Console Output

Started by an SCM change
Obtained jenkins_tests/clubb_release_diff_test/Jenkinsfile from git https://github.com/larson-group/clubb.git
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/clubb_release_diff_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_release_diff_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021
 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 6074d7b38f6bd68b4344ab19c9e3ddf8de415e95 # timeout=10
Commit message: "Change normalization of sensitivity matrix. Before it was normalized by (default-observed) values of metrics. Now it is normalized by 1/obs.  This leaves the sensitivity matrix free from dependence on the bias and puts the bias entirely on the right-hand side of the matrix equation. Also, the parameter values are no longer normalized by max(def,sens) values.  Instead, they are normalized by the values used in the default simulation, and a sensitivity simulation value is used only if the default-simulation value is zero."
 > git rev-list --no-walk e8cfbf132e77e340988e90938742ec1912a371d1 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Clubb and Clubb_Release)
[Pipeline] sh
+ git clone https://github.com/larson-group/clubb.git
Cloning into 'clubb'...
+ git clone https://github.com/larson-group/clubb_release.git
Cloning into 'clubb_release'...
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Diff)
[Pipeline] sh
+ diff --exclude=.git --exclude=version_clubb_core.txt --exclude=version_silhs.txt -r clubb clubb_release
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS