Console Output
+ gzip -d /home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo/run/cesm.log.220207-164930.gz
+ cat /home/jenkins/cam_output/scratch/ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo/run/cesm.log.220207-164930
[0] User-specified PIO rearranger comm max pend req (comp2io), 0 (value will be reset as requested)
[0] Resetting PIO rearranger comm max pend req (comp2io) to 64
[0] User-specified PIO rearranger comm max pend req (io2comp), 0 (value will be reset as requested)
[0] Resetting PIO rearranger comm max pend req (io2comp) to 64
[0] PIO rearranger options:
[0] comm type = p2p
[0] comm fcd = 2denable
[0] max pend req (comp2io) = 64
[0] enable_hs (comp2io) = T
[0] enable_isend (comp2io) = F
[0] max pend req (io2comp) = 64
[0] enable_hs (io2comp) = F
[0] enable_isend (io2comp) = T
[0] 1 pes participating in computation of coupled model
[0] --------------------------------------------------------------
[0] GLOBAL communicator : 1 nodes, 1 MPI tasks
[0] COMMUNICATOR NODE # [NODE NAME] : (# OF MPI TASKS) TASK # LIST
[0] GLOBAL NODE 0 [ nelson.math.uwm.edu ] : ( 1 MPI TASKS ) 0[0]
[0] --------------------------------------------------------------
[0] (seq_comm_setcomm) init ID ( 1 GLOBAL ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_setcomm) init ID ( 2 CPL ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_setcomm) init ID ( 5 ATM ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 6 CPLATM ) join IDs = 2 5 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 3 ALLATMID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 4 CPLALLATMID ) join IDs = 2 3 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 9 LND ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 10 CPLLND ) join IDs = 2 9 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 7 ALLLNDID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 8 CPLALLLNDID ) join IDs = 2 7 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 13 ICE ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 14 CPLICE ) join IDs = 2 13 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 11 ALLICEID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 12 CPLALLICEID ) join IDs = 2 11 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 17 OCN ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 18 CPLOCN ) join IDs = 2 17 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 15 ALLOCNID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 16 CPLALLOCNID ) join IDs = 2 15 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 21 ROF ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 22 CPLROF ) join IDs = 2 21 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 19 ALLROFID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 20 CPLALLROFID ) join IDs = 2 19 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 25 GLC ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 26 CPLGLC ) join IDs = 2 25 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 23 ALLGLCID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 24 CPLALLGLCID ) join IDs = 2 23 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 29 WAV ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 30 CPLWAV ) join IDs = 2 29 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 27 ALLWAVID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 28 CPLALLWAVID ) join IDs = 2 27 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 33 ESP ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 34 CPLESP ) join IDs = 2 33 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 31 ALLESPID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 32 CPLALLESPID ) join IDs = 2 31 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_setcomm) init ID ( 37 IAC ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
[0] (seq_comm_joincomm) init ID ( 38 CPLIAC ) join IDs = 2 37 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_jcommarr) init ID ( 35 ALLIACID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
[0] (seq_comm_joincomm) init ID ( 36 CPLALLIACID ) join IDs = 2 35 ( npes = 1) ( nthreads = 1)
[0] (seq_comm_printcomms) 1 0 1 1 GLOBAL:
[0] (seq_comm_printcomms) 2 0 1 1 CPL:
[0] (seq_comm_printcomms) 3 0 1 1 ALLATMID:
[0] (seq_comm_printcomms) 4 0 1 1 CPLALLATMID:
[0] (seq_comm_printcomms) 5 0 1 1 ATM:
[0] (seq_comm_printcomms) 6 0 1 1 CPLATM:
[0] (seq_comm_printcomms) 7 0 1 1 ALLLNDID:
[0] (seq_comm_printcomms) 8 0 1 1 CPLALLLNDID:
[0] (seq_comm_printcomms) 9 0 1 1 LND:
[0] (seq_comm_printcomms) 10 0 1 1 CPLLND:
[0] (seq_comm_printcomms) 11 0 1 1 ALLICEID:
[0] (seq_comm_printcomms) 12 0 1 1 CPLALLICEID:
[0] (seq_comm_printcomms) 13 0 1 1 ICE:
[0] (seq_comm_printcomms) 14 0 1 1 CPLICE:
[0] (seq_comm_printcomms) 15 0 1 1 ALLOCNID:
[0] (seq_comm_printcomms) 16 0 1 1 CPLALLOCNID:
[0] (seq_comm_printcomms) 17 0 1 1 OCN:
[0] (seq_comm_printcomms) 18 0 1 1 CPLOCN:
[0] (seq_comm_printcomms) 19 0 1 1 ALLROFID:
[0] (seq_comm_printcomms) 20 0 1 1 CPLALLROFID:
[0] (seq_comm_printcomms) 21 0 1 1 ROF:
[0] (seq_comm_printcomms) 22 0 1 1 CPLROF:
[0] (seq_comm_printcomms) 23 0 1 1 ALLGLCID:
[0] (seq_comm_printcomms) 24 0 1 1 CPLALLGLCID:
[0] (seq_comm_printcomms) 25 0 1 1 GLC:
[0] (seq_comm_printcomms) 26 0 1 1 CPLGLC:
[0] (seq_comm_printcomms) 27 0 1 1 ALLWAVID:
[0] (seq_comm_printcomms) 28 0 1 1 CPLALLWAVID:
[0] (seq_comm_printcomms) 29 0 1 1 WAV:
[0] (seq_comm_printcomms) 30 0 1 1 CPLWAV:
[0] (seq_comm_printcomms) 31 0 1 1 ALLESPID:
[0] (seq_comm_printcomms) 32 0 1 1 CPLALLESPID:
[0] (seq_comm_printcomms) 33 0 1 1 ESP:
[0] (seq_comm_printcomms) 34 0 1 1 CPLESP:
[0] (seq_comm_printcomms) 35 0 1 1 ALLIACID:
[0] (seq_comm_printcomms) 36 0 1 1 CPLALLIACID:
[0] (seq_comm_printcomms) 37 0 1 1 IAC:
[0] (seq_comm_printcomms) 38 0 1 1 CPLIAC:
[0] (t_initf) Read in prof_inparm namelist from: drv_in
[0] (t_initf) Using profile_disable= F
[0] (t_initf) profile_timer= 4
[0] (t_initf) profile_depth_limit= 12
[0] (t_initf) profile_detail_limit= 2
[0] (t_initf) profile_barrier= F
[0] (t_initf) profile_outpe_num= 1
[0] (t_initf) profile_outpe_stride= 0
[0] (t_initf) profile_single_file= F
[0] (t_initf) profile_global_stats= T
[0] (t_initf) profile_ovhd_measurement= F
[0] (t_initf) profile_add_detail= F
[0] (t_initf) profile_papi_enable= F
[0] 1 pes participating in computation
[0] -----------------------------------
[0] TASK# NAME
[0] 0 nelson.math.uwm.edu
[0]
[0] l, cnst_name(l), cnst_name_cw(l)
[0] 1 Q
[0] 2 CLDLIQ
[0] 3 CLDICE
[0] 4 NUMLIQ
[0] 5 NUMICE
[0] 6 RAINQM
[0] 7 SNOWQM
[0] 8 NUMRAI
[0] 9 NUMSNO
[0] 10 bc_a1 bc_c1
[0] 11 bc_a4 bc_c4
[0] 12 DMS
[0] 13 dst_a1 dst_c1
[0] 14 dst_a2 dst_c2
[0] 15 dst_a3 dst_c3
[0] 16 H2O2
[0] 17 H2SO4
[0] 18 ncl_a1 ncl_c1
[0] 19 ncl_a2 ncl_c2
[0] 20 ncl_a3 ncl_c3
[0] 21 num_a1 num_c1
[0] 22 num_a2 num_c2
[0] 23 num_a3 num_c3
[0] 24 num_a4 num_c4
[0] 25 pom_a1 pom_c1
[0] 26 pom_a4 pom_c4
[0] 27 SO2
[0] 28 so4_a1 so4_c1
[0] 29 so4_a2 so4_c2
[0] 30 so4_a3 so4_c3
[0] 31 SOAG
[0] 32 soa_a1 soa_c1
[0] 33 soa_a2 soa_c2
[0] calcsize addfld - num_a1_sfcsiz1
[0] calcsize addfld - num_a1_sfcsiz2
[0] calcsize addfld - num_c1_sfcsiz1
[0] calcsize addfld - num_c1_sfcsiz2
[0] calcsize addfld - num_a2_sfcsiz1
[0] calcsize addfld - num_a2_sfcsiz2
[0] calcsize addfld - num_c2_sfcsiz1
[0] calcsize addfld - num_c2_sfcsiz2
[0] calcsize addfld - num_a3_sfcsiz1
[0] calcsize addfld - num_a3_sfcsiz2
[0] calcsize addfld - num_c3_sfcsiz1
[0] calcsize addfld - num_c3_sfcsiz2
[0] calcsize addfld - num_a4_sfcsiz1
[0] calcsize addfld - num_a4_sfcsiz2
[0] calcsize addfld - num_c4_sfcsiz1
[0] calcsize addfld - num_c4_sfcsiz2
[0] calcsize addfld - num_a2_sfcsiz3
[0] calcsize addfld - num_a1_sfcsiz3
[0] calcsize addfld - num_a2_sfcsiz4
[0] calcsize addfld - num_a1_sfcsiz4
[0] calcsize addfld - num_c2_sfcsiz3
[0] calcsize addfld - num_c1_sfcsiz3
[0] calcsize addfld - num_c2_sfcsiz4
[0] calcsize addfld - num_c1_sfcsiz4
[0] calcsize addfld - so4_a2_sfcsiz3
[0] calcsize addfld - so4_a1_sfcsiz3
[0] calcsize addfld - so4_a2_sfcsiz4
[0] calcsize addfld - so4_a1_sfcsiz4
[0] calcsize addfld - so4_c2_sfcsiz3
[0] calcsize addfld - so4_c1_sfcsiz3
[0] calcsize addfld - so4_c2_sfcsiz4
[0] calcsize addfld - so4_c1_sfcsiz4
[0] calcsize addfld - soa_a2_sfcsiz3
[0] calcsize addfld - soa_a1_sfcsiz3
[0] calcsize addfld - soa_a2_sfcsiz4
[0] calcsize addfld - soa_a1_sfcsiz4
[0] calcsize addfld - soa_c2_sfcsiz3
[0] calcsize addfld - soa_c1_sfcsiz3
[0] calcsize addfld - soa_c2_sfcsiz4
[0] calcsize addfld - soa_c1_sfcsiz4
[0] calcsize addfld - ncl_a2_sfcsiz3
[0] calcsize addfld - ncl_a1_sfcsiz3
[0] calcsize addfld - ncl_a2_sfcsiz4
[0] calcsize addfld - ncl_a1_sfcsiz4
[0] calcsize addfld - ncl_c2_sfcsiz3
[0] calcsize addfld - ncl_c1_sfcsiz3
[0] calcsize addfld - ncl_c2_sfcsiz4
[0] calcsize addfld - ncl_c1_sfcsiz4
[0] calcsize addfld - dst_a2_sfcsiz3
[0] calcsize addfld - dst_a1_sfcsiz3
[0] calcsize addfld - dst_a2_sfcsiz4
[0] calcsize addfld - dst_a1_sfcsiz4
[0] calcsize addfld - dst_c2_sfcsiz3
[0] calcsize addfld - dst_c1_sfcsiz3
[0] calcsize addfld - dst_c2_sfcsiz4
[0] calcsize addfld - dst_c1_sfcsiz4
[0]
[0] subr. modal_aero_gasaerexch_init - primary carbon aging pointers
[0] pair 1 mode 4 ---> mode 1
[0] spec 24=num_a4 ---> spec 21=num_a1
[0] spec 26=pom_a4 ---> spec 25=pom_a1
[0] spec 11=bc_a4 ---> spec 10=bc_a1
[0]
[0] qconff addfld qconff_gaex kg/kg/s
[0] qevapff addfld qevapff_gaex kg/kg/s
[0] qconbb addfld qconbb_gaex kg/kg/s
[0] qevapbb addfld qevapbb_gaex kg/kg/s
[0] qconbg addfld qconbg_gaex kg/kg/s
[0] qevapbg addfld qevapbg_gaex kg/kg/s
[0] qcon addfld qcon_gaex kg/kg/s
[0] qevap addfld qevap_gaex kg/kg/s
[0] gasaerexch addfld bc_a1_sfgaex1 kg/m2/s
[0] gasaerexch addfld bc_a4_sfgaex1 kg/m2/s
[0] gasaerexch addfld H2SO4_sfgaex1 kg/m2/s
[0] gasaerexch addfld num_a1_sfgaex1 kg/m2/s
[0] gasaerexch addfld num_a4_sfgaex1 kg/m2/s
[0] gasaerexch addfld pom_a1_sfgaex1 kg/m2/s
[0] gasaerexch addfld pom_a4_sfgaex1 kg/m2/s
[0] gasaerexch addfld so4_a1_sfgaex1 kg/m2/s
[0] gasaerexch addfld so4_a2_sfgaex1 kg/m2/s
[0] gasaerexch addfld so4_a3_sfgaex1 kg/m2/s
[0] gasaerexch addfld SOAG_sfgaex1 kg/m2/s
[0] gasaerexch addfld soa_a1_sfgaex1 kg/m2/s
[0] gasaerexch addfld soa_a2_sfgaex1 kg/m2/s
[0] gasaerexch addfld dst_a1_sfgaex2 kg/m2/s
[0] gasaerexch addfld dst_c1_sfgaex2 kg/m2/s
[0] gasaerexch addfld dst_a2_sfgaex2 kg/m2/s
[0] gasaerexch addfld dst_c2_sfgaex2 kg/m2/s
[0] gasaerexch addfld dst_a3_sfgaex2 kg/m2/s
[0] gasaerexch addfld dst_c3_sfgaex2 kg/m2/s
[0] gasaerexch addfld ncl_a1_sfgaex2 kg/m2/s
[0] gasaerexch addfld ncl_c1_sfgaex2 kg/m2/s
[0] gasaerexch addfld ncl_a2_sfgaex2 kg/m2/s
[0] gasaerexch addfld ncl_c2_sfgaex2 kg/m2/s
[0] gasaerexch addfld ncl_a3_sfgaex2 kg/m2/s
[0] gasaerexch addfld ncl_c3_sfgaex2 kg/m2/s
[0] gasaerexch addfld num_a1_sfgaex2 #/m2/s
[0] gasaerexch addfld num_c1_sfgaex2 #/m2/s
[0] gasaerexch addfld num_a2_sfgaex2 #/m2/s
[0] gasaerexch addfld num_c2_sfgaex2 #/m2/s
[0] gasaerexch addfld num_a3_sfgaex2 #/m2/s
[0] gasaerexch addfld num_c3_sfgaex2 #/m2/s
[0] gasaerexch addfld so4_a1_sfgaex2 kg/m2/s
[0] gasaerexch addfld so4_c1_sfgaex2 kg/m2/s
[0] gasaerexch addfld so4_a2_sfgaex2 kg/m2/s
[0] gasaerexch addfld so4_c2_sfgaex2 kg/m2/s
[0] gasaerexch addfld so4_a3_sfgaex2 kg/m2/s
[0] gasaerexch addfld so4_c3_sfgaex2 kg/m2/s
[0] gasaerexch addfld soa_a1_sfgaex2 kg/m2/s
[0] gasaerexch addfld soa_c1_sfgaex2 kg/m2/s
[0] gasaerexch addfld soa_a2_sfgaex2 kg/m2/s
[0] gasaerexch addfld soa_c2_sfgaex2 kg/m2/s
[0]
[0] subr. modal_aero_coag_init
[0] pair 1 mode 2 ---> mode 1 eff 1
[0] spec 29=so4_a2 ---> spec 28=so4_a1
[0] spec 33=soa_a2 ---> spec 32=soa_a1
[0] spec 19=ncl_a2 ---> spec 18=ncl_a1
[0] spec 14=dst_a2 ---> spec 13=dst_a1
[0] pair 2 mode 4 ---> mode 1 eff 1
[0] spec 26=pom_a4 ---> spec 25=pom_a1
[0] spec 11=bc_a4 ---> spec 10=bc_a1
[0] pair 3 mode 2 ---> mode 4 eff 1
[0] spec 29=so4_a2 ---> spec 28=so4_a1
[0] spec 33=soa_a2 ---> spec 32=soa_a1
[0] spec 19=ncl_a2 ---> spec 18=ncl_a1
[0] spec 14=dst_a2 ---> spec 13=dst_a1
[0]
[0] modal_aero_coag_init addfld bc_a1_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld bc_a4_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld dst_a1_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld dst_a2_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld ncl_a1_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld ncl_a2_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld num_a1_sfcoag1 #/m2/s
[0] modal_aero_coag_init addfld num_a2_sfcoag1 #/m2/s
[0] modal_aero_coag_init addfld num_a4_sfcoag1 #/m2/s
[0] modal_aero_coag_init addfld pom_a1_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld pom_a4_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld so4_a1_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld so4_a2_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld soa_a1_sfcoag1 kg/m2/s
[0] modal_aero_coag_init addfld soa_a2_sfcoag1 kg/m2/s
[0] modal_aero_newnuc_init addfld H2SO4_sfnnuc1 kg/m2/s
[0] modal_aero_newnuc_init addfld num_a2_sfnnuc1 #/m2/s
[0] modal_aero_newnuc_init addfld so4_a2_sfnnuc1 kg/m2/s
[0]
[0]
[0] 1 pes participating in computation for CLM
[0]
[0] -----------------------------------
[0]
[0] NODE# NAME
[0] ( 0) nelson.math.uwm.edu
[0] Reading setup_nml
[0] Reading grid_nml
[0] Reading tracer_nml
[0] Reading thermo_nml
[0] Reading dynamics_nml
[0] Reading shortwave_nml
[0] Reading ponds_nml
[0] Reading forcing_nml
[0] Reading zbgc_nml
[0] Grid specification
[0] ------------------
[0] ewn : 416
[0] nsn : 704
[0] upn : 11
[0] EW grid spacing : 4000.0000000000000
[0] NS grid spacing : 4000.0000000000000
[0] Outflow global boundary conditions; scalars in global halo will be set to zero
[0] sigma file :
[0]
[0] Time steps
[0] ----------
[0] start time (yr) : 0.0000000000000000
[0] end time (yr) : 1000.0000000000000
[0] time step (yr) : 0.10000000000000001
[0] nsteps per year : 10
[0] thermal dt factor : 1.0000000000000000
[0] diagnostic interval (years): 0.10000000000000001
[0]
[0] Dycore options
[0] -------------
[0] I/O parameter file :
[0] Dycore : 2 glissade
[0] temperature calculation : 1 prognostic temperature
[0] flow law : 2 Paterson and Budd
[0] basal_water : 0 none
[0] marine_margin : 1 remove all floating ice
[0] calving_init : 1 ice calves at initialization
[0] calving_domain : 1 calving in all cells where criterion is met
[0] Icebergs will be removed
[0] The thickness of marine ice cliffs will be limited
[0] calving_domain : 1 calving in all cells where criterion is met
[0] Calving-front cells will not be culled at initialization
[0] evolution : 3 incremental remapping
[0] minthck for diagnostics : 1 include cells with H > thklim in global diagnostics
[0] vertical_integration : 0 standard
[0] basal melt, floating ice: 0 none
[0] basal mass balance : 1 in continuity eqn
[0] smb input units : 0 SMB input in units of m/yr ice
[0] smb input function : 0 SMB input as function of (x,y)
[0] artm input function : 0 artm input as function of (x,y)
[0] overwrite_acab : 0 do not overwrite acab anywhere
[0] geothermal heat flux : 1 read flux from file, if present
[0] isostasy : 0 no isostasy calculation
[0]
[0] Higher-order options:
[0] ----------
[0] ho_whichefvs : 2 nonlinear, from eff strain rate
[0] ho_whichdisp : 1 first-order model (Blatter-Pattyn)
[0] ho_whichthermal_timestep: 2 vertical thermal solve split into two parts
[0] ho_whichbabc : 3 pseudo-plastic sliding law
[0] ho_whichbeta_limit : 0 absolute beta limit based on beta_grounded_min
[0] ho_whichbwat : 2 basal water depth computed from local till model
[0] ho_whicheffecpress : 4 reduced effecpress with increasing basal water
[0] which_ho_nonlinear : 1 use Picard iteration with acceleration
[0] ho_whichresid : 4 relative L2 norm, |Ax-b|/|b|
[0] ho_whichsparse : 3 Native PCG solver, Chronopoulos-Gear
[0] ho_whichapprox : 4 Depth-integrated viscosity (glissade_velo_higher)
[0] ho_whichgradient : 0 centered gradient (glissade)
[0] ho_whichgradient_margin : 1 compute edge gradient when ice lies above ice-free land
[0] ho_whichvertical_remap : 0 first-order accurate
[0] ho_whichassemble_beta : 1 use local beta at each vertex (glissade dycore)
[0] ho_whichassemble_taud : 1 use local driving stress at each vertex (glissade dycore)
[0] ho_whichassemble_bfric : 1 use local basal friction at each vertex (glissade dycore)
[0] ho_whichassemble_lateral : 1 use local thck and usrf on each cell face (glissade dycore)
[0] ho_whichcalving_front : 0 no subgrid calving front parameterization
[0] ho_whichground : 2 deluxe GLP, 0 <= f_ground <= 1 for both vertices and cells
[0] ho_whichground_bmlt : 1 weigh bmlt_float by floating fraction of cell
[0] ho_whichflotation_function: 3 modified linear = -b - (rhoi/rhoo)*H
[0] ho_whichice_age : 1 ice age computation on
[0] glissade_maxiter : 50
[0] linear_solve_ncheck : 5
[0] linear_maxiters : 200
[0] linear_tolerance : 1.0000000000000000E-008
[0] ho_whichprecond : 1 Diagonal preconditioner (native PCG)
[0]
[0] Parameters
[0] ----------
[0] thickness limit for dynamically active ice (m) : 1.0000000000000000
[0] Advection will be subcycled when CFL > 0.50000000000000000
[0] thickness limit for temperature calculations (m) : 1.0000000000000000
[0] thickness scale for gradient ramp (m): 50.000000000000000
[0] pmp threshold for temperature (K): 1.0000000000000000E-003
[0] taumax_cliff : 1000000.0000000000
[0] cliff time scale (yr) : 0.0000000000000000
[0] ice density (kg/m^3) : 917.00000000000000
[0] ocean density (kg/m^3) : 1026.0000000000000
[0] gravitational accel (m/s^2) : 9.8061600000000002
[0] heat capacity of ice (J/kg/K) : 2117.2700000000000
[0] latent heat of ice (J/kg) : 333700.00000000000
[0] triple point of water (K) : 273.16000000000003
[0] geothermal flux (W/m^2) : -5.0000000000000003E-002
[0] flow factor (grounded ice) : 1.0000000000000000
[0] flow factor (floating ice) : 1.0000000000000000
[0] max surface slope : 0.10000000000000001
[0] min effective strain rate (yr^-1) : 1.0000000000000000E-008
[0] pseudo-plastic q : 0.50000000000000000
[0] pseudo-plastic u0 : 100.00000000000000
[0] pseudo-plastic phi_min (deg) : 5.0000000000000000
[0] pseudo-plastic phi_max (deg) : 40.000000000000000
[0] pseudo-plastic bed min (m) : -700.00000000000000
[0] pseudo-plastic bed max (m) : 700.00000000000000
[0] min beta, grounded ice (Pa yr/m) : 100.00000000000000
[0] effective pressure delta : 2.0000000000000000E-002
[0] maximum till water depth (m) : 2.0000000000000000
[0] till drainage rate (m/yr) : 1.0000000000000000E-003
[0]
[0] number of ocean levels : 1
[0] Reading zocn levels from config file
[0] No ocean basins
[0]
[0] GLAD climate
[0] -------------
[0] evolve_ice (0=fixed, 1=evolve): 0
[0] The ice sheet state will not evolve after initialization
[0] Mass-balance accumulation time will be set to max(ice timestep, mbal timestep)
[0] ice_tstep_multiply: 1
[0] In glissade_initialise
[0] CISM 2.0
[0] Setting outflow boundary conditions
[0] Layout(EW,NS) = 416 704 total procs = 1
[0] Computing Glide sigma levels
[0] Sigma levels:
[0] ------------------
[0] 0.000 0.231 0.407 0.544 0.653 0.741 0.812 0.872 0.922 0.964 1.000
[0]
[0] opening file /home/pub/cam_inputdata/glc/cism/Greenland/greenland_4km_epsg3413_c171126.nc for input
[0] * WARNING: Input file contained no level dimension. This is not necessarily a problem.
[0] Reading time slice 1 ( 0.0000000000000000 ) from file /home/pub/cam_inputdata/glc/cism/Greenland/greenland_4km_epsg3413_c171126.nc at time 0.0000000000000000
[0] Loading x1
[0] Loading y1
[0] Loading acab
[0] * scaling acab
[0] Loading artm
[0] Loading bheatflx
[0] Loading lat
[0] Loading lon
[0] Loading thk
[0] * scaling thk
[0] Loading topg
[0] * scaling topg
[0] Global idiag, jdiag: 134 280
[0] Local idiag, jdiag, task: 136 282 0
[0] * Global idiag, jdiag: 134 280
[0] * Local idiag, jdiag, task: 136 282 0
[0] Set area scale factor = 1 for polar stereographic projection
[0] Projection
[0] ----------
[0] Type: Stereographic
[0] Longitude of central meridian: -45.000000000000000
[0] Latitude of projection origin: 90.000000000000000
[0] False easting: 0.0000000000000000
[0] False northing: 0.0000000000000000
[0] Standard parallel: 70.000000000000000
[0] Scale factor: 0.0000000000000000
[0] compute_area_factor: F
[0] Initializing ice temperature based on advective-diffusive balance in each column
[0] Offset from pressure melting point temperature = 5.0000000000000000
[0] Done in glissade_initialise
[0]
[0] Compute ice velocities, time = 0.0000000000000000
[0] Solving depth-integrated viscosity approximation
[0] Running with Picard acceleration
[0]
[0] iter # resid, |Ax-b|/|b| target resid
[0] Solved the linear system, niters, err = 190 9.3593305990326561E-009
[0] 1 1.00000 0.100000E-06
[0] Solved the linear system, niters, err = 175 7.1201681315256159E-009
[0] 2 0.842258 0.100000E-06
[0] Solved the linear system, niters, err = 175 3.4136460754124431E-009
[0] 3 0.807756 0.100000E-06
[0] Solved the linear system, niters, err = 150 8.2544239074831971E-009
[0] 4 0.642726 0.100000E-06
[0] Solved the linear system, niters, err = 120 5.4822162910630730E-009
[0] 5 0.460887 0.100000E-06
[0] Solved the linear system, niters, err = 110 7.0506610251935723E-009
[0] 6 0.301137 0.100000E-06
[0] Solved the linear system, niters, err = 100 8.6699626875157887E-009
[0] 7 0.182866 0.100000E-06
[0] Solved the linear system, niters, err = 90 6.4095329444652477E-009
[0] 8 0.313033E-01 0.100000E-06
[0] Solved the linear system, niters, err = 75 9.7353583141122729E-009
[0] 9 0.143345E-02 0.100000E-06
[0] Solved the linear system, niters, err = 75 6.4919874556306214E-009
[0] 10 0.707905E-03 0.100000E-06
[0] Solved the linear system, niters, err = 60 8.6553074813620268E-009
[0] 11 0.353373E-03 0.100000E-06
[0] Solved the linear system, niters, err = 60 7.2593616521848679E-009
[0] 12 0.175953E-03 0.100000E-06
[0] Solved the linear system, niters, err = 45 9.9044836880506143E-009
[0] 13 0.832134E-04 0.100000E-06
[0] Solved the linear system, niters, err = 40 8.4469265508350323E-009
[0] 14 0.396185E-04 0.100000E-06
[0] Solved the linear system, niters, err = 40 3.1463311803925867E-009
[0] 15 0.198952E-04 0.100000E-06
[0] Solved the linear system, niters, err = 35 3.9895337576732788E-009
[0] 16 0.930128E-05 0.100000E-06
[0] Solved the linear system, niters, err = 30 5.2434802198272482E-009
[0] 17 0.444376E-05 0.100000E-06
[0] Solved the linear system, niters, err = 25 4.2028923762165416E-009
[0] 18 0.224662E-05 0.100000E-06
[0] Solved the linear system, niters, err = 20 6.0815736154267869E-009
[0] 19 0.103521E-05 0.100000E-06
[0] Solved the linear system, niters, err = 15 6.3973370652062350E-009
[0] 20 0.501897E-06 0.100000E-06
[0] Solved the linear system, niters, err = 15 3.9553980030621598E-009
[0] 21 0.253486E-06 0.100000E-06
[0] Solved the linear system, niters, err = 10 4.6427848443223653E-009
[0] 22 0.116960E-06 0.100000E-06
[0] Solved the linear system, niters, err = 5 8.4982643035322871E-009
[0] 23 0.570148E-07 0.100000E-06
[0] Glissade solution has converged, outer counter, err = 23 2.7090732657684028E-002
[0] Loading lat
[0] Loading lon
[0] ----------------------------------------------------------
[0]
[0] * Diagnostic output, time = 0.0000000000000000
[0]
[0] * Total ice area (km^2) 0.1667679999998247E+07
[0] * Grounded ice area (km^2) 0.1663999999998256E+07
[0] * Floating ice area (km^2) 0.3679999999999986E+04
[0] * Total ice volume (km^3) 0.2952805440572556E+07
[0] * Total ice mass (kg) 0.2707722589005033E+19
[0] * Mass above flotation (kg) 0.2668477290954696E+19
[0] * Total ice energy (J) -0.1142852668752744E+24
[0] * Total SMB flux (Gt/y) 0.0000000000000000E+00
[0] * Total BMB flux (Gt/y) -0.0000000000000000E+00
[0] * Total calving flux (Gt/y) -0.0000000000000000E+00
[0] * Total dmass/dt (Gt/y) 0.0000000000000000E+00
[0] * dmass/dt error (Gt/y) 0.0000000000000000E+00
[0] * Total gr line flux (Gt/y) -0.1245122946713688E+02
[0] * Mean thickness (m) 1770.6067354502413309
[0] * Mean temperature (C) -19.9347059892333647
[0] * Max thickness (m), i, j 3402.6667480468750000 230 366
[0] * Max temperature, i, j, k -2.5815498828887939 297 216 0
[0] * Min temperature, i, j, k -30.3878574371337891 236 451 0
[0] * Max sfc spd (m/yr), i, j 1014.7894835489262277 97 406
[0] * Max base spd (m/yr), i, j 982.8610149305145569 97 406
[0]
[0] * Grid point diagnostics: (i,j) = 134 280
[0] * Local (i,j,rank) = 136 282 0
[0]
[0] * Upper surface (m) 343.5833129882813068
[0] * Thickness (m) 732.3333129882812500
[0] * Bedrock topo (m) -388.7500000000000000
[0] * Sfc mass balance (m/yr) 0.0000000000000000
[0] * Basal mass balance (m/yr) -0.0000000000000000
[0] * Basal water depth (m) 0.0000000000000000
[0] * Basal heat flux (W/m^2) -0.0548120401799679
[0]
[0] * Sigma Ice speed (m/yr) Ice temperature (C)
[0] * 0.000 471.1818590108118769 -9.7645025253295898
[0] * 0.116 -9.2874932227323068
[0] * 0.231 461.9941624941125724
[0] * 0.319 -8.4476792256992574
[0] * 0.407 439.4390908204939592
[0] * 0.476 -7.8025271680867023
[0] * 0.544 407.2954861182628861
[0] * 0.599 -7.2961458155157555
[0] * 0.653 366.3998246893917212
[0] * 0.697 -6.8913726356655065
[0] * 0.741 317.1923217172954423
[0] * 0.777 -6.5627116616410941
[0] * 0.812 260.8834262808961171
[0] * 0.842 -6.2921959230560542
[0] * 0.872 199.3256794206245104
[0] * 0.897 -6.0668670412763541
[0] * 0.922 134.5214104260864190
[0] * 0.943 -5.8771875500593502
[0] * 0.964 68.2772661542977346
[0] * 0.982 -5.7160111263863413
[0] * 1.000 2.0601702095503667 -5.6417792671673537
[0]
[0] Opening file ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo.cism.initial_hist.0001-01-01-00000.nc for output;
[0] Write output at start of run and every 1.0000000000000000 years
[0] Creating variables internal_time, time, and tstep_count
[0] Creating variable level
[0] Creating variable lithoz
[0] Creating variable nlev_smb
[0] Creating variable staglevel
[0] Creating variable stagwbndlevel
[0] Creating variable x0
[0] Creating variable x1
[0] Creating variable y0
[0] Creating variable y1
[0] Creating variable zocn
[0] Creating variable artm
[0] Creating variable smb
[0] Creating variable thk
[0] Creating variable topg
[0] Creating variable usurf
[0] Writing to file ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo.cism.initial_hist.0001-01-01-00000.nc at time 0.0000000000000000
[0] WHL: oc_tavg_helper is not associated; associate now
[0] Opening file ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo.cism.tavg_helper.0000-00-00-00000.nc for output;
[0] Write output every 9999999.0000000000 years
[0] Creating variables internal_time, time, and tstep_count
[0] Creating variable level
[0] Creating variable lithoz
[0] Creating variable nlev_smb
[0] Creating variable staglevel
[0] Creating variable stagwbndlevel
[0] Creating variable x0
[0] Creating variable x1
[0] Creating variable y0
[0] Creating variable y1
[0] Creating variable zocn
[0] Creating variable artm
[0] Creating variable smb
[0] Creating variable thk
[0] Creating variable topg
[0] Creating variable usurf
[0] MCT::m_Router::initp_: GSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: RGSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: RGSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: GSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: GSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: RGSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: RGSMap indices not increasing...Will correct
[0] MCT::m_Router::initp_: GSMap indices not increasing...Will correct
[0] calcsize j,iq,jac, lsfrm,lstoo 1 1 1 22 21
[0] calcsize j,iq,jac, lsfrm,lstoo 1 1 2 22 21
[0] calcsize j,iq,jac, lsfrm,lstoo 1 2 1 29 28
[0] calcsize j,iq,jac, lsfrm,lstoo 1 2 2 29 28
[0] calcsize j,iq,jac, lsfrm,lstoo 1 3 1 33 32
[0] calcsize j,iq,jac, lsfrm,lstoo 1 3 2 33 32
[0] calcsize j,iq,jac, lsfrm,lstoo 1 4 1 19 18
[0] calcsize j,iq,jac, lsfrm,lstoo 1 4 2 19 18
[0] calcsize j,iq,jac, lsfrm,lstoo 1 5 1 14 13
[0] calcsize j,iq,jac, lsfrm,lstoo 1 5 2 14 13
[0] calcsize j,iq,jac, lsfrm,lstoo 2 1 1 21 22
[0] calcsize j,iq,jac, lsfrm,lstoo 2 1 2 21 22
[0] calcsize j,iq,jac, lsfrm,lstoo 2 2 1 28 29
[0] calcsize j,iq,jac, lsfrm,lstoo 2 2 2 28 29
[0] calcsize j,iq,jac, lsfrm,lstoo 2 3 1 32 33
[0] calcsize j,iq,jac, lsfrm,lstoo 2 3 2 32 33
[0] calcsize j,iq,jac, lsfrm,lstoo 2 4 1 18 19
[0] calcsize j,iq,jac, lsfrm,lstoo 2 4 2 18 19
[0] calcsize j,iq,jac, lsfrm,lstoo 2 5 1 13 14
[0] calcsize j,iq,jac, lsfrm,lstoo 2 5 2 13 14
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] Opening file ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo.cism.r.0001-01-01-09000.nc for output;
[0] Write output at start of run and every 1.0000000000000000 years
[0] Creating variables internal_time, time, and tstep_count
[0] Temperature remapping option uses temperature on a staggered vertical grid. The netCDF output variable "temp" has been changed to "tempstag".
[0] Temperature remapping option uses dissip on a staggered vertical grid. The netCDF output variable "dissip" has been changed to "dissipstag".
[0] Creating variable level
[0] Creating variable lithoz
[0] Creating variable nlev_smb
[0] Creating variable staglevel
[0] Creating variable stagwbndlevel
[0] Creating variable x0
[0] Creating variable x1
[0] Creating variable y0
[0] Creating variable y1
[0] Creating variable zocn
[0] Creating variable acab
[0] Creating variable artm
[0] Creating variable beta
[0] Creating variable bfricflx
[0] Creating variable bheatflx
[0] Creating variable btractx
[0] Creating variable btracty
[0] Creating variable bwat
[0] Creating variable dissipstag
[0] Creating variable efvs
[0] Creating variable ice_age
[0] Creating variable kinbcmask
[0] Creating variable tempstag
[0] Creating variable thk
[0] Creating variable thkmask
[0] Creating variable topg
[0] Creating variable uvel
[0] Creating variable uvel_2d
[0] Creating variable vvel
[0] Creating variable vvel_2d
[0] Creating variable hflx_tavg
[0] Creating variable lat
[0] Creating variable lon
[0] Creating variable rofi_tavg
[0] Creating variable rofl_tavg
[0] Writing to file ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo.cism.r.0001-01-01-09000.nc at time 0.0000000000000000
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] WHL, oc_tavg_helper is already associated; reset the tavg fields
[0] Closing input file /home/pub/cam_inputdata/glc/cism/Greenland/greenland_4km_epsg3413_c171126.nc
[0] Closing output file ERP_Ln9.f10_f10_mg37.F2000climo.nelson_gnu.cam-outfrq9s.20220207_163057_qwqibo.cism.tavg_helper.0000-00-00-00000.nc
[0] Some Stats
[0] Maximum temperature iterations: 0
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