Step | Arguments | Status | ||
---|---|---|---|---|
Start of Pipeline - (47 min in block) | ||||
node - (47 min in block) | ||||
node block - (26 min in block) | ||||
stage - (6.2 sec in block) | Declarative: Checkout SCM | |||
stage block (Declarative: Checkout SCM) - (6 sec in block) | ||||
checkout - (5.8 sec in self) | ||||
withEnv - (25 min in block) | GIT_BRANCH, GIT_COMMIT, GIT_PREVIOUS_COMMIT, GIT_PREVIOUS_SUCCESSFUL_COMMIT, GIT_URL | |||
withEnv block - (25 min in block) | ||||
withEnv - (25 min in block) | commit, branch | |||
withEnv block - (25 min in block) | ||||
stage - (1 min 21 sec in block) | Checkout Externals and Copy Custom Files | |||
stage block (Checkout Externals and Copy Custom Files) - (1 min 21 sec in block) | ||||
sh - (1 min 21 sec in self) | python run_scripts/set_up_cam_coarse_res.py . | |||
stage - (1 sec in block) | Sed Commands | |||
stage block (Sed Commands) - (0.82 sec in block) | ||||
sh - (0.36 sec in self) | sed -i 's/COMPILER=.*/COMPILER="intel"/g' run_scripts/run_scam.bash | |||
sh - (0.34 sec in self) | sed -i 's/DEBUG="TRUE"/DEBUG="FALSE"/g' run_scripts/run_scam.bash | |||
stage - (0.93 sec in block) | Remove Old Output | |||
stage block (Remove Old Output) - (0.71 sec in block) | ||||
sh - (0.35 sec in self) | rm -rf /home/jenkins/cam_output/scratch/test_scam_atex /home/jenkins/cam_output/scratch/test_scam_arm97 | |||
script - (0.21 sec in block) | ||||
script block - (82 ms in block) | ||||
stage - (10 min in block) | Run atex | |||
stage block (Run atex) - (10 min in block) | ||||
sh - (10 min in self) | source /etc/profile.d/larson-group.sh run_scripts/run_scam.bash atex | |||
stage - (12 min in block) | Run arm97 with SILHS | |||
stage block (Run arm97 with SILHS) - (12 min in block) | ||||
sh - (12 min in self) | source /etc/profile.d/larson-group.sh # ulimit line is here so that we can override the default stack limit so that the program can write larger files properly ulimit -s 8388608 run_scripts/run_scam.bash -s arm97 | |||
stage - (1 min 45 sec in block) | Compile and Run CLUBB | |||
stage block (Compile and Run CLUBB) - (1 min 45 sec in block) | ||||
sh - (1 min 45 sec in self) | source /etc/profile.d/larson-group.sh module load intel netcdf-fortran rm -rf clubb; git clone https://github.com/larson-group/clubb clubb/compile/compile.bash -c config/linux_x86_64_ifort.bash clubb/run_scripts/run_scm.bash atex mv clubb/output CLUBB | |||
stage - (16 sec in block) | Plot | |||
stage block (Plot) - (15 sec in block) | ||||
sh - (0.4 sec in self) | mkdir CAM_CLUBB | |||
sh - (0.33 sec in self) | mv /home/jenkins/cam_output/scratch/test_scam_atex/run/*.cam.h0i.* CAM_CLUBB/atex_cam.nc | |||
sh - (13 sec in self) | clubb/postprocessing/pyplotgen/pyplotgen.py -r -l --cam CAM_CLUBB --clubb CLUBB -o ${commit} | |||
sh - (0.62 sec in self) | ssh carson 'mkdir -p /home/pub/cam_clubb_plots/clubb_silhs_devel' | |||
sh - (0.6 sec in self) | scp -r 8bc0147 carson:/home/pub/cam_clubb_plots/clubb_silhs_devel | |||
sh - (0.57 sec in self) | ssh carson '/home/pub/generate_plot_directory_page.py /home/pub/cam_clubb_plots/' | |||
stage - (4.7 sec in block) | Declarative: Post Actions | |||
stage block (Declarative: Post Actions) - (4.6 sec in block) | ||||
script - (4.4 sec in block) | ||||
script block - (4.3 sec in block) | ||||
cleanWs - (0.12 sec in self) | ||||
sh - (0.87 sec in self) | chmod -R 755 /home/jenkins/cam_output/ | |||
sh - (0.52 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_atex/bld/atm.bldlog.*.gz cat /home/jenkins/cam_output/scratch/test_scam_atex/bld/atm.bldlog.* | |||
sh - (0.34 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_atex/bld/cesm.bldlog.*.gz cat /home/jenkins/cam_output/scratch/test_scam_atex/bld/cesm.bldlog.* | |||
sh - (0.37 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_atex/run/atm.log.*.gz cat /home/jenkins/cam_output/scratch/test_scam_atex/run/atm.log.* | |||
sh - (0.33 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_atex/run/cesm.log.*.gz cat /home/jenkins/cam_output/scratch/test_scam_atex/run/cesm.log.* | |||
sh - (0.5 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_arm97/bld/atm.bldlog.*.gz cat /home/jenkins/cam_output/scratch/test_scam_arm97/bld/atm.bldlog.* | |||
sh - (0.35 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_arm97/bld/cesm.bldlog.*.gz cat /home/jenkins/cam_output/scratch/test_scam_arm97/bld/cesm.bldlog.* | |||
sh - (0.44 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_arm97/run/atm.log.*.gz cat /home/jenkins/cam_output/scratch/test_scam_arm97/run/atm.log.* | |||
sh - (0.36 sec in self) | gzip -d /home/jenkins/cam_output/scratch/test_scam_arm97/run/cesm.log.*.gz cat /home/jenkins/cam_output/scratch/test_scam_arm97/run/cesm.log.* |