Console Output
+ source /etc/profile.d/larson-group.sh
++ export PATH MANPATH LD_LIBRARY_PATH
++ export SVNROOT=http://carson.math.uwm.edu/repos
++ SVNROOT=http://carson.math.uwm.edu/repos
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju
++ LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju
++ source /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib'
++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib'
++ export GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ export GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ export GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib'
++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib'
++ export IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ export IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ export IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ '[' -e /opt/intel/oneapi/setvars.sh ']'
+++ echo /opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
+++ sed s:/opt/intel/oneapi/intelpython/latest/bin::g
++ export PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
++ PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib'
++ LD_LIBRARY_PATH='$LD_LIBRARY_PATH:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/opt/intel/oneapi/mkl/latest/lib/intel64:/usr/local/lib:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/usr/local/NETCDF-C-4.8.0-pgi/lib'
+++ uname -s
+++ uname -m
++ export NVARCH=Linux_x86_64
++ NVARCH=Linux_x86_64
++ export NVCOMPILERS=/opt/nvidia/hpc_sdk
++ NVCOMPILERS=/opt/nvidia/hpc_sdk
++ export 'MANPATH=$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man'
++ MANPATH='$MANPATH:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/$NVARCH/21.3/compilers/man:/opt/oracle/developerstudio12.6/man:$NVCOMPILERS/Linux_x86_64/21.3/compilers/man:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man'
++ export CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
++ CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
++ export PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ export PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ export PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ export PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ PATH=/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ export PATH=/usr/lib/cuda/bin:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ PATH=/usr/lib/cuda/bin:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/opt/rh/devtoolset-10/root/bin:/opt/oracle/developerstudio12.6/bin:/opt/open64/bin:/opt/Canopy:/usr/local/ncl-5.2.1/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin:/opt/intel/oneapi/compiler/2023.2.1/linux/bin/intel64:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ export GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ export GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ export GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ export INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ export INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ export INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ export NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ export NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ export NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1-gtcnmvu,
hdf5/1.14.3-42x3zrv, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ run_scripts/run_clubb_conv_test.bash
Creating initial bomex 90-min run... Done!
Restarting bomex with time step 1 seconds... Done!
Restarting bomex with time step 2 seconds... Done!
Restarting bomex with time step 4 seconds... Done!
Restarting bomex with time step 8 seconds... Done!
Restarting bomex with time step 16 seconds... Done!
Restarting bomex with time step 30 seconds... Done!
Restarting bomex with time step 60 seconds... Done!
Restarting bomex with time step 120 seconds... Done!
Restarting bomex with time step 240 seconds... Done!
Generating plot...
slope = 0.599979925303422
CLUBB converged!
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