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Started by user Steffen Domke Checking out git https://github.com/larson-group/clubb.git into /home/jenkins/workspace/branch_clubb_test@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 to read jenkins_tests/clubb_error_handling_gfortran_test/Jenkinsfile The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/branch_clubb_test@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/err_code_struct^{commit} # timeout=10 Checking out Revision 36a5af1d8ae50c28d6238db0fa978e6b19e7b0af (refs/remotes/origin/err_code_struct) > git config core.sparsecheckout # timeout=10 > git checkout -f 36a5af1d8ae50c28d6238db0fa978e6b19e7b0af # timeout=10 Commit message: "Finishing touches: Renamed OMP to chunk index, modified error headers CLUBB ticket #975" > git rev-list --no-walk 088812add7dc476a101a7d92134dff6e9a7207c2 # timeout=10 [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/branch_clubb_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/branch_clubb_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/err_code_struct^{commit} # timeout=10 Checking out Revision 36a5af1d8ae50c28d6238db0fa978e6b19e7b0af (refs/remotes/origin/err_code_struct) > git config core.sparsecheckout # timeout=10 > git checkout -f 36a5af1d8ae50c28d6238db0fa978e6b19e7b0af # timeout=10 Commit message: "Finishing touches: Renamed OMP to chunk index, modified error headers CLUBB ticket #975" [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Run test_fatal_error_handling) [Pipeline] dir Running in /home/jenkins/workspace/branch_clubb_test/run_scripts [Pipeline] { [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load gcc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Lmod Warning: ------------------------------------------------------------------------------- The following dependent module(s) are not currently loaded: gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv, netcdf-c/4.9.2, netcdf-fortran/4.5.3) ------------------------------------------------------------------------------- Shell debugging restarted + unset __lmod_sh_dbg + return 0 + ./test_fatal_error_handling.bash ......................................................................................................................................................................... Make.clubb_lapack is ready. ................................................................................... Make.clubb_param is ready. ......................... Make.clubb_bugsrad is ready. ... Make.microphys_utils is ready. ..... Make.clubb_parabolic is ready. .............. Make.clubb_KK_microphys is ready. ................................................. Make.clubb_coamps is ready. ... Make.clubb_morrison is ready. ... Make.clubb_gfdlact is ready. ............. Make.silhs is ready. ................................................................... Make.clubb_other is ready. ... Make.clubb_standalone is ready. ... Make.clubb_thread_test is ready. ............ Make.clubb_tuner is ready. ... Make.jacobian is ready. ................. Make.G_unit_tests is ready. ... Make.int2txt is ready. cd /home/jenkins/workspace/branch_clubb_test/compile/../obj; make -f Make.clubb_param cd /home/jenkins/workspace/branch_clubb_test/compile/../obj; make -f Make.clubb_gfdlact make[1]: Entering directory '/home/jenkins/workspace/branch_clubb_test/obj' gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -c /home/jenkins/workspace/branch_clubb_test/compile/../src/SCM_Activation/aer_ccn_act_k.F90 make[1]: Entering directory '/home/jenkins/workspace/branch_clubb_test/obj' gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/clubb_precision.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/error_code.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/model_flags.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/parameter_indices.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/lapack_interfaces.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/penta_lu_solver.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/tridiag_lu_solver.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/input_names.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/parameters_model.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/array_index.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/mt95.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/endian.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/code_timer_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/constants_clubb.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/stat_file_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/stats_variables.F90 ar rv /home/jenkins/workspace/branch_clubb_test/compile/../lib/libclubb_gfdlact.a aer_ccn_act_k.o ar: creating /home/jenkins/workspace/branch_clubb_test/compile/../lib/libclubb_gfdlact.a a - aer_ccn_act_k.o make[1]: Leaving directory '/home/jenkins/workspace/branch_clubb_test/obj' gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/pdf_parameter_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/matrix_operations.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/T_in_K_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/new_tsdadg_pdf.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/calc_roots.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/diagnose_correlations_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/sigma_sqd_w_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/hydromet_pdf_parameter_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/Skx_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/calendar.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/new_hybrid_pdf.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/adg1_adg2_3d_luhar_pdf.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/LY93_pdf.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/Nc_Ncn_eqns.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/file_functions.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/interpolation.F90 /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90:197:28: 197 | err_info%chunk_idx_nr = chunk_idx_in | 1 Error: 'chunk_idx_nr' at (1) is not a member of the 'err_info_type' structure; did you mean 'chunk_idx'? /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90:247:78: 247 | " / Chunk index ", err_info%chunk_idx_nr, & | 1 Error: 'chunk_idx_nr' at (1) is not a member of the 'err_info_type' structure; did you mean 'chunk_idx'? /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90:255:76: 255 | " / Chunk index ", err_info%chunk_idx_nr, & | 1 Error: 'chunk_idx_nr' at (1) is not a member of the 'err_info_type' structure; did you mean 'chunk_idx'? make[1]: *** [Make.clubb_param:62: err_info_type_module.o] Error 1 make[1]: *** Waiting for unfinished jobs.... make[1]: Leaving directory '/home/jenkins/workspace/branch_clubb_test/obj' make: *** [Makefile:14: libclubb_param.a] Error 2 ......................................................................................................................................................................... Make.clubb_lapack is ready. ................................................................................... Make.clubb_param is ready. ......................... Make.clubb_bugsrad is ready. ... Make.microphys_utils is ready. ..... Make.clubb_parabolic is ready. .............. Make.clubb_KK_microphys is ready. ................................................. Make.clubb_coamps is ready. ... Make.clubb_morrison is ready. ... Make.clubb_gfdlact is ready. ............. Make.silhs is ready. ................................................................... Make.clubb_other is ready. ... Make.clubb_standalone is ready. ... Make.clubb_thread_test is ready. ............ Make.clubb_tuner is ready. ... Make.jacobian is ready. ................. Make.G_unit_tests is ready. ... Make.int2txt is ready. cd /home/jenkins/workspace/branch_clubb_test/compile/../obj; make -f Make.clubb_param cd /home/jenkins/workspace/branch_clubb_test/compile/../obj; make -f Make.clubb_gfdlact make[1]: Entering directory '/home/jenkins/workspace/branch_clubb_test/obj' make[1]: Nothing to be done for 'all'. make[1]: Leaving directory '/home/jenkins/workspace/branch_clubb_test/obj' make[1]: Entering directory '/home/jenkins/workspace/branch_clubb_test/obj' gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/stats_type.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/input_reader.F90 gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c -I/home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/output_grads.F90 /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90:197:28: 197 | err_info%chunk_idx_nr = chunk_idx_in | 1 Error: 'chunk_idx_nr' at (1) is not a member of the 'err_info_type' structure; did you mean 'chunk_idx'? /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90:247:78: 247 | " / Chunk index ", err_info%chunk_idx_nr, & | 1 Error: 'chunk_idx_nr' at (1) is not a member of the 'err_info_type' structure; did you mean 'chunk_idx'? /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/err_info_type_module.F90:255:76: 255 | " / Chunk index ", err_info%chunk_idx_nr, & | 1 Error: 'chunk_idx_nr' at (1) is not a member of the 'err_info_type' structure; did you mean 'chunk_idx'? gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/include/ -march=native -msse3 -mfpmath=sse -fopenmp -fno-range-check -g -fbounds-check -mieee-fp -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/new_pdf.F90 make[1]: *** [Make.clubb_param:62: err_info_type_module.o] Error 1 make[1]: *** Waiting for unfinished jobs.... /home/jenkins/workspace/branch_clubb_test/compile/../src/CLUBB_core/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] make[1]: Leaving directory '/home/jenkins/workspace/branch_clubb_test/obj' make: *** [Makefile:14: libclubb_param.a] Error 2 [Pipeline] } [Pipeline] // dir [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Check for wp2 NaN error from advance_wp2_wp3) [Pipeline] sh + grep 'Error calling advance_wp2_wp3' run_scripts/advance_wp2_wp3_bad_wp2 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Check for wp2 NaN error from advance_wm_wpxp) Stage "Check for wp2 NaN error from advance_wm_wpxp" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE