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Started by an SCM change
Obtained jenkins_tests/clubb_bin_diff_regression_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_bin_diff_regression_gfortran_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
 > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
Checking out Revision 9be92f7d1770866d14c86ede57d6e1e5ddbde621 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 9be92f7d1770866d14c86ede57d6e1e5ddbde621 # timeout=10
Commit message: "Copyout Nuke (#1182)"
 > git rev-list --no-walk 17f710e467c2f0d81037dcba0a0ea12b4c51d1a8 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Clone SysAdmin to tmp)
[Pipeline] sh
+ rm -rf /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
+ git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bit_diff_test_workspace/sys_admin
Cloning into '/home/jenkins/clubb_bit_diff_test_workspace/sys_admin'...
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run Python Test)
[Pipeline] sh
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/jenkins/clubb_bit_diff_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bit_diff_test_workspace/bit_diff_clubb_config
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/saturation.F90:1074:32:

 1074 |   subroutine sat_vapor_press_ice( nz, ngrdcol, T_in_K, saturation_formula, &
      |                                ^
Warning: 'sat_vapor_press_ice' defined but not used [-Wunused-function]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2136:32:

 2136 |   subroutine init_parameters_999( &
      |                                ^
Warning: 'init_parameters_999' defined but not used [-Wunused-function]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/fill_holes.F90:664:41:

  664 |                                 rho_ds_zm, rho_ds_zt, exner,                 & ! Intent(in)
      |                                         1
Warning: Unused dummy argument 'rho_ds_zm' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4987:53:

 4987 |       call calc_trapezoid_zm( nzm, nzt, ngrdcol, gr, wpthvp, wpthvp_zt, & ! Intent(in)
      |                                                     1
Warning: Same actual argument associated with INTENT(IN) argument 'variable_zm' and INTENT(OUT) argument 'trapezoid_zm' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4990:53:

 4990 |       call calc_trapezoid_zm( nzm, nzt, ngrdcol, gr, thlpthvp, thlpthvp_zt, & ! Intent(in)
      |                                                     1
Warning: Same actual argument associated with INTENT(IN) argument 'variable_zm' and INTENT(OUT) argument 'trapezoid_zm' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4993:53:

 4993 |       call calc_trapezoid_zm( nzm, nzt, ngrdcol, gr, rtpthvp, rtpthvp_zt, & ! Intent(in)
      |                                                     1
Warning: Same actual argument associated with INTENT(IN) argument 'variable_zm' and INTENT(OUT) argument 'trapezoid_zm' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4881:34:

 4881 |                                   wprtp2 )
      |                                  1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4886:34:

 4886 |                                   wpthlp2 )
      |                                  1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4891:34:

 4891 |                                   wprtpthlp )
      |                                  1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4916:30:

 4916 |                               cloud_frac )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4920:30:

 4920 |                               ice_supersat_frac )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4924:30:

 4924 |                               rcm )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4928:30:

 4928 |                               wp2thvp )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4127:40:

 4127 |   subroutine check_clubb_settings( nzmax, params,       & ! intent(in)
      |                                        1
Warning: Unused dummy argument 'nzmax' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:144:23:

  144 |                hydromet, l_mix_rat_hm, &                            ! intent(in)
      |                       1
Warning: Unused dummy argument 'hydromet' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3539:49:

 3539 |   subroutine stats_end_timestep_api( clubb_params, stats_metadata, &
      |                                                 1
Warning: Unused dummy argument 'clubb_params' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3546:55:

 3546 |                                      l_standard_term_ta & ! Unused
      |                                                       1
Warning: Unused dummy argument 'l_standard_term_ta' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3545:48:

 3545 |                                      l_tke_aniso, & ! Unused
      |                                                1
Warning: Unused dummy argument 'l_tke_aniso' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3544:49:

 3544 |                                      , l_uv_nudge, & ! Unused
      |                                                 1
Warning: Unused dummy argument 'l_uv_nudge' at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_KK_microphys.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62:

  633 |       do category=1, num_importance_categories
      |                                              2                
......
  638 |                rand_vect(sample) <  category_cumulative_probs(category+1) ) then
      |                                                              1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_coamps.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_bugsrad.a
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:616:58:

  616 |   subroutine clip_transform_silhs_output_api_multi_col( gr, &
      |                                                          1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:522:59:

  522 |   subroutine clip_transform_silhs_output_api_single_col( gr, &
      |                                                           1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:323:13:

  323 |     rho_ds_zt, & ! Unused
      |             1
Warning: Unused dummy argument 'rho_ds_zt' at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libsilhs.a
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_morrison.a
../src/Benchmark_cases/cloud_sed_module.F90:173:45:

  173 |        if ( zt2zm( gr, rcm, k )  > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
      |                                             1
Warning: Impure function 'redirect_interpolated_azm_k' at (1) might not be evaluated [-Wfunction-elimination]
../src/morrison_microphys_module.F90:20:33:

   20 |                saturation_formula, &
      |                                 1
Warning: Unused dummy argument 'saturation_formula' at (1) [-Wunused-dummy-argument]
../src/ice_dfsn_module.F90:275:25:

  210 |     do k = gr%nzt, 1, -1
      |                        2 
......
  275 |           mass_ice_cryst(k-1) = mass_ice_cryst(k)  &
      |                         1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
../src/ice_dfsn_module.F90:290:25:

  210 |     do k = gr%nzt, 1, -1
      |                        2 
......
  290 |           mass_ice_cryst(k-1) = mass_ice_cryst(k)
      |                         1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
../src/Benchmark_cases/neutral_case.F90:21:51:

   21 |   subroutine neutral_case_sfclyr( time, z, thlm_sfc, &
      |                                                   1
Warning: Unused dummy argument 'thlm_sfc' at (1) [-Wunused-dummy-argument]
../src/Benchmark_cases/neutral_case.F90:21:41:

   21 |   subroutine neutral_case_sfclyr( time, z, thlm_sfc, &
      |                                         1
Warning: Unused dummy argument 'z' at (1) [-Wunused-dummy-argument]
../src/KK_microphys_module.F90:43:35:

   43 |   subroutine KK_local_microphys( gr, dt, nzt,                           & ! In
      |                                   1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../lib/libclubb_other.a
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Expected read_random_seed for end function. 
CLUBBStandardsCheck.pl WARNING: Endings of either program, module, subroutine, or function blocks to not match the beginning 
../src/error.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Missing 'implicit none' statements. 'Implicit None' check FAILED! 
CLUBBStandardsCheck.pl Add a line containing 'implicit none' to each program, module, subroutine, and function.
../src/CLUBB_core/mt95.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1548 :       !$acc data copyin( C_uu_shr_zeros, C_uu_shr_plus_one, C11_Skw_fnc_zeros, C11_Skw_fnc_plus_one ) &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1571 :                                  lhs_wp3_pr2_term )                                     ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2677 :       !$acc data copyin( C_uu_buoy_zeros, C_uu_buoy_plus_one, C11_Skw_fnc_zeros, C11_Skw_fnc_plus_one ) &
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/advance_wp2_wp3_module.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1916 :                                   rhs_bp )                                              ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1921 :       call wpxp_terms_bp_pr3_rhs( nzm, ngrdcol, C7_Skw_fnc_plus_one, thv_ds_zm, xpthvp, & ! intent(in)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1922 :                                   rhs_pr3 )                                               ! intent(out)
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/advance_xm_wpxp_module.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................./home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2136:32:

 2136 |   subroutine init_parameters_999( &
      |                                ^
Warning: 'init_parameters_999' defined but not used [-Wunused-function]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/fill_holes.F90:664:41:

  664 |                                 rho_ds_zm, rho_ds_zt, exner,                 & ! Intent(in)
      |                                         1
Warning: Unused dummy argument 'rho_ds_zm' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:5045:53:

 5045 |       call calc_trapezoid_zm( nzm, nzt, ngrdcol, gr, wpthvp, wpthvp_zt, & ! Intent(in)
      |                                                     1
Warning: Same actual argument associated with INTENT(IN) argument 'variable_zm' and INTENT(OUT) argument 'trapezoid_zm' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:5048:53:

 5048 |       call calc_trapezoid_zm( nzm, nzt, ngrdcol, gr, thlpthvp, thlpthvp_zt, & ! Intent(in)
      |                                                     1
Warning: Same actual argument associated with INTENT(IN) argument 'variable_zm' and INTENT(OUT) argument 'trapezoid_zm' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:5051:53:

 5051 |       call calc_trapezoid_zm( nzm, nzt, ngrdcol, gr, rtpthvp, rtpthvp_zt, & ! Intent(in)
      |                                                     1
Warning: Same actual argument associated with INTENT(IN) argument 'variable_zm' and INTENT(OUT) argument 'trapezoid_zm' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4939:34:

 4939 |                                   wprtp2 )
      |                                  1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4944:34:

 4944 |                                   wpthlp2 )
      |                                  1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4949:34:

 4949 |                                   wprtpthlp )
      |                                  1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4974:30:

 4974 |                               cloud_frac )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4978:30:

 4978 |                               ice_supersat_frac )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4982:30:

 4982 |                               rcm )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4986:30:

 4986 |                               wp2thvp )
      |                              1
Warning: Same actual argument associated with INTENT(OUT) argument 'trapezoid_zt' and INTENT(IN) argument 'variable_zt' at (1)
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:4185:40:

 4185 |   subroutine check_clubb_settings( nzmax, params,       & ! intent(in)
      |                                        1
Warning: Unused dummy argument 'nzmax' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:144:23:

  144 |                hydromet, l_mix_rat_hm, &                            ! intent(in)
      |                       1
Warning: Unused dummy argument 'hydromet' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3539:49:

 3539 |   subroutine stats_end_timestep_api( clubb_params, stats_metadata, &
      |                                                 1
Warning: Unused dummy argument 'clubb_params' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3546:55:

 3546 |                                      l_standard_term_ta & ! Unused
      |                                                       1
Warning: Unused dummy argument 'l_standard_term_ta' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3545:48:

 3545 |                                      l_tke_aniso, & ! Unused
      |                                                1
Warning: Unused dummy argument 'l_tke_aniso' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/CLUBB_core/clubb_api_module.F90:3544:49:

 3544 |                                      , l_uv_nudge, & ! Unused
      |                                                 1
Warning: Unused dummy argument 'l_uv_nudge' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:616:58:

  616 |   subroutine clip_transform_silhs_output_api_multi_col( gr, &
      |                                                          1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:522:59:

  522 |   subroutine clip_transform_silhs_output_api_single_col( gr, &
      |                                                           1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
/home/jenkins/clubb_bit_diff_test_workspace/repo/compile/../src/SILHS/silhs_api_module.F90:323:13:

  323 |     rho_ds_zt, & ! Unused
      |             1
Warning: Unused dummy argument 'rho_ds_zt' at (1) [-Wunused-dummy-argument]
../src/Benchmark_cases/cloud_sed_module.F90:173:45:

  173 |        if ( zt2zm( gr, rcm, k )  > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
      |                                             1
Warning: Impure function 'redirect_interpolated_azm_k' at (1) might not be evaluated [-Wfunction-elimination]
../src/ice_dfsn_module.F90:275:25:

  210 |     do k = gr%nzt, 1, -1
      |                        2 
......
  275 |           mass_ice_cryst(k-1) = mass_ice_cryst(k)  &
      |                         1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
../src/ice_dfsn_module.F90:290:25:

  210 |     do k = gr%nzt, 1, -1
      |                        2 
......
  290 |           mass_ice_cryst(k-1) = mass_ice_cryst(k)
      |                         1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
../src/morrison_microphys_module.F90:20:33:

   20 |                saturation_formula, &
      |                                 1
Warning: Unused dummy argument 'saturation_formula' at (1) [-Wunused-dummy-argument]
../src/Benchmark_cases/neutral_case.F90:21:51:

   21 |   subroutine neutral_case_sfclyr( time, z, thlm_sfc, &
      |                                                   1
Warning: Unused dummy argument 'thlm_sfc' at (1) [-Wunused-dummy-argument]
../src/Benchmark_cases/neutral_case.F90:21:41:

   21 |   subroutine neutral_case_sfclyr( time, z, thlm_sfc, &
      |                                         1
Warning: Unused dummy argument 'z' at (1) [-Wunused-dummy-argument]
../src/KK_microphys_module.F90:43:35:

   43 |   subroutine KK_local_microphys( gr, dt, nzt,                           & ! In
      |                                   1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Expected read_random_seed for end function. 
CLUBBStandardsCheck.pl WARNING: Endings of either program, module, subroutine, or function blocks to not match the beginning 
../src/error.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Missing 'implicit none' statements. 'Implicit None' check FAILED! 
CLUBBStandardsCheck.pl Add a line containing 'implicit none' to each program, module, subroutine, and function.
../src/CLUBB_core/mt95.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Directory 1 is /home/jenkins/clubb_bit_diff_test_workspace/9be92f7d1770866d14c86ede57d6e1e5ddbde621.
Directory 2 is /home/jenkins/clubb_bit_diff_test_workspace/17f710e467c2f0d81037dcba0a0ea12b4c51d1a8.
Diffing arm netCDF (*.nc) files
Diffing arm_97 netCDF (*.nc) files
Diffing atex netCDF (*.nc) files
Diffing bomex netCDF (*.nc) files
Diffing dycoms2_rf01 netCDF (*.nc) files
Diffing dycoms2_rf02_ds netCDF (*.nc) files
Diffing gabls3_night netCDF (*.nc) files
Diffing lba netCDF (*.nc) files
Diffing rico netCDF (*.nc) files
Diffing twp_ice netCDF (*.nc) files
Diffing wangara netCDF (*.nc) files

There were no differences detected!

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/clubb_bit_diff_test_workspace
Trying to clone repo...

Cloned repo location: /home/jenkins/clubb_bit_diff_test_workspace/repo

Output Save Mode: none

Using branch: master

Making list from 'UnresolvedCommits':

Run Output Path: repo/output

Run commands: ['repo/compile/compile.bash', 'rm -rf repo/output', 'mkdir repo/output', 'repo/run_scripts/run_scm_all.bash --min-cases']

Diffing command: repo/run_scripts/run_bindiff_all.bash

=============================== Running Test ===============================

Parsing message from commit: fe6ddb2a0179dc3d9a983236a0cc7142eb82ac5f
Parsing message from commit: 9be92f7d1770866d14c86ede57d6e1e5ddbde621

Checking Commit: fe6ddb2a0179dc3d9a983236a0cc7142eb82ac5f
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: 9be92f7d1770866d14c86ede57d6e1e5ddbde621
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out 9be92f7d1770866d14c86ede57d6e1e5ddbde621
	Running: 'repo/compile/compile.bash'
	Running: 'rm -rf repo/output'
	Running: 'mkdir repo/output'
	Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
	Checking out 17f710e467c2f0d81037dcba0a0ea12b4c51d1a8
	Running: 'repo/compile/compile.bash'
	Running: 'rm -rf repo/output'
	Running: 'mkdir repo/output'
	Running: 'repo/run_scripts/run_scm_all.bash --min-cases'
	Diffing: 'repo/run_scripts/run_bindiff_all.bash 9be92f7d1770866d14c86ede57d6e1e5ddbde621 17f710e467c2f0d81037dcba0a0ea12b4c51d1a8'

=============================== Test Results ===============================

Commit Range Checked = 17f710e467c2f0d81037dcba0a0ea12b4c51d1a8...9be92f7d1770866d14c86ede57d6e1e5ddbde621

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: 9be92f7d1770866d14c86ede57d6e1e5ddbde621

=============================== Cleanup ===============================

Removed repo.

Removing all generated output
	REMOVING: 17f710e467c2f0d81037dcba0a0ea12b4c51d1a8
	REMOVING: 9be92f7d1770866d14c86ede57d6e1e5ddbde621

================== Unresolved Commit Status ==================

No remaining Unresolved Commits.

Exiting with code: 0
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS