Console Output

Started by user Peter Roels
Obtained Jenkinsfile from git https://github.com/larson-group/e3sm.git
Running in Durability level: MAX_SURVIVABILITY
[Pipeline] Start of Pipeline
[Pipeline] node
Running on Jenkins in /home/jenkins/workspace/e3sm_run_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/e3sm.git
 > git init /home/jenkins/workspace/e3sm_run_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/e3sm.git
 > git --version # timeout=10
 > git --version # 'git version 1.8.3.1'
using GIT_ASKPASS to set credentials THe key used by the system for the tests
 > git fetch --tags --progress https://github.com/larson-group/e3sm.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/e3sm.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
 > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10
Checking out Revision f35f8fecd8ab4a21b71914a5a22b273794e5e4de (refs/remotes/origin/clubb_silhs_devel)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f35f8fecd8ab4a21b71914a5a22b273794e5e4de # timeout=10
Commit message: "Adding post step clean up and correctly implementing run fix."
 > git rev-list --no-walk 90d3256b0b0a118cd372e163849c3317992d4e7d # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Checkout Branch and Submodules)
[Pipeline] sh
+ git submodule init
Submodule 'components/cam/src/physics/rrtmgp/external' (https://github.com/RobertPincus/rte-rrtmgp.git) registered for path 'components/cam/src/physics/rrtmgp/external'
Submodule 'components/clm/src/external_models/fates' (https://github.com/NGEET/fates.git) registered for path 'components/clm/src/external_models/fates'
Submodule 'alm-mpp' (https://github.com/MPP-LSM/MPP.git) registered for path 'components/clm/src/external_models/mpp'
Submodule 'sbetr' (https://github.com/BeTR-biogeochemistry-modeling/sbetr.git) registered for path 'components/clm/src/external_models/sbetr'
Submodule 'components/mpas-source' (https://github.com/MPAS-Dev/MPAS-Model.git) registered for path 'components/mpas-source'
Submodule 'externals/scorpio_classic' (https://github.com/E3SM-Project/scorpio.git) registered for path 'externals/scorpio_classic'
+ git submodule update
Cloning into 'components/cam/src/physics/rrtmgp/external'...
Submodule path 'components/cam/src/physics/rrtmgp/external': checked out '0b1cffdd51a35045c28aae314e2b29e2a663b5e6'
Cloning into 'components/clm/src/external_models/fates'...
Submodule path 'components/clm/src/external_models/fates': checked out '1ad93c311ed1a5d45df656b9031c8714a7071e64'
Cloning into 'components/clm/src/external_models/mpp'...
Submodule path 'components/clm/src/external_models/mpp': checked out '82ef0c1a37ffd469e9a6ce84dbf487c6ef8762b2'
Cloning into 'components/clm/src/external_models/sbetr'...
Submodule path 'components/clm/src/external_models/sbetr': checked out 'd71fb2df928099bacc4e9a3a9f4b8a1f2a6e37a1'
Cloning into 'components/mpas-source'...
Submodule path 'components/mpas-source': checked out 'bb1ea15299544e2b25144c06c621ff40fa482760'
Cloning into 'externals/scorpio_classic'...
Submodule path 'externals/scorpio_classic': checked out '1e538b56fa7cfa209c119e866a95669875eb200d'
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Modify Run Scripts)
[Pipeline] sh
+ sed -i s/carson/nelson/g nightly_test/nightly_e3sm_scm_BOMEX.csh
+ sed -i s/carson/nelson/g nightly_test/nightly_e3sm_scm_DYCOMSrf01.csh
+ sed -i s/carson/nelson/g nightly_test/nightly_e3sm_scm_RICO.csh
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run BOMEX)
[Pipeline] sh
/home/jenkins/workspace/e3sm_run_test@tmp/durable-e2e4d94a/script.sh: line 1: unexpected EOF while looking for matching `''
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run DYCOMSrf01)
Stage "Run DYCOMSrf01" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run RICO)
Stage "Run RICO" skipped due to earlier failure(s)
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] cleanWs
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] done
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
ERROR: script returned exit code 2
Finished: FAILURE