Changes

#217 (Apr 23, 2025, 4:10:24 PM)

1. Update subcol_SILHS.F90 — noreply / githubweb

#216 (Apr 23, 2025, 3:04:56 PM)

1. Update subcol_SILHS.F90 — noreply / githubweb

#215 (Apr 23, 2025, 2:32:22 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#214 (Apr 23, 2025, 2:18:34 PM)

1. I updated adj_low_res_nu for use with a generalized grid. It is — bmg2 / githubweb
2. Err code struct (#1238) — noreply / githubweb
3. Err code struct (#1238) — noreply / githubweb

#212 (Mar 26, 2025, 12:47:06 PM)

1. Update run_scam.bash — noreply / githubweb

#211 (Mar 25, 2025, 4:54:13 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#210 (Mar 25, 2025, 4:45:54 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#209 (Mar 25, 2025, 4:37:43 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#208 (Mar 25, 2025, 4:36:45 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#207 (Mar 25, 2025, 4:25:55 PM)

1. Update clubb_intr.F90 — noreply / githubweb
2. Update clubb_intr.F90 — noreply / githubweb

#206 (Mar 25, 2025, 4:11:59 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#205 (Mar 25, 2025, 3:49:16 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#204 (Mar 25, 2025, 3:35:22 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#203 (Mar 25, 2025, 12:36:00 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#202 (Mar 25, 2025, 12:25:36 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#201 (Mar 25, 2025, 10:54:18 AM)

1. Update clubb_intr.F90 — noreply / githubweb

#200 (Mar 13, 2025, 4:16:22 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#199 (Mar 13, 2025, 3:50:36 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#198 (Mar 13, 2025, 3:37:11 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#197 (Mar 13, 2025, 3:22:51 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#195 (Mar 13, 2025, 3:04:06 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#194 (Mar 13, 2025, 10:51:15 AM)

1. Update clubb_intr.F90 — noreply / githubweb

#193 (Mar 13, 2025, 10:26:07 AM)

1. Update clubb_intr.F90 — noreply / githubweb

#192 (Mar 13, 2025, 10:04:58 AM)

1. Update clubb_intr.F90 — noreply / githubweb
2. Update clubb_intr.F90 — noreply / githubweb

#191 (Mar 13, 2025, 9:46:51 AM)

1. Update clubb_intr.F90 — noreply / githubweb

#190 (Mar 13, 2025, 9:22:37 AM)

1. Update clubb_intr.F90 — noreply / githubweb

#189 (Mar 12, 2025, 4:47:55 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#181 (Feb 20, 2025, 6:09:38 PM)

1. Trying comp error now — Gunther Huebler / githubweb

#179 (Feb 19, 2025, 11:32:45 AM)

1. fix namelist — noreply / githubweb

#178 (Feb 19, 2025, 11:21:46 AM)

1. remove ifdefs — noreply / githubweb

#177 (Feb 19, 2025, 11:10:38 AM)

1. add missing dummy variable — noreply / githubweb

#175 (Feb 19, 2025, 10:01:02 AM)

1. add back again to namelist — noreply / githubweb
2. change order in namelist and add valid values — noreply / githubweb

#174 (Feb 18, 2025, 9:37:20 PM)

1. remove from namelist — noreply / githubweb

#173 (Feb 18, 2025, 9:13:03 PM)

1. add unset_i — noreply / githubweb
2. add new logical flag for dycore and renamed flags for dycore and grid adaptation — noreply / githubweb
3. added new CLUBB files — 0-freundlich-adenin / githubweb

#169 (Feb 17, 2025, 4:08:43 PM)

1. fix naming — noreply / githubweb

#168 (Feb 17, 2025, 3:52:32 PM)

1. add unset_i — noreply / githubweb

#166 (Feb 17, 2025, 3:29:11 PM)

1. delete grid_adaptation module — noreply / githubweb

#165 (Feb 17, 2025, 2:50:28 PM)

1. added new CLUBB files — 0-freundlich-adenin / githubweb

#159 (Oct 8, 2024, 11:34:23 AM)

1. New/new_hybrid PDF Stats Removal (#1185) — noreply / githubweb
2. Copyout Nuke (#1182) — noreply / githubweb
3. Jenkins GPU fix (#181) — noreply / githubweb
4. Ri zm calc cleanup (#1186) — noreply / githubweb
5. Adding stack size change to jenkins files, this might fix the bin_diff tests. — Gunther Huebler / githubweb
6. Monoflux test (#1188) — noreply / githubweb
7. Fixing bug. This loop has a vertical dependency prevent the use of collapse(2). See https://github.com/larson-group/cam/issues/175\#issuecomment-2261283301 — Gunther Huebler / githubweb
8. refactoring to remove compiler warnings (#1187) — noreply / githubweb
9. refactoring to remove compiler warnings (#1187) — noreply / githubweb
10. remove unused dummy arguments (#182) — noreply / githubweb
11. I am copying the round-off level changes made to grid weights — bmg2 / githubweb
12. Mono Flux Optimizations  (#1189) — noreply / githubweb

#153 (Oct 7, 2024, 5:23:55 PM)

1. add new changes — 0-freundlich-adenin / githubweb

#152 (Oct 7, 2024, 10:52:35 AM)

1. update changes from clubb — 0-freundlich-adenin / githubweb

#151 (Oct 4, 2024, 4:05:41 PM)

1. add Lscale to advance_clubb_core_api call — 0-freundlich-adenin / githubweb

#149 (Oct 3, 2024, 2:59:11 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#148 (Oct 3, 2024, 2:49:09 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#147 (Oct 3, 2024, 2:36:43 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#146 (Oct 3, 2024, 2:18:03 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#145 (Oct 3, 2024, 1:56:24 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#144 (Oct 3, 2024, 1:30:09 PM)

1. Update clubb_intr.F90 — noreply / githubweb

#142 (Oct 3, 2024, 11:41:28 AM)

1. New/new_hybrid PDF Stats Removal (#1185) — noreply / githubweb
2. Copyout Nuke (#1182) — noreply / githubweb
3. Jenkins GPU fix (#181) — noreply / githubweb

#137 (Oct 2, 2024, 4:29:26 PM)

1. Possible fix — Gunther Huebler / githubweb

#133 (Oct 2, 2024, 3:04:18 PM)

1. update changes from feature branch — 0-freundlich-adenin / githubweb

#130 (Oct 1, 2024, 3:23:54 PM)

1. Remove unused code in configure and build-namelist — elundgren / githubweb
2. Use shr_kind_cl in GEOS-Chem character declarations; remove SPMD cpp defs — elundgren / githubweb
3. refactor set_wavenumber_bands — eaton / githubweb
4. Update ChangeLog — gdicker / githubweb
5. refactor rrtmgp_set_state — eaton / githubweb
6. Always use ONLY keyword in USE statements — elundgren / githubweb
7. refactor modified_cloud_fraction — eaton / githubweb
8. Update src/dynamics/se/dycore/control_mod.F90 — noreply / githubweb
9. bug fix - pmid_day arg should not have levels reversed — eaton / githubweb
10. rename optional arg compare_uppercase; use spmd_utils and mpi_bcast — elundgren / githubweb
11. refactor and bug fix in rad_gas_get_vmr — eaton / githubweb
12. Change modal aerosol species name retrieval method — elundgren / githubweb
13. code changes from code review — pel / githubweb
14. refactor rrtmgp_set_aer_sw — eaton / githubweb
15. Add comment and wallclock time to new CARMA tests — fvitt / githubweb
16. Update src/physics/cam/vertical_diffusion.F90 — noreply / githubweb
17. fix namelist definition — pel / githubweb
18. updates to include spun up waccm IC file and allow default value of se_nsplit — john / githubweb
19. ChangeLog update — john / githubweb
20. refactor sw flux calculation — eaton / githubweb
21. update ChangeLog with regression test results — john / githubweb
22. Added aux_pumas test suite, added first attempt at making pumas a valid configure and namelist option for microphysics. Added a test to make sure pumas and mg3 give the same results and it only passes when pumas is set to mg3 in configure right now. More work to do. — katec / githubweb
23. fix r8 issue in refractive_aerosol_optics_mod — fvitt / githubweb
24. refactor setting tsi to fix bug — eaton / githubweb
25. Correct default IC file for QPWmaC6 on ne5np4 grid — fvitt / githubweb
26. ChangeLog draft — fvitt / githubweb
27. Andrew's changes for more output — katec / githubweb
28. Found one more MG check — katec / githubweb
29. ChangeLog update — fvitt / githubweb
30. ChangeLog update — fvitt / githubweb
31. BIT_CHANGING for lscale setup. Updated configurable_model_flags.in and model_flags.F90 - CLUBB ticket #1102 (#1108) — noreply / githubweb
32. misc cleanup — eaton / githubweb
33. move files shared by rrtmg and rrtmgp to physics/cam — eaton / githubweb
34. Small change to get new outputs working with older code — katec / githubweb
35. bugfix for simple models; cleanup in cloud optics code — eaton / githubweb
36. Adding tests for Derecho as well — katec / githubweb
37. Likely BIT_CHANGING because of added output fields. Added code outputting C6_term and different Brunt Vaisala frequencies to disk - CLUBB ticket #1102 (#1109) — noreply / githubweb
38. more cleanup in cloud optics code — eaton / githubweb
39. convert wet species to dry before calling cam_thermo_dry_air_update — john / githubweb
40. refactor setting cloud_sw object — eaton / githubweb
41. se scam update — jet / githubweb
42. Add non-zero exit code to check for baselines. — fischer / githubweb
43. Bring in test_driver and externals — cacraig / githubweb
44. Update HEMCO external — cacraig / githubweb
45. Update Externals to new PUMAS tag — katec / githubweb
46. Use wallclock_limit for derecho walltime. — fischer / githubweb
47. Use wallclock_limit for cheyenne and casper walltime. — fischer / githubweb
48. Add missing character — cacraig / githubweb
49. Add definition for MGP test — katec / githubweb
50. Fix typo in HEMCO tagname — cacraig / githubweb
51. Remove python from derecho submits — cacraig / githubweb
52. separate accumulated and instantaneous fields — courtneyp / githubweb
53. remove old cloud optics; refactor setting cloud_sw & aer_sw objects — eaton / githubweb
54. Preliminary ChangeLog — cacraig / githubweb
55. Fixing bugs. — Gunther Huebler / githubweb
56. fix issue #690 — pel / githubweb
57. Changed sqrt_Ri_zm to Ri_zm in preparation of changing the exponent for calculation of invrs_tau_wpxp_zm in mixing_length.F90 - CLUBB ticket #1102 (#1110) — noreply / githubweb
58. BIT_CHANGING! Removed Richardson_num and all corresponding code - CLUBB ticket #1102 (#1111) — noreply / githubweb
59. bfb mods — jet / githubweb
60. refactor SW treatment of no daylight columns in chunk — eaton / githubweb
61. remove characters in comment — pel / githubweb
62. Remove ZM microphysics and cleanup for CCPP conversion — cacraig / githubweb
63. update buildlib to allow cesm to build fms for shared use. Previously cam was responsible for building libfms — john / githubweb
64. minor text updates — cacraig / githubweb
65. fix err msg wording for missing libfms library. — john / githubweb
66. Small perl bug fix in configure — katec / githubweb
67. Add missing if statement — cacraig / githubweb
68. Remove test which tested zmconv_micro — cacraig / githubweb
69. fix for ERP test of fvcubed dycore — jedwards / githubweb
70. refactor LW cloud and aerosol optics, flux calc — eaton / githubweb
71. misc cleanup; restore putting Q*dp in pbuf for energy conservation — eaton / githubweb
72. remove some debug output; add error check routine — eaton / githubweb
73. Add code mods needed to work with the latest version of the 'atmospheric_physics' external. — nusbaume / githubweb
74. Unused code deletion and update setting short-lived species fieldnames — elundgren / githubweb
75. Replace 'geopotential_t' calculation with CCPP version for SE and MPAS. — nusbaume / githubweb
76. Fix bugs needed to work with CCPP geopotential_t routine. — nusbaume / githubweb
77. Add 'water_species' property to fake const object. — nusbaume / githubweb
78. Replace SE dry static energy calculation with equivalent CCPP scheme. — nusbaume / githubweb
79. Adding/modifying scripts to make things work. Also a good time to include BIT_CHANGING. — Gunther Huebler / githubweb
80. Update to jenkinsfiles — Gunther Huebler / githubweb
81. Update to jenkinsfiles again — Gunther Huebler / githubweb
82. Update to jenkinsfiles again — Gunther Huebler / githubweb
83. Small updates — Gunther Huebler / githubweb
84. se scm updates to cmeps cdeps externals — jet / githubweb
85. print out missing file — john / githubweb
86. Updates to run script — Gunther Huebler / githubweb
87. update build for changes to rte-rrtmgp develop branch — eaton / githubweb
88. Fix bugs found during manual testing. — nusbaume / githubweb
89. Making setup script copy intel_nelson.cmake properly — Gunther Huebler / githubweb
90. Adding default caseroot replace in create_newcase — Gunther Huebler / githubweb
91. Setting r8029 flag corrently (according to settings in clubb/input/tunable_parameters_compatible_r8029) — Gunther Huebler / githubweb
92. Space to create new commit — Gunther Huebler / githubweb
93. fix issue with multiple grids with the same attribute(s) — courtneyp / githubweb
94. Changing the start date and turning debug flags on in r8029 coarse res run. — Gunther Huebler / githubweb
95. Space to create new commit — Gunther Huebler / githubweb
96. Making setup script setup the r8029 flag version as well. — Gunther Huebler / githubweb
97. Space to create new commit — Gunther Huebler / githubweb
98. fix bug in lat lon coords, append file type to user-supplied filespec — courtneyp / githubweb
99. Updated ChangeLog for cam6_3_129 — cacraig / githubweb
100. Add script to copy GEOS-Chem config files during case setup — elundgren / githubweb
101. Update deposition input file path used for GEOS-Chem — elundgren / githubweb
102. Copy GEOS-Chem configuration files from caseroot to run directory — elundgren / githubweb
103. Adding new diag history fields and updating some diag names — katec / githubweb
104. Update Externals for new new pumas tag — katec / githubweb
105. fixes issue #893 to archive derecho baselines - missed addition from last PR — john / githubweb
106. Cheryl code review updates. — nusbaume / githubweb
107. Add Changelog — john / githubweb
108. correct spelling error — john / githubweb
109. The ERP test now builds cprnc itself. — Gunther Huebler / githubweb
110. misc updates — fvitt / githubweb
111. Adding path to find nc-config — Gunther Huebler / githubweb
112. Jenkins script update — Gunther Huebler / githubweb
113. Fixing accidental delete — Gunther Huebler / githubweb
114. remove null() init in pointer declarations for thread safety — eaton / githubweb
115. revert derecho changes to testlist_cam.xml — fvitt / githubweb
116. use rga rather — fvitt / githubweb
117. include option 3 for pgf_formulation error message — fvitt / githubweb
118. namelist changes to match run 51 — cacraig / githubweb
119. cloud ice fraction changes for cam_dev — adamrhster / githubweb
120. Adding micro_mg_vtrms namelist for ppe — katec / githubweb
121. Adding flags back in, they just needed a little name change to match the namelist definition. — Gunther Huebler / githubweb
122. Update externals to point to pumas tag v1.34 — katec / githubweb
123. fix restarts — courtneyp / githubweb
124. another restart bug; update sct tests to reference new filename — courtneyp / githubweb
125. added namelists for wsub_min_asf, modified namelist defaults to reflect latest tunings — adamrhster / githubweb
126. Tunable Richardson number exponent - CLUBB ticket #1102 (#1114) — noreply / githubweb
127. swap cam_dev conditional for a new namelist, remove se gamma namelist default — adamrhster / githubweb
128. fix for sct tests and fix for restart tests that have only one type of history file — courtneyp / githubweb
129. Reverting changes to support pumas named microphysics and adding back in tests that I thought were a mistake but definately werent — katec / githubweb
130. Reverting more pumas support that doesn't work yet — katec / githubweb
131. Oops, missed a bracket — katec / githubweb
132. update ccs_config external — eaton / githubweb
133. code cleanup — courtneyp / githubweb
134. Raw-copy updating src/physics/clubb — root / githubweb
135. modify initialization in cam_dev to match cam — eaton / githubweb
136. Updates to copy GEOS-Chem files to case and then run directory — elundgren / githubweb
137. Additional Cheryl code review updates. — nusbaume / githubweb
138. Change cam case_setup script from bash to python — elundgren / githubweb
139. Fix typo in error message — elundgren / githubweb
140. Update externals to allow for derecho priority setting — cacraig / githubweb
141. address review requests — cacraig / githubweb
142. Change namelist based on verbal request from Adam, Cecile and Peter — cacraig / githubweb
143. Change PE layout to fix some derecho failures — cacraig / githubweb
144. change implementation to static array — courtneyp / githubweb
145. Add missing 'ncol' bounds to CCPP physics input arguments. — nusbaume / githubweb
146. Update to esmf path — Gunther Huebler / githubweb
147. Fix failing SPCAM test — cacraig / githubweb
148. Update externals to get job_priority setting on derecho — cacraig / githubweb
149. Deletes svn id tag, will trigger host-model nightly tests. — noreply / githubweb
150. Raw-copy updating src/physics/clubb — LarsonGroupSysAdmin / githubweb
151. Change GEOS-Chem acronym in compset long name from GC to GEOSCHEM — elundgren / githubweb
152. Update ChangeLog for cam6_3_131 — cacraig / githubweb
153. add units and calendar to time_bounds variable — courtneyp / githubweb
154. Update build-namelist to include wpxp_Ri_exp — 42725900+domkesteffen / githubweb
155. Update build-namelist — 42725900+domkesteffen / githubweb
156. Update namelist_defaults_cam.xml to include CLUBB parameter wpxp_Ri_exp — 42725900+domkesteffen / githubweb
157. Update namelist_definition.xml to include CLUBB parameter wpxp_Ri_exp — 42725900+domkesteffen / githubweb
158. Update run_cesm_uwm_coarse_res_r8029_flags.sh to include CLUBB parameter wpxp_Ri_exp — 42725900+domkesteffen / githubweb
159. Update clubb_intr.F90 to include CLUBB parameter wpxp_Ri_exp — 42725900+domkesteffen / githubweb
160. Update cam_profile_plotter_multicol.py — 42725900+domkesteffen / githubweb
161. Update user_nl_cam — 42725900+domkesteffen / githubweb
162. Update run_scam.bash — 42725900+domkesteffen / githubweb
163. Update run_cesm_uwm.sh — 42725900+domkesteffen / githubweb
164. Update run_cesm_uwm_coarse_res.sh — 42725900+domkesteffen / githubweb
165. Update run_cesm_uwm_coarse_res_gpu_no_silhs.sh — 42725900+domkesteffen / githubweb
166. Update run_cesm_uwm_coarse_res_r8029_flags.sh — 42725900+domkesteffen / githubweb
167. Change GEOS-Chem namelist and its parameter to use geoschem not gc — elundgren / githubweb
168. add limits on P and T for FMTHIST — eaton / githubweb
169. Updates for paper, SE grid compatibility, bug fixes — jimmie.lin / githubweb
170. ChangeLog for cam6_3_132 — cacraig / githubweb
171. fix namelist and cloud optics indexing for waccm — eaton / githubweb
172. Changing runscripts back to using two mpi tasks. — Gunther Huebler / githubweb
173. Slight formatting updates to GEOS-Chem run log output — jimmie.lin / githubweb
174. update ChangeLog — fvitt / githubweb
175. update ChangeLog — fvitt / githubweb
176. Remove svn id tag in order to trigger nightly tests. — noreply / githubweb
177. fix for dims with bnds; make field indexing consistent — courtneyp / githubweb
178. make field indexing consistent; remove satfile file loop — courtneyp / githubweb
179. Removed 3rd svn id tag in order to trigger nightly tests — noreply / githubweb
180. replace 1 by ktopcam in a few places for high top models — eaton / githubweb
181. add parameters for split file indices — courtneyp / githubweb
182. better logging — courtneyp / githubweb
183. remove unnecessary loop — courtneyp / githubweb
184. fix indices — courtneyp / githubweb
185. Update GEOS-Chem external tag to 14.1.2 — jimmie.lin / githubweb
186. Remove unnecessary comment about NTHRDS — elundgren / githubweb
187. add parameters for sat, restart, and init file indices — courtneyp / githubweb
188. Modfy calling sequences to allow for removal of zm_common — cacraig / githubweb
189. clean up File indexing logic — courtneyp / githubweb
190. Changes to addres initial review comments — katec / githubweb
191. add tests; update ChangeLog — eaton / githubweb
192. Finally removing scratch variables. (#1116) — noreply / githubweb
193. fix tests — eaton / githubweb
194. This should have been commited yesterday alongside the clubb changes, RESOLVED:707b19871c01372e732e7712a0076db01e02ae17 — Gunther Huebler / githubweb
195. Update mpas external to use v8.0.1 — gdicker / githubweb
196. Replacing the calculation of first_call in a logically equivalent way. — Gunther Huebler / githubweb
197. Additional code review updates. — nusbaume / githubweb
198. Switch atmospheric_physics external to the new ESCOMP URL. — nusbaume / githubweb
199. Rename SE dycore time_mod to dyn_time_mod — nusbaume / githubweb
200. Rename to se_dyn_time_mod instead of dyn_time_mod — nusbaume / githubweb
201. Update 'errmsg' strings to be empty for CAM-specific CCPP routines. — nusbaume / githubweb
202. Update Externals_CAM.cfg to use hash as 14.1.2 matches branch as well — jimmie.lin / githubweb
203. Revert "Update Externals_CAM.cfg to use hash as 14.1.2 matches branch as well" — jimmie.lin / githubweb
204. Initial ChangeLog — gdicker / githubweb
205. Fix dimension error in Kessler 'prec_sed' argument. — nusbaume / githubweb
206. Remove badly-placed line continuation character. — nusbaume / githubweb
207. Suggested changes to cam.case_setup.py — elundgren / githubweb
208. Fix bug and change error messages in cam.case_setup.py — elundgren / githubweb
209. Update ChangeLog. — nusbaume / githubweb
210. Latest batch of non-bit changing code changes - CLUBB ticket #1115 (#1119) — noreply / githubweb
211. BIT_CHANGING! Fixed some issues with wpxp_Ri_exp, changed z_displace value - CLUBB ticket #1115 (#1120) — noreply / githubweb
212. address reviewer comments — courtneyp / githubweb
213. remove unused variable — courtneyp / githubweb
214. fix looping range — courtneyp / githubweb
215. Addressing review comments — katec / githubweb
216. Remove the FCSD_GC compset — elundgren / githubweb
217. Remove NTHRDS overrides for GEOS-Chem — elundgren / githubweb
218. Correct namelist file changes in ChangeLog — gdicker / githubweb
219. Remove redundant includes of src/hemco in .gitignore — elundgren / githubweb
220. Updated CLUBB so that adj_low_res_nu (which can be called on its own — bmg2 / githubweb
221. Updated the CLUBB interface for a change in CLUBB. — bmg2 / githubweb
222. logic to add file type flag to right part of hfilename_spec, updates to treat nhtfrq = 1 as instantaneous — courtneyp / githubweb
223. change time_op value to "point" for instantaneous fields — courtneyp / githubweb
224. Removing begin_height and end_height as outputs from setup_grid. They — bmg2 / githubweb
225. Updated for recent changes to CLUBB. — bmg2 / githubweb
226. Z displace tunable (#1122) — noreply / githubweb
227. Update build-namelist — 42725900+domkesteffen / githubweb
228. Update namelist_defaults_cam.xml — 42725900+domkesteffen / githubweb
229. Update namelist_definition.xml — 42725900+domkesteffen / githubweb
230. Update run_cesm_uwm_coarse_res_r8029_flags.sh — 42725900+domkesteffen / githubweb
231. Update clubb_intr.F90 — 42725900+domkesteffen / githubweb
232. Update subcol_SILHS.F90 for changes to the call to CLUBB's setup_grid_api — noreply / githubweb
233. Making work with latest clubb changes. — Gunther Huebler / githubweb
234. Changing stat_indices to stats_metadata_type — Gunther Huebler / githubweb
235. New Stats Indices Type (#1118) — noreply / githubweb
236. New Stats Indices Type (#1118) — noreply / githubweb
237. removes svn sparse checkout and uses git sparse checkout for all repos, combine clubb and silhs into clubb — jedwards / githubweb
238. add final carrage returns — jedwards / githubweb
239. Modify COSP2 checkout to remove un-used directories/files. — nusbaume / githubweb
240. Fix paths, including a mistake introduced on my end. — nusbaume / githubweb
241. Changing order of sqrt and **3 to improve stability, see clubb#1126. Since this is a change to the order of operations, it is BIT_CHANGING. — Gunther Huebler / githubweb
242. Setting the minimum tolerance to be epsilon, this is BIT_CHANGING but only for single precision. See larson-group/clubb#1126 — Gunther Huebler / githubweb
243. BIT_CHANGING! Updated taus code calculations - CLUBB ticket #1115 (#1125) — noreply / githubweb
244. Exit with warning in build-namelist if hemco_config_file or hemco_diagn_file are specified in user namelist. — jimmie.lin / githubweb
245. Fix typo; indent with spaces — jimmie.lin / githubweb
246. Update externals to match cesm2_3_alpha16g — cacraig / githubweb
247. Update ccs_config external — cacraig / githubweb
248. Fix COSP Makefile paths. — nusbaume / githubweb
249. Split master deposition lists into two: mozart and geoschem — elundgren / githubweb
250. Fix failing TMC tests — cacraig / githubweb
251. Revert dep_data_file input_pathname to "abs"; use new file for geoschem — elundgren / githubweb
252. Update ChangeLog. — nusbaume / githubweb
253. Added non-trapezoidal zm interpolation for cloud_frac (#1127) — noreply / githubweb
254. Update PE layouts for derecho — cacraig / githubweb
255. back off ccs_config external — cacraig / githubweb
256. Fix failing derecho test — cacraig / githubweb
257. Add derecho testing to ChangeLog template — cacraig / githubweb
258. Update ChangeLog for cam6_3_136 — cacraig / githubweb
259. add namelist control for nstep==0 output — eaton / githubweb
260. aircraft emissions for LT and MT compsets — fvitt / githubweb
261. derecho pelayouts for ne30 waccm and camchem — fvitt / githubweb
262. more derecho pelayouts changes for waccm(x) and camchem — fvitt / githubweb
263. scam updates — jet / githubweb
264. external updates for scam_dev 6_3_136 — jet / githubweb
265. missed cice external update for scam — jet / githubweb
266. scam se update — jet / githubweb
267. Update description of mpas_cam_coef — gdicker / githubweb
268. Set mpas_cam_damping_levels default to 3, update description — gdicker / githubweb
269. write nstep0 for tests w/ multiple timesamples per file — eaton / githubweb
270. Default mpas_cam_damping_levels to 0 — gdicker / githubweb
271. start ChangeLog entry — eaton / githubweb
272. remove check for "FV only" zonal mean fields — eaton / githubweb
273. Use mpas_cam_damping in F2000climo mpasa480 grid aux_cam test — gdicker / githubweb
274. Correct ChangeLog order after merging cam_development — gdicker / githubweb
275. Change derecho baselinedir in archive_baselines.sh — gdicker / githubweb
276. modify waccmx use case file to only add zonal mean fields for FV — eaton / githubweb
277. Re-adjusted cap for invrs_tau_wpxp in src/CLUBB_core/mixing_length.F90 — Steffen Domke / githubweb
278. remove unneeded lnd files from mpas testmods — eaton / githubweb
279. Update ChangeLog for cam6_3_137 — gdicker / githubweb
280. always create instantaneous file; write time-dependent fields to inst. file only — courtneyp / githubweb
281. address reviewer comments — courtneyp / githubweb
282. derecho tests and pe layout — fvitt / githubweb
283. remove derecho tests; ChangeLog draft — fvitt / githubweb
284. ChangeLog update — fvitt / githubweb
285. ChangeLog update — fvitt / githubweb
286. ChangeLog draft — fvitt / githubweb
287. ChangeLog Update — fvitt / githubweb
288. ChangeLog update — fvitt / githubweb
289. ChangeLog update — fvitt / githubweb
290. start ChangeLog for misc PR — eaton / githubweb
291. fix single executable plb test — eaton / githubweb
292. calculate midpoint date and datesec for accumulated file — courtneyp / githubweb
293. fix sct tests — courtneyp / githubweb
294. initial changelog — courtneyp / githubweb
295. update ChangeLog — eaton / githubweb
296. fix several outfld calls — eaton / githubweb
297. fix for SILHS history output — eaton / githubweb
298. update ChangeLog — eaton / githubweb
299. updated changelog — courtneyp / githubweb
300. write nstep0 from more tests — eaton / githubweb
301. update ChangeLog and ChangeLog_template — eaton / githubweb
302. reduce memory footprint when writing CSLAM IC files — fvitt / githubweb
303. Fix for FSCAM — katec / githubweb
304. Point to updated PUMAS external — katec / githubweb
305. Adding boundary conditions for the wp3_term_ta_ADG1_lhs subroutine. — Brian Griffin / githubweb
306. For single loop vectors, removing the "collapse(2)" from the acc statements. — Brian Griffin / githubweb
307. update ChangeLog — eaton / githubweb
308. check allocate status — fvitt / githubweb
309. Added new Brunt-Väisälä frequency plots to pyplotgen's VariableGroupTaus — Vince Larson / githubweb
310. Adds commas to fix bug — noreply / githubweb
311. implement fvm2phys mapping for single tracer — fvitt / githubweb
312. Fix compilation error — cacraig / githubweb
313. update ChangeLog — eaton / githubweb
314. address some reviewer comments — cacraig / githubweb
315. Addressing review comments — katec / githubweb
316. Initial add of moving mountain GW source — juliob / githubweb
317. Updating the code to set the bottom of the thermodynamic level grid for — Brian Griffin / githubweb
318. Commit to enforce a fixed-point boundary condition of wp3=0 at — Brian Griffin / githubweb
319. ChangeLog draft — fvitt / githubweb
320. ChangeLog update — fvitt / githubweb
321. Add ability to output UGUST variable from coupler. — mdfowler / githubweb
322. ChangeLog update — fvitt / githubweb
323. ChangeLog update — fvitt / githubweb
324. With wp3 now being set to a fixed-point boundary condition value — bmg2 / githubweb
325. Revert to non-answer changing for cam_dev compsets — katec / githubweb
326. Fixing alignment issues — mdfowler / githubweb
327. start with basics — jedwards / githubweb
328. Remove cheyenne testing and make all cheyenne tests be derecho ones — cacraig / githubweb
329. Update ChangeLog and remove comment — katec / githubweb
330. Correct date for cam6_3_144 — katec / githubweb
331. remove cheyenne from archive_baselines — cacraig / githubweb
332. Update CMEPS in Externals.cfg — mdfowler / githubweb
333. UWM changes to namelist files for new clubb external — katec / githubweb
334. scam se updates — jet / githubweb
335. module based method, sparse working — jedwards / githubweb
336. Threadpublic (#1133) — noreply / githubweb
337. Threadpublic (#1133) — noreply / githubweb
338. First commit to make compatible with latest clubb changes. — 37674341+huebleruwm / githubweb
339. More updates to make work with clubb change. — 37674341+huebleruwm / githubweb
340. Hopefully final update to make work the clubb's threadpublic branch. Using 1 mpi proc we have achieved BFBness with or without silhs. — 37674341+huebleruwm / githubweb
341. Removing testing changes — 37674341+huebleruwm / githubweb
342. now works two ways — jedwards / githubweb
343. Removing awkward nan check in favor of a default for Ncnp2_on_Ncnm2 — Gunther Huebler / githubweb
344. complete the tools — jedwards / githubweb
345. worked on outputs — juliob / githubweb
346. worked more on outputs — juliob / githubweb
347. more fixes — jedwards / githubweb
348. submodule needs path not name — jedwards / githubweb
349. Fixing bug that only crops up with intel+debugging — Gunther Huebler / githubweb
350. improve error checking — jedwards / githubweb
351. add more logging — jedwards / githubweb
352. submodule always usees shell — jedwards / githubweb
353. fix toplevel — jedwards / githubweb
354. fix toplevel — jedwards / githubweb
355. try again — jedwards / githubweb
356. add command line options and support for update — jedwards / githubweb
357. fix new issues — jedwards / githubweb
358. update esmrequired variable — jedwards / githubweb
359. Increased wallclock time for one test on derecho — katec / githubweb
360. fix recursive issue — jedwards / githubweb
361. update cime external — courtneyp / githubweb
362. Finalize ChangeLog — katec / githubweb
363. add status flag support — jedwards / githubweb
364. add a gitmodules class — jedwards / githubweb
365. now renamed git-fleximod for git interface — jedwards / githubweb
366. clean up and refactor, rename to git-fleximod — jedwards / githubweb
367. add version.txt and .pre-commit-config.yaml — jedwards / githubweb
368. fix issue in update — jedwards / githubweb
369. make action a required subargument to look more like a git subcommand — jedwards / githubweb
370. add documentation — jedwards / githubweb
371. add README and License — jedwards / githubweb
372. update README — jedwards / githubweb
373. trying to improve markdown formatting — jedwards / githubweb
374. trying to improve markdown — jedwards / githubweb
375. trying to improve markdown — jedwards / githubweb
376. trying to improve markdown — jedwards / githubweb
377. add pip setup.py file — jedwards / githubweb
378. bug fix — jedwards / githubweb
379. improve messages — jedwards / githubweb
380. fix some issues in sparse checkout — jedwards / githubweb
381. need to replace ssh with https — jedwards / githubweb
382. change from ssh to https — jedwards / githubweb
383. fix ssh issue — jedwards / githubweb
384. remove debug print statments — jedwards / githubweb
385. fix issue with sparse checkout — jedwards / githubweb
386. Adding new argument list variables to openacc copyin statements — Gunther Huebler / githubweb
387. more error checking — jedwards / githubweb
388. hack to prevent file corruption — jedwards / githubweb
389. ignore untracked files in submodules — jedwards / githubweb
390. scam clean and updates for derecho — john / githubweb
391. a better solution to the file coruption issue — jedwards / githubweb
392. awkward solution for ssh urls — jedwards / githubweb
393. remove debug print statements — jedwards / githubweb
394. Merged in UWM code changes to clubb_intr — katec / githubweb
395. update for distribution — jedwards / githubweb
396. Cherry picked changes from NCAR (https://github.com/ESCOMP/CAM/commit/8a07c9e37cb5028b08cf0c66d6505e9c60b691c0) to switch svn to git. — Gunther Huebler / githubweb
397. Undoing some of the cherry picked changes. These seem related to moving the clubb and silhs code to different directories, which we would have to reflect in our git structure before including. — Gunther Huebler / githubweb
398. fix error with version flag — jedwards / githubweb
399. update version to 0.1.4 — jedwards / githubweb
400. UWM updates for SILHS — katec / githubweb
401. I am altering the mean advection code in preparation for ghost point — bmg2 / githubweb
402. Making commit to fix nightly tests, they had failed because of git dropping svn support, which has been fixed by the previous two commits. RESOLVED:9be0cef04a0a87e891e8274b1cefd661c25b0d0b — Gunther Huebler / githubweb
403. Only pass ncols to ZM routines — cacraig / githubweb
404. Point to new CLUBB External — katec / githubweb
405. Few more small changes from larson-group — katec / githubweb
406. fix issues with rerunning — jedwards / githubweb
407. update setup.py — jedwards / githubweb
408. update version — jedwards / githubweb
409. geometry works — juliob / githubweb
410. provide more info for status of uninstalled submodules — jedwards / githubweb
411. Fixing tridiag solver bug. See https://github.com/larson-group/clubb/issues/1139 — Gunther Huebler / githubweb
412. Update bld/configure — noreply / githubweb
413. Clean up GEOS-Chem code in configure based on suggestions from Brian Easton — elundgren / githubweb
414. add test action — jedwards / githubweb
415. Slight rework to acc data statements. This allows us to use return calls in advance_clubb_core again. See https://github.com/larson-group/clubb/issues/1139 — Gunther Huebler / githubweb
416. Fixing small GPU stats bug — Gunther Huebler / githubweb
417. Changing xm to out in mono flux solver. There is no need for it to be inout, and it confused me for a bit so I'm fixing it. — Gunther Huebler / githubweb
418. address final reviewer comments — cacraig / githubweb
419. Remove CAM3 test since no longer supported — cacraig / githubweb
420. bug fix for iopTimeIdx when iop step size is smaller than model timestep — jet / githubweb
421. Adding clubb specific compiler flag -DCLUBB_GPU, intended for use with openmp or openacc running on the GPU. Also adding a compiler flags, -DCUDA, and case statment for generating random numbers in silhs. — Gunther Huebler / githubweb
422. Adding clubb specific compiler flag -DCLUBB_GPU, intended for use with openmp or openacc running on the GPU. Also adding a compiler flags, -DCUDA, and case statment for generating random numbers in silhs. — Gunther Huebler / githubweb
423. PR updates for Cheryl and Jim — jet / githubweb
424. Remove unnecessary changes made for GEOS-Chem; minor bug fix for GNU — elundgren / githubweb
425. Add missing ncol declaration — cacraig / githubweb
426. science-optimized dycore - stabilize WACCM — pel / githubweb
427. ChangeLog for cam6_3_146 — cacraig / githubweb
428. Now that the value of wp3 is being set to a boundary value of 0 — bmg2 / githubweb
429. update RRTMGP externals — eaton / githubweb
430. Addressing some review comments — katec / githubweb
431. resolve issue #864 (qneg) — pel / githubweb
432. change default topo file for ne30gp3 (read in PHIS in GLL grid); remove — pel / githubweb
433. remove ifdef old_cam — pel / githubweb
434. Revert setting GEOS-Chem $chem_cppdefs to earlier in configure — elundgren / githubweb
435. Remove project paths to GEOS-Chem inputs; now stored in inputdata — elundgren / githubweb
436. forgot to remove ifndef old_cam — pel / githubweb
437. remove comment — pel / githubweb
438. fix previous commit — pel / githubweb
439. remove ifndef old_cam — pel / githubweb
440. complete previous commit — pel / githubweb
441. add changelog message — pel / githubweb
442. minor modification to changelog — pel / githubweb
443. This is (amazingly) BIT_CHANGING. The differences are due to some compiler optimizations, see https://github.com/larson-group/clubb/pull/1133\#issuecomment-1865156979. — Gunther Huebler / githubweb
444. Addressing more initial review comments — katec / githubweb
445. Updated GEOs-Chem tests from cheyenne to derecho — elundgren / githubweb
446. Add categories prealpha and aux_cam to all GEOS-Chem compset tests — elundgren / githubweb
447. fix issue with status — jedwards / githubweb
448. update version — jedwards / githubweb
449. Delete redundant setting of deposition lists in namelists — elundgren / githubweb
450. Reduce GEOS-Chem tests to one aux_cam and one prealpha across two compsets — elundgren / githubweb
451. Fixed some oopses — katec / githubweb
452. Change FCnudged_GC derecho test to not use zonal mean nudging — elundgren / githubweb
453. address review comments — eaton / githubweb
454. Removing backslashes. These should be slashes, but gnu,intel,nvidia generate code that treats slashes as whitespace and backslashes as a character, while cray treats backslashes as whitespace as well. This is easily fixed by using quotes, and in the meantime we will change the backslashes to forward slashes. See https://github.com/larson-group/clubb/issues/1138\#issuecomment-1910844013 — Gunther Huebler / githubweb
455. skip over geoschem in r8 kind checker — fvitt / githubweb
456. Update Changelog — elundgren / githubweb
457. include commit and time limit to goes-chem tests — fvitt / githubweb
458. cleaner format for status output, fix for special handling of ssh submodules, fix for 0 length log — jedwards / githubweb
459. check for permission in fleximod.log file — jedwards / githubweb
460. fix issue with ssh submodule checkout — jedwards / githubweb
461. add --force option and cowardly refusal — jedwards / githubweb
462. start at root git dir unless --path flag is used — jedwards / githubweb
463. remove test from visable options — jedwards / githubweb
464. update setup.cfg — negin513 / githubweb
465. updates for setup.py — negin513 / githubweb
466. setup.cfg — negin513 / githubweb
467. pointing to the better solution — negin513 / githubweb
468. minimal changes required — negin513 / githubweb
469. updates to setup.cfg — negin513 / githubweb
470. minor changes — negin513 / githubweb
471. fix syntax and new function name — negin513 / githubweb
472. names were too similar, force needs to be optional — jedwards / githubweb
473. update ChangLog — fvitt / githubweb
474. more cleanup — jedwards / githubweb
475. pre-commit cleanup — jedwards / githubweb
476. setup.py builds manpage but doesnt install — jedwards / githubweb
477. update version — jedwards / githubweb
478. update README — jedwards / githubweb
479. add support for fxhash variable in .gitmodules — jedwards / githubweb
480. working on poetry — jedwards / githubweb
481. more poetry and sphinx — jedwards / githubweb
482. Bump to 0.5.0 — jedwards / githubweb
483. reformed to work with poetry — jedwards / githubweb
484. add a simple import test — jedwards / githubweb
485. now includes man pages — jedwards / githubweb
486. update tbump path — jedwards / githubweb
487. Bump to 0.6.0 — jedwards / githubweb
488. fix issue with hyphen — jedwards / githubweb
489. Bump to 0.6.1 — jedwards / githubweb
490. Update topo file path to official inputdata repo path in namelist defaults file. — nusbaume / githubweb
491. use broadband flux objects for clear-sky calcs — eaton / githubweb
492. address review comments — eaton / githubweb
493. fix issue with sparse checkout dir path — jedwards / githubweb
494. Bump to 0.6.2 — jedwards / githubweb
495. fix filename in namelist defaults file — eaton / githubweb
496. Fixing a bug where the Lscale used in calculating the damping — bmg2 / githubweb
497. update externals to match alpha17a — cacraig / githubweb
498. adding equals sign cuz I've had it up to here with this typo! — benjamin.andrew.stephens / githubweb
499. Remove use of deprecated 'imp' module in python scripts (Github issue #970). — nusbaume / githubweb
500. add tests — jedwards / githubweb
501. add pytest to workflow — jedwards / githubweb
502. add pytest to workflow — jedwards / githubweb
503. add pytest fixtures — jedwards / githubweb
504. all working — jedwards / githubweb
505. clean up and combine tests — jedwards / githubweb
506. all tests passing — jedwards / githubweb
507. thought it was working?? — jedwards / githubweb
508. address review comments — eaton / githubweb
509. fixing bug, name of wm_zt was left as "wm" — Vince Larson / githubweb
510. test_complex is still a work in progress — jedwards / githubweb
511. update should checkout if needed — jedwards / githubweb
512. restructure of tests working — jedwards / githubweb
513. Add blank line in order to trigger Jenkins tests for CAM — noreply / githubweb
514. Small acc tweaks (#1144) — noreply / githubweb
515. all tests are passing and complete — jedwards / githubweb
516. add git user info to tests — jedwards / githubweb
517. remove checkout user option — jedwards / githubweb
518. remove fxhash, putting hash in tag works fine — jedwards / githubweb
519. update version — jedwards / githubweb
520. Update cime tag — cacraig / githubweb
521. stat check — pel / githubweb
522. Update src/dynamics/se/dycore/fvm_mapping.F90 — noreply / githubweb
523. change comment — pel / githubweb
524. minor mod — pel / githubweb
525. fix compiltation error — pel / githubweb
526. minor mod — pel / githubweb
527. Update src/physics/cam/vertical_diffusion.F90 — noreply / githubweb
528. minor clean-up — pel / githubweb
529. Update src/dynamics/se/dycore/fvm_mapping.F90 — noreply / githubweb
530. Update src/dynamics/se/dycore/fvm_mapping.F90 — noreply / githubweb
531. add comment — pel / githubweb
532. add comment — pel / githubweb
533. Update src/dynamics/se/dp_coupling.F90 — noreply / githubweb
534. Update src/dynamics/se/dp_coupling.F90 — noreply / githubweb
535. Update src/dynamics/se/dycore/fvm_mapping.F90 — noreply / githubweb
536. add description — pel / githubweb
537. simplify code — pel / githubweb
538. fix — pel / githubweb
539. fix indentation — pel / githubweb
540. reduce code length — pel / githubweb
541. fix compilation error — pel / githubweb
542. fix dycore budgets — pel / githubweb
543. address review comments — eaton / githubweb
544. Update TMC test — cacraig / githubweb
545. update ChangeLog — eaton / githubweb
546. Fix failing tests — cacraig / githubweb
547. Add a couple more prealpha tests — cacraig / githubweb
548. add translater from manage_externals — jedwards / githubweb
549. Update ChangeLog for cam6_3_149 — cacraig / githubweb
550. Add allocation checks and update ChangeLog. — nusbaume / githubweb
551. changelog updates — courtneyp / githubweb
552. change allocation size — pel / githubweb
553. Update namelist settings — cacraig / githubweb
554. restructure code — pel / githubweb
555. check for error with mpi_bcast calls — john / githubweb
556. Add 'allocated' check for kvm_sponge. — nusbaume / githubweb
557. Re-add mistakenly deleted if statement. — nusbaume / githubweb
558. Don't allocate kvm_sponge if it is not being used. — nusbaume / githubweb
559. update README and improve me2flexi — jedwards / githubweb
560. fv3 updates to bring in more current fms tag. Created fv3 interface directory brought in as an external which points back to GFDL to get the fv3 library code — jet / githubweb
561. Remove obsolete file README_EXTERNALS — cacraig / githubweb
562. ChangeLog updates — jet / githubweb
563. correcting version — jedwards / githubweb
564. Bump to 0.7.0 — jedwards / githubweb
565. code cleanup — jedwards / githubweb
566. Fix syntax error found during testing. — nusbaume / githubweb
567. PR requested updates — jet / githubweb
568. compile catch/fix for se_single_column_mod — jet / githubweb
569. Removes comment about Numerical Recipes — noreply / githubweb
570. shorten a few long lines >132 — jet / githubweb
571. bugfix for new minloc replacement for loop with exit — jet / githubweb
572. namelist_default not setting WACCM-x variables correctly since — pel / githubweb
573. Convert CLUBB error locations from rad to degrees — katec / githubweb
574. Update hist list for subcolumns and add clubb_diags test output to mg3 test defs — katec / githubweb
575. update ice external tag — jet / githubweb
576. Addressing review comments — katec / githubweb
577. fix so that all three flavors of intel compiler are recognized on derecho — jedwards / githubweb
578. Split wind variable into two variables — cacraig / githubweb
579. Rename directory to zhang_mcfarlane — cacraig / githubweb
580. Put back in namelist logging — cacraig / githubweb
581. dont need these cdep mods — john / githubweb
582. Remove jctop, jcbot from zm_convr_run calling list — cacraig / githubweb
583. Remove unused pflx variable and set placeholder tag for atmospheric_physics external — cacraig / githubweb
584. Update U10 to be resolved wind; add variable for U10+gusts — mdfowler / githubweb
585. update cleanup — jedwards / githubweb
586. Move a couple of outfld calls — cacraig / githubweb
587. update cleanup — jedwards / githubweb
588. all tests passing — jedwards / githubweb
589. more cleanup and comments — jedwards / githubweb
590. fix restart issue — pel / githubweb
591. Use lapack routine to solve matrix eq for E-field boundary calc — fvitt / githubweb
592. save memory by dynamic allocation of elem% variables — pel / githubweb
593. Separate four additional wind variables — cacraig / githubweb
594. init ipiv with integer 0 — fvitt / githubweb
595. OpenMP Optimizations (#1146) — noreply / githubweb
596. changes for nag nan test — fvitt / githubweb
597. fix issue with sd_waccmx_ma_cam6 use case — fvitt / githubweb
598. fix py3.11 issue in gitinterface — jedwards / githubweb
599. Fix allocation errors found during testing. — nusbaume / githubweb
600. fix to allow multiple monthly avg history files — eaton / githubweb
601. start ChangeLog entry — eaton / githubweb
602. update ChangeLog — eaton / githubweb
603. Fix typo — cacraig / githubweb
604. fix bug on sponge settings for WACCM — peter.hjort.lauritzen / githubweb
605. code cleanup for O2 abs cross sections — fvitt / githubweb
606. Adding comment to explain unusual code choice. — Gunther Huebler / githubweb
607. add one more location for setting of dust_emis_fact with SE dycore — cacraig / githubweb
608. Update FADIAB test to use ne5pg3 grid, and finalize ChangeLog. — nusbaume / githubweb
609. Adding sum part to comment — Gunther Huebler / githubweb
610. Update ChangeLog for cam6_3_153 — cacraig / githubweb
611. Small bug fix — katec / githubweb
612. Update CMEPS to get U10 changes and CDEPS needed to work with that version of CMEPS — cacraig / githubweb
613. explain M flag — jedwards / githubweb
614. CLUBB diagnostics test update plus addressing Adams review — katec / githubweb
615. fixes issue with ssh access to github (should not be required) — jedwards / githubweb
616. better error handling for not a tag — jedwards / githubweb
617. Bump to 0.7.3 — jedwards / githubweb
618. set python 3.7 as min version requirement — jedwards / githubweb
619. mods to limit COSP top — eaton / githubweb
620. rename fxurl — jedwards / githubweb
621. Remove threadprivate calls for stats (not needed) — katec / githubweb
622. Update testlist to include a threaded FV test — katec / githubweb
623. Putting ngrdcol in clubb_params (#1147) — noreply / githubweb
624. Fixing bug with C6 parameters, see https://github.com/larson-group/clubb/pull/1147. This is technically BIT_CHANGING, but only when C6thl != C6thlb and l_diag_Lscale_from_tau=.false. — Gunther Huebler / githubweb
625. Address review comments — katec / githubweb
626. Rainbows testing added to aux_pumas tests, not aux_cam — katec / githubweb
627. Making compatible with latest clubb changes. Omitting these changes broke the bit diff tests, so RESOLVED:e0a868cc878ff72458edfa35cddcfa4c52ca23f9 RESOLVED:48f2a12737dc499dd1ff3703ca350bb5ae52bc6e — Gunther Huebler / githubweb
628. Adding space to make commit because the last commit fixed the code, and that means it was technically bit changing, so RESOVLED:bd5c54cf32b9d84bcf5e5d1e4ca722a64cdc3519 — Gunther Huebler / githubweb
629. Update CMEPS and CDEPS to latest tags — cacraig / githubweb
630. fix tests on izumi — jedwards / githubweb
631. fix issue in metoflexi — jedwards / githubweb
632. Update CMEPS for bugfix for NAG — cacraig / githubweb
633. mods to limit COSP top — eaton / githubweb
634. Update ChangeLog for cam6_3_154 — cacraig / githubweb
635. At the ghost point below the surface, which does not matter in — bmg2 / githubweb
636. The code that advances um and vm when l_predict_upwp_vpwp is turned off — bmg2 / githubweb
637. It was discovered that the location where the ghost point values — bmg2 / githubweb
638. While it doesn't affect results, I fixed what appears to be an — bmg2 / githubweb
639. I am updating the loop in subroutine diagnose_xpwp so that it doesn't — bmg2 / githubweb
640. add coordinate trop_pref — eaton / githubweb
641. cosp outputs use new vertical coords as appropriate — eaton / githubweb
642. This commit is being made to keep the stats zt output from the — bmg2 / githubweb
643. merge cam/physpkg.F90 changes to cam_dev/physpkg.F90 — eaton / githubweb
644. New threaded test hitting wallclock limit in aux_cam suite. Increased limit — katec / githubweb
645. I am committing a bug fix to the code that calculates mixed Brunt — bmg2 / githubweb
646. address compiler messages for cospsimulator_intr — eaton / githubweb
647. Update ChangeLog — katec / githubweb
648. I am committing a stats change to the ghost point values of zt — bmg2 / githubweb
649. fix interface height and pressure inputs — eaton / githubweb
650. minor changes — fvitt / githubweb
651. rename limit params — fvitt / githubweb
652. add ChangeLog — eaton / githubweb
653. Address reviewer comments — cacraig / githubweb
654. use case sd_waccmx_ma_cam6 change for waccm_mad_mam5 chem — fvitt / githubweb
655. ChangeLog draft — fvitt / githubweb
656. PR requested updates — john / githubweb
657. ChangeLog update — fvitt / githubweb
658. ChangeLog update — fvitt / githubweb
659. small correction in comment — john / githubweb
660. fix for restart with COSP — eaton / githubweb
661. Update external — cacraig / githubweb
662. remove old topo file generation tools — eaton / githubweb
663. [ 50 character, one line summary ] — john / githubweb
664. Update to new PUMAS tag (fix gpu bugs) — katec / githubweb
665. Update cime external — cacraig / githubweb
666. New ccs_config tag needed for GPU fixes — katec / githubweb
667. Committing some thresholding around positive-definite fields after — bmg2 / githubweb
668. update ChangeLog — eaton / githubweb
669. Update to newer cime tag — cacraig / githubweb
670. PR updates for Jesse — jet / githubweb
671. PR updates — jet / githubweb
672. Changing the linear interpolation in the zt2zm function at momentum — bmg2 / githubweb
673. Fix gitignore for FV3 — cacraig / githubweb
674. PR updates — jet / githubweb
675. Address Cheryls review comments — katec / githubweb
676. Add ChangeLog for cam6_3_158 — cacraig / githubweb
677. initial changes — fvitt / githubweb
678. if submodule does not exist add it — jedwards / githubweb
679. create parent if it doesnt exist — jedwards / githubweb
680. Bump to 0.7.4 — jedwards / githubweb
681. I'm changing the way ddzt handles the derivative over momentum level 1. — bmg2 / githubweb
682. change cam_dev to cam7 — eaton / githubweb
683. Changes to work with subcolumns and scm — katec / githubweb
684. Update prealpha suite to include problematic test — katec / githubweb
685. Update ChangeLog — katec / githubweb
686. workaround so that sct works on derecho — jedwards / githubweb
687. Bring in fix for SCT (but breaks derecho test until ccs_config_cesm0.0.99 is brought in — cacraig / githubweb
688. dadadj ccpp updates — john / githubweb
689. Moved the ghost-point setting of xm(1) = xm(2) to the last line — bmg2 / githubweb
690. use temporary cmep external for testing — eaton / githubweb
691. working version - fallback — juliob / githubweb
692. Optional arguments are just best sometimes (#1150) — noreply / githubweb
693. Fixing bug. RESOLVED:556370c6406e6b943b88affbe7728a5036b1ba22, this was catchable by using debugging flags, but seems to otherwise cause no issues. Investigating I found that it only clips the below ground level, so that must not have been affecting other levels. This is technically BIT_CHANGING since it resolves an issue. — Gunther Huebler / githubweb
694. make cam7 physics directory; allow 32 level cam7; up wallclock limits — eaton / githubweb
695. Making num_draw_points in fill_holes a constant. We were already using this value as a constant everywhere, but passing a constant by argument list makes it difficult/impossible for a compiler to optimize using that constant, unless it does inlining. Now, rather than passing the constant num_hf_draw_points (or sometimes a hardcoded 2) we just use num_hf_draw_points directly from constants_clubb. This massively improves the performance of a loop in fill holes when using nvhpc+omp, which was the motivation for this, but should also improve the performance on CPUs. Everything is BFB. — Gunther Huebler / githubweb
696. I am committing code that effectively ignores the values of certain — bmg2 / githubweb
697. Revert to support UWM build structure — katec / githubweb
698. I am moving the advance_xm_wpxp setting of xm(1) = xm(2) from the — bmg2 / githubweb
699. implement geometric hght function; set interface and mid-layer heights — fvitt / githubweb
700. some cleanup — fvitt / githubweb
701. Hanli's fix for DTVKE — fvitt / githubweb
702. Adding extra exclamation to acc statement to comment it out. — Gunther Huebler / githubweb
703. Update Externals_CAM to point to my new atmos_phys branch - will need to redirect this to the tagged version — jet / githubweb
704. increase wallclock limit — eaton / githubweb
705. start ChangeLog — eaton / githubweb
706. add allocate stat checks; add some comments — eaton / githubweb
707. update ChangeLog — eaton / githubweb
708. gr%zm should be used here instead of gr%zt, since these are — bmg2 / githubweb
709. Thermodynamic-level (zt) values should be used with zt-variable — bmg2 / githubweb
710. Update externals to match cesm2_3_alpha17f — cacraig / githubweb
711. put back in MCT since makefile mods would be required — cacraig / githubweb
712. update documentation — jedwards / githubweb
713. Increase wall clock times — cacraig / githubweb
714. Fixing small GPU bug in advance_xm, also fixing a bug with sclrpthvp that's only detectable when were running 1 column on GPUs. — Gunther Huebler / githubweb
715. PR updates — jet / githubweb
716. revert times back for regression tests to original times — cacraig / githubweb
717. Fixing a bug. Does not change default results. — bmg2 / githubweb
718. ChangeLog for cam6_3_161 — cacraig / githubweb
719. Update externals to match cesm2_3_alpha17f — sunjian / githubweb
720. put back in MCT since makefile mods would be required — sunjian / githubweb
721. Increase wall clock times — sunjian / githubweb
722. revert times back for regression tests to original times — sunjian / githubweb
723. ChangeLog for cam6_3_161 — sunjian / githubweb
724. remove the casper test suites — sunjian / githubweb
725. add GPU test suite on Derecho — sunjian / githubweb
726. replaced L93 ncdata files w/ corrected versions — adamrhster / githubweb
727. Updating PIO version to use a commit more recent than the tag to avoid a bug, see https://github.com/larson-group/cam/pull/171\#discussion_r1608836640 for more detail. — Gunther Huebler / githubweb
728. Adding space to trigger jenkins bin diff tests. — Gunther Huebler / githubweb
729. respond to review comments — eaton / githubweb
730. swithc ERP to ERS test as nvhpc seems to have a bug with openmp — sunjian / githubweb
731. improve performance of rh file write — jedwards / githubweb
732. fix typo in comment — eaton / githubweb
733. fix buildcpp to return configure error messages — eaton / githubweb
734. fix SE specific treatment of subcolumns in check_energy — eaton / githubweb
735. add submodules — jedwards / githubweb
736. update externals, waiting for clm tag — jedwards / githubweb
737. remove manage externals — jedwards / githubweb
738. using clm branch — jedwards / githubweb
739. Squashed '.lib/git-fleximod/' content from commit 94121295 — jedwards / githubweb
740. update hemco external — jedwards / githubweb
741. The variable rc_coef_zm needed to be passed in and saved from — bmg2 / githubweb
742. remove solar_htng_spctrl_scl from cam5/6 aquaplanet use case files — eaton / githubweb
743. change dir name from dadadj to dry_adiabatic_adjust and make sure new name is in Filepath — jet / githubweb
744. update find_root_dir to work with git worktree — jedwards / githubweb
745. return str not Path — jedwards / githubweb
746. Bump to 0.7.5 — jedwards / githubweb
747. Squashed '.lib/git-fleximod/' changes from 94121295..a354b052 — jedwards / githubweb
748. update fv3 interface — jedwards / githubweb
749. update externals — jedwards / githubweb
750. update ctsm external — jedwards / githubweb
751. some fixes when modifying url — jedwards / githubweb
752. Bump to 0.7.6 — jedwards / githubweb
753. remove git-fleximod — jedwards / githubweb
754. update externals — jedwards / githubweb
755. update hemco tag — jedwards / githubweb
756. Update README.md with directions about git-fleximod — cacraig / githubweb
757. Add details to README.md and add script for manage_externals/checkout_externals — cacraig / githubweb
758. Update TGIT test to check for .gitmodules — cacraig / githubweb
759. Making the f in f90 capital for consistency. — Gunther Huebler / githubweb
760. PR update to err message for convergence failure — jet / githubweb
761. fix CLUBB interface bug — pel / githubweb
762. Making the only change required to make clubb run with openacc in cam. — Gunther Huebler / githubweb
763. Update chem_proc tag with one with .gitignore in it — cacraig / githubweb
764. update complex test — jedwards / githubweb
765. update chem_proc external — cacraig / githubweb
766. fix status issue — jedwards / githubweb
767. one more improvement — jedwards / githubweb
768. update tests — jedwards / githubweb
769. fix clubb_l_do_expldiff_rtm_thlm default values — eaton / githubweb
770. start ChangeLog entry — eaton / githubweb
771. fixed dims on movmtn table lookup read — juliob / githubweb
772. Bump to 0.7.7 — jedwards / githubweb
773. update ChangeLog for cam6_3_162 — cacraig / githubweb
774. add optional to status output — jedwards / githubweb
775. remove manage_externals error — jedwards / githubweb
776. fix spelling — jedwards / githubweb
777. add temporary CMEPS tag — eaton / githubweb
778. components/cmeps updated — eaton / githubweb
779. update CICE external — eaton / githubweb
780. Bump to 0.7.8 — jedwards / githubweb
781. Updating externals file to use newer ccs_config, and making a GPU ne5 runscript and accompanying jenkins test. — Gunther Huebler / githubweb
782. Removing comment because it breaks the line break. — Gunther Huebler / githubweb
783. Adding profile source to run script. — Gunther Huebler / githubweb
784. fixes for regression tests — eaton / githubweb
785. fixes for regression tests — eaton / githubweb
786. Fix array bound mismatches — cacraig / githubweb
787. refactor set_wet_to_dry/set_dry_to_wet — eaton / githubweb
788. Ri zm calc (Part 1) - Combine and move call to  calc_brunt_vaisala_freq_sqd (#1154) — noreply / githubweb
789. Ri_zm calc (Part 1.5) - Adjusted signature of diagnose_Lscale_from_tau #1145 (#1155) — noreply / githubweb
790. Adds blank line so that I can note BIT_CHANGING:5df5fcb3d6c51d6af2e8017d270336eefa75ad3e — noreply / githubweb
791. update ChangeLog — eaton / githubweb
792. update CMEPS submodule — eaton / githubweb
793. initialize snapshot outfld fields to 0 in tphysac and tphysbc — jet / githubweb
794. update to cam6_3_162 w git-fleximod — jet / githubweb
795. update fv3 submodule — eaton / githubweb
796. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
797. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
798. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
799. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
800. implement climate chemistry compset — fvitt / githubweb
801. add use case file — fvitt / githubweb
802. Updates for the new external — katec / githubweb
803. Introduce GW namelist options — cacraig / githubweb
804. remove Vmct test — eaton / githubweb
805. udpates for supporting GPU testing — cacraig / githubweb
806. update ChangeLog — eaton / githubweb
807. address review comments — eaton / githubweb
808. dependabot changes and issue #48 — jedwards / githubweb
809. add code of conduct (issue #35) — jedwards / githubweb
810. use poetry update to update poetry.lock file — jedwards / githubweb
811. Bump to 0.7.9 — jedwards / githubweb
812. remove gridded component code from waccmx -- not needed with nuopc mediator — fvitt / githubweb
813. set rxn_rate_sums default for WACCMX-mad — fvitt / githubweb
814. remove zm hist fields from waccmx_ma_2000_cam4 on unstruct grids — fvitt / githubweb
815. add comment — fvitt / githubweb
816. fix the path to fms for fv3 build, remove mct reference — jedwards / githubweb
817. Updating clubb submodule — katec / githubweb
818. add multi-inst test; fix usecase — fvitt / githubweb
819. aerosol wet removal fixes — fvitt / githubweb
820. change HB diffusion in CAM7 to only be active for Ri<0 + stability mods for dycore — pel / githubweb
821. update ChangeLog — pel / githubweb
822. add Changelog — john / githubweb
823. update Changelog for commit — john / githubweb
824. another Changelog update for commit — john / githubweb
825. another Changelog update for commit — john / githubweb
826. No frictional heating in del4 sponge (SE dycore) — pel / githubweb
827. update Changelog — pel / githubweb
828. ChangeLog draft — fvitt / githubweb
829. ChangeLog update — fvitt / githubweb
830. ChangeLog update — fvitt / githubweb
831. address review comments — eaton / githubweb
832. fix misplaced USE_COSP ifdef — eaton / githubweb
833. Final round of initial cleanup — cacraig / githubweb
834. update ChangeLog — eaton / githubweb
835. all pytests passing — jedwards / githubweb
836. Added DOI for ref in gw_movmtn.F90 — juliob / githubweb
837. Minor format change — cacraig / githubweb
838. updates to user rxtns for tagged co; set rxn_rate_sums — fvitt / githubweb
839. update ChangeLog — eaton / githubweb
840. Ri_zm calc (Part 2) - Move the brunt_vaisala smoothing into calc_brunt_vaisala_freq_sqd (#1156) — noreply / githubweb
841. low res IC and izumi test — fvitt / githubweb
842. update ChangeLog — eaton / githubweb
843. set flbc options in use case file, rxn_rate_sums in namelist_defaults — fvitt / githubweb
844. Turn on GW Moving Mountain by default for cam7 runs — cacraig / githubweb
845. initial pbuf water path fields to zero for cloud optics — fvitt / githubweb
846. test_b_update now working — jedwards / githubweb
847. add the new submodule class — jedwards / githubweb
848. add documentation to submodule.py — jedwards / githubweb
849. tests a-d all pass — jedwards / githubweb
850. all pytests now passing — jedwards / githubweb
851. all tests passing, issue #50 fixed — jedwards / githubweb
852. now working with issue #50 — jedwards / githubweb
853. no need to make submodule objects persist — jedwards / githubweb
854. update test list — fvitt / githubweb
855. Bump to 0.8.0 — jedwards / githubweb
856. initialize water paths to zero only on startup runs — fvitt / githubweb
857. update .gitmodules — eaton / githubweb
858. update to share1.1.2 — eaton / githubweb
859. Switch log-gamma call to a Fortran 2008 intrinsic — bdobbins / githubweb
860. update to cmeps1.0.0 — eaton / githubweb
861. better fix for issue with ssh access — jedwards / githubweb
862. submodule diffs — eaton / githubweb
863. Bump to 0.8.1 — jedwards / githubweb
864. remove bfb line for testing — jet / githubweb
865. cam6_4_007: CCPP-ized TJ2016 (#1070) — noreply / githubweb
866. Add missing commit for src/atmos_phys from previous tag — cacraig / githubweb
867. update to fetch tag first — jedwards / githubweb
868. Bump to 0.8.2 — jedwards / githubweb
869. Update atmos_phys submodule for some reason — katec / githubweb
870. include megan emissions settings — fvitt / githubweb
871. ChangeLog for cam6_4_008 — cacraig / githubweb
872. Spack updates (#173) — noreply / githubweb
873. Making changes to jenkins tests to get running with new system and new Makefile changes. Also setting run_scam debug back to true by default. — Gunther Huebler / githubweb
874. Renaming tests to make clear which uses debugging and which doesnt. Intel-oneapi currently doesn't work with debugging, see https://github.com/larson-group/sys_admin/issues/829\#issuecomment-2212729099 — Gunther Huebler / githubweb
875. The bin diff tests need to be run on carson because that's where we store the test config files that we use to store the results. — Gunther Huebler / githubweb
876. The module loading is handled by the ccs_config code, so we don't need module commands in jenkinsfiles. Also loading intel-oneapi-mkl for intel builds. — Gunther Huebler / githubweb
877. include transient solar input file — fvitt / githubweb
878. generalized aerosol fluxes to surface with bulk dust rebin — fvitt / githubweb
879. update cam to match atmos_phys changes in dadadj (return heating rate in ptend%s) — jet / githubweb
880. Updated ChangeLog in advance of cam6_4_009 tag — bdobbins / githubweb
881. Cleanup changes due to code review — cacraig / githubweb
882. update directories — cacraig / githubweb
883. This code in adj_low_res_nu was using the ghost point when — bmg2 / githubweb
884. Add GPU tests on derecho — cacraig / githubweb
885. add allocate error checks — fvitt / githubweb
886. update submodules to cesm3_0_alpha02a — eaton / githubweb
887. update submodule directories — eaton / githubweb
888. start ChangeLog entry — eaton / githubweb
889. I am updating the SILHS code that calculates k_lh_start to work — bmg2 / githubweb
890. additional review comments addressed — cacraig / githubweb
891. Add comment for clubb_intr — cacraig / githubweb
892. update ChangeLog — eaton / githubweb
893. update ChangeLog — eaton / githubweb
894. update externals — cacraig / githubweb
895. addressed CS and CS1 variables and outputs — juliob / githubweb
896. Change index variables to be integers — cacraig / githubweb
897. I am committing changes to stats output for cloud_cover, rcm_in_layer, — bmg2 / githubweb
898. There were furhter issues found with the k_lh_start code. — bmg2 / githubweb
899. Ri_zm calc (Part 3) - Moving calculations for Ri_zm out of diagnose_Lscale_from_taus (#1157) — noreply / githubweb
900. In my previous commit, I changed the domain of the maxloc commands — bmg2 / githubweb
901. This commit brings the stats output from the all cases run with — bmg2 / githubweb
902. Use CAM4 BAM dust sizes; pass in aero_props from aero_model; misc cleanup — fvitt / githubweb
903. Final ChangeLog for cam6_4_010 — cacraig / githubweb
904. Change CAM7 runs to use CLM60 — cacraig / githubweb
905. Add FHIST_BDRD test to prealpha — cacraig / githubweb
906. Revert back testlist — cacraig / githubweb
907. improve checks on number and mass fluxes to avoid divide by zero — fvitt / githubweb
908. ChangeLog for cam6_4_011 — cacraig / githubweb
909. Committing a change that will initialize this set of variables — bmg2 / githubweb
910. add src/atmos_phys — jet / githubweb
911. use CLM60 in the new FCts4MTHIST compset — fvitt / githubweb
912. ChangeLog draft — fvitt / githubweb
913. Making a change to the l_C2_cloud_frac option with advance_xp2_xpyp. — bmg2 / githubweb
914. Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175 — Gunther Huebler / githubweb
915. ChangeLog update — fvitt / githubweb
916. ChangeLog draft — fvitt / githubweb
917. ChangeLog update — fvitt / githubweb
918. ChangeLog draft — fvitt / githubweb
919. ChangeLog update — fvitt / githubweb
920. revert #1043; update ChangeLog — eaton / githubweb
921. update ChangeLog — eaton / githubweb
922. dz fix in convproc — fvitt / githubweb
923. mods to RRTMGP for MT configs — eaton / githubweb
924. update HEMCO in .gitmodules; start ChangeLog entry — eaton / githubweb
925. update ChangeLog — eaton / githubweb
926. update ChangeLog — eaton / githubweb
927. update git-fleximod to 8.4 and add fleximod-test workflow — courtneyp / githubweb
928. fix cice url in .gitmodules — courtneyp / githubweb
929. remove variable initialization, not necessary for bfb — jet / githubweb
930. update gitmodules for new atmospheric_physics tag — jet / githubweb
931. Addressing first review comments — katec / githubweb
932. fix #1087 and #1103 — eaton / githubweb
933. A few more review comments — katec / githubweb
934. Bug fixes — katec / githubweb
935. update ChangeLog — eaton / githubweb
936. Update ChangeLog template to include nvhpc tests on Derecho — katec / githubweb
937. add changelog — courtneyp / githubweb
938. Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175 — Gunther Huebler / githubweb
939. Fixing bugs that are only caught when not outputting w_[up/down]_in_cloud stats or if l_host_applies_sfc_fluxes=.true. The l_host_applies_sfc_fluxes=.true. isn't testable (at least not in clubb_standalone), and I just caught that visually. The cloudy_updraft_frac and cloudy_downdraft_frac fields not being set were only noticable in cam, because we always run with iw_up_in_cloud>0 and iw_down_in_cloud>0 to output stats. — Gunther Huebler / githubweb
940. Bug fix for runs where CLUBB_SGS is not defined — katec / githubweb
941. Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test. — Gunther Huebler / githubweb
942. remove ndep stream from aquaplanet and simple model runs — eaton / githubweb
943. cycle forcings over appropriate year — fvitt / githubweb
944. PR updates: comments,typo, and replace hard coded length with shr_kind_cl — john / githubweb
945. remove drydep_srf_file for aquap runs on unstructured grids — eaton / githubweb
946. tweak a comment — fvitt / githubweb
947. Added zt2zm2zt-smoothing to remove noise in MPACE_B winds (#1161) — noreply / githubweb
948. Moving PosInf to clubb_model_settings.F90 — Gunther Huebler / githubweb
949. Update to new new new CLUBB external (_gpufix_PosInf) and new CDEPS — katec / githubweb
950. Update to newest CDEPS tag cdeps1.0.45 — katec / githubweb
951. Update ChangeLog with Derecho test results before machine goes down — katec / githubweb
952. Final updates — katec / githubweb
953. Add compiler name to derecho baseline directories — cacraig / githubweb
954. ChangeLog draft — fvitt / githubweb
955. ChangeLog update — fvitt / githubweb
956. Remove 0.5*timestep logic from call to zm — cacraig / githubweb
957. Update atmos_phys tag — cacraig / githubweb
958. Nightly clubb plots (#1167) — noreply / githubweb
959. Update atmos_phys tag — cacraig / githubweb
960. update ChangeLog and add back # to first line of test_driver.sh — john / githubweb
961. fix date of ChangeLog entry — john / githubweb
962. Nightly clubb plots (#176) — noreply / githubweb
963. Slight cleanup to folder and changing name of jenkins test in script. — Gunther Huebler / githubweb
964. Small bug fix. — Gunther Huebler / githubweb
965. Updating script name — Gunther Huebler / githubweb
966. Remove project checks from issue-closing script. — nusbaume / githubweb
967. Fix comment to remove CAMDEN reference. — nusbaume / githubweb
968. Remove dt from call to ZM convtran — cacraig / githubweb
969. ChangeLog for cam6_4_022 — cacraig / githubweb
970. Clubb ghost exorcism (#1159) — noreply / githubweb
971. Clubb ghost exorcism (#1159) — noreply / githubweb
972. update cice and cdeps for regression failures,Changelog for PR,scam to use coldstart, restore ne30 defaults in pes configure — jet / githubweb
973. Changes that are necessary to the CAM-CLUBB interface for ghostless — bmg2 / githubweb
974. need scam_mandatory to set COLDSTART until CLM scam mods tagged — jet / githubweb
975. update mpace regression test and ChangeLog — jet / githubweb
976. update ChangeLog, pull hvcoord addition — john / githubweb
977. Variable name correction in acc data statement. — Gunther Huebler / githubweb
978. Splitting zeros_vector into versions with nzt or nzm size to match sizes in subroutine. — Gunther Huebler / githubweb
979. Making radf size correct in api and clubb_driver. — Gunther Huebler / githubweb
980. update ChangeLog — eaton / githubweb
981. update ChangeLog — eaton / githubweb
982. add error checking and comments — fvitt / githubweb
983. ChangeLog draft — fvitt / githubweb
984. ChangeLog update — fvitt / githubweb
985. Neglected to remove the 0.5*timestep call from zm_convr_run - done now — cacraig / githubweb
986. ChangeLog update — fvitt / githubweb
987. Add ChangeLog for cam6_4_026 — cacraig / githubweb
988. Ri_zm calc (Part 4) - Implementing calc_Ri_zm (#1160) — noreply / githubweb
989. update ctsm tag to ctsm5.2.027 — fvitt / githubweb
990. ChangeLog draft — fvitt / githubweb
991. Ri zm calc4 (#1168) — noreply / githubweb
992. ChangeLog update — fvitt / githubweb
993. ChangeLog update — fvitt / githubweb
994. PDFP_RTP2_CLUBB is calculated on thermodynamic grid levels and should — bmg2 / githubweb
995. Removing lines from the ERP Jenkins test that (1) no longer work based — bmg2 / githubweb
996. Well, this will probably anger the Grim Reaper, but I have finally — bmg2 / githubweb
997. Removing the SICL from CAM -- the SICL that won't go quietly into the — bmg2 / githubweb
998. Remove old clubb and sihls, update submodules — katec / githubweb
999. Change variables from a1 and a3 to a1_coef and a3_coef — Vince Larson / githubweb
1000. Update copy script to new location — katec / githubweb
1001. Update configure script to match NCAR — katec / githubweb
1002. change loop index to sclr and edsclr for sclr_dim and edsclr_dim (#1173) — noreply / githubweb
1003. Ri zm calc5 (#1175) — noreply / githubweb
1004. Autoupdated CLUBB_core — Cole Pickett / githubweb
1005. Autoupdated SILHS — Cole Pickett / githubweb
1006. Removing duplicate definition of edsclr when CLUBB_CAM is defined. — Gunther Huebler / githubweb
1007. Removing shear_sqd from stat list — Gunther Huebler / githubweb
1008. Autoupdated CLUBB_core — Cole Pickett / githubweb
1009. Ri zm calc6 (#1177) — noreply / githubweb
1010. refactor code to remove compiler warnings for exceeding 100 characters per line and unused variables and parameters (#1179) — noreply / githubweb
1011. refactor code to remove compiler warnings for exceeding 100 characters per line and unused variables and parameters (#1179) — noreply / githubweb
1012. Making scripts work with new merge and making small tweaks to setup script. — Gunther Huebler / githubweb
1013. Changing error detection method. — Gunther Huebler / githubweb
1014. Bug fix — Gunther Huebler / githubweb
1015. reduce compiler warnings (#1180) — noreply / githubweb
1016. reduce compiler warnings (#1180) — noreply / githubweb
1017. Updating gpu run, ne5 seems broken. — Gunther Huebler / githubweb
1018. Bug fixes to jenkins scripts. — Gunther Huebler / githubweb
1019. Bug fixes to jenkins scripts. — Gunther Huebler / githubweb
1020. Reverting accidental changes. — Gunther Huebler / githubweb
1021. Removing the target attributes wherever possible. These are artifacts from when gr and the the stats types were globals, and got naively copied when these were pushed through the call stack. — Gunther Huebler / githubweb
1022. Removing the target attributes wherever possible. These are artifacts from when gr and the the stats types were globals, and got naively copied when these were pushed through the call stack. — Gunther Huebler / githubweb
1023. Remove radf variable from CLUBB call — noreply / githubweb
1024. Remove radf variable from CLUBB call (#180) — noreply / githubweb

#126 (Sep 30, 2024, 6:52:32 PM)

1. test — Gunther Huebler / githubweb

#117 (Sep 30, 2024, 1:06:16 PM)

1. Removing tmp removal for investigation. — Gunther Huebler / githubweb

#109 (Sep 26, 2024, 10:10:44 AM)

1. build script mods to allow se builds — jet / githubweb
2. se scam update — jet / githubweb
3. bfb mods — jet / githubweb
4. se scm updates to cmeps cdeps externals — jet / githubweb
5. scam updates — jet / githubweb
6. external updates for scam_dev 6_3_136 — jet / githubweb
7. missed cice external update for scam — jet / githubweb
8. scam se update — jet / githubweb
9. Initial add of moving mountain GW source — juliob / githubweb
10. start with basics — jedwards / githubweb
11. scam se updates — jet / githubweb
12. module based method, sparse working — jedwards / githubweb
13. now works two ways — jedwards / githubweb
14. complete the tools — jedwards / githubweb
15. worked on outputs — juliob / githubweb
16. worked more on outputs — juliob / githubweb
17. more fixes — jedwards / githubweb
18. submodule needs path not name — jedwards / githubweb
19. improve error checking — jedwards / githubweb
20. add more logging — jedwards / githubweb
21. submodule always usees shell — jedwards / githubweb
22. fix toplevel — jedwards / githubweb
23. fix toplevel — jedwards / githubweb
24. try again — jedwards / githubweb
25. add command line options and support for update — jedwards / githubweb
26. fix new issues — jedwards / githubweb
27. update esmrequired variable — jedwards / githubweb
28. fix recursive issue — jedwards / githubweb
29. add status flag support — jedwards / githubweb
30. add a gitmodules class — jedwards / githubweb
31. now renamed git-fleximod for git interface — jedwards / githubweb
32. clean up and refactor, rename to git-fleximod — jedwards / githubweb
33. add version.txt and .pre-commit-config.yaml — jedwards / githubweb
34. fix issue in update — jedwards / githubweb
35. make action a required subargument to look more like a git subcommand — jedwards / githubweb
36. add documentation — jedwards / githubweb
37. add README and License — jedwards / githubweb
38. update README — jedwards / githubweb
39. trying to improve markdown formatting — jedwards / githubweb
40. trying to improve markdown — jedwards / githubweb
41. trying to improve markdown — jedwards / githubweb
42. trying to improve markdown — jedwards / githubweb
43. add pip setup.py file — jedwards / githubweb
44. bug fix — jedwards / githubweb
45. improve messages — jedwards / githubweb
46. fix some issues in sparse checkout — jedwards / githubweb
47. need to replace ssh with https — jedwards / githubweb
48. change from ssh to https — jedwards / githubweb
49. fix ssh issue — jedwards / githubweb
50. remove debug print statments — jedwards / githubweb
51. fix issue with sparse checkout — jedwards / githubweb
52. more error checking — jedwards / githubweb
53. hack to prevent file corruption — jedwards / githubweb
54. ignore untracked files in submodules — jedwards / githubweb
55. scam clean and updates for derecho — john / githubweb
56. a better solution to the file coruption issue — jedwards / githubweb
57. awkward solution for ssh urls — jedwards / githubweb
58. remove debug print statements — jedwards / githubweb
59. update for distribution — jedwards / githubweb
60. fix error with version flag — jedwards / githubweb
61. update version to 0.1.4 — jedwards / githubweb
62. fix issues with rerunning — jedwards / githubweb
63. update setup.py — jedwards / githubweb
64. update version — jedwards / githubweb
65. geometry works — juliob / githubweb
66. provide more info for status of uninstalled submodules — jedwards / githubweb
67. add test action — jedwards / githubweb
68. bug fix for iopTimeIdx when iop step size is smaller than model timestep — jet / githubweb
69. PR updates for Cheryl and Jim — jet / githubweb
70. fix issue with status — jedwards / githubweb
71. update version — jedwards / githubweb
72. cleaner format for status output, fix for special handling of ssh submodules, fix for 0 length log — jedwards / githubweb
73. check for permission in fleximod.log file — jedwards / githubweb
74. fix issue with ssh submodule checkout — jedwards / githubweb
75. add --force option and cowardly refusal — jedwards / githubweb
76. start at root git dir unless --path flag is used — jedwards / githubweb
77. remove test from visable options — jedwards / githubweb
78. update setup.cfg — negin513 / githubweb
79. updates for setup.py — negin513 / githubweb
80. setup.cfg — negin513 / githubweb
81. pointing to the better solution — negin513 / githubweb
82. minimal changes required — negin513 / githubweb
83. updates to setup.cfg — negin513 / githubweb
84. minor changes — negin513 / githubweb
85. fix syntax and new function name — negin513 / githubweb
86. names were too similar, force needs to be optional — jedwards / githubweb
87. more cleanup — jedwards / githubweb
88. pre-commit cleanup — jedwards / githubweb
89. setup.py builds manpage but doesnt install — jedwards / githubweb
90. update version — jedwards / githubweb
91. update README — jedwards / githubweb
92. add support for fxhash variable in .gitmodules — jedwards / githubweb
93. working on poetry — jedwards / githubweb
94. more poetry and sphinx — jedwards / githubweb
95. Bump to 0.5.0 — jedwards / githubweb
96. reformed to work with poetry — jedwards / githubweb
97. add a simple import test — jedwards / githubweb
98. now includes man pages — jedwards / githubweb
99. update tbump path — jedwards / githubweb
100. Bump to 0.6.0 — jedwards / githubweb
101. fix issue with hyphen — jedwards / githubweb
102. Bump to 0.6.1 — jedwards / githubweb
103. fix issue with sparse checkout dir path — jedwards / githubweb
104. Bump to 0.6.2 — jedwards / githubweb
105. add tests — jedwards / githubweb
106. add pytest to workflow — jedwards / githubweb
107. add pytest to workflow — jedwards / githubweb
108. add pytest fixtures — jedwards / githubweb
109. all working — jedwards / githubweb
110. clean up and combine tests — jedwards / githubweb
111. all tests passing — jedwards / githubweb
112. thought it was working?? — jedwards / githubweb
113. test_complex is still a work in progress — jedwards / githubweb
114. update should checkout if needed — jedwards / githubweb
115. restructure of tests working — jedwards / githubweb
116. all tests are passing and complete — jedwards / githubweb
117. add git user info to tests — jedwards / githubweb
118. remove checkout user option — jedwards / githubweb
119. remove fxhash, putting hash in tag works fine — jedwards / githubweb
120. update version — jedwards / githubweb
121. add translater from manage_externals — jedwards / githubweb
122. check for error with mpi_bcast calls — john / githubweb
123. update README and improve me2flexi — jedwards / githubweb
124. correcting version — jedwards / githubweb
125. Bump to 0.7.0 — jedwards / githubweb
126. code cleanup — jedwards / githubweb
127. PR requested updates — jet / githubweb
128. compile catch/fix for se_single_column_mod — jet / githubweb
129. shorten a few long lines >132 — jet / githubweb
130. bugfix for new minloc replacement for loop with exit — jet / githubweb
131. update ice external tag — jet / githubweb
132. dont need these cdep mods — john / githubweb
133. update cleanup — jedwards / githubweb
134. update cleanup — jedwards / githubweb
135. all tests passing — jedwards / githubweb
136. more cleanup and comments — jedwards / githubweb
137. fix py3.11 issue in gitinterface — jedwards / githubweb
138. explain M flag — jedwards / githubweb
139. fixes issue with ssh access to github (should not be required) — jedwards / githubweb
140. better error handling for not a tag — jedwards / githubweb
141. Bump to 0.7.3 — jedwards / githubweb
142. set python 3.7 as min version requirement — jedwards / githubweb
143. mods to limit COSP top — eaton / githubweb
144. rename fxurl — jedwards / githubweb
145. fix tests on izumi — jedwards / githubweb
146. fix issue in metoflexi — jedwards / githubweb
147. mods to limit COSP top — eaton / githubweb
148. add coordinate trop_pref — eaton / githubweb
149. cosp outputs use new vertical coords as appropriate — eaton / githubweb
150. merge cam/physpkg.F90 changes to cam_dev/physpkg.F90 — eaton / githubweb
151. address compiler messages for cospsimulator_intr — eaton / githubweb
152. fix interface height and pressure inputs — eaton / githubweb
153. add ChangeLog — eaton / githubweb
154. fix for restart with COSP — eaton / githubweb
155. remove old topo file generation tools — eaton / githubweb
156. update ChangeLog — eaton / githubweb
157. PR updates for Jesse — jet / githubweb
158. PR updates — jet / githubweb
159. PR updates — jet / githubweb
160. initial changes — fvitt / githubweb
161. if submodule does not exist add it — jedwards / githubweb
162. create parent if it doesnt exist — jedwards / githubweb
163. Bump to 0.7.4 — jedwards / githubweb
164. change cam_dev to cam7 — eaton / githubweb
165. workaround so that sct works on derecho — jedwards / githubweb
166. Bring in fix for SCT (but breaks derecho test until ccs_config_cesm0.0.99 is brought in — cacraig / githubweb
167. dadadj ccpp updates — john / githubweb
168. use temporary cmep external for testing — eaton / githubweb
169. working version - fallback — juliob / githubweb
170. make cam7 physics directory; allow 32 level cam7; up wallclock limits — eaton / githubweb
171. implement geometric hght function; set interface and mid-layer heights — fvitt / githubweb
172. some cleanup — fvitt / githubweb
173. Hanli's fix for DTVKE — fvitt / githubweb
174. Update Externals_CAM to point to my new atmos_phys branch - will need to redirect this to the tagged version — jet / githubweb
175. increase wallclock limit — eaton / githubweb
176. start ChangeLog — eaton / githubweb
177. add allocate stat checks; add some comments — eaton / githubweb
178. update ChangeLog — eaton / githubweb
179. Update externals to match cesm2_3_alpha17f — cacraig / githubweb
180. put back in MCT since makefile mods would be required — cacraig / githubweb
181. update documentation — jedwards / githubweb
182. Increase wall clock times — cacraig / githubweb
183. PR updates — jet / githubweb
184. revert times back for regression tests to original times — cacraig / githubweb
185. ChangeLog for cam6_3_161 — cacraig / githubweb
186. Update externals to match cesm2_3_alpha17f — sunjian / githubweb
187. put back in MCT since makefile mods would be required — sunjian / githubweb
188. Increase wall clock times — sunjian / githubweb
189. revert times back for regression tests to original times — sunjian / githubweb
190. ChangeLog for cam6_3_161 — sunjian / githubweb
191. remove the casper test suites — sunjian / githubweb
192. add GPU test suite on Derecho — sunjian / githubweb
193. replaced L93 ncdata files w/ corrected versions — adamrhster / githubweb
194. respond to review comments — eaton / githubweb
195. swithc ERP to ERS test as nvhpc seems to have a bug with openmp — sunjian / githubweb
196. improve performance of rh file write — jedwards / githubweb
197. fix typo in comment — eaton / githubweb
198. fix buildcpp to return configure error messages — eaton / githubweb
199. fix SE specific treatment of subcolumns in check_energy — eaton / githubweb
200. add submodules — jedwards / githubweb
201. update externals, waiting for clm tag — jedwards / githubweb
202. remove manage externals — jedwards / githubweb
203. using clm branch — jedwards / githubweb
204. Squashed '.lib/git-fleximod/' content from commit 94121295 — jedwards / githubweb
205. update hemco external — jedwards / githubweb
206. remove solar_htng_spctrl_scl from cam5/6 aquaplanet use case files — eaton / githubweb
207. change dir name from dadadj to dry_adiabatic_adjust and make sure new name is in Filepath — jet / githubweb
208. update find_root_dir to work with git worktree — jedwards / githubweb
209. return str not Path — jedwards / githubweb
210. Bump to 0.7.5 — jedwards / githubweb
211. Squashed '.lib/git-fleximod/' changes from 94121295..a354b052 — jedwards / githubweb
212. update fv3 interface — jedwards / githubweb
213. update externals — jedwards / githubweb
214. update ctsm external — jedwards / githubweb
215. some fixes when modifying url — jedwards / githubweb
216. Bump to 0.7.6 — jedwards / githubweb
217. remove git-fleximod — jedwards / githubweb
218. update externals — jedwards / githubweb
219. update hemco tag — jedwards / githubweb
220. Update README.md with directions about git-fleximod — cacraig / githubweb
221. Add details to README.md and add script for manage_externals/checkout_externals — cacraig / githubweb
222. Update TGIT test to check for .gitmodules — cacraig / githubweb
223. PR update to err message for convergence failure — jet / githubweb
224. fix CLUBB interface bug — pel / githubweb
225. Update chem_proc tag with one with .gitignore in it — cacraig / githubweb
226. update complex test — jedwards / githubweb
227. update chem_proc external — cacraig / githubweb
228. fix status issue — jedwards / githubweb
229. one more improvement — jedwards / githubweb
230. update tests — jedwards / githubweb
231. fix clubb_l_do_expldiff_rtm_thlm default values — eaton / githubweb
232. start ChangeLog entry — eaton / githubweb
233. fixed dims on movmtn table lookup read — juliob / githubweb
234. Bump to 0.7.7 — jedwards / githubweb
235. update ChangeLog for cam6_3_162 — cacraig / githubweb
236. add optional to status output — jedwards / githubweb
237. remove manage_externals error — jedwards / githubweb
238. fix spelling — jedwards / githubweb
239. add temporary CMEPS tag — eaton / githubweb
240. components/cmeps updated — eaton / githubweb
241. update CICE external — eaton / githubweb
242. Bump to 0.7.8 — jedwards / githubweb
243. fixes for regression tests — eaton / githubweb
244. fixes for regression tests — eaton / githubweb
245. Fix array bound mismatches — cacraig / githubweb
246. refactor set_wet_to_dry/set_dry_to_wet — eaton / githubweb
247. update ChangeLog — eaton / githubweb
248. update CMEPS submodule — eaton / githubweb
249. initialize snapshot outfld fields to 0 in tphysac and tphysbc — jet / githubweb
250. update to cam6_3_162 w git-fleximod — jet / githubweb
251. update fv3 submodule — eaton / githubweb
252. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
253. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
254. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
255. Update bld/namelist_files/namelist_defaults_cam.xml — noreply / githubweb
256. implement climate chemistry compset — fvitt / githubweb
257. add use case file — fvitt / githubweb
258. Updates for the new external — katec / githubweb
259. Introduce GW namelist options — cacraig / githubweb
260. remove Vmct test — eaton / githubweb
261. udpates for supporting GPU testing — cacraig / githubweb
262. update ChangeLog — eaton / githubweb
263. address review comments — eaton / githubweb
264. dependabot changes and issue #48 — jedwards / githubweb
265. add code of conduct (issue #35) — jedwards / githubweb
266. use poetry update to update poetry.lock file — jedwards / githubweb
267. Bump to 0.7.9 — jedwards / githubweb
268. remove gridded component code from waccmx -- not needed with nuopc mediator — fvitt / githubweb
269. set rxn_rate_sums default for WACCMX-mad — fvitt / githubweb
270. remove zm hist fields from waccmx_ma_2000_cam4 on unstruct grids — fvitt / githubweb
271. add comment — fvitt / githubweb
272. fix the path to fms for fv3 build, remove mct reference — jedwards / githubweb
273. Updating clubb submodule — katec / githubweb
274. add multi-inst test; fix usecase — fvitt / githubweb
275. aerosol wet removal fixes — fvitt / githubweb
276. change HB diffusion in CAM7 to only be active for Ri<0 + stability mods for dycore — pel / githubweb
277. update ChangeLog — pel / githubweb
278. add Changelog — john / githubweb
279. update Changelog for commit — john / githubweb
280. another Changelog update for commit — john / githubweb
281. another Changelog update for commit — john / githubweb
282. No frictional heating in del4 sponge (SE dycore) — pel / githubweb
283. update Changelog — pel / githubweb
284. ChangeLog draft — fvitt / githubweb
285. ChangeLog update — fvitt / githubweb
286. ChangeLog update — fvitt / githubweb
287. address review comments — eaton / githubweb
288. fix misplaced USE_COSP ifdef — eaton / githubweb
289. Final round of initial cleanup — cacraig / githubweb
290. update ChangeLog — eaton / githubweb
291. all pytests passing — jedwards / githubweb
292. Added DOI for ref in gw_movmtn.F90 — juliob / githubweb
293. Minor format change — cacraig / githubweb
294. updates to user rxtns for tagged co; set rxn_rate_sums — fvitt / githubweb
295. update ChangeLog — eaton / githubweb
296. low res IC and izumi test — fvitt / githubweb
297. update ChangeLog — eaton / githubweb
298. set flbc options in use case file, rxn_rate_sums in namelist_defaults — fvitt / githubweb
299. Turn on GW Moving Mountain by default for cam7 runs — cacraig / githubweb
300. initial pbuf water path fields to zero for cloud optics — fvitt / githubweb
301. test_b_update now working — jedwards / githubweb
302. add the new submodule class — jedwards / githubweb
303. add documentation to submodule.py — jedwards / githubweb
304. tests a-d all pass — jedwards / githubweb
305. all pytests now passing — jedwards / githubweb
306. all tests passing, issue #50 fixed — jedwards / githubweb
307. now working with issue #50 — jedwards / githubweb
308. no need to make submodule objects persist — jedwards / githubweb
309. update test list — fvitt / githubweb
310. Bump to 0.8.0 — jedwards / githubweb
311. initialize water paths to zero only on startup runs — fvitt / githubweb
312. update .gitmodules — eaton / githubweb
313. update to share1.1.2 — eaton / githubweb
314. Switch log-gamma call to a Fortran 2008 intrinsic — bdobbins / githubweb
315. update to cmeps1.0.0 — eaton / githubweb
316. better fix for issue with ssh access — jedwards / githubweb
317. submodule diffs — eaton / githubweb
318. Bump to 0.8.1 — jedwards / githubweb
319. remove bfb line for testing — jet / githubweb
320. cam6_4_007: CCPP-ized TJ2016 (#1070) — noreply / githubweb
321. Add missing commit for src/atmos_phys from previous tag — cacraig / githubweb
322. update to fetch tag first — jedwards / githubweb
323. Bump to 0.8.2 — jedwards / githubweb
324. Update atmos_phys submodule for some reason — katec / githubweb
325. include megan emissions settings — fvitt / githubweb
326. ChangeLog for cam6_4_008 — cacraig / githubweb
327. include transient solar input file — fvitt / githubweb
328. generalized aerosol fluxes to surface with bulk dust rebin — fvitt / githubweb
329. update cam to match atmos_phys changes in dadadj (return heating rate in ptend%s) — jet / githubweb
330. Updated ChangeLog in advance of cam6_4_009 tag — bdobbins / githubweb
331. Cleanup changes due to code review — cacraig / githubweb
332. update directories — cacraig / githubweb
333. Add GPU tests on derecho — cacraig / githubweb
334. add allocate error checks — fvitt / githubweb
335. update submodules to cesm3_0_alpha02a — eaton / githubweb
336. update submodule directories — eaton / githubweb
337. start ChangeLog entry — eaton / githubweb
338. additional review comments addressed — cacraig / githubweb
339. Add comment for clubb_intr — cacraig / githubweb
340. update ChangeLog — eaton / githubweb
341. update ChangeLog — eaton / githubweb
342. update externals — cacraig / githubweb
343. addressed CS and CS1 variables and outputs — juliob / githubweb
344. Change index variables to be integers — cacraig / githubweb
345. Use CAM4 BAM dust sizes; pass in aero_props from aero_model; misc cleanup — fvitt / githubweb
346. Final ChangeLog for cam6_4_010 — cacraig / githubweb
347. Change CAM7 runs to use CLM60 — cacraig / githubweb
348. Add FHIST_BDRD test to prealpha — cacraig / githubweb
349. Revert back testlist — cacraig / githubweb
350. improve checks on number and mass fluxes to avoid divide by zero — fvitt / githubweb
351. ChangeLog for cam6_4_011 — cacraig / githubweb
352. add src/atmos_phys — jet / githubweb
353. use CLM60 in the new FCts4MTHIST compset — fvitt / githubweb
354. ChangeLog draft — fvitt / githubweb
355. ChangeLog update — fvitt / githubweb
356. ChangeLog draft — fvitt / githubweb
357. ChangeLog update — fvitt / githubweb
358. ChangeLog draft — fvitt / githubweb
359. ChangeLog update — fvitt / githubweb
360. revert #1043; update ChangeLog — eaton / githubweb
361. update ChangeLog — eaton / githubweb
362. dz fix in convproc — fvitt / githubweb
363. mods to RRTMGP for MT configs — eaton / githubweb
364. update HEMCO in .gitmodules; start ChangeLog entry — eaton / githubweb
365. update ChangeLog — eaton / githubweb
366. update ChangeLog — eaton / githubweb
367. update git-fleximod to 8.4 and add fleximod-test workflow — courtneyp / githubweb
368. fix cice url in .gitmodules — courtneyp / githubweb
369. remove variable initialization, not necessary for bfb — jet / githubweb
370. update gitmodules for new atmospheric_physics tag — jet / githubweb
371. Addressing first review comments — katec / githubweb
372. fix #1087 and #1103 — eaton / githubweb
373. A few more review comments — katec / githubweb
374. Bug fixes — katec / githubweb
375. update ChangeLog — eaton / githubweb
376. Update ChangeLog template to include nvhpc tests on Derecho — katec / githubweb
377. add changelog — courtneyp / githubweb
378. Bug fix for runs where CLUBB_SGS is not defined — katec / githubweb
379. remove ndep stream from aquaplanet and simple model runs — eaton / githubweb
380. cycle forcings over appropriate year — fvitt / githubweb
381. PR updates: comments,typo, and replace hard coded length with shr_kind_cl — john / githubweb
382. remove drydep_srf_file for aquap runs on unstructured grids — eaton / githubweb
383. tweak a comment — fvitt / githubweb
384. Update to new new new CLUBB external (_gpufix_PosInf) and new CDEPS — katec / githubweb
385. Update to newest CDEPS tag cdeps1.0.45 — katec / githubweb
386. Update ChangeLog with Derecho test results before machine goes down — katec / githubweb
387. Final updates — katec / githubweb
388. Add compiler name to derecho baseline directories — cacraig / githubweb
389. ChangeLog draft — fvitt / githubweb
390. ChangeLog update — fvitt / githubweb
391. Remove 0.5*timestep logic from call to zm — cacraig / githubweb
392. Update atmos_phys tag — cacraig / githubweb
393. Update atmos_phys tag — cacraig / githubweb
394. update ChangeLog and add back # to first line of test_driver.sh — john / githubweb
395. fix date of ChangeLog entry — john / githubweb
396. Remove project checks from issue-closing script. — nusbaume / githubweb
397. Fix comment to remove CAMDEN reference. — nusbaume / githubweb
398. Remove dt from call to ZM convtran — cacraig / githubweb
399. ChangeLog for cam6_4_022 — cacraig / githubweb
400. update cice and cdeps for regression failures,Changelog for PR,scam to use coldstart, restore ne30 defaults in pes configure — jet / githubweb
401. need scam_mandatory to set COLDSTART until CLM scam mods tagged — jet / githubweb
402. update mpace regression test and ChangeLog — jet / githubweb
403. update ChangeLog, pull hvcoord addition — john / githubweb
404. update ChangeLog — eaton / githubweb
405. update ChangeLog — eaton / githubweb
406. add error checking and comments — fvitt / githubweb
407. ChangeLog draft — fvitt / githubweb
408. ChangeLog update — fvitt / githubweb
409. Neglected to remove the 0.5*timestep call from zm_convr_run - done now — cacraig / githubweb
410. ChangeLog update — fvitt / githubweb
411. Add ChangeLog for cam6_4_026 — cacraig / githubweb
412. update ctsm tag to ctsm5.2.027 — fvitt / githubweb
413. ChangeLog draft — fvitt / githubweb
414. ChangeLog update — fvitt / githubweb
415. ChangeLog update — fvitt / githubweb
416. Remove old clubb and sihls, update submodules — katec / githubweb
417. Update copy script to new location — katec / githubweb
418. Update configure script to match NCAR — katec / githubweb
419. Autoupdated CLUBB_core — Cole Pickett / githubweb
420. Autoupdated SILHS — Cole Pickett / githubweb
421. Autoupdated CLUBB_core — Cole Pickett / githubweb
422. Making scripts work with new merge and making small tweaks to setup script. — Gunther Huebler / githubweb
423. Changing error detection method. — Gunther Huebler / githubweb
424. Bug fix — Gunther Huebler / githubweb
425. reduce compiler warnings (#1180) — noreply / githubweb
426. reduce compiler warnings (#1180) — noreply / githubweb
427. Updating gpu run, ne5 seems broken. — Gunther Huebler / githubweb
428. Bug fixes to jenkins scripts. — Gunther Huebler / githubweb
429. Bug fixes to jenkins scripts. — Gunther Huebler / githubweb
430. Reverting accidental changes. — Gunther Huebler / githubweb
431. Removing the target attributes wherever possible. These are artifacts from when gr and the the stats types were globals, and got naively copied when these were pushed through the call stack. — Gunther Huebler / githubweb
432. Removing the target attributes wherever possible. These are artifacts from when gr and the the stats types were globals, and got naively copied when these were pushed through the call stack. — Gunther Huebler / githubweb
433. remove radf from function call to CLUBB — 0-freundlich-adenin / githubweb
434. remove radf from clubb files — 0-freundlich-adenin / githubweb

#100 (Sep 24, 2024, 11:26:12 PM)

1. Bug fixes to jenkins scripts. — Gunther Huebler / githubweb

#94 (Sep 24, 2024, 8:36:09 PM)

1. Updating gpu run, ne5 seems broken. — Gunther Huebler / githubweb
2. Bug fixes to jenkins scripts. — Gunther Huebler / githubweb

#90 (Sep 24, 2024, 1:46:08 PM)

1. Bug fix — Gunther Huebler / githubweb

#88 (Aug 17, 2024, 6:47:17 PM)

1. Update to file structure. — Gunther Huebler / githubweb

#86 (Aug 13, 2024, 8:08:11 PM)

1. Test — Gunther Huebler / githubweb

#85 (Aug 13, 2024, 7:24:06 PM)

1. Test — Gunther Huebler / githubweb

#84 (Aug 13, 2024, 5:40:28 PM)

1. Adding force remove of clubb to prevent folder exists errors. — Gunther Huebler / githubweb

#83 (Aug 13, 2024, 5:11:56 PM)

1. Fixing path — Gunther Huebler / githubweb

#81 (Aug 13, 2024, 4:41:32 PM)

1. Adding robustness — Gunther Huebler / githubweb

#80 (Aug 13, 2024, 4:37:22 PM)

1. Test — Gunther Huebler / githubweb

#79 (Aug 13, 2024, 4:30:24 PM)

1. Rico doesn't work? — Gunther Huebler / githubweb

#76 (Oct 17, 2023, 2:03:40 PM)

1. Update cam_profile_plotter_multicol.py — noreply / githubweb
2. Update user_nl_cam — noreply / githubweb
3. Update run_scam.bash — noreply / githubweb
4. Update run_cesm_uwm.sh — noreply / githubweb
5. Update run_cesm_uwm_coarse_res.sh — noreply / githubweb
6. Update run_cesm_uwm_coarse_res_gpu_no_silhs.sh — noreply / githubweb
7. Update run_cesm_uwm_coarse_res_r8029_flags.sh — noreply / githubweb

#73 (Jul 3, 2023, 3:37:25 PM)

1. Update namelist_definition.xml — noreply / githubweb

#59 (Jun 21, 2022, 12:06:08 PM)

1. checking mem limits — cernikt / githubweb

#55 (Jun 17, 2022, 3:24:21 PM)

1. testing mem limit — cernikt / githubweb

#52 (Jun 16, 2022, 2:44:00 PM)

1. Pushing loop into fill_holes. — 37674341+huebleruwm / githubweb
2. Forgot small change. — 37674341+huebleruwm / githubweb

#45 (Jun 13, 2022, 3:04:39 PM)

1. Changing the cam_global_ERP_Ln9_gfortran_test jenkins test to specify the computer when configuring. — pbroels / githubweb
2. The big grid change. Converting gr from being an array of types containing 1D arrays, to a type containing 2D arrays. All cases BFB, cam multicolumn+silhs BFB, and cam multicolumn (no silhs) with backwards compatible settings BFB. — 37674341+huebleruwm / githubweb
3. The big grid change. Converting gr from being an array of types containing 1D arrays, to a type containing 2D arrays. All cases BFB, cam multicolumn+silhs BFB, and cam multicolumn (no silhs) with backwards compatible settings BFB. — 37674341+huebleruwm / githubweb
4. Making compatible with latest clubb change. update_xp2_mc will be broken by this, but all we need to do to fix it is push the column loop into it. — Gunther Huebler / githubweb
5. Removing the zt2zm interface from clubb_api and making the api calls just redirect to the grid class interface for it. — 37674341+huebleruwm / githubweb
6. Pushing column loop into mean advection procedures. — 37674341+huebleruwm / githubweb
7. Little loop push — 37674341+huebleruwm / githubweb
8. Moving above/below index of grid weights to last dimension. — 37674341+huebleruwm / githubweb

#44 (Jun 9, 2022, 9:20:38 AM)

1. Making silhs use the new 2D version of setup_grid. This also inadvertently fixes a bug added in commit c816bcbd4bb8b8cfa89aa9c0f976ee799cb795e2. The issue was that we used pver when we wanted pverp. — Gunther Huebler / githubweb
2. Lots of small loop pushes — 37674341+huebleruwm / githubweb
3. Small bug fix. This was not a bit changing bug, but could cause crashes if we compile with floating point trapping in a multicolumn run. — 37674341+huebleruwm / githubweb
4. Small refactoring to mfl_xm_lhs, just removing need to pass in gr. — 37674341+huebleruwm / githubweb
5. Final loop pushes needed before the grid change. — 37674341+huebleruwm / githubweb
6. Replacing use of gr with nz — 37674341+huebleruwm / githubweb
7. Replacing use of gr with nz — 37674341+huebleruwm / githubweb
8. Changing NETCDF path in jenkins test command. — pbroels / githubweb
9. Modifying shell commands to be the more recognized version. |& should be understood by bash version >= 3.2.25 but that does not seem to be the case, so we're reverting it to the equivalent 2>&1 | — Gunther Huebler / githubweb
10. Updating compiler config file — Gunther Huebler / githubweb

#42 (Jun 7, 2022, 1:41:06 PM)

1. Moving stats call for uprcp and vprcp to after they are calculated. This fixes the silhs restart test. But does not seem to fix the E3SM or CAM tests that are still failing. — Gunther Huebler / githubweb
2. Changing wp2thvp, rtpthvp, thlpthvp, and cloud_frac to have an — bmg2 / githubweb
3. When the PDF is in the "post" position, a handful of PDF parameters — bmg2 / githubweb
4. Changing rcm to be global in pbuf, so that it can be saved to the restart file. This appears to fix the cam_global_regression test. larson-group/sys_admin#763 — Gunther Huebler / githubweb
5. Cleaning up some pdf_param related code. — Gunther Huebler / githubweb
6. Adding 2D version of zt2zm and zm2zt to clubb_api — Gunther Huebler / githubweb
7. Making clubb_intr use 2D versions of zm2zt and zt2zm. larson-group/cam#972 — Gunther Huebler / githubweb
8. Fixing bug in error code printing. And clubb now handles a range of latitudes and longitudes, so the error print out must reflect that. larson-group/clubb#972 — Gunther Huebler / githubweb
9. Changing cam_global_regression_gfortran_test to cam_global_ERP_Ln9_gfortran_test. — pbroels / githubweb
10. Pushing loop into solve_xm_wpxp_with_single_lhs (#986) — noreply / githubweb
11. Adding backwards compatibility parameters to runscript. larson-group/cam#984 — Gunther Huebler / githubweb
12. Refactoring to remove need for global stats scratch variables. (#988) — noreply / githubweb
13. Gunthers branch (#989) — noreply / githubweb
14. Fixing small bug that breaks runs with scalars. — Gunther Huebler / githubweb
15. Adds a blank line in order to note that — noreply / githubweb
16. Implementations of smooth min, max and heaviside function. Added G-Unit tests — 68997723+JanGrn / githubweb
17. Bug fixes to get head of clubb working with CAM — katec / githubweb
18. Making subcol_silhs not use clubb_intr as much. larson-group/cam#145 — Gunther Huebler / githubweb
19. Making setup_pdf_parameters accept ngrdcols size arrays of stats and grid types. — Gunther Huebler / githubweb
20. Making setup_pdf_parameters accept ngrdcols size arrays of stats and grid types. This is BIT_CHANGING for Ncnm and precip_frac since this was being done incorrectly before. larson-group/cam#129 — Gunther Huebler / githubweb
21. Forgot two small changes. larson-group/cam#129 — Gunther Huebler / githubweb
22. Making precip fracs allocate the proper number of columns. This allows us to finally remove all the data copies in setup_pdf_parameters. larson-group/cam#129 — Gunther Huebler / githubweb
23. Removing need for data copies. larson-group/cam#129 — Gunther Huebler / githubweb
24. Changing column loop index from j to i. larson-group/cam#129 — Gunther Huebler / githubweb
25. Set sclr_dim back to zero and removed parenthesis from advance_clubb_core call — katec / githubweb
26. Making compatible with latest clubb change. — Gunther Huebler / githubweb
27. Removing data copies that we don't need anymore. This still runs correctly on GPUs. — 37674341+huebleruwm / githubweb
28. Making clip_transform_silhs_output use an array of gr. This is how it should have been once the column loop was pushed down into it, but at the time clubb was using gr through a use statement making that not possible. — 37674341+huebleruwm / githubweb
29. No more need for these data copies anymore now that pdf_params is allocated with ngrdcol rather than pcols. — 37674341+huebleruwm / githubweb
30. Removing unused sclr_tol declaration. larson-group/cam#145 — Gunther Huebler / githubweb
31. Changed ifdefs so code builds when CLUBB_SGS is false — katec / githubweb
32. BIT_CHANGING:7e8ad492b0e42efda4bc0e45f96ff6471d702c2e — noreply / githubweb
33. Adds a blank line to trigger git merge with E3SM — noreply / githubweb
34. This should fix the problem Kate is experiencing. The bug is only exposed when using multiple threads, and this is a workaround, we should still remove the grid setup functionality from setup_clubb_core. I wasn't able to get the run to finish since cam also crashes with multiple threads due to clubb stats, but it get passed the grid allocation thread error. — Gunther Huebler / githubweb
35. Removes a blank line in order to trigger merge with E3SM — noreply / githubweb
36. Pushing column loop into xm_wpxp_clipping_and_stats and monotonic_turbulent_flux_limit. This essentially completes advance_xm_wpxp for now. larson-group/clubb#972 — 37674341+huebleruwm / githubweb
37. Replacing the i loop iterator for scalars with sclr. — 37674341+huebleruwm / githubweb
38. Pushing loop into advance_xp2_wpxp. — 37674341+huebleruwm / githubweb
39. Moving the lhs_dp1 calculation to outside of xp2_xpyp_lhs. This gives us more flexibility, since we want to pass lhs_dp1 into xp2_xpyp_implicit_stats. — 37674341+huebleruwm / githubweb
40. Moving the lmm_stepping and stats calls to immediately after calls to xp2_xpyp_solve. This is because xp2_xpyp_implicit_stats saves things that are saved by scratch variables, and these scratch variables are set by the lhs and rhs setup calls. So for the multiple lhs routine, we need to save the scratch variables immediately after these calls before overwriting them by calling lhs and rhs again for a different variable. Since the stats also saves the variable were solving for, we also have to move the lmm_stepping to before this call. — 37674341+huebleruwm / githubweb
41. Removing need for stats scratch variables by passing lhs terms to save through agument lists. This makes everything better in every way. — 37674341+huebleruwm / githubweb
42. Adding slicing for some lhs arrays being saved in stats. This was causing bit changing in a few lhs terms when run in multicolumn. — 37674341+huebleruwm / githubweb
43. Changing names of dp1 variables for up2 and vp2. Surrounding where they're set to be within a l_stats_samp. — 37674341+huebleruwm / githubweb
44. RESOLVED:7cdd1f8a1e444a6a01168c331f18419d67527785 the differences commit 7cdd1f8 caused were from moving the xp2_xpyp_implicit_stats into the solve routines in advance_xp2_xpyp. This is because the stats scratch variables (that have been removed) were causing us to save the rtpthlp version of lhs_dp1 into the rtp2 and thlp2, but now we are saving the correct ones. I've confirmed that the only differences in the output are rtp2_dp1 and thlp2_dp1. This problem is not present when we solve with a single lhs, but the backwards compatible flag set forces us into the solve with multiple, so the other test did not detect any bit changes. — Gunther Huebler / githubweb
45. I added l_relax_clipping to CLUBB's config flags. — bmg2 / githubweb
46. Added l_enable_relaxed_clipping to the CAM-CLUBB code. — bmg2 / githubweb
47. Added a3_coef_min to the list of CLUBB's tunable parameter and then — bmg2 / githubweb
48. I added CLUBB's new tunable parameter a3_coef_min to the CAM-CLUBB code. — bmg2 / githubweb
49. Adding camClubbCodeCopy.bash to the jenkins directory for testing Clubb changes. larson-group/sys_admin#768 — pbroels / githubweb
50. Added idiot-proofing to print a warning message when l_diag_Lscale_from_tau — bmg2 / githubweb
51. Updating the call to setup_clubb_core_api in accordance with new — bmg2 / githubweb
52. Adding in Jenkinsfile to test and changing file and folder name. — pbroels / githubweb
53. Changing syntax to load and run Jenkinsfile. — pbroels / githubweb
54. Fixing errors in previous change to allow script to work. — pbroels / githubweb
55. Adding in temp arguments for testing. — pbroels / githubweb
56. I added the code for the l_linearize_pbl_winds flag that was originally — bmg2 / githubweb
57. Trying scripted Pipeline syntax rather than Declarative syntax to test loading and running our current pipelines. — pbroels / githubweb
58. Removing incorrect function calls for a Scripted pipeline. — pbroels / githubweb
59. Adding in parameters for full runs. — pbroels / githubweb
60. Added code to interface with the latest version of CLUBB. — bmg2 / githubweb
61. Adding _pert arrays to other advance_clubb_core call. — Gunther Huebler / githubweb
62. Adding in a git clone step to the Cam Clubb Copy test. — pbroels / githubweb
63. Trying out git command rather than checkout for cloning. — pbroels / githubweb
64. Adding correct scm command and removed redundant run commond from end. — pbroels / githubweb
65. Adding space because commit 26b7e8f8d7007f78d655b8fc15045015ce8d4790 fixed the jenkins test that were failing, but did not include the proper resolving messages. RESOLVED:7046396a59f73087323f04b267cd8614ff1653f2 RESOLVED:30559bb00c20ce8a8c21242272f6d16cecb12b45 RESOLVED:970b880d9144efe00ce9d6fa34bcd49a493ac65b RESOLVED:633e158c8e6d5818b39963e6836ef71c1489faf9 RESOLVED:4ae233813e39a8bc7e3b58e600c0f71103fff8b3 — Gunther Huebler / githubweb
66. Gunthers branch (#996) — noreply / githubweb
67. Various simple changes to improve performance. All bit-for-bit. — Gunther Huebler / githubweb
68. Pushing loop into calc_stability_correction. — Gunther Huebler / githubweb
69. Adding in comments to explaining the technical tricks and methods in each jenkins file so it is clear what they do and why they are there. — pbroels / githubweb
70. Small bug fix. — Gunther Huebler / githubweb
71. Another similar small bug fix. — Gunther Huebler / githubweb
72. Gunthers branch (#999) — noreply / githubweb
73. Renamed smth_range to heaviside_smth_range — 68997723+JanGrn / githubweb
74. Added tot_vartn_normlzd statistics. Renamed sclr in advance_helper_module to scalar to be more consistent with clubb naming schemes. — 68997723+JanGrn / githubweb
75. Implemented three further normalized variation stats. Included a (most likely temporary) check because in a few cases, denominator for normalization would be 0. — 68997723+JanGrn / githubweb
76. Changed priorities of total normalized variation stats, included error handling in total normalized variation stats. — 68997723+JanGrn / githubweb
77. Renamed pdf_output_filename. Added grid_level constant to avoid magic numbers in stats_update_var_pt calls. — 68997723+JanGrn / githubweb
78. Gunthers branch 2 (#1002) — noreply / githubweb
79. Bugfix for merge #1000. stderr was not imported in stat_clubb_utilities.F90, causing compilation to fail. — 68997723+JanGrn / githubweb
80. Added ability to apply smooth min max functions in mixing_length.F90 — 68997723+JanGrn / githubweb
81. Updated deprecated documentation of smooth min and max functions in advance_helper_module.F90. https://github.com/larson-group/clubb/issues/965 — 68997723+JanGrn / githubweb
82. Checked whether results really are identical even with round-off when we have l_smooth_min_max=T and smooth_min_max_mag=zero. Next commit rolls some of these changes back for merge into master. https://github.com/larson-group/clubb/issues/965 — 68997723+JanGrn / githubweb
83. Added test cases to smooth_min_max_tests.F90 and updated documentation. — 68997723+JanGrn / githubweb
84. Constructing rcm within SILHS (as rcm_pdf) (#1011) — noreply / githubweb
85. Constructing rcm within SILHS (as rcm_pdf) (#1011) — noreply / githubweb
86. Updating for changes to CLUBB.  See https://github.com/larson-group/clubb/commit/e4f125ba067ba8083f917e0e06b6b2398483d3e4. — benjamin.andrew.stephens / githubweb
87. Almost final loop pushes (#1012) — noreply / githubweb
88. Making pdf_implicit_coefs_terms a type containing 2D arrays. (#1014) — noreply / githubweb
89. Making compatible with latest clubb change. — Gunther Huebler / githubweb
90. This commit is not bit changing — noreply / githubweb
91. The G_unit tests never allocated pdf_implicit_coefs_terms. It's unclear to me how these were working before, but it seems that something about making these 2D allocatable arrays exposed the bug. — Gunther Huebler / githubweb
92. Making zt2zm calls with pdf_implicit_coefs_terms use the 2D version. — Gunther Huebler / githubweb
93. Removing setup_grid and setup_parameters functionality from setup_clubb_core. This is beacuse in host models the required grid information may not be known during the setup process, resulting in dummy arguments for setup_clubb_core and the grid and paramters being setup during runtime anyway. Now, in the host models we can call these subroutines immediately after setup_clubb_core to maintain identical functionality (sam, wrf), and in others we can wait to call these until the main timestepping procedure (cam,e3sm). — Gunther Huebler / githubweb
94. Making compatible with latest clubb change. — Gunther Huebler / githubweb
95. Making 2D versions of setup_grid and setup_parameters. — Gunther Huebler / githubweb
96. Now using 2D versions of setup_grid and setup_parameters — Gunther Huebler / githubweb
97. Making lmin a scalar again, twas a mistake to make it an array, it can only take on one value. — Gunther Huebler / githubweb
98. Making compatible with latest clubb change. — Gunther Huebler / githubweb
99. Making nu_vert_res_dep a type containing arrays, as opposed to being an array of types. — Gunther Huebler / githubweb
100. Making compatible with latest clubb change. — Gunther Huebler / githubweb

#37 (Feb 7, 2022, 4:20:02 PM)

1. Insert print about overwriting default flags with namelist values — noreply / githubweb
2. Insert print about overwriting default parameters with namelist values — noreply / githubweb
3. Making call to setup_grid use new api version. larson-group/clubb#972 — Gunther Huebler / githubweb
4. Making api version of setup_grid. larson-group/clubb#972 — Gunther Huebler / githubweb
5. Breaking up column loop some more. larson-group/clubb#972 — Gunther Huebler / githubweb
6. Making some paramters_silhs variables available from the silhs api — Gunther Huebler / githubweb
7. Comment out setting of fatal error — noreply / githubweb
8. Big column loop is now gone entirely. Replaced by fast small loops. larson-group/clubb#972 — Gunther Huebler / githubweb
9. This should be BIT_CHANGING, but only because the value of Cx_min should change in the netcdf file. This will not be answer changing. — Gunther Huebler / githubweb
10. Changing the value of C_invrs_tau_shear from 0.02 to 0.15. — bmg2 / githubweb
11. Avoiding stats call for variables that are not set when l_diag_Lscale_from_tau is not true. — Gunther Huebler / githubweb
12. Updated cam to reflect the changes in the clubb driver api — noreply / githubweb
13. Adjusting the value of C_invrs_tau_shear from 0.15 to 0.16 so that — bmg2 / githubweb
14. Add l_smooth_Heaviside_tau_wpxp to smooth discontinuity in invrs_tau_wpxp_zm — noreply / githubweb
15. Pushing column loop into advance_clubb_core, and adding interface for it so that we will not need to update any host models. Everything is bit-for-bit, testing all standalone cases and our cam_coarse res run. larson-group/clubb#972 — Gunther Huebler / githubweb
16. Making cam use the multicolumn interface for advance_clubb_core. Everything bit-for-bit. larson-group/clubb#972 — Gunther Huebler / githubweb
17. Adding l_stats check around stats stuff. This fixes the crashing when stats is disabled. larson-group/clubb#972 — Gunther Huebler / githubweb
18. Making single and multi column versions of advance clubb core available through clubb_api. larson-group/clubb#972 — Gunther Huebler / githubweb
19. Breaking up column loop in advance_clubb_core. larson-group/clubb#972 — Gunther Huebler / githubweb
20. Pushing loop into pdf_closure and breaking it up. larson-group/clubb#972 — Gunther Huebler / githubweb
21. I changed C_invrs_tau_N2_wp2 from 0.1 to 0.2 to help stop turbulence — bmg2 / githubweb
22. Pushing loop into pdf_closure_module and breaking it up. larson-group/clubb#972 — Gunther Huebler / githubweb
23. Making the good version of pdf_params used most places. The bad version is the single column version. larson-group/clubb#972 — Gunther Huebler / githubweb
24. Rather than allocating pdf_params with pcols grid columns, we should use ncol. Which is what this commit does. We should do this same thing for all the other arrays too, but this change was required to move forward with our loop pushing. larson-group/clubb#972 — Gunther Huebler / githubweb
25. Making a commit that officially places the call to the PDF in the "post" — bmg2 / githubweb
26. Pushing loops into all relevent lowest level routines in pdf_closure. larson-group/clubb#972 — Gunther Huebler / githubweb
27. Forgot an & symbol. — Gunther Huebler / githubweb
28. We need to initialize our local pdf_implicit_coefs_terms_zm in certain pdf types. We also don't need to zero out pdf_implicit_coefs_terms arrays, since that's done in the initialization. This should fix segfaults when l_call_pdf_closure_twice=.True. larson-group/clubb#972 — Gunther Huebler / githubweb
29. I am updating ice_supersat_frac to be an intent(inout) variable for — bmg2 / githubweb
30. Making compatible with latest clubb change. — Gunther Huebler / githubweb
31. Intializing sigma_sqd_w_zt when not using ADG1. larson-group/clubb#972 — Gunther Huebler / githubweb
32. Setting up ice_supersat_frac to be saved from one timestep to the next — bmg2 / githubweb
33. Fixing bug, we were not initializng pdf_params for all columns. larson-group/clubb#972 — Gunther Huebler / githubweb
34. Improving config flag setup process and adding run script using r8029 flag set. larson-group/clubb#984 — Gunther Huebler / githubweb
35. Adding nightly test script for the r8029 flag version of the coarse res run. larson-group/clubb#972 — Gunther Huebler / githubweb
36. Updating scripts — Gunther Huebler / githubweb
37. Fixing scripts, I updated the wrong one. — Gunther Huebler / githubweb
38. Pushing column index into zm2zt and zt2zm. larson-group/clubb#972 — Gunther Huebler / githubweb
39. Pushing column index into Skx_func and making it a subroutine. larson-group/clubb#972 — Gunther Huebler / githubweb
40. A variety of small loop pushing. larson-group/clubb#972 — Gunther Huebler / githubweb
41. Fixed small bug that slipped through because the G_unit tests use nz=1. — Gunther Huebler / githubweb
42. Pushing column index into mixing length routines, not all the way down for the non-tau based calculation. larson-group/clubb#972 — Gunther Huebler / githubweb
43. I added a subroutine that prints that values of all PDF parameters in — bmg2 / githubweb
44. Small changes and a loop push. larson-group/clubb#972 — Gunther Huebler / githubweb
45. Pushing loop into advance_xm_wpxp. larson-group/clubb#972 — Gunther Huebler / githubweb
46. Making the G_unit test use a dummy column index. This makes it so we don't need an interface for compute_sigma_sqd_w since now we only use it with 2 dimensions. This is just nicer. larson-group/clubb#972 — Gunther Huebler / githubweb
47. Breaking up column loop in advance_xm_wpxp_module. larson-group/clubb#972 — Gunther Huebler / githubweb
48. Pushing column loop into local functions. larson-group/clubb#972 — Gunther Huebler / githubweb
49. Adding in functionality for displaying log output into post step. — pbroels / githubweb
50. Fixing whitespace issues with the jenkinsfile changes. — pbroels / githubweb

#36 (Jan 10, 2022, 3:35:28 PM)

1. Set `clubb_l_min_xp2_from_corr_wx = T` — noreply / githubweb
2. Remove blank line in order to resolve — noreply / githubweb
3. Updating CLUBB to pass uprcp and vprcp into and out of advance_clubb_core. — bmg2 / githubweb
4. Now that uprcp and vprcp have been passed through advance_clubb_core, — bmg2 / githubweb
5. I am adding more arguments to the argument list for advance_clubb_core — bmg2 / githubweb
6. I am updating clubb_intr.F90 to account for new changes to the call — bmg2 / githubweb
7. Fixed a goof. — Brian Griffin / githubweb

#35 (Dec 21, 2021, 2:42:35 PM)

1. These changes allow you to call the 4 clubb "advance" subroutines in any — Brian Griffin / githubweb
2. Placing the order variables in a nice, convenient place for testing use. — Brian Griffin / githubweb
3. I reordered advance_clubb_core so that the "Advance xp3" (which is a — Brian Griffin / githubweb
4. I am committing the idiot-proofing code that forces l_min_xp2_from_corr_wx — Brian Griffin / githubweb
5. I am indenting the portion of the code where the advance subroutines — Brian Griffin / githubweb
6. Temporarily commenting out the idiot proofing in order to run some tests ... — Brian Griffin / githubweb
7. Now official reinstating the idiot-proofing and turning off the — bmg2 / githubweb
8. I am committing some idiot proofing in regards to the advance — bmg2 / githubweb
9. Upgrading for the latest version of CLUBB. — bmg2 / githubweb

#33 (Dec 15, 2021, 4:36:29 PM)

1. Adding in gfortran 10 fflags that allow carson nightly tests to work. — pbroels / githubweb

#32 (Dec 15, 2021, 3:24:31 PM)

1. I added a blank line in order to test for bit changes. — noreply / githubweb
2. Adding column index to almost all the relevant arrays. larson-group/clubb#972 — Gunther Huebler / githubweb
3. Adding column index to grid variable and breaking up column loop slightly. larson-group/clubb#972 — Gunther Huebler / githubweb
4. Adding column index to stats arrays, and breaking up column loop so that we have a loop perfectly around advance_clubb_core, just sitting there, waiting to be pushed down... larson-group/clubb#972 — Gunther Huebler / githubweb
5. Small bug fix. larson-group/clubb#972 — Gunther Huebler / githubweb

#30 (Dec 6, 2021, 1:16:13 PM)

1. I have passed clubb_params down into advance_xm_wpxp_module.F90. — bmg2 / githubweb
2. See ticket — jan.gruenenwald / githubweb
3. I have passed down CLUBB's tunable parameters into advance_wp2_wp3_module.F90. — bmg2 / githubweb
4. added some documentation in pdf_close_module.f90 and started writing of w_up_in_cloud to disk — jan.gruenenwald / githubweb
5. Updates to separate out C4 and C14 in advance_xp2 module.  This will make it easier to control which invrs_tau_* variable multiplies each term for example. — 59519056+bstephens82 / githubweb
6. Changing the name of dummy_1d variables for clarity. — 59519056+bstephens82 / githubweb
7. I passed down CLUBB's tunable parameters into advance_xp2_xpyp_module.F90 — bmg2 / githubweb
8. Add a blank line to trigger nightly tests. — noreply / githubweb
9. Passing down more of CLUBB's tunable parameters. — bmg2 / githubweb
10. I accidentally removed an important comment in the previous commit. — bmg2 / githubweb
11. Passing down more CLUBB tunable parameters. — bmg2 / githubweb
12. Updating run_scam.bash to work with newest merge from cam_development. larson-group/cam#140 — Gunther Huebler / githubweb
13. More passing down CLUBB parameters ... whoop-de-doo — bmg2 / githubweb
14. Passing down more tunable parameters and removing references to — bmg2 / githubweb
15. Removing line to trigger the nightly tests for all repos. — noreply / githubweb
16. Changing jenkinsfiles and thier diectory to reflect changes to test name. larson-group/sys_admin#735 — pbroels / githubweb
17. See respective messages on the issue 958 on date 10/12/2021 — jan.gruenenwald / githubweb
18. Handling the abomination that is lmin. — bmg2 / githubweb
19. Commented out the k=1 boundary conditions in diffusion_zm_lhs and diffusion_zt_lhs, since these are not currently fed into the final LHS matrix.  I included comments to describe why this was done.  Results are b4b. — benjamin.andrew.stephens / githubweb
20. Add a blank line in order to note that — noreply / githubweb
21. Passing tunable parameters into the new tau code. — bmg2 / githubweb
22. Passed down more parameters. Results are bit-for-bit. — bmg2 / githubweb
23. Passing through more clubb parameters. Bit-for-bit — bmg2 / githubweb
24. Passing down CLUBB's tunable parameters into the setup_pdf_parameters and — bmg2 / githubweb
25. These updates incorporate some of Shixuan Zhang's changes, including: — benjamin.andrew.stephens / githubweb
26. Passing down CLUBB's tunable parameters into the remainder of the — bmg2 / githubweb
27. I passed down the forgotten thlp2_rad_coef tunable parameter. — bmg2 / githubweb
28. Uncommenting diffusion.F90 k=1 lines again to fix Oracle uninit var test.  I've updated the accompanying note to state clearly that the lines have no effect on model output, but I guess we need to keep the lines to avoid uninitialized variables. — benjamin.andrew.stephens / githubweb
29. I am passing down the forgotten parameter, altitude threshold, in — bmg2 / githubweb
30. Updating for changes to CLUBB.  See https://github.com/larson-group/clubb/pull/968. — benjamin.andrew.stephens / githubweb
31. Adding code wrapped in a flag (l_use_tke_in_K_dfsn) to use u_i'u_i' in the wp2 and wp3 eddy diffusion terms, instead of just wp2 or wp3.  Relevant to CLUBB issue #920. — 59519056+bstephens82 / githubweb
32. Updates as requested to the l_use_tke_in_K_dfsn code: — 59519056+bstephens82 / githubweb
33. I am committing the final stage of the "pass-down params" project. — bmg2 / githubweb
34. I am committing the final stage of the "pass-down params" project. — bmg2 / githubweb
35. Adding an option to use invrs_tau_N2_iso for C4 terms.  The same invrs_tau had been used for C4 and C14 terms, so some adjustments had to be made to separate them out (this was started with an earlier commit: https://github.com/larson-group/clubb/commit/ef3be1b1378bcd1a447f3866c9f88f8cc4764233).  The flag is currently set to false so results will be b4b. — 59519056+bstephens82 / githubweb
36. Renaming invrs_tau_zt and invrs_tauw3t to "invrs_tau_wp3_zt" in advance_wp2_wp3 to avoid confusion.  This variable is only used for the wp3 C8 term, so one consistent name is simpler, and the name "invrs_tau_zt" is already used by another variable in advance_clubb_core. — 59519056+bstephens82 / githubweb
37. Adding comments for clarity. — 59519056+bstephens82 / githubweb
38. I forgot to add this necessary subroutine call to the clubb API. — bmg2 / githubweb
39. I am updating CAM-CLUBB-SILHS (the clubb_silhs_devel) branch so — Brian Griffin / githubweb
40. Fixing a minor accounting bug related to the changes in https://github.com/larson-group/clubb/commit/987d63de489d2baa09ad6e1538b2c6dbb7551690.  There was some overcounting of the relevant terms. — benjamin.andrew.stephens / githubweb
41. Fixing the SILHS code so that CAM-CLUBB-SILHS compiles and runs again. — bmg2 / githubweb
42. Add blank line to run_scam.bash in order to note that — noreply / githubweb
43. I have turned the nu_vert_res_dep family of variables into a derived — bmg2 / githubweb
44. I am updating clubb_intr.F90 for the new version of CLUBB that — bmg2 / githubweb
45. Added sam file name to DYCOMS_RF02_DO case, fixed the clipping in calc_w_up_in_cloud in pdf_closure_module.f90, and changed long name of w_up_in_cloud in stats_zt_module.f90 — jan.gruenenwald / githubweb
46. Resolved any issues in the pull request. See https://github.com/larson-group/clubb/pull/970 for details — jan.gruenenwald / githubweb
47. Included a check in pdf_closure_module.f90 to check if flag for iw_up_in_cloud is set. Removed iw_up_in_cloud from standard_stats.in to prevent binary diffs in CLUBB output files after merge — jan.gruenenwald / githubweb
48. fixed a typo in pdf_closure_module.f90, line 1284 — jan.gruenenwald / githubweb
49. Remove blank line from run_scam.bash — noreply / githubweb
50. See ticket — 68997723+JanGrn / githubweb
51. added some documentation in pdf_close_module.f90 and started writing of w_up_in_cloud to disk — 68997723+JanGrn / githubweb
52. See respective messages on the issue 958 on date 10/12/2021 — 68997723+JanGrn / githubweb
53. Added sam file name to DYCOMS_RF02_DO case, fixed the clipping in calc_w_up_in_cloud in pdf_closure_module.f90, and changed long name of w_up_in_cloud in stats_zt_module.f90 — 68997723+JanGrn / githubweb
54. Resolved any issues in the pull request. See https://github.com/larson-group/clubb/pull/970 for details — 68997723+JanGrn / githubweb
55. Included a check in pdf_closure_module.f90 to check if flag for iw_up_in_cloud is set. Removed iw_up_in_cloud from standard_stats.in to prevent binary diffs in CLUBB output files after merge — 68997723+JanGrn / githubweb
56. fixed a typo in pdf_closure_module.f90, line 1284 — 68997723+JanGrn / githubweb
57. Passing w_up_in_cloud out of advance_clubb_core — bmg2 / githubweb
58. Updating cam for changes in the call to advance_clubb_core_api — bmg2 / githubweb
59. fixed compiler warning regarding w_up_in_cloud — jan.gruenenwald / githubweb
60. Remove clipping from a3_coef. — noreply / githubweb

#25 (Aug 20, 2021, 2:22:13 PM)

1. For clubb:ticket:770, the Oracle compiler was throwing a floating point exception here. wpxp2 and xp2 were being fed in as Nans. — weberjk / githubweb
2. The new file calc_roots.F90 contains functions that solve for the roots of a — bmg2 / githubweb
3. I tweaked the precipitation fraction code so that the weighted ith PDF component — bmg2 / githubweb
4. For clubb:ticket:740, I added an output for the "sampling fractions" in each category, which are the SILHS approximations of S_j. — raut / githubweb
5. I updated pdf_closure_module.F90 by integrating changes I made in the — bmg2 / githubweb
6. For cam:ticket:36: — raut / githubweb
7. For cam:ticket:36#comment:132, I removed `gr` from the use statement in `setup_grid_heights_api`. — raut / githubweb
8. For clubb:ticket:773, I fixed some unsoundness in our code regarding kinds, specifically in `parameters_model.F90` and `endian.F90`. — raut / githubweb
9. For cam:ticket:41, the change in clubb:r7921 should be applied to the trunk as well. — raut / githubweb
10. For clubb:ticket:775: — raut / githubweb
11. For clubb:ticket:775: — raut / githubweb
12. Misc. code cleanup — raut / githubweb
13. I am updating default CLUBB to use the same hydrometeor PDF parameters that are — bmg2 / githubweb
14. For cam:ticket:50: — raut / githubweb
15. For cam:ticket:52: — raut / githubweb
16. For cam:ticket:52, I added some parameter indices to the API. — raut / githubweb
17. I forgot a parameter! — raut / githubweb
18. For clubb:ticket:753: — raut / githubweb
19. For clubb:ticket:782: — raut / githubweb
20. I forgot a flag. — raut / githubweb
21. For clubb:ticket:782: — raut / githubweb
22. For cam:ticket:55, I added some parameters to CLUBB's API. — raut / githubweb
23. For cam:ticket:55: — raut / githubweb
24. I cleaned up some warnings from the Mac compiler. (build:14977) — raut / githubweb
25. For clubb:ticket:785, I renamed `initvars` to `clubb_params_nl`. — raut / githubweb
26. For clubb:ticket:785: — raut / githubweb
27. For clubb:ticket:779: — raut / githubweb
28. For clubb:ticket:786: — raut / githubweb
29. For clubb:ticket:786: — raut / githubweb
30. For clubb:ticket:782, I added all CLUBB's parameter indices to the API. — raut / githubweb
31. helpful note — raut / githubweb
32. more helpful note — raut / githubweb
33. most helpful note — raut / githubweb
34. For cam:ticket:56: — raut / githubweb
35. While working on cam:ticket:59, I noticed that `tau_N2_zm` is computed twice. I removed one computation. — raut / githubweb
36. Dat crazy indentation, though... — raut / githubweb
37. For cam:ticket:59, I refactored the calculation of `brunt_vaisala_freq` into a subroutine, and renamed it `brunt_vaisala_freq_sqd`. — raut / githubweb
38. For cam:ticket:59: — raut / githubweb
39. For cam:ticket:59: — raut / githubweb
40. For cam:ticket:59: — raut / githubweb
41. For cam:ticket:59, I added a new output for Richardson number. — raut / githubweb
42. For cam:ticket:59: — raut / githubweb
43. Per cam:ticket:59#comment:21, using `T_in_K_zm` in "the formula". — raut / githubweb
44. For cam:ticket:59. — raut / githubweb
45. For cam:ticket:59 I renamed `Richardson_no` to `Richardson_num`. — raut / githubweb
46. For cam:ticket:59, I added kludgy statistical output for `brunt_vaisala_freq_sqd`. — raut / githubweb
47. For cam:ticket:59: — raut / githubweb
48. For cam:ticket:59: — raut / githubweb
49. For cam:ticket:59: — raut / githubweb
50. For cam:ticket:59. — raut / githubweb
51. For cam:ticket:59: — raut / githubweb
52. Apparently, I didn't have to jump through the hoop of declaring a separate profile to use in the `max` statement. — raut / githubweb
53. For cam:ticket:59: — raut / githubweb
54. For cam:ticket:59: — raut / githubweb
55. For cam:ticket:59: — raut / githubweb
56. For clubb:ticket:782: — raut / githubweb
57. For cam:ticket:59: — raut / githubweb
58. For cam:ticket:59: — raut / githubweb
59. For cam:ticket:59: — raut / githubweb
60. For cam:ticket:59: — raut / githubweb
61. For clubb:ticket:782: — raut / githubweb
62. For cam:ticket:59: — raut / githubweb
63. For cam:ticket:59, I fixed bugs in the `l_use_C7_Richardson=T` vertical averaging code: — raut / githubweb
64. I adjusted a comment. — raut / githubweb
65. For clubb:ticket:788: — raut / githubweb
66. For cam:ticket:59: — raut / githubweb
67. For clubb:ticket:788: — raut / githubweb
68. For clubb:ticket:788: — raut / githubweb
69. For clubb:ticket:788: — raut / githubweb
70. For clubb:ticket:788: — raut / githubweb
71. For clubb:ticket:788: — raut / githubweb
72. Renamed C7 to Cx in appropriate places. — raut / githubweb
73. For cam:ticket:59: — raut / githubweb
74. For cam:ticket:59: — raut / githubweb
75. I made it a default to use 0 instead of cloud_frac_min in the B.V. frequency calculation. — raut / githubweb
76. For cam:ticket:67: — raut / githubweb
77. For cam:ticket:67: — raut / githubweb
78. Code improvements. — raut / githubweb
79. Vince noticed that `sat_mixrat_liq` or `sat_mixrat_ice` will be left uninitialized if `sat_ice_ratio == 0` or `sat_ice_ratio == 1`. No more! — raut / githubweb
80. For cam:ticket:32, I made `hydrometp2` `intent(out)` in CLUBB, since the input value is not used. — raut / githubweb
81. Fixed a comment. — raut / githubweb
82. For clubb:ticket:788: — raut / githubweb
83. For clubb:ticket:792: — raut / githubweb
84. For clubb:ticket:792: — raut / githubweb
85. For clubb:ticket:792, I added more initializations for uninitialized variables. — raut / githubweb
86. When l_avg_Lscale is turned on but the plume-centered calculation is disabled, — bmg2 / githubweb
87. For clubb:ticket:792: — raut / githubweb
88. For clubb:ticket:792, I added a new stats output, `rcm_supersat_adj`, to record the degree of rcm adjustment. It is not output by default. This changeset does not change output. — raut / githubweb
89. I renamed RH_postPDF to rel_humidity. — raut / githubweb
90. For clubb:ticket:792. rsat actually should be recomputed here before output, because it will change if `l_rcm_supersat_adj = T`. — raut / githubweb
91. For clubb:ticket:792. I am reusing the `rel_humidity` variable for output, for no particular reason. — raut / githubweb
92. For clubb:ticket:792!!!! I set `l_rcm_supersat_adj = T` by default, in both source code and namelist. — raut / githubweb
93. As requested, I am adding a warning message (debug level 1) when spurious supersaturation is removed. — raut / githubweb
94. Comment. — raut / githubweb
95. For clubb:ticket:788, I added a threadprivate entry for `iwp3_pr3`, which will hopefully resolve the failure of the OpenMP test (build:16010). — raut / githubweb
96. I removed a spurious print statement. — raut / githubweb
97. For cam:ticket:73: — raut / githubweb
98. I am beginning to generalize the sponge damping code so that it can be applied to — bmg2 / githubweb
99. I have added all the coding infrastructure to perform sponge damping (and record — bmg2 / githubweb
100. — Vince Larson / githubweb
101. clubb:ticket:796 — roessle9 / githubweb
102. I added some parameter value checking in subroutine setup_parameters. — bmg2 / githubweb
103. I finally have a standalone version of the new subroutine, generate_pdf_params, — bmg2 / githubweb
104. Some code within advance_clubb_core that is found within CAM_CLUBB preprocessor — bmg2 / githubweb
105. The perturbation Lscale code requires rtm_frz, thlm_frz, and pdf_params_frz to — bmg2 / githubweb
106. I added a missing intent(out) statement. — bmg2 / githubweb
107. I have interfaced the new subroutine containing all of the PDF closure-related — bmg2 / githubweb
108. I got rid of some variables that were brought into advance_clubb_core by use statements — bmg2 / githubweb
109. I cleaned up more compiler warnings for unused variables.  The warnings came from g95. — bmg2 / githubweb
110. I have added a second call to subroutine generate_pdf_params.  This one occurs — bmg2 / githubweb
111. I moved the setting of qclvar and thlprcp_out to after the second call to — bmg2 / githubweb
112. I have declared the l_use_ice_latent option and the l_call_pdf_closure_twice — bmg2 / githubweb
113. I added a local cslculation of sigma_sqd_w near the top of subroutine — bmg2 / githubweb
114. I am changing the inputs and outputs of subroutine advance_clubb_core so that — bmg2 / githubweb
115. I added code so that stats that are internal to subroutine generate_pdf_params — bmg2 / githubweb
116. I have updated subroutine advance_clubb_core so that pdf_params_zm is now passed — bmg2 / githubweb
117. Ticket #799 -- Moved iiPDF_... module variables from module corr_varnce_module to module array_index -- The results of the priority cases are bin-diff identical — savva / githubweb
118. Ticket #798 -- Renamed d_variables to pdf_dim -- The results of the priority cases are bin-diff identical — savva / githubweb
119. — Vince Larson / githubweb
120. — Vince Larson / githubweb
121. I added a new subroutine, init_pdf_params, to pdf_parameter_module.F90. — bmg2 / githubweb
122. I renamed the subroutine pack_pdf_params found in setup_clubb_pdf_params.F90 — bmg2 / githubweb
123. I am now using the new subroutine init_pdf_params to initialize the — bmg2 / githubweb
124. I removed the CAM_CLUBB preprocessor directives from pack_pdf_params_api, — bmg2 / githubweb
125. clubb:ticket:800 -- Changed fatal errors statements to debug level 0. — savva / githubweb
126. I updated CLUBB stats so that wpthvp, wp2thvp, rtpthvp, and thlpthvp — bmg2 / githubweb
127. I have added the coding infrastructure to output additional statistics — bmg2 / githubweb
128. This is a bug fix for the Sun compiler.  The variables pdf_params_zm and — bmg2 / githubweb
129. I am updating the hydrometeor PDF code to set mu_hm_1 and — bmg2 / githubweb
130. Running the Bitten tests. — bmg2 / githubweb
131. I added some comments so that CLUBB-SILHS would be consistent with — Vince Larson / githubweb
132. As a first step, I changed all instances of rrtthl to corr_rt_thl_1. — bmg2 / githubweb
133. I have added corr_rt_thl_2 to the code to go along with corr_rt_thl_2. — bmg2 / githubweb
134. I have added some code to add corr_w_rt_1, corr_w_rt_2, corr_w_thl_1, and corr_w_thl_2 — bmg2 / githubweb
135. I added new statistics to the CLUBB _zt output files, specifically corr_w_rt_1, corr_w_rt_2, — bmg2 / githubweb
136. I am updating the equations for wp2rtp, wp2thlp, wprtp2, and wpthlp2 to include — bmg2 / githubweb
137. I am adding a special function to calculate the within-component correlation of — bmg2 / githubweb
138. I added variables corr_w_chi_1, corr_w_chi_2, corr_w_eta_1, and corr_w_eta_2 — bmg2 / githubweb
139. I am adding corr_w_chi_1, corr_w_chi_2, corr_w_eta_1, and corr_w_eta_2 to type — bmg2 / githubweb
140. Now that the PDF component correlations of w and chi, as well as w and eta, — bmg2 / githubweb
141. I am adding statistical output for corr_w_chi_1, corr_w_chi_2, corr_w_eta_1, — bmg2 / githubweb
142. I am changing the name of the flag l_fix_chi_eta_correlations to — bmg2 / githubweb
143. The two component normal (double Gaussian) PDF used by CLUBB will now be — bmg2 / githubweb
144. I moved the checking of the options for the PDF call placement to subroutine — bmg2 / githubweb
145. I am altering setup PDF parameters to be able to read in the values of — bmg2 / githubweb
146. I am adding the new file new_pdf.F90 to the CLUBB core directory.  So far, it — bmg2 / githubweb
147. I am adding a large amount of code to the new PDF.  I have filled in the driver — bmg2 / githubweb
148. I am adding code to the new PDF that calculates the minimum and maximum — bmg2 / githubweb
149. I added a new iiPDF entry for the new PDF, and I neatened some of the current — bmg2 / githubweb
150. I added an option to call the new PDF from subroutine pdf_closure. — bmg2 / githubweb
151. I had to add checking for the new PDF so someone does not try to run it — bmg2 / githubweb
152. I made a couple changes to (1) initialize two variables that aren't used by the — bmg2 / githubweb
153. I added a conditional to the subroutine that sets the responder parameters. — bmg2 / githubweb
154. I have added the beginnings of a new unit test for the PDF parameters. — bmg2 / githubweb
155. I have updated the PDF parameter unit test to make a call to the full PDF (for — bmg2 / githubweb
156. I have added a feature to the PDF parameter unit tests which allows the user — bmg2 / githubweb
157. In the setter variable description and subprograms, I made a name change from — bmg2 / githubweb
158. I have updated the method of calculating the setter variable so that mu_x_1 — bmg2 / githubweb
159. I added primarily some more documentation and notes. — bmg2 / githubweb
160. I added some more comments documenting the code. — bmg2 / githubweb
161. I got rid of some of the expressions that a script might try to flag as — bmg2 / githubweb
162. I added much more documentation about the responder variable.  Specifically, — bmg2 / githubweb
163. I am adding the new file, original_pdf.F90, as the new home for the ADG1, ADG2, — bmg2 / githubweb
164. I have now switched the PDF closure code over to calling the code that had been — bmg2 / githubweb
165. I updated the documentation in the code comments for the setter method and — bmg2 / githubweb
166. I added a comment. — bmg2 / githubweb
167. I added a new function, calc_comp_corrs_binormal, to pdf_utilities.F90.  This — bmg2 / githubweb
168. I added some more descriptive comments and a new function that calculates the — bmg2 / githubweb
169. I updated the code so that coef_sigma_x_1_sqd and coef_sigma_x_2_sqd are passed — bmg2 / githubweb
170. I fixed a mistake. — bmg2 / githubweb
171. I have added code to call the new function that calculates wp4 implicitly from — bmg2 / githubweb
172. I moved the calculations of wp2xp (wp2rtp and wp2thlp), wp4, and wpxp2 (wprtp2 — bmg2 / githubweb
173. I added another function to the new PDF.  This function helps to calculate — bmg2 / githubweb
174. I added a special case for the wpxp2 implicit code. — bmg2 / githubweb
175. Back in clubb:r8409, the PDF component correlations of w and rt and w and — bmg2 / githubweb
176. I added a subroutine that calculates the implicit and explicit portions of the — bmg2 / githubweb
177. I renamed original_pdf.F90 as adg1_adg2_3d_luhar_pdf.F90. — bmg2 / githubweb
178. I added statistical output for F_w, F_rt, F_thl, min_F_w, max_F_w, min_F_rt, — bmg2 / githubweb
179. I split the new PDF into two files.  I added a new file that currently houses — bmg2 / githubweb
180. I clipped temperature within the Goff-Gratch functions for saturation over liquid and ice. — Vince Larson / githubweb
181. I initialized some output variables in order to prevent a runtime error. — bmg2 / githubweb
182. I made a sub-driver level subroutine for the calculations necessary for a — bmg2 / githubweb
183. I added code to allow the variable (of w, rt, or theta-l) with the greatest — bmg2 / githubweb
184. I added calls to the functions and subroutines that calculate the implicit and — bmg2 / githubweb
185. I changed coef_wp2xp_explicit (coef_wp2rtp_explicit and coef_wp2thlp_explicit) — bmg2 / githubweb
186. I am adding a new file for the new trivariate skewness-dependent analaytic — bmg2 / githubweb
187. I fixed a bug in the new Trivariate skewness-dependent analytic double Gaussian — bmg2 / githubweb
188. In order for the TSDADG PDF to work correctly, when Skx * sgn( <w'x'> ) >= 0, — bmg2 / githubweb
189. In order to clarify coding in CLUBB, I am moving a block of code that is — bmg2 / githubweb
190. I am fixing a bug where rtp2 and thlp2 (and sclrp2) were not preserved when — bmg2 / githubweb
191. I updated the TSDADG PDF by adding the responding variable description, the — bmg2 / githubweb
192. When ADG1 or ADG2 are not used, we have to set alpha_rt, alpha_thl, and — bmg2 / githubweb
193. I am calling the new TSDADG PDF from subroutine pdf_closure. — bmg2 / githubweb
194. Clarity changes to the new TSDADG PDF. — bmg2 / githubweb
195. I added some references to the CLUBB-SILHS tech doc. — Vince Larson / githubweb
196. I fixed a bug in the calculation of PDF component variances in the new TSDADG — bmg2 / githubweb
197. I added more references to the CLUBB-SILHS tech doc. — Vince Larson / githubweb
198. I have set the tunable parameters F_x and zeta_x to skewness functions for the — bmg2 / githubweb
199. I needed to increase the limit of nvarmax_zt so that LBA (and other — bmg2 / githubweb
200. I changed the URL references to the CLUBB-SILHS overview document. — Vince Larson / githubweb
201. Changed variable and subroutine names, see ticket 810 and 811 — hoc_browser / githubweb
202. I have added the Lewellen and Yoh (1993) PDF to CLUBB for testing and comparison — bmg2 / githubweb
203. Fixed line length exceding 100 characters warnings — Gunther Huebler / githubweb
204. Changed the arrangement of variables in the subroutine compute_mixing_length as well as calls to it clubb:ticket:815 — Gunther Huebler / githubweb
205. Fixed lines exceeding 100 characters warnings clubb:ticket:815 — Gunther Huebler / githubweb
206. I added an option to incorporate the buoyancy term into CLUBB's eddy diffusivity for momentum. — Vince Larson / githubweb
207. I added c_K10 as a tuning parameter in front of the new momentum eddy diffusivity. — Vince Larson / githubweb
208. Removed unused parameters to clear warnings clubb:ticket:803 — Gunther Huebler / githubweb
209. I multiplied the eddy diffusivity for momentum by a skewness-dependent factor — Vince Larson / githubweb
210. I changed the way that F_rt and F_thl are set in the new PDF.  They are now set — bmg2 / githubweb
211. I changed the flag setting on the new PDF so that it always uses w as the setter — bmg2 / githubweb
212. Changed many equality comparisons using == to a safer epsilon method, this should end up being BIT_CHANGING, clubb:ticket:803 — Gunther Huebler / githubweb
213. Improved binary search algorithm clubb:ticket:818 — Gunther Huebler / githubweb
214. Added warning messages to function binary_search clubb:ticket:818 — Gunther Huebler / githubweb
215. Removed unused variables causing warnings clubb:ticket:803 — Gunther Huebler / githubweb
216. I updated the call to the new PDF so that Skrt and Skthl are intent INOUT — bmg2 / githubweb
217. Removed many eqaulity comparison warnings in precipitation_fraction.F90 clubb:ticket:803 — Gunther Huebler / githubweb
218. I am adding a new function, calc_wpxpyp_pdf, to pdf_closure_module.F90.  This — bmg2 / githubweb
219. I finished adding the units to the variable descriptions in — bmg2 / githubweb
220. The calculation of higher-order scalar terms <w'^2^ sclr'>, <w'sclr'^2^>, — bmg2 / githubweb
221. I added the tunable or adjustable parameters for the new PDF to CLUBB's list — bmg2 / githubweb
222. Fixed various warnings. Mainly by removing unused variables and commenting out unused procedures. See clubb:ticket:803 — Gunther Huebler / githubweb
223. I am committing a line of code that limits the adjusted correlation of rt and — bmg2 / githubweb
224. I implemented a new method to handle cumulus momentum fluxes. — Vince Larson / githubweb
225. Switched from using the erf function defined by anl_erf to the intristic erf function. This should be BIT_CHANGING see clubb:ticket:804 — Gunther Huebler / githubweb
226. Removed file anl_erf.F90, it is no longer used — Gunther Huebler / githubweb
227. I am altering the solution to the wp3 predictive equation to calculate the — bmg2 / githubweb
228. I fixed the problem with the wp3 budgets as a result of r8584.  The budgets in — bmg2 / githubweb
229. I altered the names of the turbulent advection functions that are closed by — bmg2 / githubweb
230. I added a couple comments about how the discretization of the turbulent — bmg2 / githubweb
231. I added the function that sets up the implicit calculation of the wp3 turbulent — bmg2 / githubweb
232. I added a function that calculates the explicit form of the wp3 turbulent — bmg2 / githubweb
233. I am adding a function to calculate the turbulent advection of wpxp explicitly. — bmg2 / githubweb
234. I am adding a function to calculate the turbulent advection of xp2 and xpyp — bmg2 / githubweb
235. I interfaced the wp3 explicit turbulent advection code with CLUBB.  It is — bmg2 / githubweb
236. I am interfacing the wpxp explicit turbulent advection option with the rest of — bmg2 / githubweb
237. I fixed a small bug with the explicit turbulent advection option for wpxp. — bmg2 / githubweb
238. I am interfacing the xp2/xpyp explicit turbulent advection term with CLUBB code. — bmg2 / githubweb
239. I added the l_explicit_turbulent_adv_* family of flags to the new PDF, for some — bmg2 / githubweb
240. I am packing up the implicit coefficients and explicit terms calculated by the — bmg2 / githubweb
241. Made epss variable based on its use by adding flag l_high_accuracy_parab_cyl_fnc. Low accuracy for runs (epss=1e-4) and high accuracy for tests (epss=1e-15), see clubb:ticket:804 — Gunther Huebler / githubweb
242. I made a slight change to function calc_coef_wpxp2_implicit in new_pdf.F90. — bmg2 / githubweb
243. I have completed interfacing the implicit form of the wp3 turbulent advection — bmg2 / githubweb
244. When the l_explicit_turbulent_adv_wp3 flag is enabled, the turbulent advection — bmg2 / githubweb
245. I cleaned up the Skx_module and added an additional function, — bmg2 / githubweb
246. I fixed a bug in the calculation of scalar skewness.  It was being set to 0, — bmg2 / githubweb
247. I moved the location of the LG 2005 ansatz to calculate xp3 because it would be — bmg2 / githubweb
248. I reverted clubb:r8611 because (1) having the code in the other location — bmg2 / githubweb
249. I have added a new function, term_ta_new_pdf_lhs, to — bmg2 / githubweb
250. I have linked the implicit turbulent advection code for rtp2 and thlp2 to the — bmg2 / githubweb
251. I have added a new file that has two options for handling the xp3 term for — bmg2 / githubweb
252. I have interface the new xp3 code to the rest of CLUBB.  It can be turned on — bmg2 / githubweb
253. I added a driver level subroutine for the new advance xp3 code.  This will make — bmg2 / githubweb
254. I added budget stats for rtp3 and thlp3 to CLUBB. — bmg2 / githubweb
255. I am adding code that allows the turbulent advection of wpxp to be treated — bmg2 / githubweb
256. Redesigned error code system. Errors are now treated as strictly fatal, meaning they are only thrown by procedures which cannot continue or has detected something that will crash the code. When the error occurs the procedure which detected it should immediately report it and either return to its calling procedure or stop the program, this is to avoid a cascade of error reports due to a single error. Other problems are now reported at level 1 and 2 debugging and only write the error out rather than set a code. — Gunther Huebler / githubweb
257. Various small comment removals and returned some functionality to api interface clubb:ticket:800 — Gunther Huebler / githubweb
258. A variable found to be less than zero now only gives a warning rather than setting an error code. Some fatal error checks also changed from debug level 2 to 0 clubb:ticket:800 — Gunther Huebler / githubweb
259. This is the first part of a two-part change.  I am updating plotgen plots so — bmg2 / githubweb
260. In part 2 of this two part commit, I have added rc_coef to the list of — bmg2 / githubweb
261. Various debug checks added/improved. Negative value checks changed back to throw fatal errors. Parameterization check changes to disclude thermodynamic variables at grid level 1 clubb:ticket:800 — Gunther Huebler / githubweb
262. Check negative no longer assumes array sizes are gr%nz, this should fix the SAM-CLUBB-SILHS error in the nightly tests clubb:ticket:800 — Gunther Huebler / githubweb
263. I'm pretty sure this will fix the check negative issues this time, fortran has some lacking features when it comes to arrays clubb:ticket:800 — Gunther Huebler / githubweb
264. Changed calls to parameterization check to work with the new check negative implementation clubb:ticket:800 — Gunther Huebler / githubweb
265. — Gunther Huebler / githubweb
266. Removed rtm(5) = -1 line, it was a test accidentally left in and caused many nightly tests to fail clubb:ticket:800 — Gunther Huebler / githubweb
267. Changed error checking if statements to check for equality to clubb_fatal_error rather than inequality to clubb_no_error, makes them more readable clubb:ticket:800 — Gunther Huebler / githubweb
268. Fixed unused variable warnings related to error code changes — Gunther Huebler / githubweb
269. I am generalizing the wprcp, wp2rcp, rtprcp, and thlprcp equations to account — bmg2 / githubweb
270. Added error header functionality. Using the err_header character array from error_code in a write statment will print out either the thread number or process ID along with CLUBB -- ERROR: . This is mainly to  keep track of error messages is multithreaded scenarios clubb:ticket:800 — Gunther Huebler / githubweb
271. In r8659, I accidentally overwrote some code.  This commit restores the prior — bmg2 / githubweb
272. Sigh — bmg2 / githubweb
273. Added clubb debug level checks to error checking statements clubb:ticket:800 — Gunther Huebler / githubweb
274. Changed many stop commands to return commands and added more err_code checks clubb:ticket:800 — Gunther Huebler / githubweb
275. Reverted api changes that broke SAM and WRF — Gunther Huebler / githubweb
276. I am adding the semi-implicit formulation of wprtpthlp, which is the turbulent — bmg2 / githubweb
277. I am adding output statistics for the implicit and semi-implicit coefficients — bmg2 / githubweb
278. I corrected the units on a couple of implicit coefficients. — bmg2 / githubweb
279. I fixed a bug. — bmg2 / githubweb
280. Removed failure_test cases from input/case_setups, they neither work properly nor are needed anymore. Added test_fatal_error_handling.bash script which tests for various errors defined by an identifier in the code, more description available in the bash file. Also added more descriptive error output to some parts of code. This change focuses only on output and comments and is BIT IDENTICAL clubb:ticket:800 — Gunther Huebler / githubweb
281. Removed reference to run_type 'failure_test' as it no longer exists. Added more description to fatal errors produced by calls to xm_wpxp_solve. This change is BIT IDENTICAL clubb:ticket:800 — Gunther Huebler / githubweb
282. I am fixing a bug with the CLUBB tuner.  Variables that were allocated at the — bmg2 / githubweb
283. Completed the list of variables that get reported from errors within advance_wp2_wp3 and advance_xm_wpxp. Also added a check that outputs an error message when T_in_K is less than 200K in the lowest 10 grid levels, this check is done in subroutine parameterization_check. clubb:ticket:800 — Gunther Huebler / githubweb
284. Made all debug levels produce the same output, see clubb:ticket:823 — Gunther Huebler / githubweb
285. I am moving type variable implicit_coefs_terms from new_pdf_main.F90 to — bmg2 / githubweb
286. Modified many aspects of the tuner, mostly within esa_driver. Also added check to ensure that C7 and C11 have valid values before the run is tried, this should stop the fire tuning nightly test from crashing. See clubb:ticket:802 — Gunther Huebler / githubweb
287. Added checks in subroutine setup_parameters() to ensure that C7b and C11b are within [0:1] see clubb:ticket:802 — Gunther Huebler / githubweb
288. This should fix the thlm out of bounds error on clubb:ticket:828 — Gunther Huebler / githubweb
289. I changed the name of type variable new_pdf_implct_coefs_terms to — bmg2 / githubweb
290. Changed T_in_K check within subroutine parameterization_check to instead check thlm, see clubb:ticket:800 and clubb:ticket:828 — Gunther Huebler / githubweb
291. I added a flag option to clip the (large, negative) effects of microphysics on — bmg2 / githubweb
292. I added a flag option to calculate the minimum threshold for xp2 (rtp2 and — bmg2 / githubweb
293. I added a special max magnitude correlation for fluxes wprtp and wpthlp.  This — bmg2 / githubweb
294. Made better esa_driver, made tuner_test to test the driver, added variable range checks. Tried to make the tuner in better in general, but that whole bunch of code needs nothing short of replacement. This commit is bit identical execpt for tuning results, see clubb:ticket:802 for a bunch more information — Gunther Huebler / githubweb
295. This commit sets C8b=0.02, changes the non-linear damping on wp3 — Vince Larson / githubweb
296. Added a flag and moved Skw_max_mag from constants to parameters, this allows the changes made in commit clubb:r8719 to be reverted by modifying the configuration flags and the tunable parameters list, see clubb:ticket:829 — Gunther Huebler / githubweb
297. I am adding a general purpose function for the turbulent advection of CLUBB's — bmg2 / githubweb
298. I added/changed a couple comments for the rhs portion of the generalized — bmg2 / githubweb
299. The turbulent advection file that handles turbulent advection for predictive — bmg2 / githubweb
300. I added a function to turbulent_adv_pdf.F90, called sgn_turbulent_velocity, that — bmg2 / githubweb
301. Whoops, I forgot to make wpxpyp_zm and xpyp intent (in). — bmg2 / githubweb
302. Added functionality to make the  hydrometeor variances depend on the horizontal grid spacing, see clubb:ticket:830 — Gunther Huebler / githubweb
303. I am updating the code that advances predictive variances and covariances in — bmg2 / githubweb
304. Renamed init_pdf_hydromet_arrays to init_pdf_hydromet_arrays_api since it is meant to be used by host models, clubb:ticket:830 — Gunther Huebler / githubweb
305. I am updating the code that advances predictive scalar fluxes (<w'x'>) in — bmg2 / githubweb
306. As a first step toward having code that can clip mean values of hydrometeor — bmg2 / githubweb
307. init_pdf_hydromet_arrays_api now sets the value of hydromet_dim as well, this should fix the wrf tests, but doesn't seem to fix cam. clubb:ticket:830 other:ticket:562 — Gunther Huebler / githubweb
308. I have now interfaced the subroutine that I made out of the code that clips — bmg2 / githubweb
309. I added new code that clips the overall correlation of w and rt or the overall — bmg2 / githubweb
310. I added stats for term_wprtp2_explicit and term_wpthlp2_explicit, which are — bmg2 / githubweb
311. Made clubb_fatal_error public so host model code can detect fatal errors. clubb:ticket:800 — Gunther Huebler / githubweb
312. Reverted advance_windm_edsclrm_module.F90, accidentally committed test code, clubb:ticket:800 — Gunther Huebler / githubweb
313. Fixed nightly tests — Gunther Huebler / githubweb
314. I have added code to allow C2 to be adjusted by multiplying by the greater of — bmg2 / githubweb
315. I moved the location of the declaration and setting of new model flags to — bmg2 / githubweb
316. Improved computational speed of windm_edsclrm_rhs and added subroutine. This commit should be BIT_CHANGING as it does calculations in different orders. Only the most sensitive cases have any noticable plot differences. See clubb:ticket:834 — Gunther Huebler / githubweb
317. Fixed nightly uninitialized variables test. Renamed diffusion_zt_lhs_inner to diffusion_zt_lhs_all, it is now also capable of calculating all values including boundaries now, it's beneficial to calculate the upper boundary value in this case and I imagine other may need the lower boundary calculated as well. Cleaned up windm_edsclrm_rhs A LOT, it's more readable and has clearly ordered steps now. clubb:ticket:834 — Gunther Huebler / githubweb
318. Actually fixed nightly tests now (hopefully). A loop variable was being used outside a loop, which is an error that passes all the compiler tests. Also the intel compiler config file does not cause errors running if a index variable has not been initialized either, which resulted in correct seeming plots, timing, and output. I'm going to have to be stricter with the testing during these changes as loop variables and such will be often modified, I'll be sure to do a run after compiling with each compiler on top of confirming the output and running the uninitialized variable test manually. Because the last commit fixed the 2nd value of the rhs array the change will be BIT_CHANGING, but the plot output is identical for all but the most sensitive cases. clubb:ticket:834 — Gunther Huebler / githubweb
319. Optimized the array setup procedures within advance_xp2_xpyp. Added more functions which handle entire arrays at a time rather than single terms to calculate the turbulence, mean advection, and diffusion terms. Because these changes reordered some calculations the results are BIT_CHANGING, but the plots are the same for all but the most sensitive cases. clubb:ticket:834 — Gunther Huebler / githubweb
320. Reverted stats_clubb_utilities, accidental commit — Gunther Huebler / githubweb
321. This should fix the nightly budget test. We may want to look into reducing the redone calculations for the stats code in the future, this lhs/rhs improving endeavour is definitely helping with that but more could be done. clubb:ticket:834 clubb:ticket:837 — Gunther Huebler / githubweb
322. — Vince Larson / githubweb
323. Impoved the computational efficiency of xm_wpxp_rhs and xm_wpxp_lhs, see clubb:ticket:834 — Gunther Huebler / githubweb
324. This commit implements the effects of splatting on wp3. — Vince Larson / githubweb
325. I am making the first step toward committing code that allows for the option — bmg2 / githubweb
326. I added code to allow the option of predicting upwp and vpwp by using the — bmg2 / githubweb
327. I took the liberty of upgrading CLUBB's PDF closure and related code to a vector — bmg2 / githubweb
328. I updated the monotonic flux limiter to account for vector variables u and v. — bmg2 / githubweb
329. I am adding two new budget stats, um_mfl and vm_mfl, to CLUBB's zt stats output. — bmg2 / githubweb
330. In r8775, I forgot to add the new um_mfl and vm_mfl stats to the monotonic flux — bmg2 / githubweb
331. I am turning on the l_predict_upwp_vpwp code! — bmg2 / githubweb
332. Improved the computational efficiency of the LHS and RHS setup procedures in advance_wp2_wp3_module. This involved changing the order of calculations which casues this commit to be BIT_CHANGING for only the most sensitive cases. See clubb:ticket:834 — Gunther Huebler / githubweb
333. Improved computational efficiency of windm_edsclr_lhs. See clubb:ticket:834 — Gunther Huebler / githubweb
334. Changed the name of _turb to _ta, and _advm to _ma to keep with the current naming conventions. Also fixed line length warnings. clubb:ticket:834 — Gunther Huebler / githubweb
335. Added grid_class to the dependency lists of the pdf files that were changed in commit 8773 — Gunther Huebler / githubweb
336. Accidental commit, undoing 8783 — Gunther Huebler / githubweb
337. I am changing the default setting of flags l_min_wp2_from_corr_wx and — Brian Griffin / githubweb
338. Modified compute_Cx_fnc_Richardson. Made it a subroutine, modified the algorithm slightly, removed use of allocates and deallocates from it, removed verical_avg call to avoid redoing calculations and precalculated some divides. This saved clubb_core about 8% runtime overall. see clubb:issues:834 — Gunther Huebler / githubweb
339. Removed print line. Also this commit is BIT_CHANGING since it reorders some calculations, but the difference only affects the most sensitive cases. — Gunther Huebler / githubweb
340. Changed the way that init_pdf_params zeros out values as well as a spot in pdf_closure which does the same type of thing. Also changed the debug level for pdf_closure_check to 2. This all saved about 3% overall. see clubb issue 834 — Gunther Huebler / githubweb
341. I am adding source code for the introduction of budgets for predictive upwp — Brian Griffin / githubweb
342. Improved computational speed of compute mixing length by modiying the algorithm slightly, avoiding unnecessary divides, and precalculating values. This saves about 6.5% overall. #834 — Gunther Huebler / githubweb
343. Improved computational efficiency of band_solve by reworking the way that the lulhs matrix is set up. #834 — Gunther Huebler / githubweb
344. Modified flatau equation which calculates saturation vapor pressure. This was done by modifying the form of the polynomial to allow the cpu to take advantage of out-of-order computations. The new coefficients were obtainted from matlab by finding the roots and multiplying/adding them where I needed to removed the complex numbers. The differences in any values are negligible, and the plots are only affected in the most sensitive cases, but this is BIT_CHANGING. #834 — Gunther Huebler / githubweb
345. Copied code from linear_interp_factor to linear_interpolated_azt/_azm. This allows those sections of code to become vectorized. Also reversed the calculation order of linear_interpolated_azt allowing for contiguous memory access. This saves about 3% overall and there are no visible differences in the plots when compared to last commit. #834 — Gunther Huebler / githubweb
346. Changed vertical_avg and vertical_intergral to use dz rather than the inverse, they were dividing by an inverse and divisions are expensive. Also modified vertical_avg algorithm to no longer use vertical_integral, this saves some calculations. #834 — Gunther Huebler / githubweb
347. Improved efficiency of clip_covar. The only change is saving the result of max_mag_corr * sqrt( xp2(k) * yp2(k) ) rather than calculating it three times. #834 — Gunther Huebler / githubweb
348. I made the surface splatting terms conservative.  That is, I subtracted from wp2_sfc — Vince Larson / githubweb
349. I added clipping on up2 and vp2 that prevents these fields from exceeding 1000 m^2/s^2. — Vince Larson / githubweb
350. This commit turns on splatting of thermals (i.e., C_wp2_splat is nonzero).  Hence it is BIT_CHANGING. — Vince Larson / githubweb
351. Added functionality to allow cloud_frac to be better estimated at extreme values which produce either 0 or 1 when computed. The amount of estimation is controlled by the variable max_num_stdevs, indicating the number of standard deviations away from the mean of a pdf a value can be before being considered statistically insignificant. This speeds up the code but reducing the calculations required in calc_cloud_frac_component and calc_xprcp_component, and avoiding underflow errors when computing exponentials with too small of a number. By comparing plots and mathematical evaluation (erf(5)~=0), it seems the best value for max_num_stdevs is 5. This increases computational efficiency by about 10% #834 — Gunther Huebler / githubweb
352. Update advance_clubb_core_module.F90 — noreply / githubweb
353. I clipped sigma_sqd_w to prevent interpolated values of it — Vince Larson / githubweb
354. I added a new option to diagnose the dissipation time scale, tau, first — Vince Larson / githubweb
355. I found a new way to diagnose upthvp.  Instead of using a bound on correlations, it relies — Vince Larson / githubweb
356. introducing error into clubb core for testing larson-group/sys_admin#533 — mcfadd34 / githubweb
357. reverting error that was introduced larson-group/sys_admin#533 — mcfadd34 / githubweb
358. I am briefly changing some of the flag and parameter settings in CLUBB — bmg2 / githubweb
359. Revert "I am briefly changing some of the flag and parameter settings in CLUBB" — bmg2 / githubweb
360. I added a couple of comments reminding users to change the conditions in — bmg2 / githubweb
361. Revert "Revert "I am briefly changing some of the flag and parameter settings in CLUBB"" — bmg2 / githubweb
362. Revert "Revert "Revert "I am briefly changing some of the flag and parameter settings in CLUBB""" — bmg2 / githubweb
363. I committed a subroutine, diagnose_upxp, that calculates — Vince Larson / githubweb
364. Improved the computational efficiency of pdf_closure. This speed the code up by about 6% overall. Because it changed the order of some calculations it is BIT_CHANGING but does not change plots. clubb issue #834 — Gunther Huebler / githubweb
365. I am modifying one part of setup_clubb_pdf_params.F90 to be taken out of a large — bmg2 / githubweb
366. I am updating the code within setup_clubb_pdf_parameters.F90 in order to take — bmg2 / githubweb
367. To diagnose uprcp using CLUBB's PDF machinery, — Vince Larson / githubweb
368. Continuing with diagnosis of uprcp using CLUBB's PDF, — Vince Larson / githubweb
369. More code to diagnose uprcp using CLUBB's PDF. — Vince Larson / githubweb
370. Correction for the last uprcp-related commit: — Vince Larson / githubweb
371. I am correcting the code so that the Nightly Uninitialized Variables Test — bmg2 / githubweb
372. I am continuing to pull parts of setup_pdf_parameters outside of a large "do" — bmg2 / githubweb
373. I am pulling statistical output subroutine pdf_param_ln_hm_stats outside — bmg2 / githubweb
374. Changing the range of the correlation values determined in calc_comp_corrs_binormal from [ -1.0, 1.0 ] to [ -0.99, 0.99 ] (based on value of max_mag_correlation = .99). This is the subroutine that calculates corr_rt_thl_x and should fix the issue with the WRF WPS Katrina bitten test as discussed in the commets of commit ad0ee5b9b3c253329df1208560b46d1dc4fca1c2. I suspect that it will fix the WRF-CLUBB-SILHS Restart Test as well, but I am basing that mostly off hope. — Gunther Huebler / githubweb
375. commenting out threadprivate command to test openmp bitten test larson-group/sys_admin#566 — mcfadd34 / githubweb
376. uncommenting threadprivate larson-group/sys_admin#566 — mcfadd34 / githubweb
377. I have changed the structure of setup_pdf_parameters so that the subroutine that — bmg2 / githubweb
378. Returned max check to the calculation of rcm. This should fix the PGI Compiler Nightly Test and could be BIT_CHANGING. — Gunther Huebler / githubweb
379. I am turning on the new calculation of uprcp that uses CLUBB's PDF. — Vince Larson / githubweb
380. I modified the code in setup_clubb_pdf_params.F90 to use only one call to — bmg2 / githubweb
381. I am updating CLUBB_core and SILHS in the clubb_E3SM_silhs branch to — bmg2 / githubweb
382. I am setting model flags and tunable parameters in the clubb_E3SM_silhs branch — bmg2 / githubweb
383. I temporarily set l_clip_extreme_chi_sample_pts back to false in the — bmg2 / githubweb
384. Revert "I temporarily set l_clip_extreme_chi_sample_pts back to false in the" — bmg2 / githubweb
385. I improved the error messages when LU decomp. fails within — bmg2 / githubweb
386. Improved error message prints in advance_xm_wpxp. — bmg2 / githubweb
387. I added improved LHS and RHS print statements when a LU decomp. error occurs — bmg2 / githubweb
388. I added params_list to the list of variables that are accessible through — bmg2 / githubweb
389. I am making the first step for updating the code that calculates sigma_sqd_w. — bmg2 / githubweb
390. I added a log-law height dependence to the code that diagnoses — Vince Larson / githubweb
391. I added fill_holes_hydromet_api to clubb_api_module.F90. — bmg2 / githubweb
392. I added a new python script, check_for_missing_threadprivate.py, — Vince Larson / githubweb
393. Modifying clubb's pdf_parameter type. It's now a type containing arrays, whereas before it was a type containing scalars, but used everywhere as an array of these types. This new way allows the elements of pdf_parameter to exist in contiguous memory sections, which improves computational efficiency when accessing a given parameter over all vertical levels. clubb issue #834 — Gunther Huebler / githubweb
394. Fixed dycoms restart run failure. The pdf_parameter variables are accessed via a use statement in the section of code where the restart run attempts to set their values, but since they are allocatable they do not retain their allocated status once out of scope. Adding the save attribute to pdf_params and pdf_params_zm fixes the problem. These pdf_parameter variables used in clubb standalone are not used by host models, yet they are still allocated during host model runs, something that has been noted before and will be changed. clubb issue #834 — Gunther Huebler / githubweb
395. Added temp test file — noreply / githubweb
396. Remove test file — noreply / githubweb
397. Adding conditional statement around compute_Cx_Fnc_Richardson, see clubb issue #855. This change is bit identical. — Gunther Huebler / githubweb
398. Optimizing procedures within Skx_module. The reduction in runtime is greatly dependent on system and compiler option. See clubb issue #855 and comment by Gunther on 7-1-19 for explanation. This is BIT_CHANGING but the plots only differ in the sensitive cases. — Gunther Huebler / githubweb
399. ticket #842 we added 4 tunable parameters for tau, they are Coefficient of inverse tau term contributed by background constant value, Coefficient of inverse tau term contributed by surface log law, Coefficient of inverse tau term contributed by vertical wind shear and Coefficient of inverse tau term contributed by Brunt Vaisala frequency — guozhun / githubweb
400. Modifying ADG1_ADG2_responder_params for efficiency reasons. It changes the way varnce_x_(1/2) is set when wp2 > w_tol_sqd and xp2 <= x_tol. Previously in that case it set the variances to 0, but now it sets them to xp2 since xp2 ~= 0 in that case anyway. This allows the where statement to have only two cases, and less cases is more efficient. This is BIT_CHANGING, but only affect the sensitive cases and passes the G unit tests. larson-group/clubb#855 — Gunther Huebler / githubweb
401. Replacing the local variables used in pdf_closure_module with references to the variables in pdf_params which they are meant to be stored in. This removes the need to copy the local variables into the pdf_params structure at the end, saving about 3% runtime. This is not bit changing, but does make the code a little uglier. larson-group/clubb#855 — Gunther Huebler / githubweb
402. Making procedure calls consistent with procedure definitions. Required updating after previous pdf_parameter related commit. larson-group/clubb#855 — Gunther Huebler / githubweb
403. Missed one — Gunther Huebler / githubweb
404. I have added a new file, calc_pressure.F90, which contains code for initializing — bmg2 / githubweb
405. I updated CLUBB so that pressure is updated after mean fields have been — bmg2 / githubweb
406. Removing gmres code. The files gmres_wrap.F90, gmres_cache.F90, and csr_matrix_module.F90 have been removed, and any sections of code which refer to or are needed only for gmres have been removed as well. larson-group/clubb#855 — Gunther Huebler / githubweb
407. Forgot to run previous commit with --all, so the gmres files were not removed. larson-group/clubb#855 — Gunther Huebler / githubweb
408. issue #842 — guozhun / githubweb
409. We added two new tunuable parameters: C_invrs_tau_N2_xp2 and C_invrs_tau_N2_wp2. e.g. invrs_tau_wp2_zm = invrs_tau_zm_simp + C_invrs_tau_N2_wp2 * sqrt( max( zero_threshold,zt2zm( zm2zt( brunt_vaisala_freq_sqd ) ) - 1e-4_core_rknd) ). Correspondingly, invrs_tau_wp2_zm and invrs_tau_xp2_zm are used in advance_wp2_wp3 and advance_xp2_xpyp respectively. — guozhun / githubweb
410. We added two new tunuable parameters: C_invrs_tau_N2_xp2 and C_invrs_tau_N2_wp2. e.g. invrs_tau_wp2_zm = invrs_tau_zm_simp + C_invrs_tau_N2_wp2 * sqrt( max( zero_threshold,zt2zm( zm2zt( brunt_vaisala_freq_sqd ) ) - 1e-4_core_rknd) ). Correspondingly, invrs_tau_wp2_zm and invrs_tau_xp2_zm are used in advance_wp2_wp3 and advance_xp2_xpyp respectively. 1. Some typos are corrected. 2. New tunuable parameters are added in files named errer_$casename.in (issue #842) — guozhun / githubweb
411. Update advance_clubb_core_module.F90 — noreply / githubweb
412. We put Lscale's calculation into mixing_length.F90 (subroutine calc_Lscale_directly) — guozhun / githubweb
413. Efficiency improvements to calc_turb_adv_range, more specifically the parts which split w into upward and downward components. This adds a case to zero out upward and downward components for values of w that are too small to matter, and now utilizes mkl_vml math functions to improve vectorization. These mkl_vml functions are only used when compiled with MKL, specified by adding -DMKL to compiler configuration files. This is BIT_CHANGING, plots only differ in the usual sensitive cases, and the budgets, G_unit_tests and time step tests all pass. larson-group/clubb#855 — Gunther Huebler / githubweb
414. This should fix the uninitialized variables test. mean_vert_vel_up_down was using the upper and lower grid levels, but calc_mean_w_up_down_component was not setting them. These levels aren't actually used by the algorithm in calc_turb_adv_range, but I made calc_mean_w_up_down_component set them to zero anyway since it seems like the simplest and safest solution. larson-group/clubb#855 — Gunther Huebler / githubweb
415. An additional damping is added to the invrs_tau term in the C8 equation. ticket #842 — guozhun / githubweb
416. Adding comment because commit 561fa037e7c3c326bc4bd71b6fc486e5d2a46065 was BIT_CHANGING, but missing the commit message specifying that. It was bit changing because the upper and lower levels of mean_w_up and mean_w_down are being output to stats as of commit 0b3ec0d5fc4b89b4a6f34964af3cfda8cb89b9f7, so changing the upper and lower level values changed the stats output, even though those values are not used in any calculations. — Gunther Huebler / githubweb
417. We use zt2zm(ice_supersat_frac) replace ice_supersat_frac_zm in the additional damping of C8. — guozhun / githubweb
418. Changing ADG1_ADG2_responder_params to use a do loop with ifs instead of a where statement. This is about 1.5% faster and is bit identical. larson-group/clubb#855 — Gunther Huebler / githubweb
419. Pulling the calculation of p_in_Pa(_zm) out of the vertical loop in update_pressure, and precalculates one/kappa. This improved vectorization capabilities of the calculation of exponents, which is slow so that's important. Also added the option to use MKL_VML functions if -DMKL is specified, which is slightly more efficient. This saves about 1.5-2.5% and is bit identical if not using MKL. larson-group/clubb#855 — Gunther Huebler / githubweb
420. Renaming width_factor to width_factor_1 to indicate that it is intended for use with the first pdf component, (two-width_factor_1) is the value for the second component. larson-group/clubb#855 — Gunther Huebler / githubweb
421. Efficiency improvements to transform_pdf_chi_eta_component. Moving the where statement to if statement inside loop to avoid sqrt operations. Reducing number of divide operations, and putting some code in a loop which reduces cache misses. This is BIT_CHANGING, but not answer changing, plots only differ slightly in the most sensitive cases. larson-group/clubb#855. — Gunther Huebler / githubweb
422. Modifying calc_cloud_frac_component to optionally use mkl_vml functions. Added a different version of the procedure to handle the liquid cloud fraction specifically, so the ice_supersat_frac could remain as is. The structure of the procedure when using the MKL functions is based on the changes to calc_turb_adv_range in commit 0b3ec0d5fc4b89b4a6f34964af3cfda8cb89b9f7, since I've already tested that well and it seems to make sense to keep the code similar if it does similar things. This reduces runtime by about 2% when using MKL functions and about 0.5% otherwise. The procedures also use precalculated inverses where possible, so the results are BIT_CHANGING, but not answer changing. larson-group/clubb#855 — Gunther Huebler / githubweb
423. Refactoring the lhs and rhs setup procedures for xm_wpxp. There are a number of lhs terms that are very general, and used by all the lhs matricies. The code now calculates these terms in a new procedure calc_xm_wpxp_lhs_terms and passes those terms into the lhs setup. The same sort of thing is done with the first pressure terms and turbulent advection terms, those terms are shared between pairs of lhs/rhs calls. This is BIT_CHANGING, but is not answer changing. See comment on Jul 3 on ticket larson-group/clubb#855 — Gunther Huebler / githubweb
424. Update advance_clubb_core_module.F90 — noreply / githubweb
425. Update advance_clubb_core_module.F90 — noreply / githubweb
426. I switched on direct diagnosis of tau rather than Lscale. — Vince Larson / githubweb
427. I updated the pressure initialization for cases that use sounding that is given — bmg2 / githubweb
428. I changed the function calculate_thvm from a pre-defined vector of size nz to — bmg2 / githubweb
429. I updated the calculation of thvm in advance_clubb_core to use the — bmg2 / githubweb
430. Adding SAVE attribute to some stats variables, as it was causing compiler errors when using the newest version of the gfortran compiler. Also commenting out Lapack library dependency from gfortran config file, this required additional Lapack source files be added. Now, no Lapack library files are required to compile CLUBB, whereas before, the source was being compiled, but the missing dependencies we're being added from libraries. This is BIT_CHANGING in all cases when using the gfortran compiler, but only in some cases when using the ifort compiler. Some plots, such as rico, are noticably different when compiled with gfortran, but are bit identical when compiled with ifort. The intel implementation of Lapack used by the ifort compiler must be more similar to the source Lapack than was the Lapack library that was being used for the gfortran compiler. — Gunther Huebler / githubweb
431. Adding a subroutine in advance_xp2_xpyp to calculate the turbulent advection terms and modying the rhs and lhs setup procedures to accept these turbulent advection terms as inputs. Before, the turbulent advection terms were calcualted within the rhs and lhs setup procedures, but this resulted in expensive redundant calculations. larson-group/clubb#855 — Gunther Huebler / githubweb
432. Changing where statement that was causing floating point errors to a do with if's. This should allow code compiled with the newest version of gfortran to run to completion for microphysics enabled cases. This is BIT_CHANING in microphysics cases, but the values of the output arrays of the only changed subroutine only differ starting around roughly the 13th decimal place. larson-group/clubb#859 larson-group/sys_admin#626 — Gunther Huebler / githubweb
433. I am committing a test where I changed subroutine ADG1_w_closure — bmg2 / githubweb
434. Changing determination of threshold used to clip large values of rtp2. Before it was possible that this large value clipping introduced a value before tolerance, if rtm was too small. Causing addition problems and potentially crashes. This is BIT_CHANGING. larson-group/clubb#862 — Gunther Huebler / githubweb
435. Finally fixing line length error in pdf_closure — Gunther Huebler / githubweb
436. Adding more Lapack source files, and a new file to interface with Lapack routines in general. This allows us to call a general interface procedure that can handle single or double precision routines. This should fix the ifort bug we've been seeing, and should be a more robust way to handle this double/single precision situation in general. Works with all compilers, and in single or double precision, producing bit identical results. See larson-group/clubb#861 — Gunther Huebler / githubweb
437. Adding blunt clipping to below ground level of xm variables, keeping their value at least tolerance. This prevents the crashing of mc3e caused by rtm being < 0. This is BIT_CHANGING, but only for mc3e, and the plots are very similar. Which must mean that mc3e is our only case where rtm becomes too small. larson-group/clubb#862 — Gunther Huebler / githubweb
438. This commit is BIT_CHANGING. It is mainly because 1) We changed the equation of tau_xp2_zm, producing a better agreement with LES. 2) Many parameters have been retuned. We reduce nu2 and c_k2, because they bring us stronger scalar variances,especially for RFO1. We set C1=1, because it helps to reduce wp2 near cloud top. We also set C6=2 to generate stronger fluxes etc. — guozhun / githubweb
439. Update advance_helper_module.F90 — noreply / githubweb
440. Update advance_clubb_core_module.F90 — noreply / githubweb
441. Update advance_helper_module.F90 — noreply / githubweb
442. Adding C_invrs_tau_N2_wpxp to the initmax namelist. This should fix the fire tuning crashes. larson-group/sys_admin#626 — Gunther Huebler / githubweb
443. I am adding a file for the new hybrid PDF, which combines the w equation set — bmg2 / githubweb
444. I updated the function to calculate the implicit coefficient for the wp4 term, — bmg2 / githubweb
445. I made some changes to new_hybrid_pdf.F90 so that it would compile in its — bmg2 / githubweb
446. I edited that subroutine that calculates the implicit coefficient and explicit — bmg2 / githubweb
447. I updated the subroutine that calculates the implicit coefficient and explicit — bmg2 / githubweb
448. Replaced rrm_cond with rrm_evap and Nrm_cond with Nrm_evap because they described the same quantity. This is BIT_CHANGING just because the output now contains the N/rrm_evap instead of N/rrm_cond variable name. No changes were made to the values themselves. — nselke / githubweb
449. I am adding a new file, new_hybrid_pdf_main.F90, as a driver file for the new — bmg2 / githubweb
450. I worked more the functions for the new hybrid PDF. — bmg2 / githubweb
451. Refactoring advance_xp2_xpyp to have the capability to perform only one combined solve when the lhs matricies are equivalent. larson-group/clubb#855 — Gunther Huebler / githubweb
452. I changed all the PDF utility functions in pdf_utilities.F90 to elemental — bmg2 / githubweb
453. I forgot a "then" to go with an "elseif". — bmg2 / githubweb
454. Adding intent(in) attribute to rhs_ta terms and making scalar forcings local variables, since that is what they were supposed to be. larson-group/clubb#855 — Gunther Huebler / githubweb
455. Adding case to and modifying xp2_xpyp_solve to remove the need for xp2_xpyp_solve_multiple. larson-group/clubb#855 — Gunther Huebler / githubweb
456. Refactoring advance_xm_wpxp to clean up code. Now subroutines solve_xm_wpxp_with_multiple_lhs and solve_xm_wpxp_with_single_lhs are called, rather than having huge chunks of similar code. Also changing the way calc_xm_wpxp_ta_terms works, it uses other input variables rather than coef_ and term_ arguements and instead calculates those locally to abstract functionality. This is BIT_CHANGING for some cases, but idenetical for some with some compilers. There are no visible differences in plots when tested with a number of different flags, and gabls2 (which uses scalars) are also the same. larson-group/clubb#855 — Gunther Huebler / githubweb
457. I am continuing to build the driver subroutine for the new hybrid PDF. — bmg2 / githubweb
458. I am continuing to work on the driver file for the new hybrid PDF. — bmg2 / githubweb
459. I have completed the main parts of the driver subroutine for the new hybrid PDF. — bmg2 / githubweb
460. The code for the new hybrid PDF now compiles. — bmg2 / githubweb
461. I added an entry for the new hybrid PDF. — bmg2 / githubweb
462. I have added the new hybrid PDF to the G unit tests. — bmg2 / githubweb
463. Mathematically, sigma_x_1_sqd and sigma_x_2_sqd cannot be less than 0. — bmg2 / githubweb
464. I added code to interface the call to the new hybrid PDF with pdf_closure — bmg2 / githubweb
465. I interfaced the implicit coefficients and explicit terms used in the turbulent — bmg2 / githubweb
466. I fixed a small error.  The code compiles again now. — bmg2 / githubweb
467. Updated the larson-group.com urls to http://carson.math.uwm.edu/larson-group — pbroels / githubweb
468. I have added code that allows CLUBB to run interactively using the new hybrid — bmg2 / githubweb
469. I am updating the subroutine that calculates PDF component means and standard — bmg2 / githubweb
470. I placed proper thresholding on interpolated up2 and interpolated vp2 — bmg2 / githubweb
471. I added a limiter to keep the maximum magnitude of the correlations of — bmg2 / githubweb
472. I upgraded Nc_Ncn_eqns.F90 to use elemental functions. — bmg2 / githubweb
473. The new hybrid PDF also uses this bit of code that sets the correlation — bmg2 / githubweb
474. I made modifications to the new hybrid PDF so that that calculation of F_w — bmg2 / githubweb
475. I added the ability to handle scalars interactively to the new hybrid PDF. — bmg2 / githubweb
476. I found a couple of spots in the new hybrid PDF where I needed to add — bmg2 / githubweb
477. I added init_pdf_implicit_coefs_terms_api to clubb_api_module.F90. — bmg2 / githubweb
478. The variable type implicit_coefs_terms needs to be made public — bmg2 / githubweb
479. I changed the value of the coefficient in the F_w equation to 0.45 — bmg2 / githubweb
480. I am updating the code to pass up3, vp3, and sclrp3 out of advance_clubb_core — bmg2 / githubweb
481. I have started the process of adding the coding infrastructure — bmg2 / githubweb
482. I have completed the addition of the ability to use different up2 — bmg2 / githubweb
483. I have added 'l_use_precip_frac', 'l_do_expldiff_rtm_thlm', 'l_use_C11_Richardson' and 'l_prescribed_avg_deltaz' to the 'configurable_clubb_flags_nl' namelist. The latter was moved from 'model_setting' namelist. #856 — nselke / githubweb
484. I made the l_calc_w_corr code (turned off by default) run again by — bmg2 / githubweb
485. I added a few more flags to the 'configurable_clubb_flags_nl' namelist. Also I gave 'l_use_wp3_pr3' the parameter attribute. — nselke / githubweb
486. I have started altering argument lists to feed clubb configurable flags through them. This commit has 'l_use_precip_frac', — nselke / githubweb
487. I continued to alter argument lists. This commit covers 'l_C2_cloud_frac', 'l_diffuse_rtm_and_thlm', 'l_stability_correct_Kh_N2_zm', — nselke / githubweb
488. I continued to alter argument lists. This commit covers ' l_vert_avg_closure', 'l_trapezoidal_rule_zt', 'l_trapezoidal_rule_zm', — nselke / githubweb
489. I continued to alter argument lists. This commit covers the last flags in the namelist 'configurable_clubb_flags_nl', namely 'l_predict_upwp_vpwp', — nselke / githubweb
490. Finished altering argument lists. This commit covers the final seven flags, which are in different namelists. — nselke / githubweb
491. I introduced the 'clubb_config_flags_type'. Furthermore, I have created subroutines to set default values, to initialize the derived type and to print the derived type. — nselke / githubweb
492. I enabled the use of the 'clubb_config_flags_type'. I changed 'clubb_standalone', 'clubb_tuner' and the G_unit_tests so that they now use it. The results are bit-for-bit identical. #856 — nselke / githubweb
493. I fed pdf_params_frz into subroutine advance_clubb_core — Vince Larson / githubweb
494. Adding error code to arguement list of non-api routines where it was included in the api version. — Gunther Huebler / githubweb
495. Moving location of error messages that were in advance_clubb_core. Adding error code setting to those spots as well, they should be fatal. — Gunther Huebler / githubweb
496. Added use statement for pdf_params_frz in src/CLUBB_core/clubb_api_module.f90 and made it public. — Steffen Domke / githubweb
497. I have fixed the warnings for lines exceeding 100 characters. — nselke / githubweb
498. Passing individual flags into setup_clubb_core, rather than the type container for them. This is done for code clarity. — Gunther Huebler / githubweb
499. Trivial update to test if cams autoupdate works — noreply / githubweb
500. Revert "I am setting model flags and tunable parameters in the clubb_E3SM_silhs branch" — bmg2 / githubweb
501. I placed E3SM preprocessor commands around E3SM-specific code in — bmg2 / githubweb
502. Restoring assertion check for the vertical correlation calculation. larson-group/clubb#869 — Gunther Huebler / githubweb
503. Changing the error treshold in assert_correct_cloud_normal to use the previously defined single precision threshold. This should fix occasional errors. larson-group/clubb#869 — Gunther Huebler / githubweb
504. I added E3SM's clubb_ parameters that can be read in from the — bmg2 / githubweb
505. I added the remainder the clubb_ terms that were added previously to — bmg2 / githubweb
506. Changing error threshold in assert_correct_cloud_normal and fixing bug where we weren't passing the correct array section. This should fix the WRF parallel test and the PGI test. larson-group/clubb#869 — Gunther Huebler / githubweb
507. Small updates to acc kernel statments for general performance improvement. This is bit-for-bit. larson-group/clubb#869 — Gunther Huebler / githubweb
508. Redoing some data directives to only copy data that we need off the device. Data that is needed by assertion checks and stats will be updated conditionally. This will make the code faster when no stats/assertion checks are being done, but slower when it is. This is all bit-for-bit. larson-group/clubb#869 — Gunther Huebler / githubweb
509. Adding space because commit a8e61923fa19887baef220aa1a7c8be0f773770f was BIT_CHANGING. larson-group/clubb#869 — Gunther Huebler / githubweb
510. Simple performance improvement refactoring. Merging loops and creating tmp variable to use to help reduce memory usage. This changes the order of operations so this is BIT_CHANGING. larson-group/clubb#869 — Gunther Huebler / githubweb
511. Small performance improvement. Almost reverting the loops to their previous form using the unbounded_point variable. This is all bit-for-bit. larson-group/clubb#869 — Gunther Huebler / githubweb
512. Removing lh_clipped_vars and replacing functionality with arrays. larson-group/clubb#869 — Gunther Huebler / githubweb
513. Update latin_hypercube_driver_module.F90 — noreply / githubweb
514. Update parameters_tunable.F90 — noreply / githubweb
515. GPUizing clip_transform_silhs_output and pushing data directives up call tree. This is all bit-for-bit. larson-group/clubb#869 — Gunther Huebler / githubweb
516. Making some data copying regions asyncronous with compute regions, improving performance. This is bit-for-bit. larson-group/clubb#869 — Gunther Huebler / githubweb
517. I changed the dummy argument 'value' in the 'stat_update_var' subroutine from explicit to assumed size. #874 — nselke / githubweb
518. I added the new l_update_pressure configurable flag to clubb_config_flags. — bmg2 / githubweb
519. I added some code I used in the special input fields branch to make — bmg2 / githubweb
520. An improved NaN-Inf checker. It is based on IEEE_ARITHMETIC. (issue#875)[https://github.com/larson-group/clubb/issues/875] — guozhun / githubweb
521. I revert the changes from commit 'fbcbd86' from February 14th 2020 to resolve an issue with SAM CLUBB. For details see #874. — nselke / githubweb
522. I got rid of the "allocatable", "allocate", and "deallocate" statements — bmg2 / githubweb
523. I placed an ifndef CLUBB_CAM preprocessor flag around the code in — bmg2 / githubweb
524. I reduced the minimum possible value of lmin from 4.0 to 1.0. — noreply / githubweb
525. I made a print/write statement debug level 3 — noreply / githubweb
526. I made a second print/write statement debug level 3 — noreply / githubweb
527. I fix a print/write statement debug level3. For #755 and #800 — guozhun / githubweb
528. I am replacing the "use" statements that referenced — bmg2 / githubweb
529. I "brought back the stats" by passing the stats from advance_clubb_core — bmg2 / githubweb
530. Removing the reference to variables_diagnostic_module (sigma_sqd_w_zt and rtm_ref) — bmg2 / githubweb
531. Results were changed yesterday for some cases because thlprcp was — bmg2 / githubweb
532. I have resolved all the issues surrounding recent CLUBB commits that — bmg2 / githubweb
533. I removed code that stops a run if the output time step is less than a minute. — noreply / githubweb
534. I removed references to variables_prognostic_module and — bmg2 / githubweb
535. Fixed a boo-boo. — bmg2 / githubweb
536. I set `l_diag_Lscale_from_tau = .true.` in source code — noreply / githubweb
537. I removed references to variable_diagnostic_module for various Kessler — bmg2 / githubweb
538. I removed the reference to use variables_diagnostic_module for Kh_zm — bmg2 / githubweb
539. Removed a reference to variables_diagnostic_module for Kh_zm in — bmg2 / githubweb
540. I am able to remove references to variables_prognostic_module and — bmg2 / githubweb
541. I removed the l_use_ice_latent flag from the code, and along with it — bmg2 / githubweb
542. I have completed the project of removing variables_prognostic_module — bmg2 / githubweb
543. I added some missing threadprivate statements — noreply / githubweb
544. I have taken the code from wp2_term_ta_all and placed it in the subroutine — bmg2 / githubweb
545. I am updating wp3_term_ta_new_pdf_lhs to use the optimized code from — bmg2 / githubweb
546. This commit is BIT_CHANGING.  It makes the parameter values in parameters_tunable.F90 agree with those in tunable_parameters.in — benjamin.andrew.stephens / githubweb
547. I am making the change of using tau_wp2_zm to damp up2 and vp2, — bmg2 / githubweb
548. I have added the integer flags iiPDF_type and ipdf_call_placement — bmg2 / githubweb
549. I am going to make primary PDF type options and primary PDF call — bmg2 / githubweb
550. I added E3SM customizations to CLUBB's master branch.  This is meant — bmg2 / githubweb
551. I am updating the clubb_ list of namelist parameters used in E3SM — bmg2 / githubweb
552. Typo — bmg2 / githubweb
553. Fixed more typos — bmg2 / githubweb
554. I am changing the new hybrid PDF's calculation of F_w to use — bmg2 / githubweb
555. I updated the xp3 calculation for PDF types other than ADG1. — bmg2 / githubweb
556. This xp3_coef_ parameters produce new hybrid PDF results similar to the old — bmg2 / githubweb
557. I added the 2 new parameters in the simple xp3 equation (for PDF — bmg2 / githubweb
558. I have combined the wp3_term_ta_ADG1_lhs and wp3_term_ta_ADG1_lhs_all — bmg2 / githubweb
559. I added the partially upwinded implementation of the wp3 turbulent advection — bmg2 / githubweb
560. Removed unused module imports — isenfireldc / githubweb
561. Removed unused module imports — isenfireldc / githubweb
562. Removed a comma that I missed while removing unused imports (#878) — isenfireldc / githubweb
563. I am adding l_partial_upwind_wp3 to the list of clubb_config_flags. — bmg2 / githubweb
564. Deprecating use of l_Lscale_vert_avg in SILHS. This is causing problems with the GPUization efforts, described in larson-group/cam#129 — Gunther Huebler / githubweb
565. I started the process of paring 2 subprograms back down to 1 in — bmg2 / githubweb
566. I pared two more sets of equivalent subprograms down to 1 (each). — bmg2 / githubweb
567. Paring down 2 equivalent subprograms to 1 again. — bmg2 / githubweb
568. I condensed two more sets of doubled subprograms down to 1 (each) — bmg2 / githubweb
569. Reduced two more sets of "doubled" subprograms down. — bmg2 / githubweb
570. Updating silhs to prepare the column loop commit. This is being committed seperately because it is BIT_CHANGING, due to the way we are initializing the random number generator on CPUs. larson-group/cam#129 — Gunther Huebler / githubweb
571. Adding column loop index to silhs, and pushing loops down to allow parallelization over the column index. This requries changing the api, but it is bit-for-bit running on both gpus and cpus. larson-group/cam#129 — Gunther Huebler / githubweb
572. I updated CLUBB's copyright date range. — noreply / githubweb
573. Adding interface in silhs_api to distinguish single vs multiple comulmn calls. This seems to be a better solution than the previous attempt that broke the nightly tests. When calling silhs a single column at a time, the api will copy the single column data into arrays with a grid column index, allowing us to leave the host models the same. larson-group/cam#129 — Gunther Huebler / githubweb
574. Removed unused parameters [-Wunused-parameter] — isenfireldc / githubweb
575. Removed unused parameters [-Wunused-parameter] — isenfireldc / githubweb
576. Taking more duplicated subprograms and paring them down to 1. — bmg2 / githubweb
577. Replaced real checks with an epsilon approach [-Wcompare-reals] — isenfireldc / githubweb
578. Replaced real checks with an epsilon approach [-Wcompare-reals] — isenfireldc / githubweb
579. Removed unused imports [-Wunused-parameter] — isenfireldc / githubweb
580. Removed unused imports [-Wunused-parameter] — isenfireldc / githubweb
581. Removed styleguide violations from my code — isenfireldc / githubweb
582. Fixed a backwards epsilon comparison from 8e8e71e — isenfireldc / githubweb
583. Removed the "doubling" of the remainder of the subprograms from — bmg2 / githubweb
584. Changing epsilon used in equality comparison. The previous epsilon seems to be too large, and was causing failures in runs. larson-group/clubb#878 — Gunther Huebler / githubweb
585. Small changes to generate_all_uniform_samples. I was encountering a gpu problem with this code when run in cam. I'm not certain why this is an issue, but this changes fixes it and is bit-for-bit on both cpus and gpus. larson-group/cam#129 — Gunther Huebler / githubweb
586. Changed the length of solve_type_str to 20 [-Wcharacter-trucation] — isenfireldc / githubweb
587. Removed unused arguments [-Wunused-dummy-argument] — isenfireldc / githubweb
588. Removed unused arguments [-Wunused-dummy-argument] — isenfireldc / githubweb
589. Removed unused variables [-Wunused-variable] — isenfireldc / githubweb
590. Removed unused variables [-Wunused-variable] — isenfireldc / githubweb
591. I have tidied up advance_wp2_wp3_module.F90, and I have removed all doubled — bmg2 / githubweb
592. Removed continue and undid edits to _api fuction signatures — isenfireldc / githubweb
593. Removed continue and undid edits to _api fuction signatures — isenfireldc / githubweb
594. I handled the "doubled" subprograms in turbulent_adv_pdf.F90. — bmg2 / githubweb
595. Making change explained in larson-group/clubb#878 — Gunther Huebler / githubweb
596. Removed some unused variables (ifort) — isenfireldc / githubweb
597. Removed some unused variables (ifort) — isenfireldc / githubweb
598. Adding functionality to pass in a seed for the random number generator. This allows CPU restart runs to function correctly. Because this also changes the seed, this is BIT_CHANGING. larson-group/cam#129 — Gunther Huebler / githubweb
599. Removed unused import [-Wunused-variable] — isenfireldc / githubweb
600. Removes unused function calc_cloud_frac [-Wunused-function] — isenfireldc / githubweb
601. Fixes style issue — isenfireldc / githubweb
602. Removed import without only as it was unused — isenfireldc / githubweb
603. Adds mpishorthand back with only, it appears to be used somewhere — isenfireldc / githubweb
604. I have pared two subprograms down to one again, this time for the — bmg2 / githubweb
605. I pared down subprogram pairs again, this time for mean advection. — bmg2 / githubweb
606. I added altitude_threshold to the list of CLUBB's tunable parameters. — bmg2 / githubweb
607. Updating clubb variables to output their var_description in the form '[variable name using sci notation], [Textual descirption]' in an effort to provide more standardized titles for pyplotgenplots. — strike / githubweb
608. Updating previous commit to not have lines over 100 characters. This commit shouldn't be BIT_CHANGING, but the previous commit was (and was supposed to be). — strike / githubweb
609. Adds more debug lines — isenfireldc / githubweb
610. Removes debug lines — isenfireldc / githubweb
611. Adds debug lines and changes format — isenfireldc / githubweb
612. Modifies debug line — isenfireldc / githubweb
613. Modifies debug line — isenfireldc / githubweb
614. Initialize ncf%ntimes to 0 when opening netcdf for writing — isenfireldc / githubweb
615. Removes debug lines — isenfireldc / githubweb
616. Changes length of units variable in stat_file_module from 20 to 25 — isenfireldc / githubweb
617. This commit resolves issue #885 and gets the 2D output working, if the relevant flags are set to true.  A duplicated allocate statement is eliminated, and to ensure that the 2D output occurs at the right intervals (every stats_tout seconds) I have also added approrpiate if statements at the beginning of the 2D output subroutines. — benjamin.andrew.stephens / githubweb
618. Adding API subroutines for latin_hypercube_2D_output and latin_hypercube_2D_close.  This will aid in implementing the SILHS 2D output subroutines in host models.  The new API subroutines necessitated some minor changes in clubb_driver.F90 as well.  Mainly relevant to https://github.com/larson-group/wrf/issues/110 (WRF repo), but see also #885 (CLUBB repo). — benjamin.andrew.stephens / githubweb
619. I updated the stats code in setup_clubb_pdf_params.F90 and in — bmg2 / githubweb
620. I updated the stats code in setup_clubb_pdf_params.F90 and in — bmg2 / githubweb
621. This commit primarily overhauls the way the 2D SILHS samples are output to netCDF.  Now, instead of being output along the latitude dimension in a 4d netCDF file, the SILHS samples are output along the "lh_sample_number" dimension of a 5d netCDF file.  Furthermore the lat/lon dimensions of the 2D SILHS sample files are now output with the correct lat/lon information. — benjamin.andrew.stephens / githubweb
622. This commit primarily overhauls the way the 2D SILHS samples are output to netCDF.  Now, instead of being output along the latitude dimension in a 4d netCDF file, the SILHS samples are output along the "lh_sample_number" dimension of a 5d netCDF file.  Furthermore the lat/lon dimensions of the 2D SILHS sample files are now output with the correct lat/lon information. — benjamin.andrew.stephens / githubweb
623. Undoing accidental find and replace. larson-group/cam#129 — Gunther Huebler / githubweb
624. Updated titles listed for change here: https://github.com/larson-group/sys_admin/issues/542#issuecomment-685963832 — nchief / githubweb
625. Fix super serious 1 character bug that broke all of the things — strike / githubweb
626. I am committing Zhun's changes to the CLUBB portion of his — bmg2 / githubweb
627. Update stats_zm_module.F90 — noreply / githubweb
628. I added Cx_min, Cx_max, Richardson_num_min, and Richardson_num_max — bmg2 / githubweb
629. I connected the new tunable parameters to advance_helper_module.F90. — bmg2 / githubweb
630. I added l_use_shear_Richardson to CLUBB's configurable model flags. — bmg2 / githubweb
631. Adding linear multistep method (LMM) stepping flag (l_lmm_stepping) to provide capability of overstepping-and-then-averaging results from advance_wp2_wp3, advance_xm_xpwp, and advance_xp2_xpyp.  This is intended to help smooth high-frequency oscillations.  Flag is set to false by default so has no impact on standard runs. — benjamin.andrew.stephens / githubweb
632. In order to prevent dycoms2_rf02_so from crashing, — Vince Larson / githubweb
633. I updated the recording of the budget terms for upwp_pr4 and vpwp_pr4. — Vince Larson / githubweb
634. Adding the smooth_min and smooth_max functions to the repo.  These are not yet implemented in CLUBB but are now available for use and testing. See issue #894. — benjamin.andrew.stephens / githubweb
635. Adding some comments describing zm and zt for the new interface functions, and fixing a problem in the "array_sclr" versions of the functions.  See issue #894. — benjamin.andrew.stephens / githubweb
636. Modifying some array dimensions to speed up multiply_Cholesky. This cuts the cost of multiply_Cholesky by about 60% in cam but only about 15% in clubb_standalone. larson-group/cam#129 — Gunther Huebler / githubweb
637. This commit replaces division by tau with multiplication by inverse tau in most cases.  It is BIT_CHANGING, not only because the results change (only very slightly in some cases, but more significantly in sensitive cases like ARM_97, RICO, etc.) but also because some of the old tau_*_zm or tau_*_zt output variables are replaced with invrs_tau_* variables, hence the netcdf files will differ and there are minor changes to stats input files.  Spurious source test also needed to be slightly modified to accommodate a new variable fed into the advance_xm_wpxp subroutine. — benjamin.andrew.stephens / githubweb
638. I am committing a bug fix to the invrs_tau_zm equation that was — bmg2 / githubweb
639. CLUBB and pyplotgen changes: — benjamin.andrew.stephens / githubweb
640. I fixed the LMM stepping bug that was affecting E3SM (because — bmg2 / githubweb
641. Fixed alignment. — bmg2 / githubweb
642. This commit introduces a new flag, l_e3sm_config, which enables the user to switch on or off some of the changes introduced in connection with the E3SM merge (see commit https://github.com/larson-group/clubb/commit/cf5b2e4b80d8bd3ca411b9b5e6d5a2afece04795). It also introduces two new tunable parameters, C_invrs_tau_wpxp_Ri and C_invrs_tau_wpxp_N2_thresh, to replace two "magic numbers" in the code.  The primary code changes are in advance_clubb_core_module.F90. — benjamin.andrew.stephens / githubweb
643. Update parameter_indices.F90 — noreply / githubweb
644. Update model_flags.F90 — noreply / githubweb
645. Adding new flag that allows the user to implement the TKE formulation of the wp3 C15 term (known currently as bp2, but ultimately will be called pr3).  See issue #884. — benjamin.andrew.stephens / githubweb
646. Separating out the parameter C5 into C_uu_shr and C_uu_buoy, consistent with the formalism of Mironov and Machulskaya 2017. C5 has been effectively renamed C_uu_shr, and a new parameter C_uu_buoy has been introduced.  See https://github.com/larson-group/clubb/issues/901. — benjamin.andrew.stephens / githubweb
647. I am now passing vert_decorr_coef into SILHS instead of involving — bmg2 / githubweb
648. This commits further updates related to splitting the parameter C5 into C_uu_shr and C_uu_buoy (see this commit: https://github.com/larson-group/clubb/commit/3f75a27dd94673a2b8603c24b989da106e759b39).  Changes include correcting one instance where C_uu_shr was passed to a function when C_uu_buoy should've been passed, and also now applying the changes to up2 and vp2, which was overlooked before.  I've also updated the comments to remove, where appropriate, references to "C_5" that were missed before (in a few places I have left the C_5 in place but included a note indicating that it has now been broken up). — benjamin.andrew.stephens / githubweb
649. Adding a test to make sure new C_uu_buoy parameter is within the valid range. See #901. — benjamin.andrew.stephens / githubweb
650. This commit renames the wp3 budget term from "bp2" to "pr_turb", and renames the related parameter "C15" to "C_wp3_turb".  The majority of files changed are supplemental files such as postprocessing files for plotgen and pyplotgen and tuner files and input files. — benjamin.andrew.stephens / githubweb
651. This will allow for a better interface of SILHS parameter — bmg2 / githubweb
652. Fixed a preprocessor command. — bmg2 / githubweb
653. I'm adding the api entry for read_silhs_parameters, called — bmg2 / githubweb
654. Revert "I'm adding the api entry for read_silhs_parameters, called" — bmg2 / githubweb
655. Revert "Fixed a preprocessor command." — bmg2 / githubweb
656. Revert "This will allow for a better interface of SILHS parameter" — bmg2 / githubweb
657. I updated silhs_api_module so that vert_decorr_coef is publically available — bmg2 / githubweb
658. Incorporating Shixuan Zhang's and Chris Vogl's "l_godunov_upwind_wpxp_ta" flag and related code.  The flag is set to false by default so results are unaffected.  See #902. — benjamin.andrew.stephens / githubweb
659. Updating advance_xm_wpxp_module so that the upwp_pr4 term uses the parameter C_uu_shr instead of the hard-coded value 0.7. Also updating the value of C_uu_shr from 0.3 to 0.4 after testing priority-cases with the new upwp_pr4 term. — benjamin.andrew.stephens / githubweb
660. Moving the acc update host directive to after the wait directives in silhs. Since silhs runs with asyncronous kernel calls the update was occasionally happening before some clipping was finished, causing problems in assert_correct_cloud_normal. This is only a problem when compiling with OpenACC enabled, so it should be bit identical for all our tests. larson-group/cam#129 — Gunther Huebler / githubweb
661. Update parameters_tunable.F90 — noreply / githubweb
662. Reording vertical and subcolumn dimensions in SILHS. This is BIT_CHANING in some cases, seemly due to an outputting error for the precip_rate field, but plotted results are identical. larson-group/cam#129 — Gunther Huebler / githubweb
663. Changing dimension order of rand_pool to make consistent with previous reorderings. This is BIT_CHANGING for silhs cases since it changes the order in which random numbers are used. larson-group/cam#129 — Gunther Huebler / githubweb
664. Changes non-success `stop` statements to `error stop` — Vince Larson / githubweb
665. Changes non-success `stop` statements to `error stop` — Vince Larson / githubweb
666. Adding Shixuan's godunov_xpyp_ta updates here in case we want to merge them into our master branch.  See #902. — 59519056+bstephens82 / githubweb
667. Turning on wp3 pr_turb term. — benjamin.andrew.stephens / githubweb
668. Changed the variable up2_vp2_factor to up2_sfc_coef in all files — rhodesk / githubweb
669. I added an option to improve dry, convecting boundary layers. — Vince Larson / githubweb
670. This commit switches the names, but not the values, of the dp1 and pr1 variables for up2 and vp2.  In other words, up2_dp1 <---> up2_pr1 and vp2_dp1 <---> vp2_pr1.  This makes the terms in these equations more consistent with the terms in the wp2 equation.  I believe this commit is BIT_CHANGING since it will affect the values of these variables even though the nightly plot profiles should not change (but the budget plots would have these lines swapped). — Vince Larson / githubweb
671. Changed surface to sfc in all instances where requested — rhodesk / githubweb
672. Undid sfc change in stats_sfc_module.F90 — noreply / githubweb
673. Undid sfc change to grid_class.F90 — noreply / githubweb
674. Undid sfc change in numerical_check.F90 — noreply / githubweb
675. Pushing grid column loop into setup_pdf_params. Adding iterface too, allowing us to call it with single or multiple columns so that the host models don't need updating to work with this change. This is bit-for-bit, tested with clubb_standalone and cam coarse res run. larson-group/cam#129 — Gunther Huebler / githubweb
676. Broke up column loop inside setup_pdf_params. This is all bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
677. Fixed typo bug. larson-group/cam#129 — Gunther Huebler / githubweb
678. Pushed down some more loops in setup_pdf_params. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
679. More pushing loops down. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
680. More loop pushing. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
681. More loop pushing. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
682. Adding comments explaining why component_corr_x_hm_n_ip uses corr_array_n_cloud twice. larson-group/cam#129 — Gunther Huebler / githubweb
683. More loop pushing, all bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
684. Adding one_half to use statement. This was a bug preventing compilation when using the ifort compiler with the MKL functions. — Gunther Huebler / githubweb
685. Moving use statement for one_half inside ifdef, since it is only needed if compilation with MKL functions is enabled. — Gunther Huebler / githubweb
686. Reducing the number of calls to Cholesky_factor. This is bit-for-bit for all standalone cases and our coarse res version of cam. larson-group/cam#129 — Gunther Huebler / githubweb
687. Reordering dimensions of mu, sigma, corr_arrays, and cholesky matrices. This makes the dimension ordering more consistent with similar arrays and should help to reduce computational cost by reducing array slicing. This is all bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
688. Reordering dimensions of mu, sigma, corr_arrays, and cholesky matrices. This makes the dimension ordering more consistent with similar arrays and should help to reduce computational cost by reducing array slicing. This is all bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
689. Performance improvements from chaning loop orderings and redundant operation reduction. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
690. Reordering dimensions on some arrays. This is bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
691. Reducing operations. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
692. Adding 2D subroutine versions of some functions to improve performance. This is all bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
693. Some small cleanup, all just formatting. larson-group/cam#129 — Gunther Huebler / githubweb
694. Changed ustar from an array to a scalar issue #909 — rhodesk / githubweb
695. Renamed Ri_zm to sqrt_Ri_zm and iRi_zm to isqrt_Ri_zm #909 — rhodesk / githubweb
696. Created new subroutine and ensured it's BFB. All cases run sucessfully #909 — rhodesk / githubweb
697. added in missing flag which was causing memory errors #909 — rhodesk / githubweb
698. confirmed BFB with e3sam flag set to false and true, no other issues detected in mixing_length #909 — rhodesk / githubweb
699. Update stats_zm_module.F90 — noreply / githubweb
700. Adding dummy dimensions to calls to procedures that operate over 2 dimensions now, and remove 1D versions of those procedures. larson-group/cam#129 — Gunther Huebler / githubweb
701. Separating precip fractions from hyrdromet_pdf_params and creating a type of it's own for it. This is bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
702. Separating precip fractions from hyrdromet_pdf_params and creating a type of it's own for it. This is bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
703. Formatting and condensing if statements. All bit-for-bit. larson-group/cam#129 — Gunther Huebler / githubweb
704. Making hydromet_pdf_params optional in setup_pdf_parameters. larson-group/cam#129 — Gunther Huebler / githubweb
705. Reformatted mixing length to be more compliant with the coding standard #909 — rhodesk / githubweb
706. added a reference to new subroutine #909 — rhodesk / githubweb
707. Adding second dimension to allocatable arrays in pdf_parameter type. This also requires lots of dummy dimensions in clubb where pdf_params is used, since clubb only works over a single column, but silhs does not need such a dummy dimension. larson-group/cam#129 — Gunther Huebler / githubweb
708. Adding second dimension to allocatable arrays in pdf_parameter type. This also requires lots of dummy dimensions in clubb where pdf_params is used, since clubb only works over a single column, but silhs does not need such a dummy dimension. larson-group/cam#129 — Gunther Huebler / githubweb
709. Fixing lines that exceed 100 characters. — Gunther Huebler / githubweb
710. Fixing lines that exceed 100 characters. — Gunther Huebler / githubweb
711. Pushing loops related to pdf_params down. larson-group/cam#129 — Gunther Huebler / githubweb
712. clubb warnings introduced from merge have been removed #909 — rhodesk / githubweb
713. Changed safeguard threshold in sigma_sqd_w. — rhodesk / githubweb
714. Adding some new code that puts the diffusion term d(wp2*em)/dz into a new function, creates a new wp3 budget term (wp3_pr_dfsn), and adds that new budget term to pyplotgen. — 59519056+bstephens82 / githubweb
715. Adding new coefficient to control the wp3 pressure diffusion term. — 59519056+bstephens82 / githubweb
716. Some minor updates to advance_wp2_wp3 relevant to the pr_turb and pr_dfsn terms. — 59519056+bstephens82 / githubweb
717. Converting em*d(em)/dz to d(em^2)/dz in the wp3_pr_turb term and fixing a typo. — 59519056+bstephens82 / githubweb
718. Renaming C_wp3_turb --> C_wp3_pr_turb (BIT_CHANGING due to name change in netcdf output). — 59519056+bstephens82 / githubweb
719. These changes add the new fourth-order moment variables wp2up2 and wp2vp2 to the CLUBB code. This requires a new function in pdf_closure_module since they must be calculated separately with a new formula, and they are fed through into advance_wp2_wp3 for use with the pr_dfsn subroutine. They are also added to the standard stats file and will be output to netcdf, hence this commit is BIT_CHANGING. — 59519056+bstephens82 / githubweb
720. Putting the wp3_pr_turb formulation back to its d(rho*wp2*em)/dz form.  This would be a BIT_CHANGING commit since it would change the answers for the pr_turb term. However once this branch is merged into the master branch, results should be bit-for-bit since this term was only modified in the alternate branch. — 59519056+bstephens82 / githubweb
721. Added intent comments for the following files: — rhodesk / githubweb
722. Removing "if" statement around calculation of wp4 in pdf_closure_module.F90 and the same "if" statement around some further manipulation of wp4 in advance_clubb_core.  Results are bit-for-bit with this change, since normally all cases calculate wp4 anyway since the "if" condition was always satisfied in normal runs (but not, for example, in some tuning runs).  This was done because the new wp3_pr_dfsn term needs wp4 in its current formulation so it needs to always be calculated. — benjamin.andrew.stephens / githubweb
723. Removing some "use" statement variables from advance_clubb_core, since they are no longer used here but are now used in mixing_length.F90. — benjamin.andrew.stephens / githubweb
724. Fixed comment regarding wp3 splatting term. — benjamin.andrew.stephens / githubweb
725. Added intent comments. — rhodesk / githubweb
726. Added intent comments. — rhodesk / githubweb
727. Added intent comments for advance_xp2_xpyp_module.F90. — rhodesk / githubweb
728. Makes surface clipping of wp3 consistent with clipping aloft, per #921. This is BIT_CHANGING since it affects how clipping is applied near the surface. — 59519056+bstephens82 / githubweb
729. Deleting comments around the old "magic number" for the near-surface clipping. — 59519056+bstephens82 / githubweb
730. Fixing fortran standards violation causing compiler errors with nvfortran. See larson-group/clubb#900 and larson-group/clubb#928. — Gunther Huebler / githubweb
731. Changed some elements of clubb to allow for better script execution — rhodesk / githubweb
732. Fixed clubb not compiling — rhodesk / githubweb
733. Feeding gr through the arg list where need only in the CLUBB_core dir. — rhodesk / githubweb
734. Feeding gr through the arg list where need only in the CLUBB_core dir. — rhodesk / githubweb
735. Reverted changes to clubb_api. For #886 — rhodesk / githubweb
736. Replacing use gr statements with feeding gr throught the arg list. — rhodesk / githubweb
737. Adding proper indentation to needed files. — rhodesk / githubweb
738. Fixing spacing issue on blank lines. #886 — rhodesk / githubweb
739. Fixed comment changes. #886 — rhodesk / githubweb
740. Fixed incorrect spacing on use — rhodesk / githubweb
741. Revert "Fixed incorrect spacing on use" — rhodesk / githubweb
742. Fixed spacing — rhodesk / githubweb
743. Fixed spacing going too far — rhodesk / githubweb
744. Fixed comments being pushed over — rhodesk / githubweb
745. Fixed not all variables being indented properly — rhodesk / githubweb
746. Fixed indentation going beyond variables — rhodesk / githubweb
747. Fixed file_functions indentation being off — rhodesk / githubweb
748. Fixed indentation on operations being wrong — rhodesk / githubweb
749. Reverted incorrect changes to new_pdf and new_hybrid_pdf — rhodesk / githubweb
750. Fixed spacing issue when adding in gr. BFB identical. For #886. — rhodesk / githubweb
751. Fixed spacing issue when adding in gr. BFB identical. For #886. — rhodesk / githubweb
752. Removing gr as a module variable from grid_class. — rhodesk / githubweb
753. Removing gr as a module variable from grid_class. — rhodesk / githubweb
754. Fixing typo in stats_zm_module.F90.  Background:  Since this commit https://github.com/larson-group/clubb/commit/466c5383fa5c0cc85316c6d117826974a5e2e0a3# in August 2020 the upwp budget lines in Pyplotgen have not appeared to be balanced for any cases.  It turns out the reason is that a comma and space were added to the upwp_tp variable name in stats_zm_module.F90 in the August 2020 commit.  This unusual naming causes pyplotgen not to recognize this variable, so it doesn't get plotted and the lines appear unbalanced.  However, since the budget balance test still found the variable, it kept passing successfully.  This commit will fix the issue with the pyplotgen plotting by reverting the name to the standard format. — benjamin.andrew.stephens / githubweb
755. Fixing a typo from an earlier commit. — noreply / githubweb
756. Feeding gr through arg list for functions outside of CLUBB_core. — rhodesk / githubweb
757. Feeding gr through arg list for functions outside of CLUBB_core. — rhodesk / githubweb
758. Moving 'gr' from front of arg list when being used as intent(inout) to conform to standard. #886. BFB. — rhodesk / githubweb
759. The purpose of this commit is to see whether or not causing changes in sam's version of clubb will cause errors when the master branch of clubb gets merged intosam. Please ignore this commit unless everything breaks, in which case this is the reason why everything is broken. — rhodesk / githubweb
760. Add error header for CLUBB in CAM — noreply / githubweb
761. Fixing the ordering of gr in the clubb_api arg list for affected subroutines. — rhodesk / githubweb
762. Fixing coding standard violations — rhodesk / githubweb
763. Improving error messages in setup_clubb_core. larson-group/e3sm#38 — Gunther Huebler / githubweb
764. Feeding stats variables through the argument lists of needed subroutines. — 72510114+RhodesKeegan / githubweb
765. Feeding stats variables through the argument lists of needed subroutines. — 72510114+RhodesKeegan / githubweb
766. Fixing spacing issues along with placing the stats varibales on their own lines. — 72510114+RhodesKeegan / githubweb
767. Fixing spacing issues along with placing the stats varibales on their own lines. — 72510114+RhodesKeegan / githubweb
768. Changing more subroutines to include stats vars in their arg lists. — 72510114+RhodesKeegan / githubweb
769. Changing more subroutines to include stats vars in their arg lists. — 72510114+RhodesKeegan / githubweb
770. Fixing incorrect subroutine arg list — 72510114+RhodesKeegan / githubweb
771. Fixing incorrect subroutine arg list — 72510114+RhodesKeegan / githubweb
772. Fixing host models not compiling. — 72510114+RhodesKeegan / githubweb
773. Fixing host models not compiling. — 72510114+RhodesKeegan / githubweb
774. Fixing argument list so that way the coding standard is upheld. — 72510114+RhodesKeegan / githubweb
775. Fixing argument list so that way the coding standard is upheld. — 72510114+RhodesKeegan / githubweb
776. I changed the name to calc_responder_driver because I thought that — bmg2 / githubweb
777. I changed the name to calc_responder_driver because I thought that — bmg2 / githubweb
778. Code changes to introduce wp2_pr_dfsn, the wp2 pressure diffusion term, consistent with Lumley 1978.  Related to #920. — 59519056+bstephens82 / githubweb
779. Code changes to introduce wp2_pr_dfsn, the wp2 pressure diffusion term, consistent with Lumley 1978.  Related to #920. — 59519056+bstephens82 / githubweb
780. Fixing comment for the wp2_term_pr_dfsn subroutine.  Related to #920. — 59519056+bstephens82 / githubweb
781. Fixing comment for the wp2_term_pr_dfsn subroutine.  Related to #920. — 59519056+bstephens82 / githubweb
782. Updating wp3 pressure diffusion term to be consistent with the Lumley 1978 formula for the perturbation pressure. For #920. — 59519056+bstephens82 / githubweb
783. Updating wp3 pressure diffusion term to be consistent with the Lumley 1978 formula for the perturbation pressure. For #920. — 59519056+bstephens82 / githubweb
784. Making requested changes to the wp2 pressure diffuion additions, including correcting some grid-level related issues.  Related to #920. — 59519056+bstephens82 / githubweb
785. Making requested changes to the wp2 pressure diffuion additions, including correcting some grid-level related issues.  Related to #920. — 59519056+bstephens82 / githubweb
786. Fixing some comments. — 59519056+bstephens82 / githubweb
787. Fixing some comments. — 59519056+bstephens82 / githubweb
788. Correcting a typo bug and adding some descriptive comments to two new variables.  This is a BIT_CHANGING commit becuase it will affect the newly calculated variables and descriptions in the output files, but it won't affect any plotted results. Related to #920. — benjamin.andrew.stephens / githubweb
789. Correcting a typo bug and adding some descriptive comments to two new variables.  This is a BIT_CHANGING commit becuase it will affect the newly calculated variables and descriptions in the output files, but it won't affect any plotted results. Related to #920. — benjamin.andrew.stephens / githubweb
790. Passing stats through needed subroutines — 72510114+RhodesKeegan / githubweb
791. Fixing compiliation errors — 72510114+RhodesKeegan / githubweb
792. Fixing compiliation errors — 72510114+RhodesKeegan / githubweb
793. Fixing compiliation errors — 72510114+RhodesKeegan / githubweb
794. Fixing compiliation errors — 72510114+RhodesKeegan / githubweb
795. Removing updated clubb and silhs directories — 72510114+RhodesKeegan / githubweb
796. Fixing coding standard — 72510114+RhodesKeegan / githubweb
797. Moving the stats variables to module variables of clubb_driver. — 72510114+RhodesKeegan / githubweb
798. Moving the stats variables to module variables of clubb_driver. — 72510114+RhodesKeegan / githubweb
799. Moving the stats variables to module variables of clubb_driver. — 72510114+RhodesKeegan / githubweb
800. Moving the stats variables to module variables of clubb_driver. — 72510114+RhodesKeegan / githubweb
801. Fixing coding standard viloation of lines exceeding 100 characters. — rhodesk / githubweb
802. Fixing coding standard viloation of lines exceeding 100 characters. — rhodesk / githubweb
803. Fixing coding standard viloation of lines exceeding 100 characters. — rhodesk / githubweb
804. Fixing coding standard viloation of lines exceeding 100 characters. — rhodesk / githubweb
805. Adding wp3_pr_tp (aka "negative nose" term) to wp3 equation.  Related to #920. — 59519056+bstephens82 / githubweb
806. Adding wp3_pr_tp (aka "negative nose" term) to wp3 equation.  Related to #920. — 59519056+bstephens82 / githubweb
807. Changing the way the new wp3_pr_tp term works, by generalizing the wp3_terp_pr_lhs subroutine.  Also cleaning up comments and changing the description of the wp3_pr_tp variable in the netcdf output files, hence this commit is BIT_CHANGING, although it will not affect numerical results since the wp3_pr_tp coefficient (C_wp3_pr_tp) is set to zero. — 59519056+bstephens82 / githubweb
808. Changing the way the new wp3_pr_tp term works, by generalizing the wp3_terp_pr_lhs subroutine.  Also cleaning up comments and changing the description of the wp3_pr_tp variable in the netcdf output files, hence this commit is BIT_CHANGING, although it will not affect numerical results since the wp3_pr_tp coefficient (C_wp3_pr_tp) is set to zero. — 59519056+bstephens82 / githubweb
809. Removing l_interp_prescribed_params from setup_clubb_pdf_params. — rhodesk / githubweb
810. Removing l_interp_prescribed_params from setup_clubb_pdf_params. — rhodesk / githubweb
811. Adding comments labeling subroutine calls with intent. — rhodesk / githubweb
812. Adding comments labeling subroutine calls with intent. — rhodesk / githubweb
813. Removing mentions of /home/pub. larson-group/sys_admin#735 — pbroels / githubweb
814. Adding intent labels for subroutines throughout clubb. — rhodesk / githubweb
815. Adding intent labels for subroutines throughout clubb. — rhodesk / githubweb
816. Removing unnecessary constant from use statement — noreply / githubweb
817. Removing unnecessary constant from use statement — noreply / githubweb
818. adding script — Gunther Huebler / githubweb
819. adding script — Gunther Huebler / githubweb
820. bit for bit — Gunther Huebler / githubweb
821. Adding jenkins file for bit diff test. larson-group/e3sm#38 — Gunther Huebler / githubweb
822. We do indded need to source those ifortvars. larson-group/e3sm#38 — Gunther Huebler / githubweb
823. Eliminating l_nu_grid_dependent as requested. — rhodesk / githubweb
824. Eliminating l_nu_grid_dependent as requested. — rhodesk / githubweb
825. Eliminating l_use_buoy_mod_Km_zm. — rhodesk / githubweb
826. Eliminating l_use_buoy_mod_Km_zm. — rhodesk / githubweb
827. Eliminating l_iter_xp2_xpyp flag. — rhodesk / githubweb
828. Eliminating l_iter_xp2_xpyp flag. — rhodesk / githubweb
829. Eliminating l_apply_rule_to_pdf_params flag. — rhodesk / githubweb
830. Eliminating l_apply_rule_to_pdf_params flag. — rhodesk / githubweb
831. Eliminating l_ub_const_deriv flag. — rhodesk / githubweb
832. Eliminating l_ub_const_deriv flag. — rhodesk / githubweb
833. Eliminating l_equation_21 flag. — rhodesk / githubweb
834. Eliminating l_equation_21 flag. — rhodesk / githubweb
835. Eliminating l_wp3_2nd_buoyancy flag. — rhodesk / githubweb
836. Eliminating l_wp3_2nd_buoyancy flag. — rhodesk / githubweb
837. Eliminating l_refine_grid_in_cloud and l_interactive_refined. — rhodesk / githubweb
838. Eliminating l_refine_grid_in_cloud and l_interactive_refined. — rhodesk / githubweb
839. Eliminating l_use_experimental_term_pr2 and l_use_vert_avg_winds — rhodesk / githubweb
840. Eliminating l_use_experimental_term_pr2 and l_use_vert_avg_winds — rhodesk / githubweb
841. Eliminating l_use_wp3_pr3 flag. — rhodesk / githubweb
842. Eliminating l_use_wp3_pr3 flag. — rhodesk / githubweb
843. Eliminating l_clip_semi_implicit flag. — rhodesk / githubweb
844. Eliminating l_clip_semi_implicit flag. — rhodesk / githubweb
845. Adding intent labels for subroutines throughout clubb. — rhodesk / githubweb
846. Adding intent labels for subroutines throughout clubb. — rhodesk / githubweb
847. Adding script to diff netcdf 3D vars to compare outputs, improving set_up_cam_coarse_res.py and run_cesm_uwm_coarse_res.sh larson-group/e3sm#38 — Gunther Huebler / githubweb
848. Eliminating l_single_C2_Skw flag. — 72510114+RhodesKeegan / githubweb
849. Eliminating l_single_C2_Skw flag. — 72510114+RhodesKeegan / githubweb
850. Commiting to test host models — 72510114+RhodesKeegan / githubweb
851. Reverting clubb and silhs changes — 72510114+RhodesKeegan / githubweb
852. Eliminating l_include_ice and sat_ice_ratio. — rhodesk / githubweb
853. Updating jenkins files for new intel oneAPI, and adding remove output step for cam bit diff test. — Gunther Huebler / githubweb
854. Raw-copy updating src/physics/clubb — root / githubweb
855. Raw-copy updating src/physics/silhs — root / githubweb
856. Changing old ifort variable pathing script to the new version. — pbroels / githubweb
857. Eliminating l_update_pressure flag. — rhodesk / githubweb
858. Reflecting changes made to clubb in host models — rhodesk / githubweb
859. Raw-copy updating src/physics/clubb — LarsonGroupSysAdmin / githubweb
860. Reflecting changes made to clubb in host models — rhodesk / githubweb
861. Adding step to the cam jenkins test to display the logs for the build and run of each case. larson-group/sys_admin#735 — pbroels / githubweb