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Started by an SCM change Obtained jenkins_tests/sam_clubb_pgi_build/Jenkinsfile from git https://github.com/larson-group/sam_clubb.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task ‘Mac’ is reserved for jobs with matching label expression Running on Jenkins in /home/jenkins/workspace/sam_clubb_pgi_build [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git > git rev-parse --resolve-git-dir /home/jenkins/workspace/sam_clubb_pgi_build/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/larson-group/sam_clubb.git # timeout=10 Fetching upstream changes from https://github.com/larson-group/sam_clubb.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/sam_clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 2985dbcfb4f65582713dfa8e052c8038bc2628df (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 2985dbcfb4f65582713dfa8e052c8038bc2628df # timeout=10 Commit message: "Autoupdated CLUBB files from Clubb's src/CLUBB_core" > git rev-list --no-walk 918794bf78a7a57f947a50ca2bf2749d83f168cd # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Edit Makefile) [Pipeline] sh + sed -i 's/FFLAGS += -I.*/FFLAGS += -I${INC_MPI} -I${INC_NETCDF} -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART/g' Makefile [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Edit Default Case) [Pipeline] sh + sed -i 's/nstop.*/nstop = 6,/g' DYCOMS_RF02/prm [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile) [Pipeline] sh + ./Build if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_2D ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_2D if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_3D ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_3D if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOMENTS ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOMENTS if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_STAT ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_STAT if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOVIES ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOVIES if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/RESTART ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/RESTART if ! ( -d /home/jenkins/workspace/sam_clubb_pgi_build/OBJ ) mkdir /home/jenkins/workspace/sam_clubb_pgi_build/OBJ if ! ( -d OUT_2D ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_2D OUT_2D if ! ( -d OUT_3D ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_3D OUT_3D if ! ( -d OUT_MOMENTS ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOMENTS OUT_MOMENTS if ! ( -d OUT_STAT ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_STAT OUT_STAT if ! ( -d OUT_MOVIES ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OUT_MOVIES OUT_MOVIES if ! ( -d RESTART ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/RESTART RESTART if ! ( -d OBJ ) ln -s /home/jenkins/workspace/sam_clubb_pgi_build/OBJ OBJ cat if ( -e /home/jenkins/workspace/sam_clubb_pgi_build/OBJ/MICRO_RAD_OPTIONS ) then cmp -s /home/jenkins/workspace/sam_clubb_pgi_build/OBJ/MICRO_RAD_OPTIONS MICRO_RAD_OPTIONS.new if ( 0 != 0 ) then endif mv -f MICRO_RAD_OPTIONS.new /home/jenkins/workspace/sam_clubb_pgi_build/OBJ/MICRO_RAD_OPTIONS cd /home/jenkins/workspace/sam_clubb_pgi_build/OBJ if ( ! ( -e Filepath ) ) then gmake -j4 -f /home/jenkins/workspace/sam_clubb_pgi_build/Makefile /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/CLUBB/clubb_api_module.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/params.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_silhs_vars.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubbvars.F90; NVFORTRAN-W-0006-Input file empty (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_silhs_vars.F90) NVFORTRAN/x86-64 Linux 21.3-0: compilation completed with warnings NVFORTRAN-W-0435-Array declared with zero size (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubbvars.F90: 93) NVFORTRAN-W-0435-Array declared with zero size (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubbvars.F90: 96) NVFORTRAN-W-0435-Array declared with zero size (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubbvars.F90: 104) 0 inform, 3 warnings, 0 severes, 0 fatal for clubbvars /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/calc_vars_util.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/hbuffer.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/compute_chi_module.F90; NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 300) 0 inform, 1 warnings, 0 severes, 0 fatal for module_mp_graupel NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 5894) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 5905) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 5928) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 5976) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 5980) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6066) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6073) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6079) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6204) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6210) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6248) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6253) NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/module_mp_graupel.F90: 6257) /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/advect_mom.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/ADV_MPDATA/advect_scalar.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/ADV_MPDATA/advect_scalar2D.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/ADV_MPDATA/advect_scalar3D.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/buoyancy.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/simple_ocean.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/hbuf_conditionals_init.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/landflx.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/stat_moments.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/movies.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/readiopdata_module.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/oceflx.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/precip_fall.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/press_grad.F90; NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/press_grad.F90: 10) /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/press_rhs.f90; 0 inform, 1 warnings, 0 severes, 0 fatal for press_grad NVFORTRAN-W-0173-PGI Fortran extension: nonstandard use of data type length specifier (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/press_rhs.f90: 12) /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/pressure_big.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/pressure_orig.f90; 0 inform, 1 warnings, 0 severes, 0 fatal for press_rhs /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/pressz.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/printout.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/rad_simple.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/rad_simple_smoke.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/rad_simple_uwm.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/setforcing.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/setgrid.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/stat_sw1.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/RAD_CAM/traceini.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/uvw.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/write_fields2D.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/MICRO_M2005_UWM/microphysics.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/stat_clubb.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/damping.F90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/forcing.F90; NVFORTRAN-S-0186-Argument missing for formal argument c1b (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 630) NVFORTRAN-S-0186-Argument missing for formal argument err_code_api (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 697) 0 inform, 0 warnings, 2 severes, 0 fatal for clubb_sgs_setup NVFORTRAN-S-0186-Argument missing for formal argument thlp2_forcing (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 1674) NVFORTRAN-S-0186-Argument missing for formal argument cloud_cover (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 1680) NVFORTRAN-S-0186-Argument missing for formal argument l_standard_term_ta (/home/jenkins/workspace/sam_clubb_pgi_build/SRC/SGS_CLUBB/clubb_sgs.F90: 1841) 0 inform, 0 warnings, 3 severes, 0 fatal for advance_clubb_sgs /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/hbuf_micro_init.f90; /opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//bin/mpif90 -c -Mfreeform -g -C -O1 -Kieee -Mcache_align -Ktrap=fp -Mstandard -traceback -I/opt/nvidia/hpc_sdk/Linux_x86_64/21.3/comm_libs/openmpi/openmpi-3.1.5//include -I/usr/local/NETCDF-Fortran-4.4.5-pgi/include -DCLUBB -DCLUBB_REAL_TYPE=8 -DNETCDF -DUWM_STATS -DUWM_MISC -DUWM_MICRO_CHANGES -DMICRO_RESTART /home/jenkins/workspace/sam_clubb_pgi_build/SRC/ice_fall.f90; gmake: *** [/home/jenkins/workspace/sam_clubb_pgi_build/Makefile:699: clubb_sgs.o] Error 2 gmake: *** Waiting for unfinished jobs.... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run SAM) Stage "Run SAM" skipped due to earlier failure(s) [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] sh + cp runsam.log /home/jenkins/test_logs/sam_clubb_pgi_build/ cp: cannot stat ‘runsam.log’: No such file or directory [Pipeline] } [Pipeline] // script Error when executing always post condition: hudson.AbortException: script returned exit code 1 at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.handleExit(DurableTaskStep.java:659) at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.check(DurableTaskStep.java:605) at org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.run(DurableTaskStep.java:549) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180) at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748) [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 2 Finished: FAILURE