------------------
&radiation_setting
--------------------------------------------------
rad_scheme = simplified
sol_const = 1367.00000000000
alvdr = 0.100000000000000
alvdf = 0.100000000000000
alndr = 0.100000000000000
alndf = 0.100000000000000
radiation_top = 50000.0000000000
F0 = 104.000000000000
F1 = 62.0000000000000
kappa = 94.2000000000000
gc = 0.860000000000000
omega = 0.996500000000000
slr = 1.00000000000000
l_rad_above_cloud = F
l_sw_radiation = T
l_fix_cos_solar_zen = T
l_use_default_std_atmosphere = T
Fs_values = 1212.75000000000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
cos_solar_zen_values = 0.432900000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
cos_solar_zen_times = -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
-999.000000000000 -999.000000000000 -999.000000000000
eff_drop_radius = 1.000000000000000E-005
--------------------------------------------------
&configurable_clubb_flags_nl
--------------------------------------------------
iiPDF_type = 1
ipdf_call_placement = 2
penta_solve_method = 2
tridiag_solve_method = 2
grid_remap_method = 1
grid_adapt_in_time_method = 0
l_use_precip_frac = T
l_predict_upwp_vpwp = T
l_ho_nontrad_coriolis = F
l_ho_trad_coriolis = F
l_min_wp2_from_corr_wx = F
l_min_xp2_from_corr_wx = T
l_C2_cloud_frac = F
l_diffuse_rtm_and_thlm = F
l_stability_correct_Kh_N2_zm = F
l_calc_thlp2_rad = T
l_upwind_xpyp_ta = T
l_upwind_xm_ma = T
l_uv_nudge = F
l_rtm_nudge = F
l_tke_aniso = T
l_vert_avg_closure = F
l_trapezoidal_rule_zt = F
l_trapezoidal_rule_zm = F
l_call_pdf_closure_twice = F
l_standard_term_ta = F
l_partial_upwind_wp3 = F
l_godunov_upwind_wpxp_ta = F
l_godunov_upwind_xpyp_ta = F
l_use_cloud_cover = F
l_diagnose_correlations = F
l_calc_w_corr = F
l_const_Nc_in_cloud = F
l_fix_w_chi_eta_correlations = T
l_stability_correct_tau_zm = F
l_damp_wp2_using_em = T
l_do_expldiff_rtm_thlm = F
l_Lscale_plume_centered = F
l_diag_Lscale_from_tau = T
l_use_C7_Richardson = T
l_use_C11_Richardson = F
l_use_shear_Richardson = F
l_brunt_vaisala_freq_moist = F
l_use_thvm_in_bv_freq = F
l_rcm_supersat_adj = T
l_damp_wp3_Skw_squared = T
l_prescribed_avg_deltaz = F
l_lmm_stepping = F
l_e3sm_config = F
l_vary_convect_depth = F
l_use_tke_in_wp3_pr_turb_term = T
l_use_tke_in_wp2_wp3_K_dfsn = F
l_use_wp3_lim_with_smth_Heaviside = F
l_smooth_Heaviside_tau_wpxp = T
l_modify_limiters_for_cnvg_test = F
l_enable_relaxed_clipping = F
l_linearize_pbl_winds = F
l_mono_flux_lim_thlm = T
l_mono_flux_lim_rtm = T
l_mono_flux_lim_um = T
l_mono_flux_lim_vm = T
l_mono_flux_lim_spikefix = T
l_host_applies_sfc_fluxes = F
l_wp2_fill_holes_tke = T
l_add_dycore_grid = F
--------------------------------------------------
git diff src/
--------------------------------------------------
See *setup.txt file in output folder
Path to sounding: nov11_altocu_sounding.in
File exists? T
Path to sclr_sounding: nov11_altocu_sclr_sounding.in
File exists? T
Path to edsclr_sounding: nov11_altocu_edsclr_sounding.in
File exists? T
Reading in sounding information
z = 3000.00000000000 4112.70000000000 4963.70000000000
5535.70000000000 5555.70000000000 7541.70000000000
u = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
v = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
ug = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
vg = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
theta = 303.830000000000 309.150000000000
311.500000000000 312.100000000000 314.000000000000
324.660000000000
rt = 4.250000000000000E-003 3.200000000000000E-003 2.700000000000000E-003
2.530000000000000E-003 2.250000000000000E-003 5.500000000000000E-004
p_in_Pa = -999.900000000000 -999.900000000000
-999.900000000000 -999.900000000000 -999.900000000000
-999.900000000000
subs = 0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
stats init: error reading registry
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
FATAL ERROR in stats_init_api
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not av
ailable. Latitude/Longitude for column 1: 15.00/-56.50
Latitude range from -90
to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in prescribe_forcings:
CLUBB-TIMER time_loop_init = 0.0000
CLUBB-TIMER time_clubb_advance = 0.0000
CLUBB-TIMER time_clubb_pdf = 0.0000
CLUBB-TIMER time_SILHS = 0.0000
CLUBB-TIMER time_microphys_scheme = 0.0000
CLUBB-TIMER time_microphys_advance = 0.0000
CLUBB-TIMER time_loop_end = 0.0000
CLUBB-TIMER time_adapt_grid = 0.0000
CLUBB-TIMER time_total = 0.0010
Fatal error in clubb, check your parameter values and timestep
COMPLETE -- jun25_altocu
COMPLETE -- mpace_b
COMPLETE -- mpace_a
COMPLETE -- mc3e
COMPLETE -- mpace_b_silhs
COMPLETE -- wangara
COMPLETE -- rico
COMPLETE -- rico_silhs
COMPLETE -- gabls3
COMPLETE -- twp_ice
=================== Runs Complete ===================
dycoms2_rf01_fixed_sst failure
lba failure
nov11_altocu failure
