Clubb silhs gg (#1239) — noreply / githubweb
Trying to avoid merge issues — Steffen Domke / githubweb
Added descriptor for lat/lon values in header, fixed minor issues — Steffen Domke / githubweb
Added automatic adjustment of lat/lon values to err_info setter — Steffen Domke / githubweb

#377 (Apr 23, 2025, 10:15:47 AM)

Clubb silhs gg (#1239) — noreply / githubweb
Trying to avoid merge issues — Steffen Domke / githubweb
Add a blank line to README in order to note BIT_CHANGING:969bc4aa2a1db2664c0f92b98d2df5544c554c32 — noreply / githubweb
Added descriptor for lat/lon values in header, fixed minor issues — Steffen Domke / githubweb
Added automatic adjustment of lat/lon values to err_info setter — Steffen Domke / githubweb
I updated adj_low_res_nu for use with a generalized grid. It is — bmg2 / githubweb
Since the call to adj_low_res_nu is not tested by CLUBB's main — bmg2 / githubweb

#375 (Apr 10, 2025, 3:46:21 PM)

Fixed err_header formatting — Steffen Domke / githubweb

#373 (Apr 10, 2025, 3:32:24 PM)

Fixing newline character in error headers — Steffen Domke / githubweb

#372 (Apr 10, 2025, 3:23:13 PM)

Sneaky fix — Steffen Domke / githubweb
Sneaky fix pt2 — Steffen Domke / githubweb

#371 (Apr 10, 2025, 3:12:40 PM)

Fixed issues with ACC run — Steffen Domke / githubweb
Finishing touches: Renamed OMP to chunk index, modified error headers — Steffen Domke / githubweb

#370 (Apr 10, 2025, 11:44:06 AM)

Deleted parallelization from err_info procedures to fix ACC issues — Steffen Domke / githubweb

#369 (Apr 9, 2025, 12:18:30 AM)

Making it so the ascending vs. descending grid tests pass for the — bmg2 / githubweb

#368 (Apr 8, 2025, 2:50:23 PM)

Refactored initialization process for err_info so init and cleanup can be at the same level — Steffen Domke / githubweb

#366 (Apr 3, 2025, 3:59:05 PM)

err_info is now fed through SILHS, other changes — Steffen Domke / githubweb
Fixed error — Steffen Domke / githubweb
More fixes — Steffen Domke / githubweb

#364 (Mar 22, 2025, 11:19:40 AM)

Updated the code to use break or return when clubb fatal error is — bmg2 / githubweb

#363 (Mar 21, 2025, 11:16:15 AM)

I fixed a bug in the generalized grid test code that was resulting — bmg2 / githubweb
Improved some error handling in clubb_driver.F90 — bmg2 / githubweb
Fixed an issue where ascending and descending grids were producing — bmg2 / githubweb
Commiting changes to keep calculation order the same for additions — bmg2 / githubweb
I removed bugs that were causing failures of the bit-for-bit — bmg2 / githubweb
I have fixed the ascending vs. descending grid error for the situation — bmg2 / githubweb
I am removing the flag setting of l_mono_flux_lim_thlm to .false. — bmg2 / githubweb

#362 (Mar 17, 2025, 9:57:44 PM)

Moving the flag required editing the delimiters. — bmg2 / githubweb

#361 (Mar 17, 2025, 9:41:43 PM)

The variable gr now needs to be passed into subroutine pvertinterp — bmg2 / githubweb

#360 (Mar 17, 2025, 8:00:34 PM)

Fixed a bug. This was caught by running the new hybrid PDF after — bmg2 / githubweb
The CLUBB code requires l_min_xp2_from_corr_wx and — bmg2 / githubweb
Finally fixing the bug where Cx_fnc_Richardson needs to be interpolated — bmg2 / githubweb
I fixed an issue with the generalized grid when the expldiff of rtm — bmg2 / githubweb

#358 (Mar 10, 2025, 3:50:30 PM)

test rico — Gunther Huebler / githubweb

#356 (Mar 6, 2025, 3:38:04 PM)

Test error — Gunther Huebler / githubweb

#355 (Mar 6, 2025, 3:35:08 PM)

Test error — Gunther Huebler / githubweb

#352 (Mar 6, 2025, 2:51:36 PM)

uh — Gunther Huebler / githubweb

#347 (Feb 21, 2025, 11:42:17 AM)

test remove gpu annotations in fire — 0-freundlich-adenin / githubweb

#345 (Feb 21, 2025, 11:08:58 AM)

add flags to all config model flag files — 0-freundlich-adenin / githubweb

#343 (Feb 21, 2025, 10:54:48 AM)

Slightly relaxing the convergence criteria to fix convergence test. — Gunther Huebler / githubweb
QuadTune: On matrix-eqn bar chart, plot only extraMetricsToPlot. Add sens-bias scatterplot of only extraMetricsToPlot. In parameter increments bar chart, change absolute values to squares. — Vince Larson / githubweb
change remapping subroutine to take number of levels and levels as input instead of whole grid object — 0-freundlich-adenin / githubweb
add more general functions to interpolate — 0-freundlich-adenin / githubweb
QuadTune: Add useLongTitle option, which adds extra information on the plotted quantity, if desired. — Vince Larson / githubweb
QuadTune: Plot bias instead of negative bias on metricsBarChart and bias-vs-sensitivity plots. — Vince Larson / githubweb
add and refactor functions for remapping values given on zm levels — steffenc34 / githubweb
Monoflux GPU optimization (#1221) — noreply / githubweb
fix compiler errors and refactoring to stay under 100 chars per line — 0-freundlich-adenin / githubweb
remove TODOs and used new interpolating function in interpolate_forcings — 0-freundlich-adenin / githubweb
add functions for adaptive grid generation and grid density function normalization — 0-freundlich-adenin / githubweb
QuadTune: Made plot_PcSensMap work when len(varPrefixes) > 1. — Vince Larson / githubweb
QuadTune: Merge in bootstrap sampling — noreply / githubweb
Swapping the loop order on a few kernels, I found this faster for the nvhpc compiler and it's BFB — Gunther Huebler / githubweb
add conservative ullrich remapping to cases with forcing time dependent inputs — 0-freundlich-adenin / githubweb
BIT_CHANGING bug fix that only affects l_t_dependent cases running with multiple columns, I detected this with cgils cases, but I'm not sure how it slipped through initially. — Gunther Huebler / githubweb
add grid adaptation and flag — 0-freundlich-adenin / githubweb
clean up and add warning for case when remapping from dycore flag cannot be used — 0-freundlich-adenin / githubweb
Set l_wp2_fill_holes_tke to true by default (#1226) — noreply / githubweb
some refactoring — 0-freundlich-adenin / githubweb
add logical flag for dycore and renamed flags for dycore and grid adaptation — 0-freundlich-adenin / githubweb
Remove err code (#1218) — noreply / githubweb
remove ifdefs — 0-freundlich-adenin / githubweb
Renamed check_res to err_code in numerical_check.F90 for consistency (#1227) — noreply / githubweb
refactoring — 0-freundlich-adenin / githubweb
add units — 0-freundlich-adenin / githubweb
changed Lscale to inverse — noreply / githubweb
add write to file for grid adaptation (still WIP) — 0-freundlich-adenin / githubweb

#342 (Feb 21, 2025, 10:14:44 AM)

Removing the target attributes wherever possible. These are artifacts from when gr and the the stats types were globals, and got naively copied when these were pushed through the call stack. — Gunther Huebler / githubweb
Remove radf variable from CLUBB call — noreply / githubweb
Initializing total_mismatches to zero. — Gunther Huebler / githubweb
QuadTune: Print leverage values and make other minor refactorings. — Vince Larson / githubweb
New/new_hybrid PDF Stats Removal (#1185) — noreply / githubweb
Copyout Nuke (#1182) — noreply / githubweb
Ri zm calc cleanup (#1186) — noreply / githubweb
Monoflux test (#1188) — noreply / githubweb
Fixing bug. This loop has a vertical dependency prevent the use of collapse(2). See https://github.com/larson-group/cam/issues/175\#issuecomment-2261283301 — Gunther Huebler / githubweb
Small bug fix — Gunther Huebler / githubweb
refactoring to remove compiler warnings (#1187) — noreply / githubweb
Added requirements.txt for running the sens_matrix_dashboard. — hasenau2 / githubweb
QuadTune: Introduce new utility function to create scatterplots and plot first 2 SVD components. — Vince Larson / githubweb
I am copying the round-off level changes made to grid weights — bmg2 / githubweb
Mono Flux Optimizations (#1189) — noreply / githubweb
QuadTune: Create SVD plot, start to add checks on global means (unfinished), and start to add capability to include multiple fields (SWCF, LWCF, etc.) in metrics (unfinished). — Vince Larson / githubweb
add Lscale intent(out) to advance_clubb_core and advance_clubb_core_api (#1190) — noreply / githubweb
Bindiff script (#1191) — noreply / githubweb
Added min_max_smth_mag as a Fortran parameter to constants_clubb.F90 (#1192) — noreply / githubweb
QuadTune: Allow QuadTune to simultaneously tune for multiple 20x20 fields, e.g., SWCF, LWCF, and PRECT. — Vince Larson / githubweb
Added rcm-background to pyplotgen animations (#1195) — noreply / githubweb
Multicol CLUBB (#1193) — noreply / githubweb
QuadTune: Revise PCA biplot and clarify how variables are masked. — Vince Larson / githubweb
add run_bindiff_w_flags.py script. #1181 pull request #1194 — noreply / githubweb
Fix time height plots (#1196) — noreply / githubweb
QuadTune: De-bias matrix before calculating parameter correlations, add comments about definition of residual, include metric name in hover text. — Vince Larson / githubweb
QuadTune: De-bias matrix before calculating parameter correlations, add comments about definition of residual, include metric name in hover text. — Vince Larson / githubweb
QuadTune: Use SVD to approximate the sensitivity matrix, `normlzdSensMatrixPoly`, and curvature matrix, `normlzdCurvMatrix`. — Vince Larson / githubweb
remove Lscale, Lscale_up and Lscale_down from stat_fields_reader and restart_clubb call and remove recalculation of Lscale Ticket #1166 (#1197) — noreply / githubweb
Adding multi_col cases to run_bindiff.py and adding new multicol BFBness test. — Gunther Huebler / githubweb
Renaming some jenkins tests and making them use a new directory — Gunther Huebler / githubweb
Changing test name to indicate that it runs on GPUs. — Gunther Huebler / githubweb
Updates to jenkins scripts. — Gunther Huebler / githubweb
Updating script usage in plot tests. — Gunther Huebler / githubweb
I am making the loops for the wp3 ta term (using ADG1 PDF) symmetric. — bmg2 / githubweb
QuadTune: 1) Add beginnings of maps of SVD pattern, although this task is unfinished. 2) Normalize all regions by global mean, rather than normalizing each region separately. 3) Make sensitivities signed in sensitivity versus bias scatterplot. — Vince Larson / githubweb
Add sam bv calc (#1141) — noreply / githubweb
QuadTune: Display maps of the first 4 SVD patterns using dash, rather than make_subplots. — Vince Larson / githubweb
QuadTune: Create 2 new plots. — Vince Larson / githubweb
QuadTune: Break out loss function contributions by metric and plot the metrics with the greatest improvements and degradations. — Vince Larson / githubweb
QuadTune: Break out loss function contributions by metric and plot the metrics with the greatest improvements and degradations. — Vince Larson / githubweb
Small improvements to bindiff script. — Gunther Huebler / githubweb
BIT_CHANGING bug fix with soil veg (#1200) — noreply / githubweb
Prescribe forcings loop pushing (#1201) — noreply / githubweb
QuadTune: Plot orange x on threeDot panels in order to represent what change QuadTune actually wants to make to the metrics. — Vince Larson / githubweb
Prescribe Forcings GPUization (#1204) — noreply / githubweb
QuadTune: Fix commit bug and add numXBoxes. — Vince Larson / githubweb
Moving Lscale from an acc create statement inside clubb to the acc output statement in clubb_api. This is bug fix that is BIT_CHANGING, but only for silhs cases running on the GPU. Also using this to add BIT_CHANGING:aff1bb12551c5b3a8ab1c4d773ef5c17fb96c53b, as that commit was BC but just missing the message. — Gunther Huebler / githubweb
Various Small Tweaks (#1205) — noreply / githubweb
QuadTune: 1) Create new plot that shows tuning tradeoffs via U dot bias. 2) Improve bar chart showing the mean contribution of different parameters. — Vince Larson / githubweb
Making a correction to the doubled plus sign from commit a1fcfe8. — bmg2 / githubweb
As part of generalizing the code to work with both an ascending and — bmg2 / githubweb
Multi Column Mirror Test (#1206) — noreply / githubweb
Clubb Driver Semi GPUization Part4 (#1209) — noreply / githubweb
QuadTune: Plot a map of the change in the loss function for each region. — Vince Larson / githubweb
Fixed time-height plot colormaps (#1210) — noreply / githubweb
Multi col output update (#1211) — noreply / githubweb
QuadTune: Added colorbars to regional map plots. — Vince Larson / githubweb
QuadTune: 1) Change coloring of scatterpoints to represent either loss changes or residuals. 2) Add map of residuals to complement map of bias. — Vince Larson / githubweb
Likely non-bit-changing housekeeping (#1213) — noreply / githubweb
Fix pyplotgen timeheight cmaps (#1212) — noreply / githubweb
QuadTune: 1) Add bar chart that shows |metric_changes| due to each parameter. 2) Fix colorbars on maps. 3) Allow download of hi-res figures. 4) Make background of scatterplots grey. — Vince Larson / githubweb
Reduced the upper bound for wp2_min_array to 1.0 (#1214) — noreply / githubweb
Added up2 and vp2 to calculation of wp2_min_array (#1215) — noreply / githubweb
QuadTune: Add bar chart showing linear vs. nonlinear contributions of each parameter. — Vince Larson / githubweb
Changed default setting of flag l_min_wp2_from_corr_wx to false (#1216) — noreply / githubweb
QuadTune: Add map plots of "linSoln" output from global E3SM runs. — Vince Larson / githubweb
QuadTune: Include special regions (DYCOMS, HAWAII, etc.), in addition to 20x20 regions. However, the weights are set to epsilon, which wrecks the loss calculation. This will have to be remedied later. — Vince Larson / githubweb
Recoded a loop within the mono flux limiter so that it's written — bmg2 / githubweb
Changed some variable names so that it is clear that, while they contain — bmg2 / githubweb
Within the mono flux limiter, a thermodynamic-level variable needed to — bmg2 / githubweb
I forgot to add the new variable to the Atlantic Coast Conference — bmg2 / githubweb
Changing a couple loop limits in mono flux limiter. — bmg2 / githubweb
QuadTune: Remedy loss function and facilitate plotting of special, non-20x20 regions (DYCOMS, HAWAII, etc.). — Vince Larson / githubweb
Fix binormal correlation clipping (#1199) — noreply / githubweb
Added new hole-filling method which takes TKE from up2 and vp2 (#1217) — noreply / githubweb
Finally fixing gpu_diffness test (#1219) — noreply / githubweb
Slightly relaxing the convergence criteria to fix convergence test. — Gunther Huebler / githubweb
QuadTune: On matrix-eqn bar chart, plot only extraMetricsToPlot. Add sens-bias scatterplot of only extraMetricsToPlot. In parameter increments bar chart, change absolute values to squares. — Vince Larson / githubweb
QuadTune: Add useLongTitle option, which adds extra information on the plotted quantity, if desired. — Vince Larson / githubweb
QuadTune: Plot bias instead of negative bias on metricsBarChart and bias-vs-sensitivity plots. — Vince Larson / githubweb
Monoflux GPU optimization (#1221) — noreply / githubweb
QuadTune: Made plot_PcSensMap work when len(varPrefixes) > 1. — Vince Larson / githubweb
QuadTune: Merge in bootstrap sampling — noreply / githubweb
Swapping the loop order on a few kernels, I found this faster for the nvhpc compiler and it's BFB — Gunther Huebler / githubweb
BIT_CHANGING bug fix that only affects l_t_dependent cases running with multiple columns, I detected this with cgils cases, but I'm not sure how it slipped through initially. — Gunther Huebler / githubweb
Set l_wp2_fill_holes_tke to true by default (#1226) — noreply / githubweb
Remove err code (#1218) — noreply / githubweb
Renamed check_res to err_code in numerical_check.F90 for consistency (#1227) — noreply / githubweb
Revert clubb api module changes (#1228) — noreply / githubweb
Fixed equality check in pdf_closure_module (#1229) — noreply / githubweb
add dycore grid with conservative remapping scheme — noreply / githubweb

#342 (Feb 21, 2025, 10:14:44 AM)

Adding module file used for spack to sys_admin repo for safe keeping. https://github.com/larson-group/sys_admin/issues/829 — Gunther Huebler / githubweb
Updating larson-group.sh for recent spack+module system upgrade https://github.com/larson-group/sys_admin/issues/829 — Gunther Huebler / githubweb
Automated apache config backup. — Cole Pickett / githubweb
Using a symlink and find command to automate the lmod path setting. — Gunther Huebler / githubweb
Adding file used to create nightly plot index.html file. — Gunther Huebler / githubweb
Renaming plot and making clubb_silhs_devel also be displayed on top and default expanded on master. — Gunther Huebler / githubweb
Updating to account for new clubb directory structure in cam. — Gunther Huebler / githubweb
Updates to script and example template. — Gunther Huebler / githubweb
Adding if statement to avoid comparing the same commit to itself. — Gunther Huebler / githubweb

#340 (Feb 20, 2025, 11:36:01 AM)

Removed err_code module variable from error_code.F90 — Steffen Domke / githubweb

#338 (Feb 19, 2025, 11:01:22 AM)

Clubb Driver Semi GPUization Part4 (#1209) — noreply / githubweb
QuadTune: Plot a map of the change in the loss function for each region. — Vince Larson / githubweb
Fixed time-height plot colormaps (#1210) — noreply / githubweb
Multi col output update (#1211) — noreply / githubweb
QuadTune: Added colorbars to regional map plots. — Vince Larson / githubweb
QuadTune: 1) Change coloring of scatterpoints to represent either loss changes or residuals. 2) Add map of residuals to complement map of bias. — Vince Larson / githubweb
Likely non-bit-changing housekeeping (#1213) — noreply / githubweb
Fix pyplotgen timeheight cmaps (#1212) — noreply / githubweb
QuadTune: 1) Add bar chart that shows |metric_changes| due to each parameter. 2) Fix colorbars on maps. 3) Allow download of hi-res figures. 4) Make background of scatterplots grey. — Vince Larson / githubweb
Reduced the upper bound for wp2_min_array to 1.0 (#1214) — noreply / githubweb
Added up2 and vp2 to calculation of wp2_min_array (#1215) — noreply / githubweb
QuadTune: Add bar chart showing linear vs. nonlinear contributions of each parameter. — Vince Larson / githubweb
Changed default setting of flag l_min_wp2_from_corr_wx to false (#1216) — noreply / githubweb
QuadTune: Add map plots of "linSoln" output from global E3SM runs. — Vince Larson / githubweb
QuadTune: Include special regions (DYCOMS, HAWAII, etc.), in addition to 20x20 regions. However, the weights are set to epsilon, which wrecks the loss calculation. This will have to be remedied later. — Vince Larson / githubweb
Recoded a loop within the mono flux limiter so that it's written — bmg2 / githubweb
Changed some variable names so that it is clear that, while they contain — bmg2 / githubweb
Within the mono flux limiter, a thermodynamic-level variable needed to — bmg2 / githubweb
I forgot to add the new variable to the Atlantic Coast Conference — bmg2 / githubweb
Changing a couple loop limits in mono flux limiter. — bmg2 / githubweb
QuadTune: Remedy loss function and facilitate plotting of special, non-20x20 regions (DYCOMS, HAWAII, etc.). — Vince Larson / githubweb
Fix binormal correlation clipping (#1199) — noreply / githubweb
Added new hole-filling method which takes TKE from up2 and vp2 (#1217) — noreply / githubweb
Finally fixing gpu_diffness test (#1219) — noreply / githubweb
Slightly relaxing the convergence criteria to fix convergence test. — Gunther Huebler / githubweb
QuadTune: On matrix-eqn bar chart, plot only extraMetricsToPlot. Add sens-bias scatterplot of only extraMetricsToPlot. In parameter increments bar chart, change absolute values to squares. — Vince Larson / githubweb
QuadTune: Add useLongTitle option, which adds extra information on the plotted quantity, if desired. — Vince Larson / githubweb
QuadTune: Plot bias instead of negative bias on metricsBarChart and bias-vs-sensitivity plots. — Vince Larson / githubweb
Monoflux GPU optimization (#1221) — noreply / githubweb
QuadTune: Made plot_PcSensMap work when len(varPrefixes) > 1. — Vince Larson / githubweb
QuadTune: Merge in bootstrap sampling — noreply / githubweb
Swapping the loop order on a few kernels, I found this faster for the nvhpc compiler and it's BFB — Gunther Huebler / githubweb
BIT_CHANGING bug fix that only affects l_t_dependent cases running with multiple columns, I detected this with cgils cases, but I'm not sure how it slipped through initially. — Gunther Huebler / githubweb
Set l_wp2_fill_holes_tke to true by default (#1226) — noreply / githubweb
Sneaky commit — Steffen Domke / githubweb
Fixing ordering of parameter lists in clubb_driver — Steffen Domke / githubweb

#337 (Feb 19, 2025, 9:48:42 AM)

Sneaky commit. Ssshhhhhh — Steffen Domke / githubweb
Added messages to error stops in clubb_api_module — Steffen Domke / githubweb

#336 (Feb 18, 2025, 3:17:41 PM)

Fixed clubb_driver and removed a couple unused imported variables — Steffen Domke / githubweb

#335 (Feb 18, 2025, 3:12:15 PM)

Several small fixes — Steffen Domke / githubweb

#333 (Jan 28, 2025, 10:08:17 AM)

add acc annotations for parallel loop execution — 0-freundlich-adenin / githubweb

#332 (Jan 28, 2025, 9:35:18 AM)

add acc annotation for parallel loop — 0-freundlich-adenin / githubweb

#331 (Jan 27, 2025, 3:47:37 PM)

remove acc annotation again — 0-freundlich-adenin / githubweb

#330 (Jan 27, 2025, 3:38:15 PM)

add acc annotation for gpu — 0-freundlich-adenin / githubweb

#329 (Jan 27, 2025, 2:10:10 PM)

remove new gpu commands — 0-freundlich-adenin / githubweb

#326 (Jan 21, 2025, 1:47:22 PM)

Overwriting correct variable. — Gunther Huebler / githubweb

#321 (Dec 20, 2024, 4:05:21 AM)

Undoing accidental changes — Gunther Huebler / githubweb

#318 (Dec 19, 2024, 12:53:28 PM)

Added stats updates for up2_pd and vp2_pd budget terms around new hole-filling method — Steffen Domke / githubweb

#315 (Dec 3, 2024, 9:49:45 AM)

Likely non-bit-changing housekeeping (#1213) — noreply / githubweb
Reduced the upper bound for wp2_min_array to 1.0 — Steffen Domke / githubweb

#314 (Dec 2, 2024, 2:16:56 PM)

Trying to fix OpenACC, part 5 — Steffen Domke / githubweb

#313 (Dec 2, 2024, 2:04:03 PM)

Trying to fix OpenACC, part 4 — Steffen Domke / githubweb

#312 (Dec 2, 2024, 1:57:40 PM)

Trying to fix OpenACC, part 2 — Steffen Domke / githubweb

#311 (Dec 2, 2024, 1:45:32 PM)

Trying to fix OpenACC, part 2 — Steffen Domke / githubweb

#310 (Dec 2, 2024, 1:37:21 PM)

Adjusted debug_level checks, trying to fix OpenACC — Steffen Domke / githubweb

#308 (Nov 22, 2024, 2:20:24 AM)

Update to jenkins test — Gunther Huebler / githubweb

#307 (Nov 22, 2024, 2:15:17 AM)

Making new jenkins script run single and double precision tests. — Gunther Huebler / githubweb

#303 (Nov 21, 2024, 12:27:13 AM)

Removing accidentally added file. — Gunther Huebler / githubweb

#299 (Nov 21, 2024, 12:23:44 AM)

Adding capability to output multi_col as double or single precision using new flag l_output_double_prec. — Gunther Huebler / githubweb

#297 (Nov 19, 2024, 8:15:56 PM)

Script update — Gunther Huebler / githubweb

#296 (Nov 19, 2024, 7:58:23 PM)

Script update — Gunther Huebler / githubweb

#295 (Nov 19, 2024, 7:50:09 PM)

Script updates — Gunther Huebler / githubweb

#290 (Nov 14, 2024, 5:19:37 PM)

Adding GPU locking to rest of GPU tests. — Gunther Huebler / githubweb

#289 (Nov 14, 2024, 4:57:34 PM)

Adding option to multi_col diff check script to scale the differences by the field avg. This is only needed (so far) for thlm differences that are slightly too large — Gunther Huebler / githubweb
Testing gpu lock method — Gunther Huebler / githubweb

#288 (Nov 14, 2024, 3:31:19 PM)

Fixx ACC (part 3) Declare clubb_debug_level to ACC — Steffen Domke / githubweb

#286 (Nov 14, 2024, 1:51:54 AM)

Small cleanup — Gunther Huebler / githubweb

#285 (Nov 14, 2024, 1:34:32 AM)

Updating tolerance in script to handle rico_silhs differences, and hopefully final GPU updates — Gunther Huebler / githubweb

#284 (Nov 14, 2024, 1:22:54 AM)

Updating script — Gunther Huebler / githubweb

#283 (Nov 14, 2024, 1:07:56 AM)

Updating script — Gunther Huebler / githubweb

#282 (Nov 14, 2024, 12:57:41 AM)

Updating script — Gunther Huebler / githubweb

#281 (Nov 14, 2024, 12:32:34 AM)

Removing accidentally added file. — Gunther Huebler / githubweb

#274 (Nov 14, 2024, 12:22:17 AM)

Reworking some SILHS GPUization to make it more similar to the GPU code in the rest of clubb. This adds some extra parts that run on GPUs, so it is BIT_CHANGING — Gunther Huebler / githubweb
Cleanup and comment update — Gunther Huebler / githubweb
Cleanup — Gunther Huebler / githubweb
Removing DCUDA flag from compile config scripts to help GPU and CPU results match for silhs cases — Gunther Huebler / githubweb

#273 (Nov 13, 2024, 10:19:13 PM)

Making new monoflux test lines — Gunther Huebler / githubweb

#272 (Nov 13, 2024, 8:07:32 PM)

Adding new flags to the mono_flux test to prevent CPU and GPU divergence which breaks it. — Gunther Huebler / githubweb
Small changes and improvements. — Gunther Huebler / githubweb

#270 (Nov 12, 2024, 6:15:09 PM)

Fixing OpenACC (2.5th try) — Steffen Domke / githubweb

#269 (Nov 12, 2024, 6:08:18 PM)

Fix ACC(part 2) — Steffen Domke / githubweb

#268 (Nov 12, 2024, 5:27:04 PM)

Adding radht acc update — Gunther Huebler / githubweb
Updates — Gunther Huebler / githubweb

#267 (Nov 12, 2024, 5:17:27 PM)

Fix ACC — Steffen Domke / githubweb

#266 (Nov 12, 2024, 4:41:54 PM)

Adding multi_col cases to run_bindiff.py and adding new multicol BFBness test. — Gunther Huebler / githubweb
Renaming some jenkins tests and making them use a new directory — Gunther Huebler / githubweb
Changing test name to indicate that it runs on GPUs. — Gunther Huebler / githubweb
Fixed ACC error! — Steffen Domke / githubweb
Updates to jenkins scripts. — Gunther Huebler / githubweb
Updating script usage in plot tests. — Gunther Huebler / githubweb
I am making the loops for the wp3 ta term (using ADG1 PDF) symmetric. — bmg2 / githubweb
Added subroutine fill_holes_wp2_conservative — Steffen Domke / githubweb
Adjust acc directive, fixed floating point comparisons — Steffen Domke / githubweb

#265 (Nov 12, 2024, 4:10:00 PM)

Fixing OpenACC (2nd try) — Steffen Domke / githubweb

#264 (Nov 12, 2024, 3:28:33 PM)

Fixing OpenACC — Steffen Domke / githubweb

#258 (Nov 12, 2024, 1:38:41 PM)

advance_clubb_core tweaks — Gunther Huebler / githubweb

#254 (Nov 12, 2024, 12:28:17 PM)

Script update — Gunther Huebler / githubweb

#253 (Nov 12, 2024, 12:24:03 PM)

Final update to script — Gunther Huebler / githubweb

#252 (Nov 11, 2024, 11:47:07 PM)

Undoing accidental changes — Gunther Huebler / githubweb
Script update — Gunther Huebler / githubweb

#251 (Nov 11, 2024, 11:21:47 PM)

Removing non-gpu variables from acc update statements — Gunther Huebler / githubweb

#250 (Nov 11, 2024, 11:15:06 PM)

Removing accidentally added file. — Gunther Huebler / githubweb

#248 (Nov 11, 2024, 2:28:38 PM)

Script updates — Gunther Huebler / githubweb

#247 (Nov 11, 2024, 1:41:24 PM)

Script updates — Gunther Huebler / githubweb

#246 (Nov 11, 2024, 1:27:42 PM)

Script update — Gunther Huebler / githubweb

#245 (Nov 11, 2024, 1:12:33 PM)

Script update — Gunther Huebler / githubweb

#244 (Nov 11, 2024, 1:01:08 PM)

Script update — Gunther Huebler / githubweb

#243 (Nov 11, 2024, 12:54:50 PM)

Script update — Gunther Huebler / githubweb

#242 (Nov 11, 2024, 2:11:55 AM)

Script update — Gunther Huebler / githubweb

#241 (Nov 11, 2024, 2:01:52 AM)

Test error — Gunther Huebler / githubweb

#240 (Nov 11, 2024, 1:57:34 AM)

Test error — Gunther Huebler / githubweb

#239 (Nov 11, 2024, 1:53:49 AM)

Test error — Gunther Huebler / githubweb

#238 (Nov 11, 2024, 12:37:58 AM)

Script update — Gunther Huebler / githubweb

#237 (Nov 11, 2024, 12:34:22 AM)

Script update — Gunther Huebler / githubweb

#236 (Nov 11, 2024, 12:29:18 AM)

Script update — Gunther Huebler / githubweb

#235 (Nov 11, 2024, 12:25:44 AM)

Script update — Gunther Huebler / githubweb

#234 (Nov 11, 2024, 12:24:39 AM)

Script update — Gunther Huebler / githubweb

#233 (Nov 11, 2024, 12:23:49 AM)

Script update — Gunther Huebler / githubweb

#231 (Nov 3, 2024, 3:26:46 AM)

Adding Benchmark_cases to OMP conversion list — Gunther Huebler / githubweb

#230 (Nov 3, 2024, 2:54:09 AM)

Bug fix to minloc calculation affecting cases with l_modify_bc_for_cnvg_test=.true., unclear why this is a bug. Also adding ifdef around print in GPU code — Gunther Huebler / githubweb

#228 (Oct 23, 2024, 3:54:31 PM)

Trying to fix ACC error (4) — Steffen Domke / githubweb

#227 (Oct 23, 2024, 3:39:38 PM)

Trying to fix ACC error (3) — Steffen Domke / githubweb

#225 (Oct 22, 2024, 6:23:02 PM)

Trying to fix ACC error (2) — Steffen Domke / githubweb

#223 (Oct 22, 2024, 5:44:39 PM)

Trying to fix ACC error (1) — Steffen Domke / githubweb

#221 (Oct 21, 2024, 12:31:24 PM)

QuadTune: Revise PCA biplot and clarify how variables are masked. — Vince Larson / githubweb
add run_bindiff_w_flags.py script. #1181 pull request #1194 — noreply / githubweb
Fix time height plots (#1196) — noreply / githubweb
QuadTune: De-bias matrix before calculating parameter correlations, add comments about definition of residual, include metric name in hover text. — Vince Larson / githubweb
QuadTune: De-bias matrix before calculating parameter correlations, add comments about definition of residual, include metric name in hover text. — Vince Larson / githubweb
QuadTune: Use SVD to approximate the sensitivity matrix, `normlzdSensMatrixPoly`, and curvature matrix, `normlzdCurvMatrix`. — Vince Larson / githubweb

#220 (Oct 21, 2024, 12:13:49 PM)

QuadTune: Create SVD plot, start to add checks on global means (unfinished), and start to add capability to include multiple fields (SWCF, LWCF, etc.) in metrics (unfinished). — Vince Larson / githubweb
add Lscale intent(out) to advance_clubb_core and advance_clubb_core_api (#1190) — noreply / githubweb
Bindiff script (#1191) — noreply / githubweb
Added min_max_smth_mag as a Fortran parameter to constants_clubb.F90 (#1192) — noreply / githubweb
QuadTune: Allow QuadTune to simultaneously tune for multiple 20x20 fields, e.g., SWCF, LWCF, and PRECT. — Vince Larson / githubweb
Added rcm-background to pyplotgen animations (#1195) — noreply / githubweb
Multicol CLUBB (#1193) — noreply / githubweb
remove Lscale, Lscale_up, Lscale_down from stat_fields_reader — 0-freundlich-adenin / githubweb

#219 (Oct 16, 2024, 9:41:10 PM)

Removing C1 from list of variables to change, it was breaking the CPU vs GPU test, and also clubb warns that 'l_damp_wp2_using_em = T requires C1=C14 and l_stability_correct_tau_zm = F', so perhaps chaning it is just unstable. I've confirmed that GPU bugs are still dectable though. — Gunther Huebler / githubweb

#211 (Oct 15, 2024, 5:03:31 PM)

Renaming script — Gunther Huebler / githubweb

#210 (Oct 15, 2024, 4:44:45 PM)

Renaming script — Gunther Huebler / githubweb

#209 (Oct 15, 2024, 4:42:50 PM)

Small cleanup and renaming of read_parameters — Gunther Huebler / githubweb
Slight update to ifdef NETCDF statement — Gunther Huebler / githubweb
Better change to ifdefs — Gunther Huebler / githubweb
Adding new name init_read_clubb_params_api to public api list — Gunther Huebler / githubweb
Name changes and adding section in README — Gunther Huebler / githubweb

#207 (Oct 10, 2024, 7:08:36 PM)

Bug fix to script — Gunther Huebler / githubweb

#206 (Oct 10, 2024, 7:06:11 PM)

Tightening tolerance — Gunther Huebler / githubweb
Script cleanup and improvement — Gunther Huebler / githubweb
Some more slight changes and cleanup. Making monoflux script work with new multicol mode. — Gunther Huebler / githubweb
Small bug fix that was breaking bugsrad when using multiple columns. — Gunther Huebler / githubweb

#205 (Oct 10, 2024, 2:40:59 AM)

Jenkins script update — Gunther Huebler / githubweb

#204 (Oct 10, 2024, 2:37:07 AM)

Jenkins script update — Gunther Huebler / githubweb

#203 (Oct 10, 2024, 2:33:46 AM)

Jenkins script update — Gunther Huebler / githubweb

#202 (Oct 10, 2024, 2:30:13 AM)

Jenkins script update — Gunther Huebler / githubweb

#201 (Oct 10, 2024, 2:27:12 AM)

Jenkins script update — Gunther Huebler / githubweb

#199 (Oct 10, 2024, 2:25:37 AM)

Jenkins script update — Gunther Huebler / githubweb

#196 (Oct 3, 2024, 9:11:19 PM)

Fix for uninitialized value in stats call and use of zero over 0.0_core_rknd — Gunther Huebler / githubweb

#195 (Oct 3, 2024, 8:45:03 PM)

Small bug fix — Gunther Huebler / githubweb

#193 (Oct 3, 2024, 3:46:45 PM)

Adding descriptions, cleanup, and name change to indiciate this is a GPU test. — Gunther Huebler / githubweb

#191 (Oct 1, 2024, 2:19:45 PM)

More copyout removals — Gunther Huebler / githubweb

#190 (Oct 1, 2024, 11:08:40 AM)

combine intent in and out parameters from calc_trapezoid_zm and calc_trapezoid_zt to intent inout parameters — 0-freundlich-adenin / githubweb
remove unused functions init_parameters_999 and sat_vapor_press_ice_* — 0-freundlich-adenin / githubweb

#189 (Sep 30, 2024, 7:05:13 PM)

Adding needed copyouts around calls to GPU functions. — Gunther Huebler / githubweb

#188 (Sep 30, 2024, 5:49:04 PM)

Removing a couple more unneeded data statements — Gunther Huebler / githubweb

#184 (Sep 24, 2024, 2:03:08 PM)

QuadTune: Add check of global-mean SWCF OBS, plus clean up unneeded comments. — Vince Larson / githubweb
reduce compiler warnings (#1180) — noreply / githubweb

#183 (Sep 24, 2024, 1:08:35 PM)

refactor code to remove compiler warnings for exceeding 100 characters per line and unused variables and parameters (#1179) — noreply / githubweb
remove unused dummy arguments — 0-freundlich-adenin / githubweb
make small changes to reduce compiler warnings — 0-freundlich-adenin / githubweb
put solve_name back in as input variable to band_solve methods — 0-freundlich-adenin / githubweb

#182 (Sep 20, 2024, 11:11:24 AM)

For RegTune, adds quadratic curves to three-dot plot. — Vince Larson / githubweb
For RegTune, defaults to polynomial fit for sensitivity matrix — Vince Larson / githubweb
In RegTune, normalizes metrics by a user-specified number — Vince Larson / githubweb
For RegTune, adds color-coded matrix of correlations among parameter vectors. — Vince Larson / githubweb
For clarity, renames figures in RegTune. — Vince Larson / githubweb
Creates new function, setUpPreliminaries, in RegTune. — Vince Larson / githubweb
For RegTune, adds capability to prescribe (not tune) a parameter — Vince Larson / githubweb
Hides print statements in RegTune by using beVerbose=False. — Vince Larson / githubweb
Fixes bug in QuadTune's code that prescribes parameter values. — Vince Larson / githubweb
Adds basic cost function printouts to QuadTune. — Vince Larson / githubweb
QuadTune: refactored to use more subroutines — Vince Larson / githubweb
Fixed some oversights for the bv_efold commits and increased string length for tuning field names for invrs_tau variables - CLUBB ticket #1069 (#1106) — noreply / githubweb
BIT_CHANGING! brunt_vaisala_freq_sqd_mixed now replaces brunt_vaisala_freq_sqd for later calculations - CLUBB ticket #1102 — noreply / githubweb
Added option to plot "Lumped Buoyance Budgets" (wpxp_bp combined with — bmg2 / githubweb
Added a statement that I had previously omitted. The new combined budget — bmg2 / githubweb
Updating pyplotgen to include a "contour" plot of rcm in the background. — bmg2 / githubweb
I added the --background-rcm optional flag to pyplotgen. — bmg2 / githubweb
Small additions that allow all cases to run with pyplotgen. — bmg2 / githubweb
Needed to remove a print statement. — bmg2 / githubweb
In the previous commits for the --background-rcm option of pyplotgen, — bmg2 / githubweb
I am updating the --background-rcm option of pyplotgen to make two — bmg2 / githubweb
BIT_CHANGING for lscale setup. Updated configurable_model_flags.in and model_flags.F90 - CLUBB ticket #1102 (#1108) — noreply / githubweb
QuadTune: Adds chisqd metric and bar chart for a global run. — Vince Larson / githubweb
QuadTune: adds commented-out attempt to vary the bar base — Vince Larson / githubweb
Likely BIT_CHANGING because of added output fields. Added code outputting C6_term and different Brunt Vaisala frequencies to disk - CLUBB ticket #1102 (#1109) — noreply / githubweb
Changed sqrt_Ri_zm to Ri_zm in preparation of changing the exponent for calculation of invrs_tau_wpxp_zm in mixing_length.F90 - CLUBB ticket #1102 (#1110) — noreply / githubweb
BIT_CHANGING! Removed Richardson_num and all corresponding code - CLUBB ticket #1102 (#1111) — noreply / githubweb
QuadTune: Adds fnc to plot a horizonal bar chart for metrics. — Vince Larson / githubweb
QuadTune: Includes full perturbation in params bar chart — Vince Larson / githubweb
QuadTune: Adds new parameter correlation matrix plot. — Vince Larson / githubweb
Major overhaul of run_bindiff_all.py — noreply / githubweb
Tunable Richardson number exponent - CLUBB ticket #1102 (#1114) — noreply / githubweb
Removes blank line in order to trigger nightly tests. — noreply / githubweb
Deletes svn id tag, will trigger host-model nightly tests. — noreply / githubweb
Remove svn id tag in order to trigger nightly tests. — noreply / githubweb
Removed 3rd svn id tag in order to trigger nightly tests — noreply / githubweb
Finally removing scratch variables. (#1116) — noreply / githubweb
Making run_bindiff_all.py an executable. — Gunther Huebler / githubweb
QuadTune: Imposes lower bound of 0 on tuned parameter values. — Vince Larson / githubweb
QuadTune: Adds marker for residual bias on metrics bar chart. — Vince Larson / githubweb
QuadTune: Updates setup to reproduce results from sens0707 sample 34. — Vince Larson / githubweb
Latest batch of non-bit changing code changes - CLUBB ticket #1115 (#1119) — noreply / githubweb
BIT_CHANGING! Fixed some issues with wpxp_Ri_exp, changed z_displace value - CLUBB ticket #1115 (#1120) — noreply / githubweb
Updated CLUBB so that adj_low_res_nu (which can be called on its own — bmg2 / githubweb
Removing begin_height and end_height as outputs from setup_grid. They — bmg2 / githubweb
Z displace tunable (#1122) — noreply / githubweb
Quick fix for AnimationPanel so it works with the background-rcm changes (#1123) — noreply / githubweb
New Stats Indices Type (#1118) — noreply / githubweb
stats_metadata needs to be threadprivate to make our standalone thread test work. — Gunther Huebler / githubweb
Changing order of sqrt and **3 to improve stability, see clubb#1126. Since this is a change to the order of operations, it is BIT_CHANGING. — Gunther Huebler / githubweb
Setting the minimum tolerance to be epsilon, this is BIT_CHANGING but only for single precision. See larson-group/clubb#1126 — Gunther Huebler / githubweb
BIT_CHANGING! Updated taus code calculations - CLUBB ticket #1115 (#1125) — noreply / githubweb
Added non-trapezoidal zm interpolation for cloud_frac (#1127) — noreply / githubweb
Added new utility script print_tunable_parameters_table.py (#1130) — noreply / githubweb
Re-adjusted cap for invrs_tau_wpxp in src/CLUBB_core/mixing_length.F90 — Steffen Domke / githubweb
Adding boundary conditions for the wp3_term_ta_ADG1_lhs subroutine. — Brian Griffin / githubweb
For single loop vectors, removing the "collapse(2)" from the acc statements. — Brian Griffin / githubweb
Added new Brunt-Väisälä frequency plots to pyplotgen's VariableGroupTaus — Vince Larson / githubweb
Adds commas to fix bug — noreply / githubweb
QuadTune: updates setup in order to read in 30x30 — Vince Larson / githubweb
Updating the code to set the bottom of the thermodynamic level grid for — Brian Griffin / githubweb
Commit to enforce a fixed-point boundary condition of wp3=0 at — Brian Griffin / githubweb
With wp3 now being set to a fixed-point boundary condition value — bmg2 / githubweb
Threadpublic (#1133) — noreply / githubweb
Removing awkward nan check in favor of a default for Ncnp2_on_Ncnm2 — Gunther Huebler / githubweb
Initial creation of gpu vs cpu output comparison jenkins test — Gunther Huebler / githubweb
Adding clean step before compiling GPU to new jenkins test — Gunther Huebler / githubweb
Making script check the specific multicore files — Gunther Huebler / githubweb
Adding more cases to test — Gunther Huebler / githubweb
Adding new argument list variables to openacc copyin statements — Gunther Huebler / githubweb
Limiting gabls2 to 500 timesteps in new jenkins test — Gunther Huebler / githubweb
Changing sclr test case to cobra, keeping 500 timestpes, gabls2 appears less stable as a result of commit 77ce77409e9da770515f66bbb50a869da74aca7d — Gunther Huebler / githubweb
Setting l_smooth_Heaviside_tau_wpxp to .true. by default — Gunther Huebler / githubweb
Undoing accidental changes to compiler config — Gunther Huebler / githubweb
BIT_CHANGING:1ce764cad4ea41e739b6ce9d95d8bec7db72097f — bmg2 / githubweb
Making nightly cpu vs gpu test use a new config script for the cpu compile. This is the minimize the differences to be only whether or not the openacc GPU code is enabled. — Gunther Huebler / githubweb
Limiting mpace_b to 250 timestpes for gpu vs cpu test. The mpace_b test passed on my home GPU (RTX 3080), but not when run in jenkens on nelson (P4000). So either the tolerance is too strict, or we're running too many timesteps for mpace_b. Currently the largest difference on mpace_b multicol check is 3.31551e-05 on jenkins, so if this fails also I'll up the tolerance for mpace_b instead of further reducing timesteps run. — Gunther Huebler / githubweb
I am altering the mean advection code in preparation for ghost point — bmg2 / githubweb
Fixing bug. See https://github.com/larson-group/clubb/issues/1139 — Gunther Huebler / githubweb
Fixing tridiag solver bug. See https://github.com/larson-group/clubb/issues/1139 — Gunther Huebler / githubweb
Slight rework to acc data statements. This allows us to use return calls in advance_clubb_core again. See https://github.com/larson-group/clubb/issues/1139 — Gunther Huebler / githubweb
Fixing small GPU stats bug — Gunther Huebler / githubweb
Changing xm to out in mono flux solver. There is no need for it to be inout, and it confused me for a bit so I'm fixing it. — Gunther Huebler / githubweb
Adding clubb specific compiler flag -DCLUBB_GPU, intended for use with openmp or openacc running on the GPU. Also adding a compiler flags, -DCUDA, and case statment for generating random numbers in silhs. — Gunther Huebler / githubweb
Adding new compiler flags to nvfortran GPU compile script — Gunther Huebler / githubweb
Adding openacc to openmp conversion script, and making some new compiler config files. — Gunther Huebler / githubweb
Adds comments to openmp conversion script — noreply / githubweb
Now that the value of wp3 is being set to a boundary value of 0 — bmg2 / githubweb
This is (amazingly) BIT_CHANGING. The differences are due to some compiler optimizations, see https://github.com/larson-group/clubb/pull/1133\#issuecomment-1865156979. — Gunther Huebler / githubweb
Removing git log print before logging to file. On some systems/configs the command would cause a busy wait until the person running hit q, and it is superfluous since we are already saving the git log to a file. — Gunther Huebler / githubweb
Removing backslashes. These should be slashes, but gnu,intel,nvidia generate code that treats slashes as whitespace and backslashes as a character, while cray treats backslashes as whitespace as well. This is easily fixed by using quotes, and in the meantime we will change the backslashes to forward slashes. See https://github.com/larson-group/clubb/issues/1138\#issuecomment-1910844013 — Gunther Huebler / githubweb
Adding ifdefs around multicol netcdf outputting. — Gunther Huebler / githubweb
These should've been single quotes. I didn't tested a files with single quotes, then for some reason did all the changes as double quotes and only retested with gfortran. RESOLVED:9b495acd26a0b009ec84845aa289c36befff0c41 — Gunther Huebler / githubweb
Some files have tabs in them, this broke my previous sed commands in various spots. — Gunther Huebler / githubweb
Adding -no-declare-mapper to the openmp conversion script. This adds a sort of data mapper for derived types, but we just copy those in explicitly so they are unneccesary. They also cause problems for the cray compiler. — Gunther Huebler / githubweb
Some more places we need changes. — Gunther Huebler / githubweb
Hopefully the final sneaky error — Gunther Huebler / githubweb
Fixing a bug where the Lscale used in calculating the damping — bmg2 / githubweb
adding equals sign cuz I've had it up to here with this typo! — benjamin.andrew.stephens / githubweb
fixing bug, name of wm_zt was left as "wm" — Vince Larson / githubweb
README change to add BIT_CHANGING:595e2c13024c1e913815d56ae724823a82bddc03 when using l_diag_Lscale_from_tau=.false. and for the CAM repo we have BIT_CHANGING:d275ac17f3e53d65641c3210df33ce0fad4e5aef as the hash — Gunther Huebler / githubweb
Add blank line in order to trigger Jenkins tests for CAM — noreply / githubweb
Fixing restarts by changing wm to wm_zt, the stats output name was changed in 4b25d3a — Gunther Huebler / githubweb
Small acc tweaks (#1144) — noreply / githubweb
Removes comment about Numerical Recipes — noreply / githubweb
Adding new compile script for frontier+cray — Gunther Huebler / githubweb
OpenMP Optimizations (#1146) — noreply / githubweb
Adding comment to explain unusual code choice. — Gunther Huebler / githubweb
Adding sum part to comment — Gunther Huebler / githubweb
Putting ngrdcol in clubb_params (#1147) — noreply / githubweb
Fixing bug with C6 parameters, see https://github.com/larson-group/clubb/pull/1147. This is technically BIT_CHANGING, but only when C6thl != C6thlb and l_diag_Lscale_from_tau=.false. — Gunther Huebler / githubweb
Adding space to make commit because last commit RESOLVED:35d228ebbb66b1463f30659321cd4f7d76adffa2 — Gunther Huebler / githubweb
Fixing a bug. These directives get added when running the ACC to OMP conversion script. I'm unsure how I accidentally commited this, and equally unsure of how only one file is affected. This was found while debugging the clubb thread test — Gunther Huebler / githubweb
At the ghost point below the surface, which does not matter in — bmg2 / githubweb
The code that advances um and vm when l_predict_upwp_vpwp is turned off — bmg2 / githubweb
It was discovered that the location where the ghost point values — bmg2 / githubweb
I accidentally committed a couple things in the previous commit — bmg2 / githubweb
Pushing loop into calc_ref_z_linear_thvm to prevent erroneous inlining optimizations by nvfortran. This is BFB on nvhpc 24.3 with -O0 and BFB on nvhpc 22.5 with -O2. https://github.com/larson-group/clubb/issues/1148 — Gunther Huebler / githubweb
Making commit to test jenkins. — Gunther Huebler / githubweb
Making change to add RESOLVED:a492228d3adfed56f8777d12176fcd7d165260f6, which was technically bit changing because it undid changes to the config flags AND was tested relative to the previous commit (which introduced the flag changes) because that one was labelled as bit changing. — Gunther Huebler / githubweb
While it doesn't affect results, I fixed what appears to be an — bmg2 / githubweb
I am updating the loop in subroutine diagnose_xpwp so that it doesn't — bmg2 / githubweb
This commit is being made to keep the stats zt output from the — bmg2 / githubweb
I am committing a bug fix to the code that calculates mixed Brunt — bmg2 / githubweb
Adding -noacc to nvhpc openmp config script, sometimes nvhpc compiles acc code automatically, and this shuts it off. — Gunther Huebler / githubweb
I am committing a stats change to the ghost point values of zt — bmg2 / githubweb
Committing some thresholding around positive-definite fields after — bmg2 / githubweb
Changing the linear interpolation in the zt2zm function at momentum — bmg2 / githubweb
I'm changing the way ddzt handles the derivative over momentum level 1. — bmg2 / githubweb
Adding space to include BIT_CHANGING:84588a46852a812266d19e36a8220f71ad56043a. This (https://github.com/larson-group/clubb/commit/84588a46852a812266d19e36a8220f71ad56043a) is described as not bit changing, but that seems to depend on the compiler version and some flags. The bin diff tests detected differences in only twp_ice when using e3sm flags on nelson, and both e3sm flags and default flags on carson. — Gunther Huebler / githubweb
Moved the ghost-point setting of xm(1) = xm(2) to the last line — bmg2 / githubweb
Optional arguments are just best sometimes (#1150) — noreply / githubweb
Fixing bug. RESOLVED:556370c6406e6b943b88affbe7728a5036b1ba22, this was catchable by using debugging flags, but seems to otherwise cause no issues. Investigating I found that it only clips the below ground level, so that must not have been affecting other levels. This is technically BIT_CHANGING since it resolves an issue. — Gunther Huebler / githubweb
Making num_draw_points in fill_holes a constant. We were already using this value as a constant everywhere, but passing a constant by argument list makes it difficult/impossible for a compiler to optimize using that constant, unless it does inlining. Now, rather than passing the constant num_hf_draw_points (or sometimes a hardcoded 2) we just use num_hf_draw_points directly from constants_clubb. This massively improves the performance of a loop in fill holes when using nvhpc+omp, which was the motivation for this, but should also improve the performance on CPUs. Everything is BFB. — Gunther Huebler / githubweb
Making compatible with latest clubb changes. — Gunther Huebler / githubweb
Raw-copy updating src/Morrison_microphys — Cole Pickett / githubweb
I am committing code that effectively ignores the values of certain — bmg2 / githubweb
I am moving the advance_xm_wpxp setting of xm(1) = xm(2) from the — bmg2 / githubweb
Jupyter Notebooks for proving formulas (#1151) — noreply / githubweb
Adding extra exclamation to acc statement to comment it out. — Gunther Huebler / githubweb
gr%zm should be used here instead of gr%zt, since these are — bmg2 / githubweb
Thermodynamic-level (zt) values should be used with zt-variable — bmg2 / githubweb
Fixing small GPU bug in advance_xm, also fixing a bug with sclrpthvp that's only detectable when were running 1 column on GPUs. — Gunther Huebler / githubweb
Fixing a bug. Does not change default results. — bmg2 / githubweb
QuadTune: Brings in CAM regional files. — Vince Larson / githubweb
The variable rc_coef_zm needed to be passed in and saved from — bmg2 / githubweb
QuadTune: Moves plotting code to new fnc, createFigs. — Vince Larson / githubweb
Making the f in f90 capital for consistency. — Gunther Huebler / githubweb
Surrounding print statement with debug flag check. — Gunther Huebler / githubweb
Making multicol diffness script rely on the largest difference detected, rather the the sum/total of differences. This is essentially to relax the cpu vs gpu diffness test because mpace_b is noisey and often causes the test to fail for innocent bit changing commits. Looking at the largest difference does have the advantage of the check being less sensitive to case differences, such as number of timesteps, vertical levels, number of columns, etc. — Gunther Huebler / githubweb
Making the only change required to make clubb run with openacc in cam. — Gunther Huebler / githubweb
QuadTune: Removes LWCF and PRECT from 2-point dpMin plot. — Vince Larson / githubweb
I fixed a bug where the array declarations for X_mixt_comp_all_levs, — bmg2 / githubweb
QuadTune: Customizes inputs to threeDotFig. — Vince Larson / githubweb
QuadTune: Customizes metrics shown in parameter adjustment bar chart. — Vince Larson / githubweb
QuadTune: Clarifies some plot titles. — Vince Larson / githubweb
QuadTune: Uses flags to shut off calculations for unwanted plots. — Vince Larson / githubweb
Making CPU vs GPU jenkins test compare openmp code also. — Gunther Huebler / githubweb
This allows the conversion script to be called anywhere. — Gunther Huebler / githubweb
Fixing bug in jenkinsfiles. — Gunther Huebler / githubweb
Ri zm calc (Part 1) - Combine and move call to calc_brunt_vaisala_freq_sqd (#1154) — noreply / githubweb
Ri_zm calc (Part 1.5) - Adjusted signature of diagnose_Lscale_from_tau #1145 (#1155) — noreply / githubweb
Adds blank line so that I can note BIT_CHANGING:5df5fcb3d6c51d6af2e8017d270336eefa75ad3e — noreply / githubweb
QuadTune: Adds more flags to toggle plots. — Vince Larson / githubweb
This commit fixes 2 issues in regards to hydrometeor sedimentation: — bmg2 / githubweb
Updated the turbulent sedimentation code to account for ghost point — bmg2 / githubweb
QuadTune: Feeds in 20degree_CAM_TAUS_202404 runs. — Vince Larson / githubweb
QuadTune: Feeds in 20degree_CAM_TAUS_2020404, take 2. — Vince Larson / githubweb
Ri_zm calc (Part 2) - Move the brunt_vaisala smoothing into calc_brunt_vaisala_freq_sqd (#1156) — noreply / githubweb
Testing the new module system with our GPU diffness test. See https://github.com/larson-group/sys_admin/issues/829 — Gunther Huebler / githubweb
The module system is setup via paths in /etc/profile.d/larson-group.sh, so we need to source it. https://github.com/larson-group/sys_admin/issues/829 — Gunther Huebler / githubweb
Fixing bug in jenkinsfiles. — Gunther Huebler / githubweb
Spack updates (#1158) — noreply / githubweb
Making our mkl compile config work directly in the compile script rather than relying on a correspondence with the config files. Also settig main config scripts to use new ifx compiler. — Gunther Huebler / githubweb
Removing allocatable status of some variables. These need not be declared allocatable and ifx seems to have a problem with it. The allocatable status is an artifact from when we had these as arrays of initially unknown size. — Gunther Huebler / githubweb
Fixing the run agent to be carson, since it has the only GPU capable of running with openmp gpu offloading. — Gunther Huebler / githubweb
Making jenkins bit diff tests only run on carson. This is because these tests are defined by a file we store on carson that needs to be updated after each test. — Gunther Huebler / githubweb
Replacing pgi references with nvhpc, and adding nvhpc_debug config script along with new jenkins tests. — Gunther Huebler / githubweb
Removing flag meant for gpu debugging. — Gunther Huebler / githubweb
This code in adj_low_res_nu was using the ghost point when — bmg2 / githubweb
This technically BIT_CHANGING commit is being made to keep results in — bmg2 / githubweb
I am updating the SILHS code that calculates k_lh_start to work — bmg2 / githubweb
QuadTune: Adds arrow plot and plot of bias vs. a diagnostic field such as U10. — Vince Larson / githubweb
I am making this commit because, as part of deghosting, I discovered 2 — bmg2 / githubweb
I am updating the snowslope output stat so it matches bit-for-bit — bmg2 / githubweb
Setting the value of K_hm to 0 at the non-interactive upper and lower — bmg2 / githubweb
I am committing changes to stats output for cloud_cover, rcm_in_layer, — bmg2 / githubweb
There were furhter issues found with the k_lh_start code. — bmg2 / githubweb
Ri_zm calc (Part 3) - Moving calculations for Ri_zm out of diagnose_Lscale_from_taus (#1157) — noreply / githubweb
In my previous commit, I changed the domain of the maxloc commands — bmg2 / githubweb
This commit brings the stats output from the all cases run with — bmg2 / githubweb
Updates README so that I can note that BIT_CHANGING:9ca167aa8b04cbebe4a1177a72f13731454e1e11 — noreply / githubweb
Committing a change that will initialize this set of variables — bmg2 / githubweb
Making a change to the l_C2_cloud_frac option with advance_xp2_xpyp. — bmg2 / githubweb
Fixing bug. qclvar copying is handled by the api, but we were deleting it with an unstructured data statement. I added this due as a fix before thinking qclvar was a local variable, which happened because I mixed up the CLUBB_CAM and CLUBBND_CAM flags. https://github.com/larson-group/cam/issues/175 — Gunther Huebler / githubweb
When l_vert_avg_closure is enabled, the flags l_call_pdf_closure_twice, — bmg2 / githubweb
Fixing GPU bug. There is a vertical dependency with wpxp. This is what was breaking the ECT test, see larson-group/cam#175 — Gunther Huebler / githubweb
Fixing bugs that are only caught when not outputting w_[up/down]_in_cloud stats or if l_host_applies_sfc_fluxes=.true. The l_host_applies_sfc_fluxes=.true. isn't testable (at least not in clubb_standalone), and I just caught that visually. The cloudy_updraft_frac and cloudy_downdraft_frac fields not being set were only noticable in cam, because we always run with iw_up_in_cloud>0 and iw_down_in_cloud>0 to output stats. — Gunther Huebler / githubweb
Moving pdf_params copying to copyin. This is the data structure that contains pointers, and these pointers will be different on the host and device, so it is bad in theory to copy the structure back to the CPU as it might overwrite cpu memory pointers with gpu memory pointers. In practice though I've seen no problems caused by this, I'm just making this commit preemptively, and it has already been tested with the ECT test. — Gunther Huebler / githubweb
Updating input fields so that the zt2zm function is used for — bmg2 / githubweb
Added zt2zm2zt-smoothing to remove noise in MPACE_B winds (#1161) — noreply / githubweb
Moving PosInf to clubb_model_settings.F90 — Gunther Huebler / githubweb
Changing openacc to openmp migration repo to a fork with a change to switch the order of copyins and copies. This is to allow us to only copyin the pdf_params structure, but copy the internal arrays. When the copying of the internal arrays happens first, followed by the copyin of the structure, we overwrite the pointers to the internal arrays on the GPU version of the structure. Hence why we want the copyins to precede the copy statements. — Gunther Huebler / githubweb
Updated for ghostless version of CLUBB. — bmg2 / githubweb
Nightly clubb plots (#1167) — noreply / githubweb
Slight variable name change in attempt to get the Update Master Output step to run. — Gunther Huebler / githubweb
Clubb ghost exorcism (#1159) — noreply / githubweb
Updated the README to explain the grid notations gr%nzm and gr%nzt, — bmg2 / githubweb
Raw-copy updating src/Morrison_microphys — Cole Pickett / githubweb
QuadTune: Plots subsets of 20x20-degree regions. — Vince Larson / githubweb
Small bugs fix in bugsrad code. This was only caught when compiling with intel debug and using '-warn all', which compares interface dimensions/declaration between files. — Gunther Huebler / githubweb
Variable name correction in acc data statement. — Gunther Huebler / githubweb
Splitting zeros_vector into versions with nzt or nzm size to match sizes in subroutine. — Gunther Huebler / githubweb
Making radf size correct in api and clubb_driver. — Gunther Huebler / githubweb
Updates pyplotgen's readme — noreply / githubweb
change opencv requirement to use headless and update Pillow minor — 0-freundlich-adenin / githubweb
Ri_zm calc (Part 4) - Implementing calc_Ri_zm (#1160) — noreply / githubweb
QuadTune: Use quadratic programming to calculate the smallest dparam needed to debias 2 regions. — Vince Larson / githubweb
Ri zm calc4 (#1168) — noreply / githubweb
Well, this will probably anger the Grim Reaper, but I have finally — bmg2 / githubweb
Update README so that it mentions run_bindiff_all.py — noreply / githubweb
Change variables from a1 and a3 to a1_coef and a3_coef — Vince Larson / githubweb
Updating tuner code to include an option to save all netcdf files (#1171) — noreply / githubweb
Update documentation for QuadTune. — noreply / githubweb
QuadTune: Add column parameter vector and equals sign to sens matrix equation plot. — Vince Larson / githubweb
change loop index to sclr and edsclr for sclr_dim and edsclr_dim (#1173) — noreply / githubweb
Ri zm calc5 (#1175) — noreply / githubweb
Removing duplicate definition of edsclr when CLUBB_CAM is defined. — Gunther Huebler / githubweb
Ri zm calc6 (#1177) — noreply / githubweb
QuadTune: Add check of global-mean SWCF. — Vince Larson / githubweb
refactor code to remove compiler warnings for exceeding 100 characters per line and unused variables and parameters (#1179) — noreply / githubweb

#181 (Sep 20, 2024, 10:39:14 AM)

Ri zm calc5 (#1175) — noreply / githubweb
Removing duplicate definition of edsclr when CLUBB_CAM is defined. — Gunther Huebler / githubweb
Ri zm calc6 (#1177) — noreply / githubweb
QuadTune: Add check of global-mean SWCF. — Vince Larson / githubweb
remove new unused parameters — 0-freundlich-adenin / githubweb

#180 (Sep 19, 2024, 3:59:03 PM)

remove unused parameters #1174 — 0-freundlich-adenin / githubweb
fix for the GPU — 0-freundlich-adenin / githubweb

#178 (Sep 19, 2024, 1:41:40 PM)

Removed commented out old code, fixed input list formatting for advance_xm_wpxp — Steffen Domke / githubweb

#176 (Sep 18, 2024, 12:04:02 PM)

Fixed acc directives — Steffen Domke / githubweb

#167 (Aug 22, 2024, 12:24:52 AM)

Fixing ANOTHER small bug. — Gunther Huebler / githubweb
Loop reorder. — Gunther Huebler / githubweb

#166 (Aug 21, 2024, 11:22:42 PM)

Small cleanup — Gunther Huebler / githubweb

#165 (Aug 21, 2024, 10:00:20 PM)

Another bug fix and cleanup. — Gunther Huebler / githubweb

#163 (Aug 21, 2024, 9:19:11 PM)

Small logic bug fix. — Gunther Huebler / githubweb

#161 (Aug 15, 2024, 11:42:34 PM)

Small update to pyplotgen to make title reflect name of output specified in command. — Gunther Huebler / githubweb
This cuda call doesn't work with the subscript for some reason. — Gunther Huebler / githubweb
Making only priority cases run for GPU plot test and preventin it from running on carson — Gunther Huebler / githubweb

#160 (Aug 15, 2024, 11:13:37 PM)

Clean up and naming changes. — Gunther Huebler / githubweb
Addin -O2 back. — Gunther Huebler / githubweb
Making only priority cases run for GPU plot test and preventin it from running on carson — Gunther Huebler / githubweb

#158 (Aug 15, 2024, 9:53:57 PM)

Making tests run all cases again and update master output only. — Gunther Huebler / githubweb

#157 (Aug 15, 2024, 8:59:37 PM)

Test — Gunther Huebler / githubweb

#156 (Aug 15, 2024, 8:52:45 PM)

Test — Gunther Huebler / githubweb

#155 (Aug 15, 2024, 8:16:15 PM)

Test — Gunther Huebler / githubweb

#154 (Aug 15, 2024, 7:56:55 PM)

Test — Gunther Huebler / githubweb

#153 (Aug 15, 2024, 7:51:16 PM)

Test — Gunther Huebler / githubweb

#152 (Aug 15, 2024, 7:48:21 PM)

Branch folder restructure. — Gunther Huebler / githubweb

#151 (Aug 12, 2024, 11:18:15 PM)

Test — Gunther Huebler / githubweb

#149 (Aug 12, 2024, 11:11:54 PM)

Test — Gunther Huebler / githubweb

#148 (Aug 12, 2024, 11:07:44 PM)

Setting O0 for testing — Gunther Huebler / githubweb

#147 (Aug 12, 2024, 11:01:54 PM)

Test — Gunther Huebler / githubweb

#146 (Aug 12, 2024, 10:59:04 PM)

Test — Gunther Huebler / githubweb

#145 (Aug 12, 2024, 10:57:43 PM)

Test — Gunther Huebler / githubweb

#144 (Aug 12, 2024, 10:53:11 PM)

Changes to allow plotting of previous output. — Gunther Huebler / githubweb

#143 (Aug 12, 2024, 4:36:35 PM)

Test — Gunther Huebler / githubweb

#142 (Aug 12, 2024, 4:29:05 PM)

Test — Gunther Huebler / githubweb

#139 (Aug 12, 2024, 3:37:24 PM)

Reverting diffness script, making new one specifically for plotting. — Gunther Huebler / githubweb

#138 (Aug 12, 2024, 2:11:27 PM)

Fixing error — Gunther Huebler / githubweb

#137 (Aug 12, 2024, 2:02:22 PM)

Adding plot step to nvhpc gpu diffness test. — Gunther Huebler / githubweb

#136 (Aug 10, 2024, 1:40:28 AM)

Making all cases run again and adding plot support for ifort. — Gunther Huebler / githubweb

#135 (Aug 10, 2024, 1:32:03 AM)

Update to create git_info line — Gunther Huebler / githubweb

#134 (Aug 10, 2024, 1:24:36 AM)

Undoing most pyplotgen changes. Making create_plot_list script general and take in a directory. Returning short run test mode. — Gunther Huebler / githubweb

#132 (Aug 10, 2024, 12:35:54 AM)

Making all cases run again. — Gunther Huebler / githubweb

#130 (Aug 10, 2024, 12:16:27 AM)

Testing single quotes — Gunther Huebler / githubweb

#129 (Aug 9, 2024, 11:48:32 PM)

Test — Gunther Huebler / githubweb

#128 (Aug 9, 2024, 11:46:11 PM)

Test — Gunther Huebler / githubweb

#127 (Aug 9, 2024, 11:42:42 PM)

Test — Gunther Huebler / githubweb

#126 (Aug 9, 2024, 11:25:32 PM)

More robust way to get git branch in pyplotgen. — Gunther Huebler / githubweb

#122 (Aug 9, 2024, 11:04:27 PM)

Test — Gunther Huebler / githubweb

#121 (Aug 9, 2024, 10:59:11 PM)

Test — Gunther Huebler / githubweb

#120 (Aug 9, 2024, 10:54:45 PM)

Test — Gunther Huebler / githubweb

#119 (Aug 9, 2024, 10:53:01 PM)

Making script only run arm again during testing. — Gunther Huebler / githubweb

#118 (Aug 9, 2024, 10:51:38 PM)

Script should handle the pyplotgen _generated_on_... suffix. — Gunther Huebler / githubweb

#117 (Aug 9, 2024, 10:49:24 PM)

Pyplotgen addition to create a git_info file containing branch and commit name. — Gunther Huebler / githubweb

#116 (Aug 9, 2024, 9:10:57 PM)

Test — Gunther Huebler / githubweb

#115 (Aug 9, 2024, 9:02:41 PM)

Test — Gunther Huebler / githubweb
Test — Gunther Huebler / githubweb

#114 (Aug 9, 2024, 9:00:18 PM)

Test — Gunther Huebler / githubweb

#113 (Aug 9, 2024, 8:54:45 PM)

Test — Gunther Huebler / githubweb

#112 (Aug 9, 2024, 8:47:58 PM)

Test — Gunther Huebler / githubweb

#111 (Aug 9, 2024, 8:31:26 PM)

Test — Gunther Huebler / githubweb

#110 (Aug 9, 2024, 8:28:30 PM)

Adding quotes are env variable usage — Gunther Huebler / githubweb

#109 (Aug 9, 2024, 8:20:28 PM)

Using jenkins env variables and switching to scp/ssh commands to allow plots to be generated and created on any machine. — Gunther Huebler / githubweb

#108 (Aug 9, 2024, 7:25:57 PM)

Copy needs -r — Gunther Huebler / githubweb

#107 (Aug 9, 2024, 7:23:45 PM)

Small fixes in pyplotgen. — Gunther Huebler / githubweb

#106 (Aug 9, 2024, 7:20:14 PM)

Small tweaks — Gunther Huebler / githubweb

#102 (Jul 3, 2024, 7:50:44 PM)

Part 2 to tuning test fix. It's unclear why the recent change caused top level directory for these stages to be in clubb, rather than the parent directory. Perhaps it has to do with the triple quote — Gunther Huebler / githubweb

#101 (Jul 3, 2024, 7:43:40 PM)

Possible fix for tuning test — Gunther Huebler / githubweb

#101 (Jul 3, 2024, 7:43:40 PM)

Adding intel source vars line to netcdf install script. Also changing hard coded version to latest, which is a symbolic link so should always be useable. larson-group/sys_admin#738 — Gunther Huebler / githubweb
Making check to see if baseline output exists before trying to delete. — Gunther Huebler / githubweb
Adding a sed command to the budget_balance bash script that will always set the l_lmm_stepping flag to false, since that flag does not currently give balanced budgets. — benjamin.andrew.stephens / githubweb
Changing iptables script to look at the correct files for the new computer configuration. — pbroels / githubweb
Updating iptables_patrol.bash script for Pop_OS! log file locations. — pbroels / githubweb
Moving old_carson's apache comfiguration files to subfolder incase we need to access them again. — pbroels / githubweb
Modifying apache_backup.bash to point to the new carson apache2 configuration files for backup. — pbroels / githubweb
Updating rc.netfilter to work with new carson. — pbroels / githubweb
Changing deploy script sys_admin configuration to have the correct iptables save sommand for new carson. — pbroels / githubweb
Adding comma at end of config json to allow it to work. — pbroels / githubweb
Final change to the deploy script sys_admin config fixing the post steps for all computers to allow full through run. — pbroels / githubweb
Making it so we only use commits tracked back from a single parent tree. — Gunther Huebler / githubweb
Fixing bug. — Gunther Huebler / githubweb
Automated apache config backup. — LarsonGroupSysAdmin / githubweb
Adding final status message and updating example config file. — Gunther Huebler / githubweb
Small tweaks for bug prevention — Gunther Huebler / githubweb
I clarified the usage of the deploy script. — noreply / githubweb
Changing script to check once per day for attempts at access. #756 — noreply / githubweb
Changing devtoolset to version 10 — noreply / githubweb
Updating gfortran compiler and added flag needed for a complete run. — pbroels / githubweb
Updating scripts — Gunther Huebler / githubweb
Changing git checkout command to git reset --hard, since that will wipe away changes caused by run commands if any are present. larson-group/sys_admin#763 — Gunther Huebler / githubweb
Add a few words to make it easier to find unresolved commits. — noreply / githubweb
Adding stephens_2022_paper branch to script. — noreply / githubweb
Updating NetCDF paths to match the current version on Carson. #763 — noreply / githubweb
Automated nightly tests backup. — LarsonGroupSysAdmin / githubweb
Add path for old version of gfortran, needed for E3SM. — noreply / githubweb
Automated apache config backup. — LarsonGroupSysAdmin / githubweb
Adding features to nightly test suite. larson-group/sys_admin#38 — Gunther Huebler / githubweb
Copy Brian's latest merge of CLUBB into E3SM into the e3sm_release repo — noreply / githubweb
Updating the NetCDF Fortran version. — noreply / githubweb
Automated nightly tests backup. — LarsonGroupSysAdmin / githubweb
Adding functionality to recognize empty output directories, and also ignore failed runs when updating the baseline commit. larson-group/e3sm#38 — Gunther Huebler / githubweb
Remove pycache file. — Gunther Huebler / githubweb
Adding in the login shell option to both nightly_config.sh's and nightly_tests.bash's shebang to allow the use of environment variables. — pbroels / githubweb
Automated nightly tests backup. — LarsonGroupSysAdmin / githubweb
Changes "components/cam" to "components/eam" — noreply / githubweb
Making it so that when the test exits because the baseline and final commit are the same, it does not result in an error when the unresolved list is empty. Before, it resulted in an error no matter what. — Gunther Huebler / githubweb
Automated apache config backup. — LarsonGroupSysAdmin / githubweb
Automated nightly tests backup. — LarsonGroupSysAdmin / githubweb
Automated apache config backup. — LarsonGroupSysAdmin / githubweb
Adding execute permissions to the bacula_backup.bash script. — pbroels / githubweb
Automated bacula config backup. — larsongroupgithub / githubweb
Changing the monthly script to check surplus_storage instead of Archive — noreply / githubweb
Updating to include flags for PopOS install. — noreply / githubweb
Uncommenting ZLIB step to help with the install script. — noreply / githubweb
Automated bacula config backup. — larsongroupgithub / githubweb
Updating iptables_patrol.bash to actually count the Dropping messages. — noreply / githubweb
Correcting the file we are checking for Pop OS — noreply / githubweb
Updating driver script for testing on python 3 version of checkBudget.py — cernikt / githubweb
Moving -j8 option to correct make call. Also changing mpi path from ending with _intel to ending with _ifort, since this is the correct name specified when installing mpi using the intel compiler. — Gunther Huebler / githubweb
Missed a space — Gunther Huebler / githubweb
Added backup_all_scripts_driver.bash script that has been being run on carson to the sys_admin repo #694 — cernikt / githubweb
Updating larson-group.sh script to support newer pgi version and the intel mpi version #786 — cernikt / githubweb
updated larson-grtoup paths file so oneapi mpi compiler works properly #786 — cernikt / githubweb
updated the dynamic_ip script to python 3 — cernikt / githubweb
updated the dynamic_ip script to python 3 — cernikt / githubweb
updated broken url finder script to python 3 #693 — cernikt / githubweb
updated test_bacula_restore.py script to python 3 #693 — cernikt / githubweb
changed iptables patrol script to no longer not be able to find dropping messages #787 — cernikt / githubweb
In python range(1,1) will cause the loop not to run at all, so when we only had 1 commit to check (1 commit on the previous day) the baseline would never be updated. This is just a bug, so we want to start the range at 0 and subtract 1 everywhere we see i to compensate, ensuring that the loop runs but that the elements checked remain the same. — Gunther Huebler / githubweb
Automated bacula config backup. — root / githubweb
Added python script to convert netcdf files to csv files. — cernikt / githubweb
Removing most recently added files — cernikt / githubweb
removed old users from iptables hosts file and commited some code that I didnt commit 6 months ago. — cernikt / githubweb
Copies new branch to clubb_release — noreply / githubweb
Updated dynamic_ip.py script to no longer hold onto users when the ip changes. I tested it if fairly rigorously, and it always deletes hosts when they are removed from hosts file, adds when they are added to the hosts file, and properly updates iptables rules when the host ip changes. #798 — cernikt / githubweb
I just realized how outdated the hosts file is on sys_admin, so I am adding the updated one that is currently on malan. — cernikt / githubweb
Automated bacula config backup. — root / githubweb
updating host repo update scripts to support commit logging from clubb #797 — cernikt / githubweb
There was an branch that has been updated by this script for awhile, but has not been commited to the sys_admin repo. I am commiting this change now. — LarsonGroupSysAdmin / githubweb
Making fixing change to make autoupdate message maker work properly — cernikt / githubweb
Added comments to git updates scripts effected by autocommit message maker changes — cernikt / githubweb
Added all python test suite configuration files to sys_admin to be — cernikt / githubweb
Added short bash script utility to add profile.d path updates to .bashrc — cernikt / githubweb
Updated script with minor changes — cernikt / githubweb
Updating requirements docs in order to get rid of dependabot alrets. — cernikt / githubweb
fixed bug in netcdf_install_script — root / githubweb
adding current apache configurations to sys_admin — cernikt / githubweb
Update 000-default.conf — noreply / githubweb
Update clubb webpage README.md — noreply / githubweb
Adding new install script — Gunther Huebler / githubweb
Tweaks to new script — Gunther Huebler / githubweb
Adding carson crontab to github — root / githubweb
Update to install script — Gunther Huebler / githubweb
Adding some polish to install script — Gunther Huebler / githubweb
Removing the disable cxx, we do want mpicxx to be created now. — Gunther Huebler / githubweb
Updated update scripts and raw copy updater to use the commit message — cernikt / githubweb
Changed clubb morrison update to not use squash and message args in git subtree merge — LarsonGroupSysAdmin / githubweb
Updating nightly test config to support newer configuration on carson — LarsonGroupSysAdmin / githubweb
Automated nightly tests backup. — LarsonGroupSysAdmin / githubweb
these are edited instal files for mpich and netcdf overseen and changes reccomened by gunther — picket23 / githubweb
Adds Gunther's openmp branch to clubb_release repo — noreply / githubweb
Removing files we don't need, and making changes in carson's apache config to facilitate hosting both the larson-group site and jenkins. See https://github.com/larson-group/sys_admin/issues/828\#issuecomment-2125606960 for more detail. — Gunther Huebler / githubweb
Removing temp file — Gunther Huebler / githubweb

#94 (Jul 3, 2024, 6:41:31 PM)

Changes for restart_gfortran_test — Gunther Huebler / githubweb

#88 (Jul 3, 2024, 4:34:13 PM)

Initial changes to get code working with the new spack+module system. See https://github.com/larson-group/sys_admin/issues/829 — Gunther Huebler / githubweb

#87 (Jul 3, 2024, 3:37:09 PM)

Howd this ever work with that cd?? — Gunther Huebler / githubweb

#85 (Jul 3, 2024, 2:49:06 PM)

test — Gunther Huebler / githubweb

#84 (Jul 2, 2024, 11:59:40 PM)

test — Gunther Huebler / githubweb

#83 (Jul 2, 2024, 11:58:49 PM)

test — Gunther Huebler / githubweb

#81 (Jul 2, 2024, 11:47:17 PM)

test — Gunther Huebler / githubweb

#81 (Jul 2, 2024, 11:47:17 PM)

test2 — Gunther Huebler / githubweb

#80 (Jul 2, 2024, 11:41:22 PM)

test — Gunther Huebler / githubweb

#79 (Jul 2, 2024, 6:52:41 PM)

test — Gunther Huebler / githubweb

#78 (Jul 2, 2024, 6:51:45 PM)

test — Gunther Huebler / githubweb

#77 (Jul 2, 2024, 6:49:43 PM)

test — Gunther Huebler / githubweb

#72 (Jul 2, 2024, 6:08:10 PM)

Sourcing whole profile — Gunther Huebler / githubweb

#68 (Feb 1, 2024, 3:56:15 PM)

The new tmp_calc_ngrdcol should be copied regardless of flag — Gunther Huebler / githubweb

#66 (Jan 26, 2024, 2:55:45 AM)

Small openacc changes to fix GPU runs — Gunther Huebler / githubweb

#64 (Aug 1, 2023, 3:45:37 PM)

Adding space because commit ba3b1ef5ceaa07706f078cc61cfdac22d3c6a1c3 in the sys_admin repo fixed a bug causing tests to fail, this means we have RESOLVED:d8df4eea1e41bee8cbd3de374148241f040fc03c, which was only labelled as failing since we erroneously checked the commit range it was included in. — Gunther Huebler / githubweb
Making clubb_driver only call the multicolumn driver if num_standalone_columns > 1 — 37674341+huebleruwm / githubweb
Minor adjustment to eliminate spikes in thlm tendencies from the monotonic flux limiter. (#1043) — noreply / githubweb
Making interface for matrix solvers. — 37674341+huebleruwm / githubweb
Making tridag tridiag everywhere, making sol soln, and adding intent comments. — 37674341+huebleruwm / githubweb
A different way of dealing with monotonic flux limiter spikes (#1046) — noreply / githubweb
Steffens tuner fixer branch (#1041) — noreply / githubweb
Adding capability to change matrix solving method via clubb_config_flags. — 37674341+huebleruwm / githubweb
Fixing small bug, need to pass _copy arrays to prevent lapack mangling the real ones. — 37674341+huebleruwm / githubweb
Making GPU and CPU versions of the penta_lu solver the same as discussed in larson-group/clubb#1024. — 37674341+huebleruwm / githubweb
Delete clubb.in — 37674341+huebleruwm / githubweb
Delete error_diffs.txt — 37674341+huebleruwm / githubweb
Adding capability to change matrix solving method via clubb_config_flags. — 37674341+huebleruwm / githubweb
Removing unwanted files. — 37674341+huebleruwm / githubweb
Replacing $ with & in namelist definition to make consistent. — Gunther Huebler / githubweb
Creates separate file for inputting data to the tuner — Vince Larson / githubweb
I added "smooth" max clipping for invrs_tau_shear, which is a variable — bmg2 / githubweb
ADG1_pdf_driver subroutine port with OpenACC — 37674341+huebleruwm / githubweb
Replacing old elemental ADG1_w_closure with new GPUized one. Making G_unit tests work with new version. Also making mixt_frac_max_mag a scalar since it was only being used as such. larson-group/clubb#1049 — 37674341+huebleruwm / githubweb
Making the multicolumn code open the netcdf file before writing and close when finished writing. This fixes a bug where the netcdf data wasn't being written. — Gunther Huebler / githubweb
For tuning dashboard, modify the separate input file — Vince Larson / githubweb
Delete tuner file that was accidentally committed — Vince Larson / githubweb
Prevent accidental commits of python .pyc files — Vince Larson / githubweb
I can now safely remove all the "ifdef E3SM" statements from CLUBB's — bmg2 / githubweb
For the dashboard, creates a forward model solution function. — Vince Larson / githubweb
I updated and augmented the instructions to run the tuner. — noreply / githubweb
added ntecdf var collector and readme to clubb repo — cernikt / githubweb
Adds to tuner code for min dp for stubborn parameters — Vince Larson / githubweb
Adding config script to compile with openacc using nvhpc. — Gunther Huebler / githubweb
Pushing column loop into lapack wrap. — 37674341+huebleruwm / githubweb
Restructuring and Porting of Compute_mixing_length subroutine(Phase 1) (#1052) — noreply / githubweb
Restructuring and Porting of Compute_mixing_length subroutine(Phase 2) (#1054) — noreply / githubweb
Breaking up column loop in mono_flux_limiter. This may not be the final form for GPUization, but it's definitely a start, no longer do we have to copy single column variables to multicolumn ones anywhere. (#1051) — noreply / githubweb
Adding tridiag_lu solver (#1056) — noreply / githubweb
Adds to tuner error bars on bias removal (arrow) plots — Vince Larson / githubweb
Adding OpenACC data directives for mixing length and adg routines — Vince Larson / githubweb
Fixing error causing GPU code not to run. Some variables to be copied were labelled as (ngrdcol,nz) when it should be (:ngrdcol,:nz). I've just removed the data length specifiers completely since they are not neccesary in general. — Gunther Huebler / githubweb
GPUizing sat_mixrat_ice_2D. — 37674341+huebleruwm / githubweb
Adds to dashboard plots error bars for — Vince Larson / githubweb
Adds to dashboard a bar plot that separates nonlinear — Vince Larson / githubweb
Added option (-i) to run_tuner.bash script to enable pre-tuning standalone runs. README will be updated. — Vince Larson / githubweb
Pushing column loop into calculate_thvm — 37674341+huebleruwm / githubweb
Removing update_pressure since it is no longer called anywhere in clubb or host models. The addition of this subroutine was discussed in larson-group/e3sm#6 and the removal of the call to it was discussed in larson-group/clubb#926. — 37674341+huebleruwm / githubweb
Removing update_pressure from public list. This was causing compilation crashes. RESOLVED:8c7230fecb877d04fb129ef5e143e0993b4b29b1 — Gunther Huebler / githubweb
Fixing bug, arrays given a dummy index in 0fafc6b0b1f1a6058d37bf3db4bb3708204504db are declared nsize, but are only used up to nlevels, thus we need the (1,1:nlevels) specifier when passing them. This issue was only caught by our _debug tests, so that's good evidence the new flags we added to initialize unused to memory was effective. — Gunther Huebler / githubweb
GPUizing some helping procedures. — 37674341+huebleruwm / githubweb
Removing sigma_sqd_w from the acc data copyout statement. This is a bug which was causing the code to crash when not using managed memory. — 37674341+huebleruwm / githubweb
Porting pdf_closure subroutine with OpenACC (#1059) — noreply / githubweb
made graphing for netcdf_var collector general. #1040 — cernikt / githubweb
Adding wp3_on_wp2_cfl_num to CLUBB's output stats. — bmg2 / githubweb
Added wp3_on_wp2_cfl_num to the VariableGroupNondimMoments.py file for — bmg2 / githubweb
Update VariableGroupNondimMoments.py — noreply / githubweb
Fixing bug. This was only triggered when l_input_fields=.true., which I am only testing because it needs to be true so that I can test ADG2_driver. — 37674341+huebleruwm / githubweb
Removing usage of gr from pdf_closure. It was only ever used for nz, which is now fed in directly. — 37674341+huebleruwm / githubweb
Clubb ticket #1025: Implemented way to make esa tuner reproducible, h… (#1068) — noreply / githubweb
added autocommit message maker to clubb so I have an easier time testing it — cernikt / githubweb
changes to integrate message maker into gitUpdate scripts — cernikt / githubweb
Oops, I made 1 small error, should be consistent now. — cernikt / githubweb
Implementing changes to the initial conditions. — bmg2 / githubweb
This commit most definitely does not change any bits, — bmg2 / githubweb
Add scripts to configure and run convergence test — bmg2 / githubweb
reorgnize the scripts for convergence test simulations — bmg2 / githubweb
Update README — noreply / githubweb
Gpu updates (#1070) — noreply / githubweb
Code changes to implement modified boundary condition — bmg2 / githubweb
Implements Thomas Toniazzo's bug fix for spike removal — noreply / githubweb
Fixed an old notation change in the README — noreply / githubweb
Update README — noreply / githubweb
Making 'a_const' into a CLUBB tunable parameter. (#1072) — noreply / githubweb
Update README — noreply / githubweb
Update README — noreply / githubweb
Pdf closure driver gpuization (#1071) — noreply / githubweb
Update README — noreply / githubweb
Moving compute_cloud_cover outside of if ( l_use_cloud_cover ) then statement, the cloud_cover and rcm_in_layer variables they compute aren't output in clubb_standalone, but are in cam, causing cam bit diff tests to break. — Gunther Huebler / githubweb
Undoing README update, 1 space = 1 byte and we should maximize file sizes to deter hackers from stealing our data. Also BIT_CHANGING:fb4556e4cc4cb3d4b6df3520370a28a824f357ef for configs where l_use_cloud_cover = .false., which means I was wrong about this ever not being bit changing, so I must've either only tested with l_use_cloud_cover = .true. or only tested the multicol diffs when I put compute_cloud_cover inside the if statement. — Gunther Huebler / githubweb
Adding Skthl_zm to the update host list, I missed this in the last PR. I noticed this by comparing results with and without managed memory, now I've checked BFBness with arm, mpace_b, mc3e, and gabls2. — Gunther Huebler / githubweb
Small GPU fixes (#1076) — noreply / githubweb
Adds blank line to trigger nightly tests — noreply / githubweb
Code changes to implement modificiations on wp3 clippings — bmg2 / githubweb
This commit contains code changes to implement modifications on limiters in three places: — bmg2 / githubweb
changing tunable_parameters — cernikt / githubweb
changing tunable_parameters — cernikt / githubweb
changing tunable_parameters — cernikt / githubweb
Advance xm wpxp gpuization (#1077) — noreply / githubweb
Small improvements to diff_netcdf_outputs.py, removing reliance on ncdiff, now it is entirely in python. Cleaning up linux_x86_64_nvhpc_gpu.bash, removing outdated parts, improving default parallel compilation, changing pgfortran to nvfortran. — Gunther Huebler / githubweb
Small tweaks to fix some GPU bugs. Some variables were uninitialized on the CPU while we were saving them. This could only have been caught by comparing consecutive runs and checking _zt and _zm files, even then few cases were having problems. — Gunther Huebler / githubweb
Fixing a labelling error in redirect_interpolated_azt_2D and similar procedures, since this interpolates to zt the input should be zm. I think this was my fault, so I cleaned all the zt2zm and zm2zt things up to make it a little nicer. Also ordered the routines _k _1D _2D to make it easier to jump around, it was a bit confusing as they were out of order and the typo really made it hard. — Gunther Huebler / githubweb
bug fixes for the autocommit message maker code — cernikt / githubweb
Making it so sclr_tol is set to 0 before the specified sclr_tol_in. This is so that it is initialized to 0 in the case that sclr_dim = 0, since now we are setting it to have a minimum allocation size of 1 and would otherwise have a garbage value. This is what broke the clubb_openmp_gfortran_test. — Gunther Huebler / githubweb
update the scripts for convergence test — bmg2 / githubweb
Lscale GPUization (#1079) — noreply / githubweb
gfortran does not like intent(out) specifiers for functions. — Gunther Huebler / githubweb
Added a new file to compile CLUBB on Anvil. — bmg2 / githubweb
GPUizing Various Small Routines (#1080) — noreply / githubweb
This commit is a commit that changes absolutely nothing. It is meant to trigger a change in the git update scripts, so that I can start the commit message logging in the autocommit updates larson-group/sys_admin#797 — cernikt / githubweb
Fixing an error with the autocommit_update script that was causing it new works — cernikt / githubweb
this is another commit that cahnges nothing that will trigger the gitUpdate scripts — cernikt / githubweb
Updates to make the convergence tests run on Anvil. — bmg2 / githubweb
adding an update that changes nothing and is just a test for the autoupdate script — cernikt / githubweb
Making CLUBB's splatting scheme implicit and smoother (#1075) — noreply / githubweb
Calc sfc varnce GPUization (#1081) — noreply / githubweb
Reducing C_wp2_splat to 0.25 (from 2.0) for new implicit splatting code. — benjamin.andrew.stephens / githubweb
Removed Space From clip_explicit — cernikt / githubweb
updated autocommit_message_maker to check another error for debugging — cernikt / githubweb
Fixed the autocommit message maker code, should noot error anymore — cernikt / githubweb
I am beginning a section on running the convergence tests in the README. — bmg2 / githubweb
Update run_cnvg_test_multi_cases_revall.csh — noreply / githubweb
Update run_cnvg_test_multi_cases_default.csh — noreply / githubweb
Update run_cnvg_test_multi_cases_baseline.csh — noreply / githubweb
Update README — noreply / githubweb
making changes to trigger autoudpate for test, these commits do nothing — cernikt / githubweb
Here is another commit that changes nothing — cernikt / githubweb
change to trigger updates — cernikt / githubweb
change to calc pressure to trigger autoupdate — cernikt / githubweb
Editing convergence scripts to show that the directory should be placed in — bmg2 / githubweb
Committing scripts for use in running CLUBB convergence tests in the background. — bmg2 / githubweb
Updated the background run scripts for the convergence tests with a comment — bmg2 / githubweb
I updated the README to finish the section on the convergence tests. — bmg2 / githubweb
Edited the README section on CLUBB convergence tests. — bmg2 / githubweb
I added dycoms2_rf01 to the list of cases that could be run. — bmg2 / githubweb
I updated the run_cnvg_test_multi_cases_revall.csh script to include — bmg2 / githubweb
Modified run_cnvg_test_multi_cases_default.csh and — bmg2 / githubweb
Added comments to the script to explain ambiguous portions of my code — cernikt / githubweb
GPUizing Lscale_width_vert_avg. Loops have been restructured for simplicity, and algorithm has a different starting value to avoid k dependency. Results are BFB. (#1083) — noreply / githubweb
GPUizing most of advance_clubb_core (#1084) — noreply / githubweb
advance_wp2_wp3 with explicitly managed memory (#1085) — noreply / githubweb
advance_xp2_xpyp with explicitly managed memory (#1086) — noreply / githubweb
advance_windm_edsclrm with explicitly managed memory (#1087) — noreply / githubweb
Moving data statements to outter most parts of clubb and little fix in advance_wp2_wp3 (#1088) — noreply / githubweb
Data movement improvement (#1089) — noreply / githubweb
CLUBB ticket #1069: (#1092) — noreply / githubweb
Changing "Fnc" to "fnc" for consistency and easy search. — benjamin.andrew.stephens / githubweb
Memory usage optimizations (#1091) — noreply / githubweb
Modifying README. Last commit was BIT_CHANGING:0b0ab3d530bef06eb90bf6dde21b26eb25780214 see https://github.com/larson-group/clubb/pull/1091 for details. — Gunther Huebler / githubweb
Openacc tweaks and cleanup (#1097) — noreply / githubweb
Improving run_bin_diff.py to accept an argument to print the differences, and an argument to define a threshold to ignore differences. — Gunther Huebler / githubweb
Update requirements.txt — noreply / githubweb
Update requirements.txt — cernikt / githubweb
Loop to `nz-1` instead of `nz` because upper boundary condition — noreply / githubweb
Added code to subroutine run_clubb in src/clubb_driver.F90 which prints git log and git diff information to the <case>_setup.txt output file. (#1101) — noreply / githubweb
Openacc tweaks and cleanup 2 (#1099) — noreply / githubweb
Adds to RegTune a plot of a color-coded normalized sensitivity matrix — Vince Larson / githubweb
Adds hint about installing dash for RegTune — noreply / githubweb
Updates input files for RegTune. — Vince Larson / githubweb
Bit changing changes (#1104) — noreply / githubweb
Adding wp_coef and wp_coef_zt to acc data statements. — Gunther Huebler / githubweb
For RegTune, update input netcdf files. — Vince Larson / githubweb
Bv efold bit changing (#1095) — noreply / githubweb

#59 (Nov 18, 2022, 9:47:24 AM)

A different way of dealing with monotonic flux limiter spikes in CAM, by increasing the value — benjamin.andrew.stephens / githubweb

#55 (Oct 17, 2022, 9:26:28 AM)

updated check budgets balance test to be compatible with branch test for testing python 3 version — cernikt / githubweb
updating check budgets script on main branch — cernikt / githubweb
last minute addition — cernikt / githubweb
The big grid change. Converting gr from being an array of types containing 1D arrays, to a type containing 2D arrays. All cases BFB, cam multicolumn+silhs BFB, and cam multicolumn (no silhs) with backwards compatible settings BFB. — 37674341+huebleruwm / githubweb
Adds to tuning dashboard an arrow plot of biases. — Vince Larson / githubweb
Removing the zt2zm interface from clubb_api and making the api calls just redirect to the grid class interface for it. — 37674341+huebleruwm / githubweb
Pushing column loop into mean advection procedures. — 37674341+huebleruwm / githubweb
Little loop push — 37674341+huebleruwm / githubweb
Moving above/below index of grid weights to last dimension. — 37674341+huebleruwm / githubweb
Missed file meant for commit e7ce96456e691ac84abf467670642a8ec90f4bb9. — Gunther Huebler / githubweb
Changing a few spots that use gr%weights that should have been included in commit 2f3542cea1a4dea1b242dd61947087b6458548fb — Gunther Huebler / githubweb
Hardcoding 1 into uses of gr arrays where single column versions of gr is used. — Gunther Huebler / githubweb
Pushing loop into fill_holes. — 37674341+huebleruwm / githubweb
Forgot small change. — 37674341+huebleruwm / githubweb
Making compatible with latest clubb change. — Gunther Huebler / githubweb
Making linear_interpolated_azt_2D and linear_interpolated_azm_2D subroutines just to avoid a needless data copy. — 37674341+huebleruwm / githubweb
Making update_xp2_mc 2D and creating interface for 1D calls. — 37674341+huebleruwm / githubweb
Missed file in previous commit. — Gunther Huebler / githubweb
Just a line to read me, because commit a19386022f26aa17da805381904bcde4c59cb521 fixed the bit diff tests after a previous commit broke it, RESOLVED:991ebceb8caba2ad56c1125871b7de1de3c04dba. — Gunther Huebler / githubweb
Fixing units in stats_zt_module.F90 — noreply / githubweb
Adding config file for nvhpc on casper. — Gunther Huebler / githubweb
modified clubb_ifort_configuration file to support nan trapping for uninitialized variables — cernikt / githubweb
renamed clubb_ifort_build to clubb_ifort_debug_run and updated jenkinsfile to reflect — cernikt / githubweb
forgot to change if statements in jenkinsfile — cernikt / githubweb
created debug case for gfortran as well as updating jenkins files to work with it, as well as a forgotten change to the ifort debug test jenkinsfile — cernikt / githubweb
Adds to the tuning dashboard a quadratic optimizer. — Vince Larson / githubweb
Update README — noreply / githubweb
Changed intent out to inout to fix grid deallocation error during cleanup. — Steffen Domke / githubweb
Added a3_coef_min_minmax entry to namelist init_minmax for ALL the tuner input files to prevent error with gfortran compiler (min > max) — Steffen Domke / githubweb
Added some comments. Changing some variable names might be nicer, loss might make more sense than energy, n1 and n2 are meaningless, etc. — Gunther Huebler / githubweb
Updates info on tuner. — noreply / githubweb
Fixing a bug in mono_flux_limiter.F90. (#1026) — noreply / githubweb
Fixing a bug. — bmg2 / githubweb
Update README — noreply / githubweb
Adds to tuner dashboard a plot of predicted and actual removal of regional biases. — Vince Larson / githubweb
Adding line to trigger nightly tests. — noreply / githubweb
Removing line to trigger nightly tests. — noreply / githubweb
Adding line to trigger nightly tests. — noreply / githubweb
Updates tuner with new simulations from Zhun. — Vince Larson / githubweb
I discovered a bug when trying to run with all_stats today. Apparently, — bmg2 / githubweb
I changed the w_up_in_cloud code in 2 ways: — bmg2 / githubweb
I added stats output for w_down_in_cloud to all_stats.in. — bmg2 / githubweb
I added w_down_in_cloud to the "Ws" variable group in pyplotgen. — bmg2 / githubweb
I altered the w_up_in_cloud and w_down_in_cloud code so that a — bmg2 / githubweb
I have optimized the new w_up_in_cloud and w_down_in_cloud code by — bmg2 / githubweb
Update README.md — noreply / githubweb
updating timestep_convergence_test.py to python 3 #693 — cernikt / githubweb
Refactored fill_holes_vertical to make GPUization simple. This is BIT_CHANGING, but results are bit-for-bit when using -O0 optimization, thus it is not answer changing. The first pass over each grid column will not parallelize well, the k-loop needs to be done in serial. Maximum parallelization has been exposed for the global hole-filling though, at the cost of occasionally doing unneccesary calculations. larson-group/clubb#972. — 37674341+huebleruwm / githubweb
Removing fill_holes_multiplicative and replacing magic numbers with parameters from constants_clubb. larson-group/clubb#972 — 37674341+huebleruwm / githubweb
Moving vertical_avg and vertical_integral to advance_helper_module. larson-group/clubb#972 — 37674341+huebleruwm / githubweb
Making compatible with latest clubb change. — Gunther Huebler / githubweb
Raw-copy updating src/Morrison_microphys — LarsonGroupSysAdmin / githubweb
rewrote run_bindiff_all.bash into python, and added extra functionality to view output of diff_netcdf_outputs.py script that is run inside of it. #980 — cernikt / githubweb
Removing elementalness from sat_vapor_press_liq and making interal procedures subroutines rather than functions to prevent unneccesary data copies. Doing the same for thlm2T_in_K since it is often used in conjunction with sat_vapor_press_liq. Bit-for-bit confirmed with O0 using all single column cases with or without l_diag_Lscale_from_tau, and with cam_coarse_res. larson-group/clubb#972 — 37674341+huebleruwm / githubweb
Adding comments. — 37674341+huebleruwm / githubweb
Adding initial subroutine calc_ice_cloud_frac_component. — 37674341+huebleruwm / githubweb
Cleaning up new subroutine calc_liquid_cloud_frac_component, and making sat_mixrat_ice a subroutine that works the same way as sat_mixrat_liq. larson-group/clubb#972 — 37674341+huebleruwm / githubweb
Comment update — 37674341+huebleruwm / githubweb
Removing these paratheses is BIT_CHANGING since it modifies the order of operations, but allows for the multiplication and subraction to be done in parallel for complex pipelines. — 37674341+huebleruwm / githubweb
Adding line to indicate BIT_CHANGING:055f83d512354e6330233a5eecd5cff0456c0292 to fix nightly tests. The commit which introduced calc_ice_cloud_frac_component was not BFB using -O2 optimization. See pull request https://github.com/larson-group/clubb/pull/1034 for detail. — Gunther Huebler / githubweb
Adding a kludgy but functional trimming for the (non-CLUBB) variables that are — benjamin.andrew.stephens / githubweb
In tuner, creates box and whiskers version of plot — Vince Larson / githubweb
Adds near-coastal regions to the tuner. — Vince Larson / githubweb
Making multicolumn version of advance_clubb_core in clubb_driver that accepts a number of columns to run clubb with. All bit-for-bit output on standalone cases, so the first column is correct. — 37674341+huebleruwm / githubweb
Improvements. Netcdf output is now functional and we can detect errors with multiple columns even when the standard output is identical. — 37674341+huebleruwm / githubweb
Now the multicolumn netcdf output is correct. Adding comments too. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Made the multicolumn inout arrays save from timestep to timestep. This makes the extra columns more independent from the main column and allows differences in the extra columns to propagate more. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Adding some fields to tweak for extra columns. This might be sufficient, the netcdf data for the column is similar but visually different, and I tested with up to 64 columns and there wasn't any crashes. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Adding script to compare netcdf outputs. This will print the max absolute diff and max percent diff for each field. This is made specifically for the multicolumn netcdf output. The script is not done, but this is the basics of it. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Casting 0.0 to correct precision that format_date wants. — 37674341+huebleruwm / githubweb
Updating script to compare netcdf output. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Updating column num input in config flags. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Adding small check to allow configurable_multi_column_nl to be optional. If configurable_multi_column_nl is omitted from configurable_model_flags, then we assume we only want 1 column and a warning is printed. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Small script update — 37674341+huebleruwm / githubweb
Adding comments to script. — 37674341+huebleruwm / githubweb
Adding comments, setting to num_standalone_columns=1 by default, and preventing multicolumn output when l_stats=false. larson-group/clubb#1033 — 37674341+huebleruwm / githubweb
Namelists need to be closed with a '/', and omitting it will break many tests. — Gunther Huebler / githubweb
Making save variables in the multicol code threadprivate, this fixes the openmp test. Also changing the way we name and save the multicol output, this allows the parallel run to run with multiple columns. I've reflected the changes in comments where relevant. larson-group/clubb#1033 — Gunther Huebler / githubweb
Adds commented-out line that prevents the monotonic flux — noreply / githubweb
Updating monotonic flux limiter code to remove spikes. (#1038) — noreply / githubweb
Creating new flags to control monotonic flux limiter (#1039) — noreply / githubweb
I am adding cloudy_updraft_frac and cloudy_downdraft_frac as — bmg2 / githubweb
I forgot to add cld_updr_frac and cld_downdr_frac to all_stats.in — bmg2 / githubweb

#53 (Jun 23, 2022, 2:40:31 PM)

uninitialized l_t_dependent for test — cernikt / githubweb

#50 (Jun 9, 2022, 11:01:24 AM)

fixed path error in jenkinsfile — cernikt / githubweb

#49 (Jun 9, 2022, 11:00:17 AM)

fixed comment error in jenkins file — cernikt / githubweb

#47 (Jun 9, 2022, 10:39:19 AM)

Updating Mac config to work with newer Mac processor. — pbroels / githubweb

#46 (Jun 8, 2022, 8:24:48 AM)

Lots of small loop pushes — 37674341+huebleruwm / githubweb
Small bug fix. This was not a bit changing bug, but could cause crashes if we compile with floating point trapping in a multicolumn run. — 37674341+huebleruwm / githubweb
Small refactoring to mfl_xm_lhs, just removing need to pass in gr. — 37674341+huebleruwm / githubweb
Final loop pushes needed before the grid change. — 37674341+huebleruwm / githubweb
Replacing use of gr with nz — 37674341+huebleruwm / githubweb
Chaning hardcoded 1 to i, where i is set to 1. Just a lil nicer. — 37674341+huebleruwm / githubweb

#35 (Jun 7, 2022, 10:03:17 AM)

Removing sed command as it is unnessecary. larson-group/sys_admin#763 — noreply / githubweb
This should be BIT_CHANGING, but only because the value of Cx_min should change in the netcdf file. This will not be answer changing. — Gunther Huebler / githubweb
Change value of Cx_min to match what is in parameters_tunable.F90 — noreply / githubweb
Adding flags and parameters to the r8029 backwards compatible lists. These do not change the backwards compatible results, so that we aren't relying on source code default values. — Gunther Huebler / githubweb
Changing the value of C_invrs_tau_shear from 0.02 to 0.15. — bmg2 / githubweb
Avoiding stats call for variables that are not set when l_diag_Lscale_from_tau is not true. — Gunther Huebler / githubweb
Adding line to readme because previous commit will be BIT_CHANGING:108f6ea2c8b3d9357cf551b11a85a2d9a4becc47 in the backwards compatibility run since it will prevent NaNs in the .nc files. — Gunther Huebler / githubweb
Adding script that checks if two nc files contain different output fields, rather than just checking bit-for-bitness between the two. Also making our run_bin_diff script use this new nc comparator instead of linux diff. — Gunther Huebler / githubweb
Adjusting the value of C_invrs_tau_shear from 0.15 to 0.16 so that — bmg2 / githubweb
Add l_smooth_Heaviside_tau_wpxp to smooth discontinuity in invrs_tau_wpxp_zm — noreply / githubweb
Updating pyplotgen's SAM wp3 budgets to include pressure diffusion, pressure scrambling, and the wp3_tp term. — benjamin.andrew.stephens / githubweb
Pushing column loop into advance_clubb_core, and adding interface for it so that we will not need to update any host models. Everything is bit-for-bit, testing all standalone cases and our cam_coarse res run. larson-group/clubb#972 — Gunther Huebler / githubweb
Adding an error prints subroutine to advance_microphys_module.F90 — bmg2 / githubweb
Adding l_stats check around stats stuff. This fixes the crashing when stats is disabled. larson-group/clubb#972 — Gunther Huebler / githubweb
Fixing typo in VariableGroupBase.py — noreply / githubweb
Making single and multi column versions of advance clubb core available through clubb_api. larson-group/clubb#972 — Gunther Huebler / githubweb
I added error prints to the interface for Morrison microphysics that — bmg2 / githubweb
Breaking up column loop in advance_clubb_core. larson-group/clubb#972 — Gunther Huebler / githubweb
Pushing loop into pdf_closure and breaking it up. larson-group/clubb#972 — Gunther Huebler / githubweb
I changed C_invrs_tau_N2_wp2 from 0.1 to 0.2 to help stop turbulence — bmg2 / githubweb
Clarifies debugging messages of thread test — noreply / githubweb
Pushing loop into pdf_closure_module and breaking it up. larson-group/clubb#972 — Gunther Huebler / githubweb
Making the good version of pdf_params used most places. The bad version is the single column version. larson-group/clubb#972 — Gunther Huebler / githubweb
Making a commit that officially places the call to the PDF in the "post" — bmg2 / githubweb
Pushing loops into all relevent lowest level routines in pdf_closure. larson-group/clubb#972 — Gunther Huebler / githubweb
Missing files from previous commit. larson-group/clubb#972 — Gunther Huebler / githubweb
Forgot an & symbol. — Gunther Huebler / githubweb
We need to initialize our local pdf_implicit_coefs_terms_zm in certain pdf types. We also don't need to zero out pdf_implicit_coefs_terms arrays, since that's done in the initialization. This should fix segfaults when l_call_pdf_closure_twice=.True. larson-group/clubb#972 — Gunther Huebler / githubweb
I am updating ice_supersat_frac to be an intent(inout) variable for — bmg2 / githubweb
Intializing sigma_sqd_w_zt when not using ADG1. larson-group/clubb#972 — Gunther Huebler / githubweb
Fixing bug, we were not initializng pdf_params for all columns. larson-group/clubb#972 — Gunther Huebler / githubweb
I updated CLUBB to include new fields to its restart functionality. — bmg2 / githubweb
Pushing column index into zm2zt and zt2zm. larson-group/clubb#972 — Gunther Huebler / githubweb
Pushing column index into Skx_func and making it a subroutine. larson-group/clubb#972 — Gunther Huebler / githubweb
A variety of small loop pushing. larson-group/clubb#972 — Gunther Huebler / githubweb
Missed a file to commit, causing lots of compilation failures in Jenkins tests. — Gunther Huebler / githubweb
Fixed small bug that slipped through because the G_unit tests use nz=1. — Gunther Huebler / githubweb
Pushing column index into mixing length routines, not all the way down for the non-tau based calculation. larson-group/clubb#972 — Gunther Huebler / githubweb
I added a subroutine that prints that values of all PDF parameters in — bmg2 / githubweb
Small changes and a loop push. larson-group/clubb#972 — Gunther Huebler / githubweb
Pushing loop into advance_xm_wpxp. larson-group/clubb#972 — Gunther Huebler / githubweb
Making the G_unit test use a dummy column index. This makes it so we don't need an interface for compute_sigma_sqd_w since now we only use it with 2 dimensions. This is just nicer. larson-group/clubb#972 — Gunther Huebler / githubweb
Breaking up column loop in advance_xm_wpxp_module. larson-group/clubb#972 — Gunther Huebler / githubweb
Pushing column loop into local functions. larson-group/clubb#972 — Gunther Huebler / githubweb
Adding a line to trigger the nightly tests. — noreply / githubweb
Moving stats call for uprcp and vprcp to after they are calculated. This fixes the silhs restart test. But does not seem to fix the E3SM or CAM tests that are still failing. — Gunther Huebler / githubweb
The last commit was BIT_CHANGING:fc75c887ae516e55f31156a6c1cccaedfaf34ff3 since it does change when uprcp and vprcp are saved to stats output. Was not answer changing though. — Gunther Huebler / githubweb
Add coding rule to write variables to disk immediately after they are set. — noreply / githubweb
Adding 2D version of zt2zm and zm2zt to clubb_api — Gunther Huebler / githubweb
Adds a naming convention for CLUBB's indices — noreply / githubweb
Pushing loop into solve_xm_wpxp_with_single_lhs (#986) — noreply / githubweb
Refactoring to remove need for global stats scratch variables. (#988) — noreply / githubweb
Gunthers branch (#989) — noreply / githubweb
Fixing small bug that breaks runs with scalars. — Gunther Huebler / githubweb
Implementations of smooth min, max and heaviside function. Added G-Unit tests — 68997723+JanGrn / githubweb
Fixed and added final test. Everything is now functional — 68997723+JanGrn / githubweb
Modified the two inequalities in the final test. (for mostly aesthetic reasons) — 68997723+JanGrn / githubweb
Making setup_pdf_parameters accept ngrdcols size arrays of stats and grid types. — Gunther Huebler / githubweb
Forgot two small changes. larson-group/cam#129 — Gunther Huebler / githubweb
Removing need for data copies. larson-group/cam#129 — Gunther Huebler / githubweb
Changing column loop index from j to i. larson-group/cam#129 — Gunther Huebler / githubweb
Adding a line to trigger the nightly tests. — noreply / githubweb
Removing data copies that we don't need anymore. This still runs correctly on GPUs. — 37674341+huebleruwm / githubweb
Making clip_transform_silhs_output use an array of gr. This is how it should have been once the column loop was pushed down into it, but at the time clubb was using gr through a use statement making that not possible. — 37674341+huebleruwm / githubweb
No more need for these data copies anymore now that pdf_params is allocated with ngrdcol rather than pcols. — 37674341+huebleruwm / githubweb
Adds a blank line to trigger git merge with E3SM — noreply / githubweb
Removes a blank line in order to trigger merge with E3SM — noreply / githubweb
Pushing column loop into xm_wpxp_clipping_and_stats and monotonic_turbulent_flux_limit. This essentially completes advance_xm_wpxp for now. larson-group/clubb#972 — 37674341+huebleruwm / githubweb
Replacing the i loop iterator for scalars with sclr. — 37674341+huebleruwm / githubweb
Pushing loop into advance_xp2_wpxp. — 37674341+huebleruwm / githubweb
Moving the lhs_dp1 calculation to outside of xp2_xpyp_lhs. This gives us more flexibility, since we want to pass lhs_dp1 into xp2_xpyp_implicit_stats. — 37674341+huebleruwm / githubweb
Moving the lmm_stepping and stats calls to immediately after calls to xp2_xpyp_solve. This is because xp2_xpyp_implicit_stats saves things that are saved by scratch variables, and these scratch variables are set by the lhs and rhs setup calls. So for the multiple lhs routine, we need to save the scratch variables immediately after these calls before overwriting them by calling lhs and rhs again for a different variable. Since the stats also saves the variable were solving for, we also have to move the lmm_stepping to before this call. — 37674341+huebleruwm / githubweb
Removing need for stats scratch variables by passing lhs terms to save through agument lists. This makes everything better in every way. — 37674341+huebleruwm / githubweb
Adding slicing for some lhs arrays being saved in stats. This was causing bit changing in a few lhs terms when run in multicolumn. — 37674341+huebleruwm / githubweb
Changing names of dp1 variables for up2 and vp2. Surrounding where they're set to be within a l_stats_samp. — 37674341+huebleruwm / githubweb
Removing a line at the top of the README to trigger the nightly tests. — noreply / githubweb
Adding a line to the README to trigger the nightly tests. — noreply / githubweb
I added l_relax_clipping to CLUBB's config flags. — bmg2 / githubweb
Added a3_coef_min to the list of CLUBB's tunable parameter and then — bmg2 / githubweb
Added idiot-proofing to print a warning message when l_diag_Lscale_from_tau — bmg2 / githubweb
I added the code for the l_linearize_pbl_winds flag that was originally — bmg2 / githubweb
Updates description of generating pyplotgen movies — noreply / githubweb
Set the Priority of nondimensional moments to False. — noreply / githubweb
Gunthers branch (#996) — noreply / githubweb
Various simple changes to improve performance. All bit-for-bit. — Gunther Huebler / githubweb
Pushing loop into calc_stability_correction. — Gunther Huebler / githubweb
Small bug fix. — Gunther Huebler / githubweb
Another similar small bug fix. — Gunther Huebler / githubweb
Fixed priority property not working as intended, added text indicating time span plotted in pdf files which was previously only displayed in html files. — Vince Larson / githubweb
Gunthers branch (#999) — noreply / githubweb
Renamed smth_range to heaviside_smth_range — 68997723+JanGrn / githubweb
Added tot_vartn_normlzd statistics. Renamed sclr in advance_helper_module to scalar to be more consistent with clubb naming schemes. — 68997723+JanGrn / githubweb
Implemented three further normalized variation stats. Included a (most likely temporary) check because in a few cases, denominator for normalization would be 0. — 68997723+JanGrn / githubweb
Fixed typo in pyplotgen and fixed display of plotted time (previously displayed on the wrong line). — 68997723+JanGrn / githubweb
Dealt with issue https://github.com/larson-group/clubb/issues/985 — 68997723+JanGrn / githubweb
Changed priorities of total normalized variation stats, included error handling in total normalized variation stats. — 68997723+JanGrn / githubweb
Removed duplicate VariableGroupNormalizedVariations.py — 68997723+JanGrn / githubweb
Renamed pdf_output_filename. Added grid_level constant to avoid magic numbers in stats_update_var_pt calls. — 68997723+JanGrn / githubweb
Gunthers branch 2 (#1002) — noreply / githubweb
Bugfix for merge #1000. stderr was not imported in stat_clubb_utilities.F90, causing compilation to fail. — 68997723+JanGrn / githubweb
Adding comments to explain confusing or complicated portions of the Jenkinsfiles. — pbroels / githubweb
Added ability to apply smooth min max functions in mixing_length.F90 — 68997723+JanGrn / githubweb
Updated deprecated documentation of smooth min and max functions in advance_helper_module.F90. https://github.com/larson-group/clubb/issues/965 — 68997723+JanGrn / githubweb
Checked whether results really are identical even with round-off when we have l_smooth_min_max=T and smooth_min_max_mag=zero. Next commit rolls some of these changes back for merge into master. https://github.com/larson-group/clubb/issues/965 — 68997723+JanGrn / githubweb
Added test cases to smooth_min_max_tests.F90 and updated documentation. — 68997723+JanGrn / githubweb
Added final test cases to smooth_min_max_tests.F90 — 68997723+JanGrn / githubweb
Add to tuning dashboard some plots of biases vs. sensitivity. — Vince Larson / githubweb
Update sens_matrix_dashboard.py — Vince Larson / githubweb
Add shear/neutral case (#1005) — noreply / githubweb
Changed priorities on pyplotgen variables. In a priority run, by default only the variables in VariableGroupBase.py will be plotted. This explicitly does not include variables in VariableGroupBaseBudgets, which would have to be included explicitly when desired. — Vince Larson / githubweb
Adding some description that should have been entered a very long — bmg2 / githubweb
Correcting name of old "shear" case to "neutral" in pyplotgen config file. Also adding benchmark file path. — benjamin.andrew.stephens / githubweb
Adding changes to work on new Mac Mini. larson-group/sys_admin#775 — pbroels / githubweb
Missed a place where I needed to rename shear case to neutral. — noreply / githubweb
Constructing rcm within SILHS (as rcm_pdf) (#1011) — noreply / githubweb
Almost final loop pushes (#1012) — noreply / githubweb
Making compatible with latest clubb change. — Gunther Huebler / githubweb
Making pdf_implicit_coefs_terms a type containing 2D arrays. (#1014) — noreply / githubweb
Changed clubb_bin_diff_regression_gfortran_test_new to clubb_bin_diff_regression_gfortran_test and clubb_bin_diff_regression_gfortran_test to clubb_bin_diff_regression_gfortran_test_old to reflect current usage. — pbroels / githubweb
This commit is not bit changing — noreply / githubweb
This commt is not bit changing — noreply / githubweb
The G_unit tests never allocated pdf_implicit_coefs_terms. It's unclear to me how these were working before, but it seems that something about making these 2D allocatable arrays exposed the bug. — Gunther Huebler / githubweb
Making zt2zm calls with pdf_implicit_coefs_terms use the 2D version. — Gunther Huebler / githubweb
Removing setup_grid and setup_parameters functionality from setup_clubb_core. This is beacuse in host models the required grid information may not be known during the setup process, resulting in dummy arguments for setup_clubb_core and the grid and paramters being setup during runtime anyway. Now, in the host models we can call these subroutines immediately after setup_clubb_core to maintain identical functionality (sam, wrf), and in others we can wait to call these until the main timestepping procedure (cam,e3sm). — Gunther Huebler / githubweb
Making 2D versions of setup_grid and setup_parameters. — Gunther Huebler / githubweb
Making lmin a scalar again, twas a mistake to make it an array, it can only take on one value. — Gunther Huebler / githubweb
Making nu_vert_res_dep a type containing arrays, as opposed to being an array of types. — Gunther Huebler / githubweb

#34 (Jan 12, 2022, 6:18:02 PM)

Fixing character conflict with sed string in jenkinsfile. — pbroels / githubweb

#33 (Jan 12, 2022, 6:11:29 PM)

I have passed clubb_params down into advance_xm_wpxp_module.F90. — bmg2 / githubweb
See ticket — jan.gruenenwald / githubweb
I have passed down CLUBB's tunable parameters into advance_wp2_wp3_module.F90. — bmg2 / githubweb
added some documentation in pdf_close_module.f90 and started writing of w_up_in_cloud to disk — jan.gruenenwald / githubweb
Updates to separate out C4 and C14 in advance_xp2 module. This will make it easier to control which invrs_tau_* variable multiplies each term for example. — 59519056+bstephens82 / githubweb
Changing the name of dummy_1d variables for clarity. — 59519056+bstephens82 / githubweb
I passed down CLUBB's tunable parameters into advance_xp2_xpyp_module.F90 — bmg2 / githubweb
Add a blank line to trigger nightly tests. — noreply / githubweb
Passing down more of CLUBB's tunable parameters. — bmg2 / githubweb
I accidentally removed an important comment in the previous commit. — bmg2 / githubweb
Update README.md — noreply / githubweb
Passing down more CLUBB tunable parameters. — bmg2 / githubweb
More passing down CLUBB parameters ... whoop-de-doo — bmg2 / githubweb
Passing down more tunable parameters and removing references to — bmg2 / githubweb
Removing line to trigger the nightly tests for all repos. — noreply / githubweb
See respective messages on the issue 958 on date 10/12/2021 — jan.gruenenwald / githubweb
Handling the abomination that is lmin. — bmg2 / githubweb
Commented out the k=1 boundary conditions in diffusion_zm_lhs and diffusion_zt_lhs, since these are not currently fed into the final LHS matrix. I included comments to describe why this was done. Results are b4b. — benjamin.andrew.stephens / githubweb
Adding Jenkinsfile for new clubb backwards compatibility test. larson-group#960 — Gunther Huebler / githubweb
Modifying jenkins script. larson-group/clubb#960 — Gunther Huebler / githubweb
Passing tunable parameters into the new tau code. — bmg2 / githubweb
Add a scatterplot of residual biases versus default-simulation biases. — Vince Larson / githubweb
Passed down more parameters. Results are bit-for-bit. — bmg2 / githubweb
Passing through more clubb parameters. Bit-for-bit — bmg2 / githubweb
Adding jenkins file — Gunther Huebler / githubweb
Changing name of jenkins tests. larson-group/clubb#960 — Gunther Huebler / githubweb
Renaming — Gunther Huebler / githubweb
Passing down CLUBB's tunable parameters into the setup_pdf_parameters and — bmg2 / githubweb
These updates incorporate some of Shixuan Zhang's changes, including: — benjamin.andrew.stephens / githubweb
I passed down CLUBB's tunable parameters into the advance_microphys portion of — bmg2 / githubweb
Passing down CLUBB's tunable parameters into the remainder of the — bmg2 / githubweb
I passed down the forgotten thlp2_rad_coef tunable parameter. — bmg2 / githubweb
Passing down CLUBB's tunable parameters into CLUBB's — bmg2 / githubweb
Uncommenting diffusion.F90 k=1 lines again to fix Oracle uninit var test. I've updated the accompanying note to state clearly that the lines have no effect on model output, but I guess we need to keep the lines to avoid uninitialized variables. — benjamin.andrew.stephens / githubweb
I am passing down the forgotten parameter, altitude threshold, in — bmg2 / githubweb
Adding code wrapped in a flag (l_use_tke_in_K_dfsn) to use u_i'u_i' in the wp2 and wp3 eddy diffusion terms, instead of just wp2 or wp3. Relevant to CLUBB issue #920. — 59519056+bstephens82 / githubweb
Updates as requested to the l_use_tke_in_K_dfsn code: — 59519056+bstephens82 / githubweb
Added WSUP from SAM to the VariableGroupWs.py in pyplotgen — jan.gruenenwald / githubweb
I am committing the final stage of the "pass-down params" project. — bmg2 / githubweb
Adding an option to use invrs_tau_N2_iso for C4 terms. The same invrs_tau had been used for C4 and C14 terms, so some adjustments had to be made to separate them out (this was started with an earlier commit: https://github.com/larson-group/clubb/commit/ef3be1b1378bcd1a447f3866c9f88f8cc4764233). The flag is currently set to false so results will be b4b. — 59519056+bstephens82 / githubweb
Renaming invrs_tau_zt and invrs_tauw3t to "invrs_tau_wp3_zt" in advance_wp2_wp3 to avoid confusion. This variable is only used for the wp3 C8 term, so one consistent name is simpler, and the name "invrs_tau_zt" is already used by another variable in advance_clubb_core. — 59519056+bstephens82 / githubweb
Adding comments for clarity. — 59519056+bstephens82 / githubweb
I forgot to add this necessary subroutine call to the clubb API. — bmg2 / githubweb
Fixing a minor accounting bug related to the changes in https://github.com/larson-group/clubb/commit/987d63de489d2baa09ad6e1538b2c6dbb7551690. There was some overcounting of the relevant terms. — benjamin.andrew.stephens / githubweb
I have turned the nu_vert_res_dep family of variables into a derived — bmg2 / githubweb
Add 3 new features to dashboard: — Vince Larson / githubweb
Updating tolerance_check.py to Python3. — pbroels / githubweb
Added sam file name to DYCOMS_RF02_DO case, fixed the clipping in calc_w_up_in_cloud in pdf_closure_module.f90, and changed long name of w_up_in_cloud in stats_zt_module.f90 — jan.gruenenwald / githubweb
Turn off l_Lscale_vert_avg because this flag has been deprecated. — noreply / githubweb
Resolved any issues in the pull request. See https://github.com/larson-group/clubb/pull/970 for details — jan.gruenenwald / githubweb
Included a check in pdf_closure_module.f90 to check if flag for iw_up_in_cloud is set. Removed iw_up_in_cloud from standard_stats.in to prevent binary diffs in CLUBB output files after merge — jan.gruenenwald / githubweb
fixed a typo in pdf_closure_module.f90, line 1284 — jan.gruenenwald / githubweb
See ticket — 68997723+JanGrn / githubweb
added some documentation in pdf_close_module.f90 and started writing of w_up_in_cloud to disk — 68997723+JanGrn / githubweb
See respective messages on the issue 958 on date 10/12/2021 — 68997723+JanGrn / githubweb
Added WSUP from SAM to the VariableGroupWs.py in pyplotgen — 68997723+JanGrn / githubweb
Added sam file name to DYCOMS_RF02_DO case, fixed the clipping in calc_w_up_in_cloud in pdf_closure_module.f90, and changed long name of w_up_in_cloud in stats_zt_module.f90 — 68997723+JanGrn / githubweb
Resolved any issues in the pull request. See https://github.com/larson-group/clubb/pull/970 for details — 68997723+JanGrn / githubweb
Included a check in pdf_closure_module.f90 to check if flag for iw_up_in_cloud is set. Removed iw_up_in_cloud from standard_stats.in to prevent binary diffs in CLUBB output files after merge — 68997723+JanGrn / githubweb
fixed a typo in pdf_closure_module.f90, line 1284 — 68997723+JanGrn / githubweb
Passing w_up_in_cloud out of advance_clubb_core — bmg2 / githubweb
fixed compiler warning regarding w_up_in_cloud — jan.gruenenwald / githubweb
Remove clipping from a3_coef. — noreply / githubweb
Add "subcolumns" key to LASSO cases in pyplotgen. — noreply / githubweb
Adding a line to the readme to trigger the nightly tests. — noreply / githubweb
Removing a line to trigger the nightly tests. larson-group/sys_admin#763 — noreply / githubweb
These changes allow you to call the 4 clubb "advance" subroutines in any — Brian Griffin / githubweb
Placing the order variables in a nice, convenient place for testing use. — Brian Griffin / githubweb
I reordered advance_clubb_core so that the "Advance xp3" (which is a — Brian Griffin / githubweb
I am committing the idiot-proofing code that forces l_min_xp2_from_corr_wx — Brian Griffin / githubweb
I am indenting the portion of the code where the advance subroutines — Brian Griffin / githubweb
Temporarily commenting out the idiot proofing in order to run some tests ... — Brian Griffin / githubweb
Now official reinstating the idiot-proofing and turning off the — bmg2 / githubweb
I am committing some idiot proofing in regards to the advance — bmg2 / githubweb
Updates to SAM-style budget plots for CLUBB output. — benjamin.andrew.stephens / githubweb
Adding new four-case tuner script and also some minor updates to error.F90 that avoid the "LES is zero" error for the cloud water and cloud fraction. — 59519056+bstephens82 / githubweb
Adding comments and minor cleanup for my last commit about the tuner update. — 59519056+bstephens82 / githubweb
Updating error.F90 to include the error statement about LES field being zero as a check. — 59519056+bstephens82 / githubweb
Updating CLUBB to pass uprcp and vprcp into and out of advance_clubb_core. — bmg2 / githubweb
Now that uprcp and vprcp have been passed through advance_clubb_core, — bmg2 / githubweb
I am adding more arguments to the argument list for advance_clubb_core — bmg2 / githubweb
Modifying the generate subcolumn panels function to smoothly plot both CLUBB and WRF-LASSO SILHS subcolumns. — benjamin.andrew.stephens / githubweb
Insert print about overwriting default flags with namelist values — noreply / githubweb
Insert print about overwriting default parameters with namelist values — noreply / githubweb
Note that source-code flags and parameter values are overwritten by namelist values — noreply / githubweb
Clarify comments in README — noreply / githubweb
Making api version of setup_grid. larson-group/clubb#972 — Gunther Huebler / githubweb
Making some paramters_silhs variables available from the silhs api — Gunther Huebler / githubweb
Comment out setting of fatal error — noreply / githubweb
Adding a step to remove idio proofing into backwards compatibility test. larson-group/sys_admin#763 — pbroels / githubweb

#23 (Sep 29, 2021, 5:10:42 PM)

Eliminating l_update_pressure flag. — rhodesk / githubweb
Fixing compilation error caused by flag removal — rhodesk / githubweb
Eliminating l_upwind_wpxp_ta flag. — rhodesk / githubweb
Updates to tuner to print the improvement in the individual variables at the end of the tuner run, in addition to the total improvement. — 59519056+bstephens82 / githubweb
Changing the denominator in the variable-by-variable expression so that the individual terms add up to the total percent improvement. — 59519056+bstephens82 / githubweb
Updating the surface clipping coefficient... — noreply / githubweb
Adding blank line to note that my previous commit was BIT_CHANGING. — noreply / githubweb
Change normalization of sensitivity matrix. — Vince Larson / githubweb
Adding in l_vary_convect_depth as requested. — 72510114+RhodesKeegan / githubweb
Removing blank line... — noreply / githubweb
Removing a couple of unused parameters from use statement. — noreply / githubweb
Pushing k loop down through clip_variance_level. — rhodesk / githubweb
Udpates to make it possible for us to keep certain parameters equal to each other during tuning. — 59519056+bstephens82 / githubweb
Updates to improve error checking for the tuner, updates to comments. — 59519056+bstephens82 / githubweb
Getting rid of a duplication of code. — 59519056+bstephens82 / githubweb
Updating name of l_vary_params_together flag to l_keep_params_equal, since this is probably more clear and also is more consistent with my comments in the code. — 59519056+bstephens82 / githubweb
Further tuner updates. These updates introduce the option to give a minimum value for tuned parameters. Error checks are included. — 59519056+bstephens82 / githubweb
Removing an old comment — 59519056+bstephens82 / githubweb
Updating some comments related to the tuner updates. — 59519056+bstephens82 / githubweb
Update README — 59519056+bstephens82 / githubweb
Minor updates requested in pull request: renaming a variable and adding some comments. — 59519056+bstephens82 / githubweb
Adding space to trigger autoupdate. larson-group/sys_admin#755 — Gunther Huebler / githubweb
Remove space to trigger autoupdate. larson-group/sys_admin#755 — noreply / githubweb
Add space to trigger nightly tests. For larson-group/sys_admin#755. — noreply / githubweb
Adding in helper scripts to replace variables as in ticket #886 and ticket #733. — rhodesk / githubweb
Add a blurb on plotting CAM output to the pyplotgen README. — noreply / githubweb
Updates to pyplotgen to include LASSO cases. Currently the WRF benchmark file path is not going to be generally valid. We will probably want to add the WRF-LASSO benchmark files to the benchmark repo, but they will need some additional processing to get rid of large 3D variables that we don't need, or possibly add some additional variables that we want. — 59519056+bstephens82 / githubweb
Some updates to the paths for the WRF-LASSO benchmark files, and some minor updates so that a few more variables will show up from both the WRF-CLUBB runs and the WRF-LASSO benchmark runs. — 59519056+bstephens82 / githubweb
Adding wpuiui to VariableGroupWs.py — 59519056+bstephens82 / githubweb
I am fixing a bug that was introduced in 6b0348e, where the logical — bmg2 / githubweb

#15 (Aug 16, 2021, 9:36:31 AM)

Eliminating l_single_C2_Skw flag. — 72510114+RhodesKeegan / githubweb
Update to run_tuner.bash to save the contents of the error_*.in file to the tuner log at the end of the run. — 59519056+bstephens82 / githubweb
Eliminating l_include_ice and sat_ice_ratio. — rhodesk / githubweb
Update argument list of analyzeSensMatrix in the unit tests — Vince Larson / githubweb

#11 (Aug 13, 2021, 10:47:08 AM)

Removing exit command left by mistake — noreply / githubweb

#8 (Aug 13, 2021, 8:32:10 AM)

Eliminating l_apply_rule_to_pdf_params flag. — rhodesk / githubweb
Removing incorrect name from COAMPS variable list — noreply / githubweb
Eliminating l_ub_const_deriv flag. — rhodesk / githubweb
Eliminating l_equation_21 flag. — rhodesk / githubweb
Adding additional ifort environment script to test to fix compile errors. larson-group/sys_admin#750 — pbroels / githubweb
Adding ifort environment script to the compile step for all ifort scripts. — pbroels / githubweb
Eliminating l_wp3_2nd_buoyancy flag. — rhodesk / githubweb
Updates to pyplotgen that will include all invrs_tau_* lines in a single plot, and also updates to prevent SAM and COAMPS lines from being plotted when those models will never have the variables being plotted. — 59519056+bstephens82 / githubweb
Updates to include all invrs_tau_* variables in the output stats files, and pyplotgen updates to plot all of the invrs_tau_* variables on two separate plots along with the other "base" variables. — 59519056+bstephens82 / githubweb
Eliminating l_refine_grid_in_cloud and l_interactive_refined. — rhodesk / githubweb
Updating the tuner README to clarify how the user should set the initmax values. — benjamin.andrew.stephens / githubweb
Eliminating l_use_experimental_term_pr2 and l_use_vert_avg_winds — rhodesk / githubweb
Updating run_tuner.bash so that it will run the tuner test cases with the initial tunable_parameters.in (i.e. before tuning) to make it easier to compare the optimized runs with the initial runs. The initial runs are saved in a separate directory. — 59519056+bstephens82 / githubweb
Removing superfluous bash script commands. — 59519056+bstephens82 / githubweb
Eliminating l_use_wp3_pr3 flag. — rhodesk / githubweb
Eliminating l_clip_semi_implicit flag. — rhodesk / githubweb
Adding intent labels for subroutines throughout clubb. — rhodesk / githubweb
Replacing all mentions of /usr/local/les_and_clubb_benchmark_runs with the new/home/pub location. larson-goup/sys_admin#750 — pbroels / githubweb
Updates to tuner script to prevent it from moving output files that have not been tuned. — 59519056+bstephens82 / githubweb
BIT_CHANGING:af17ebf83826423f24165dab46ce098bf39444dd — noreply / githubweb

#5 (Aug 11, 2021, 12:05:29 PM)

Fixing syntax error preventing jenkins tests from running. larson-group/sys_admin#727 — pbroels / githubweb
Add error header for CLUBB in CAM — noreply / githubweb
Adding some preprocessor directives — noreply / githubweb
Fixing the ordering of gr in the arg list and dropping usage of grid_class. — rhodesk / githubweb
Fixing the ordering of gr in the clubb_api arg list for affected subroutines. — rhodesk / githubweb
Add blank line to trigger nightly tests. — noreply / githubweb
Fixing coding standard violations — rhodesk / githubweb
Removing a few lines from wangara_sounding.in to be consistent with SAM "snd" and "lsf" files. — benjamin.andrew.stephens / githubweb
Removing blank line to note that yesterday's changes to the Wangara sounding file was BIT_CHANGING. — noreply / githubweb
Adding new SAM-LES WANGARA benchmark file to Pyplotgen. — benjamin.andrew.stephens / githubweb
Add to dashboard outputs related to observations. — Vince Larson / githubweb
Improving error messages in setup_clubb_core. larson-group/e3sm#38 — Gunther Huebler / githubweb
Changing if conditional statements to the name of the tests to ensure all features work as intended. larson-group/sys_admin#735 — pbroels / githubweb
Fixing error in clubb_error_handling_gfortran_test Jenkinsfile from previous commit to allow for the test to run. — pbroels / githubweb
Changing Pillow version number in requirements.txt to solve issue brought up by dependabot. larson-group/sys_admin#741 — pbroels / githubweb
Feeding stats variables through the argument lists of needed subroutines. — 72510114+RhodesKeegan / githubweb
Fixing spacing issues along with placing the stats varibales on their own lines. — 72510114+RhodesKeegan / githubweb
Changing more subroutines to include stats vars in their arg lists. — 72510114+RhodesKeegan / githubweb
Fixing incorrect subroutine arg list — 72510114+RhodesKeegan / githubweb
Fixing host models not compiling. — 72510114+RhodesKeegan / githubweb
Fixing argument list so that way the coding standard is upheld. — 72510114+RhodesKeegan / githubweb
Add new plots and calculations to dashboard. — Vince Larson / githubweb
I changed the name to calc_responder_driver because I thought that — bmg2 / githubweb
Code changes to introduce wp2_pr_dfsn, the wp2 pressure diffusion term, consistent with Lumley 1978. Related to #920. — 59519056+bstephens82 / githubweb
Fixing comment for the wp2_term_pr_dfsn subroutine. Related to #920. — 59519056+bstephens82 / githubweb
Updating wp3 pressure diffusion term to be consistent with the Lumley 1978 formula for the perturbation pressure. For #920. — 59519056+bstephens82 / githubweb
Making requested changes to the wp2 pressure diffuion additions, including correcting some grid-level related issues. Related to #920. — 59519056+bstephens82 / githubweb
Fixing some comments. — 59519056+bstephens82 / githubweb
Correcting a typo bug and adding some descriptive comments to two new variables. This is a BIT_CHANGING commit becuase it will affect the newly calculated variables and descriptions in the output files, but it won't affect any plotted results. Related to #920. — benjamin.andrew.stephens / githubweb
Moving the stats variables to module variables of clubb_driver. — 72510114+RhodesKeegan / githubweb
Fixing missing comment — 72510114+RhodesKeegan / githubweb
Adding new Jenkinsfile for new bit diff test for clubb. larson-group/e3sm#38 — Gunther Huebler / githubweb
Making Jenkinsfile not a directory... larson-group/e3sm#38 — Gunther Huebler / githubweb
Changing job name in jenkins file. larson-group/e3sm#38 — Gunther Huebler / githubweb
Reverting accidental change to Jenkinsfile. larson-group/e3sm#38 — Gunther Huebler / githubweb
Updating new Jenkinsfile. larson-group/e3sm#38 — Gunther Huebler / githubweb
Updating Jenkinsfile because sys_admin files changed names. — Gunther Huebler / githubweb
Modifying run_full_api_diagnostics.bash, create_module_table.py, and usage_analyzer.py to create and save tables similar to the nightly tests. larson-group/sys_admin#749 — pbroels / githubweb
Modigying jenkins test to display tables after test run. larson-group/sys_admin#749 — pbroels / githubweb
Fixing coding standard viloation of lines exceeding 100 characters. — rhodesk / githubweb
Adding wp3_pr_tp (aka "negative nose" term) to wp3 equation. Related to #920. — 59519056+bstephens82 / githubweb
Changing the way the new wp3_pr_tp term works, by generalizing the wp3_terp_pr_lhs subroutine. Also cleaning up comments and changing the description of the wp3_pr_tp variable in the netcdf output files, hence this commit is BIT_CHANGING, although it will not affect numerical results since the wp3_pr_tp coefficient (C_wp3_pr_tp) is set to zero. — 59519056+bstephens82 / githubweb
Adding the new pressure-related terms, wp2_pr_dfsn and wp3_pr_tp, to the --sam-style-budgets option in Pyplotgen. — benjamin.andrew.stephens / githubweb
Removing l_interp_prescribed_params from setup_clubb_pdf_params. — rhodesk / githubweb
Modifying run_timestep_tests.bash to run only 10 minute and above timesteps and exit immediately if the 10 mintue timestep fails. larson-group/sys_admin#749 — pbroels / githubweb
Adding new timestep test to clubb jenkins tests. larson-group/sys_admin#749 — pbroels / githubweb
Fixing false printing of "All cases ran to completion." — noreply / githubweb
Updating clubb_tuner.F90 to resolve an issue where the optimized tunable_parameter_*.in file was not being created by default. Now it will always be created when the tuner is run, as it should be. — 59519056+bstephens82 / githubweb
Updating wording — 59519056+bstephens82 / githubweb
Adding in the Mstandard flag to the pgi compiler settings. — rhodesk / githubweb
Updating pyplotgen.py and README to clarify file name mismatch error and how to resolve it. — 59519056+bstephens82 / githubweb
Fixing typo. — 59519056+bstephens82 / githubweb
Clarifying README. — 59519056+bstephens82 / githubweb
Placing line breaks in the new error message and minor wording updates. — 59519056+bstephens82 / githubweb
Adding comments labeling subroutine calls with intent. — rhodesk / githubweb
Removing dependency on /home/pub and moving it to /home/jenkins larson-group/sys_admin#735 — pbroels / githubweb
Adding some new, but still simple, parsing capabilities to input_netcdf.F90 so that the tuner will not crash if netcdf dates are in a slightly different format. Now, instead of assuming the format of the string, the code will search for the positions of the two hyphens and the two colons and get the date and time based on that. — 59519056+bstephens82 / githubweb
Adding some spaces to make the code a little nicer. — 59519056+bstephens82 / githubweb
Adding comments and renaming variables per Vince's comments. Some minor cleaning. — 59519056+bstephens82 / githubweb
Adding intent labels for subroutines throughout clubb. — rhodesk / githubweb
Removing unnecessary constant from use statement — noreply / githubweb
Updates to help run multiple tuner cases. The date/time assertion check in error.F90 was not working correctly for multiple cases, since instead of updating the CLUBB date/time based on the case, it was just using one CLUBB case for all LES cases and crashing. — 59519056+bstephens82 / githubweb
Fix typo — noreply / githubweb
Include comment about current tuner compiler issue — noreply / githubweb
Attempt to add error bars to the metrics predictions — Vince Larson / githubweb
Eliminating l_nu_grid_dependent as requested. — rhodesk / githubweb
Eliminating l_use_buoy_mod_Km_zm. — rhodesk / githubweb
Eliminating l_iter_xp2_xpyp flag. — rhodesk / githubweb
Changing ifort environment variable file to new ifort file. larson-group/sys_admin#750 — pbroels / githubweb