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Started by user Gunther Huebler Checking out git https://github.com/larson-group/clubb.git into /home/jenkins/workspace/branch_clubb_test@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 to read jenkins_tests/clubb_nvhpc_gpu_column_mirror_test/Jenkinsfile The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/branch_clubb_test@script/05bf1b9ccde5d7fdda9b78893a3cf36477d0cb064cc71594a43c33c536a726b4 # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/clubb_driver_semi_gpuization_part4^{commit} # timeout=10 Checking out Revision 57570f98b343b01ac6c74ab60e8af0a562cb19e4 (refs/remotes/origin/clubb_driver_semi_gpuization_part4) > git config core.sparsecheckout # timeout=10 > git checkout -f 57570f98b343b01ac6c74ab60e8af0a562cb19e4 # timeout=10 Commit message: "Removing DCUDA flag from compile config scripts to help GPU and CPU results match for silhs cases" > git rev-list --no-walk 57570f98b343b01ac6c74ab60e8af0a562cb19e4 # timeout=10 [Pipeline] Start of Pipeline [Pipeline] node Running on Jenkins in /home/jenkins/workspace/branch_clubb_test@2 [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/branch_clubb_test@2 # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/clubb_driver_semi_gpuization_part4^{commit} # timeout=10 Checking out Revision 57570f98b343b01ac6c74ab60e8af0a562cb19e4 (refs/remotes/origin/clubb_driver_semi_gpuization_part4) > git config core.sparsecheckout # timeout=10 > git checkout -f 57570f98b343b01ac6c74ab60e8af0a562cb19e4 # timeout=10 Commit message: "Removing DCUDA flag from compile config scripts to help GPU and CPU results match for silhs cases" [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Modify Config Flags) [Pipeline] sh + sed -i 's:penta_solve_method.*:penta_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in [Pipeline] sh + sed -i 's:tridiag_solve_method.*:tridiag_solve_method = 2:g' input/tunable_parameters/configurable_model_flags.in [Pipeline] sh + sed -i 's:lh_straight_mc.*:lh_straight_mc = true:g' input/tunable_parameters/configurable_model_flags.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 87600:g' input/case_setups/cobra_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 90660:g' input/case_setups/arm_97_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 30000:g' input/case_setups/mc3e_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 56400:g' input/case_setups/mpace_a_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 12000:g' input/case_setups/gabls2_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 55200:g' input/case_setups/gabls3_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 88400:g' input/case_setups/gabls3_night_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 70800:g' input/case_setups/twp_ice_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 12000:g' input/case_setups/astex_a209_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 60000:g' input/case_setups/cgils_s6_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 60000:g' input/case_setups/cgils_s11_model.in [Pipeline] sh + sed -i 's:time_final.*:time_final = 60000:g' input/case_setups/cgils_s12_model.in [Pipeline] sh + sed -i 's:\(CPPDEFS=".*\)":\1 -DSILHS_MULTI_COL_RAND_DUPLICATE":' compile/config/linux_x86_64_nvhpc_gpu_openacc.bash [Pipeline] sh + run_scripts/create_multi_col_params.py -n 6 -param_file input/tunable_parameters/tunable_parameters.in -mode dup_tweak -mirror true Duplicating then tweaking params from 'input/tunable_parameters/tunable_parameters.in' '6' times. File 'clubb_params_multi_col.in' has been created l_output_multi_col is set to 'True' [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile GPU_ACC) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load nvhpc netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + compile/compile.bash -c config/linux_x86_64_nvhpc_gpu_openacc.bash ......................................................................................................................................................................... Make.clubb_lapack is ready. ................................................................................. Make.clubb_param is ready. ......................... Make.clubb_bugsrad is ready. ... Make.microphys_utils is ready. ..... Make.clubb_parabolic is ready. ..Aborted by Gunther Huebler Sending interrupt signal to process ............ Make.clubb_KK_microphys is ready. ................................................. Make.clubb_coamps is ready. ... Make.clubb_morrison is ready. ... Make.clubb_gfdlact is ready. ............. Make.silhs is ready. Terminated .................................................................. Make.clubb_other is ready. script returned exit code 143 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run GPU_ACC) Stage "Run GPU_ACC" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Check Script) Stage "Run Check Script" skipped due to earlier failure(s) [Pipeline] getContext [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: 7500d94e-f92b-4984-addd-d57100781ad9 Finished: ABORTED