Console Output
+ cat runsam.log
number of MPI tasks: 1
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*** System for Atmospheric Modeling ***
*** SAM ***
Version 6.10.6 (May 2014)
**************************************************
*** (C) Marat Khairoutdinov ***
*** School of Marine and Atmospheric Sciences ***
*** Stony Brook University ***
**************************************************
*** The model can be used only with ***
*** permission from the author! ***
*** No transfer to any third party ***
*** is allowed! ***
**************************************************
*** DOUBLE-MOMENT VERSION OF ***
*** LIN MICROPHYSICS SCHEME ***
*** by Vaughan Phillips (GFDL, 2006) ***
*** (developed from single-moment version ***
*** by Lord et al., 1984, JAS, vol 41, 2836, ***
*** and Krueger et al, 1995, JAM, vol 34, 281)
*** Adapted by Mikhail Ovtchinnikov (PNNL, 2008)
**************************************************
*** Portions of this code ***
*** (C) UW Milwaukee 2008-2014 ***
*** Developed at the UWM Dept of ***
*** Mathematical Sciences under the ***
*** direction of Vincent E. Larson ***
*** vlarson@uwm.edu ***
**************************************************
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*** DATE 10/06/22 TIME 03:51:01 ***
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ios_missing_namelist = -1
ios for UWOPTIONS = -1
****************************************************
****** No UWOPTIONS namelist in prm file *********
****************************************************
surface pressure: 1017.79999
Initial Sounding:
k z rho rhoi s h h* qt u v adz N
40 1580.0 1.014 1.016 305.34 311.87 341.09 2.62 9.79 -0.15 1.000 87.84
39 1540.0 1.017 1.019 305.18 311.84 341.32 2.68 9.62 -0.38 1.000 86.47
38 1500.0 1.021 1.023 305.03 311.82 341.53 2.73 9.45 -0.60 1.000 84.68
37 1460.0 1.025 1.027 304.86 311.81 341.72 2.79 9.28 -0.82 1.000 83.22
36 1420.0 1.029 1.031 304.69 311.81 341.90 2.86 9.11 -1.05 1.000 81.17
35 1380.0 1.033 1.035 304.51 311.80 342.05 2.93 8.93 -1.27 1.000 79.46
34 1340.0 1.038 1.040 304.32 311.81 342.17 3.01 8.76 -1.50 1.000 77.49
33 1300.0 1.042 1.044 304.12 311.82 342.26 3.09 8.59 -1.72 1.000 75.46
32 1260.0 1.046 1.048 303.92 311.84 342.32 3.18 8.42 -1.94 1.000 73.27
31 1220.0 1.050 1.052 303.69 311.86 342.33 3.28 8.25 -2.17 1.000 71.10
30 1180.0 1.054 1.057 303.46 311.89 342.29 3.39 8.07 -2.39 1.000 68.59
29 1140.0 1.059 1.061 303.21 311.93 342.20 3.51 7.90 -2.62 1.000 65.83
28 1100.0 1.063 1.065 302.93 311.96 342.03 3.63 7.73 -2.84 1.000 63.09
27 1060.0 1.068 1.070 302.63 312.00 341.77 3.77 7.56 -3.06 1.000 59.93
26 1020.0 1.072 1.075 302.30 312.04 341.40 3.91 7.39 -3.29 1.000 56.46
25 980.0 1.077 1.080 301.93 312.06 340.88 4.07 7.21 -3.51 1.000 52.47
24 940.0 1.082 1.085 301.49 312.06 340.15 4.24 7.04 -3.74 1.000 47.73
23 900.0 1.088 1.091 300.97 312.00 339.12 4.43 6.87 -3.96 1.000 41.83
22 860.0 1.094 1.098 300.29 311.82 337.56 4.63 6.70 -4.18 1.000 33.31
21 820.0 1.101 1.120 299.22 311.29 334.72 4.85 6.53 -4.41 1.000 11.23
20 780.0 1.139 1.141 291.50 311.61 311.61 9.45 6.35 -4.63 1.000 704.3
19 740.0 1.143 1.145 291.31 311.80 311.80 9.45 6.18 -4.86 1.000 724.1
18 700.0 1.147 1.149 291.12 311.98 311.98 9.45 6.01 -5.08 1.000 724.6
17 660.0 1.151 1.153 290.93 312.17 312.17 9.45 5.84 -5.30 1.000 715.3
16 620.0 1.155 1.156 290.74 312.36 312.36 9.45 5.67 -5.53 1.000 725.6
15 580.0 1.158 1.160 290.55 312.55 312.55 9.45 5.49 -5.75 1.000 711.5
14 540.0 1.162 1.165 290.35 312.74 312.74 9.45 5.32 -5.98 1.000 721.6
13 500.0 1.166 1.168 290.16 312.93 312.93 9.45 5.15 -6.20 1.000 722.1
12 460.0 1.170 1.172 289.96 313.12 313.12 9.45 4.98 -6.42 1.000 717.7
11 420.0 1.174 1.176 289.78 313.30 313.32 9.45 4.81 -6.65 1.000 733.2
10 380.0 1.178 1.180 289.78 313.29 313.82 9.45 4.63 -6.87 1.000 718.7
9 340.0 1.182 1.184 289.78 313.29 314.33 9.45 4.46 -7.10 1.000 719.2
8 300.0 1.186 1.188 289.77 313.29 314.85 9.45 4.29 -7.32 1.000 724.6
7 260.0 1.190 1.192 289.77 313.29 315.37 9.45 4.12 -7.54 1.000 725.1
6 220.0 1.194 1.196 289.77 313.28 315.91 9.45 3.95 -7.77 1.000 725.6
5 180.0 1.198 1.201 289.77 313.28 316.45 9.45 3.77 -7.99 1.000 721.1
4 140.0 1.203 1.205 289.76 313.28 317.01 9.45 3.60 -8.22 1.000 731.6
3 100.0 1.207 1.208 289.76 313.28 317.57 9.45 3.43 -8.44 1.000 717.3
2 60.0 1.211 1.213 289.76 313.28 318.14 9.45 3.26 -8.66 1.000 722.6
k z rho rhoi s h h* qt u v adz N
k z dz pres presi Tabs tp tpl qt Qc Qi REL
40 1580.00 40.00 844.76 846.75 289.91 304.23 304.23 2.6240 0.0000 0.0000 18.26
39 1540.00 40.00 848.75 850.74 290.15 304.07 304.07 2.6760 0.0000 0.0000 18.43
38 1500.00 40.00 852.75 854.75 290.38 303.90 303.90 2.7320 0.0000 0.0000 18.62
37 1460.00 40.00 856.76 858.77 290.60 303.73 303.73 2.7930 0.0000 0.0000 18.85
36 1420.00 40.00 860.79 862.81 290.82 303.55 303.55 2.8600 0.0000 0.0000 19.13
35 1380.00 40.00 864.84 866.87 291.03 303.36 303.36 2.9310 0.0000 0.0000 19.43
34 1340.00 40.00 868.90 870.94 291.24 303.17 303.17 3.0090 0.0000 0.0000 19.78
33 1300.00 40.00 872.98 875.03 291.43 302.96 302.96 3.0930 0.0000 0.0000 20.18
32 1260.00 40.00 877.08 879.13 291.61 302.75 302.75 3.1840 0.0000 0.0000 20.63
31 1220.00 40.00 881.19 883.25 291.78 302.52 302.52 3.2820 0.0000 0.0000 21.14
30 1180.00 40.00 885.32 887.39 291.94 302.27 302.27 3.3890 0.0000 0.0000 21.71
29 1140.00 40.00 889.46 891.54 292.07 302.01 302.01 3.5050 0.0000 0.0000 22.37
28 1100.00 40.00 893.63 895.71 292.19 301.73 301.73 3.6300 0.0000 0.0000 23.10
27 1060.00 40.00 897.81 899.90 292.28 301.42 301.42 3.7660 0.0000 0.0000 23.94
26 1020.00 40.00 902.01 904.11 292.34 301.08 301.08 3.9130 0.0000 0.0000 24.91
25 980.00 40.00 906.22 908.34 292.36 300.70 300.70 4.0720 0.0000 0.0000 26.01
24 940.00 40.00 910.46 912.59 292.31 300.25 300.25 4.2450 0.0000 0.0000 27.32
23 900.00 40.00 914.72 916.85 292.18 299.72 299.72 4.4320 0.0000 0.0000 28.91
22 860.00 40.00 919.00 921.15 291.89 299.02 299.02 4.6340 0.0000 0.0000 30.94
21 820.00 40.00 923.30 925.47 291.21 297.92 297.92 4.8540 0.0000 0.0000 34.02
20 780.00 40.00 927.70 929.94 283.89 290.04 288.34 9.4500 0.6848 0.0000 100.00
19 740.00 40.00 932.18 934.42 284.09 289.85 288.33 9.4500 0.6090 0.0000 100.00
18 700.00 40.00 936.67 938.92 284.29 289.65 288.33 9.4500 0.5331 0.0000 100.00
17 660.00 40.00 941.17 943.44 284.49 289.46 288.32 9.4500 0.4569 0.0000 100.00
16 620.00 40.00 945.70 947.97 284.68 289.26 288.32 9.4500 0.3805 0.0000 100.00
15 580.00 40.00 950.24 952.51 284.88 289.07 288.31 9.4500 0.3039 0.0000 100.00
14 540.00 40.00 954.79 957.07 285.08 288.87 288.31 9.4500 0.2271 0.0000 100.00
13 500.00 40.00 959.36 961.65 285.28 288.68 288.30 9.4500 0.1501 0.0000 100.00
12 460.00 40.00 963.94 966.24 285.47 288.48 288.30 9.4500 0.0728 0.0000 100.00
11 420.00 40.00 968.54 970.85 285.68 288.30 288.30 9.4500 0.0000 0.0000 99.88
10 380.00 40.00 973.16 975.47 286.07 288.30 288.30 9.4500 0.0000 0.0000 97.80
9 340.00 40.00 977.79 980.11 286.46 288.30 288.30 9.4500 0.0000 0.0000 95.77
8 300.00 40.00 982.44 984.77 286.84 288.30 288.30 9.4500 0.0000 0.0000 93.79
7 260.00 40.00 987.10 989.44 287.23 288.30 288.30 9.4500 0.0000 0.0000 91.86
6 220.00 40.00 991.78 994.13 287.62 288.30 288.30 9.4500 0.0000 0.0000 89.97
5 180.00 40.00 996.48 998.83 288.01 288.30 288.30 9.4500 0.0000 0.0000 88.12
4 140.00 40.00 1001.19 1003.55 288.40 288.30 288.30 9.4500 0.0000 0.0000 86.32
3 100.00 40.00 1005.91 1008.28 288.79 288.30 288.30 9.4500 0.0000 0.0000 84.57
2 60.00 40.00 1010.66 1013.03 289.17 288.30 288.30 9.4500 0.0000 0.0000 82.85
1 20.00 40.00 1015.41 1017.80 289.56 288.30 288.30 9.4500 0.0000 0.0000 81.17
k z dz pres presi Tabs tp tpl qt Qc Qi REL
Smagorinsky SGS Closure
CLUBB Parameterization
CLUBB configurable flags set in thread 0:
iiPDF_type = 1
ipdf_call_placement = 2
l_use_precip_frac = T
l_predict_upwp_vpwp = T
l_min_wp2_from_corr_wx = T
l_min_xp2_from_corr_wx = T
l_C2_cloud_frac = F
l_diffuse_rtm_and_thlm = F
l_stability_correct_Kh_N2_zm = F
l_calc_thlp2_rad = T
l_upwind_xpyp_ta = T
l_upwind_xm_ma = T
l_uv_nudge = F
l_rtm_nudge = F
l_tke_aniso = T
l_vert_avg_closure = F
l_trapezoidal_rule_zt = F
l_trapezoidal_rule_zm = F
l_call_pdf_closure_twice = F
l_standard_term_ta = F
l_partial_upwind_wp3 = F
l_godunov_upwind_wpxp_ta = F
l_godunov_upwind_xpyp_ta = F
l_use_cloud_cover = F
l_diagnose_correlations = F
l_calc_w_corr = F
l_const_Nc_in_cloud = F
l_fix_w_chi_eta_correlations = T
l_stability_correct_tau_zm = F
l_damp_wp2_using_em = T
l_do_expldiff_rtm_thlm = F
l_Lscale_plume_centered = F
l_diag_Lscale_from_tau = T
l_use_C7_Richardson = T
l_use_C11_Richardson = F
l_use_shear_Richardson = F
l_brunt_vaisala_freq_moist = F
l_use_thvm_in_bv_freq = F
l_rcm_supersat_adj = T
l_damp_wp3_Skw_squared = T
l_prescribed_avg_deltaz = F
l_lmm_stepping = F
l_e3sm_config = F
l_vary_convect_depth F
l_use_tke_in_wp3_pr_turb_term = T
l_use_tke_in_wp2_wp3_K_dfsn = F
l_smooth_Heaviside_tau_wpxp = F
l_enable_relaxed_clipping = F
l_linearize_pbl_winds = F
When the l_diag_Lscale_from_tau flag is enabled, C2rt must have a value of 1.
C2rt = 2.0000000000000000
Warning in setup_clubb_core
When the l_diag_Lscale_from_tau flag is enabled, C2thl must have a value of 1.
C2thl = 2.0000000000000000
Warning in setup_clubb_core
When the l_diag_Lscale_from_tau flag is enabled, C2rtthl must have a value of 1.
C2rtthl = 2.0000000000000000
Warning in setup_clubb_core
When the l_diag_Lscale_from_tau flag is enabled, C6rt must have a value of 1.
C6rt = 2.0000000000000000
Warning in setup_clubb_core
When the l_diag_Lscale_from_tau flag is enabled, C6rtb must have a value of 1.
C6rtb = 2.0000000000000000
Warning in setup_clubb_core
When the l_diag_Lscale_from_tau flag is enabled, C6thl must have a value of 1.
C6thl = 2.0000000000000000
Warning in setup_clubb_core
When the l_diag_Lscale_from_tau flag is enabled, C6thlb must have a value of 1.
C6thlb = 2.0000000000000000
Warning in setup_clubb_core
At line 924 of file /home/jenkins/workspace/sam_clubb_silhs_gfortran_build/SRC/SGS_CLUBB/clubb_sgs.F90 (unit = 10, file = 'CLUBB_PARAMETERS/configurable_model_flags.in')
Fortran runtime error: namelist not terminated with / or &end
Error termination. Backtrace:
#0 0x7fac6e8ae820 in ???
#1 0x7fac6e8af379 in ???
#2 0x7fac6e8b005f in ???
#3 0x7fac6eade56d in ???
#4 0x7fac6eae78a7 in ???
#5 0x7fac6eae7c21 in ???
#6 0x556291259257 in __clubb_sgs_MOD_clubb_sgs_setup
at /home/jenkins/workspace/sam_clubb_silhs_gfortran_build/SRC/SGS_CLUBB/clubb_sgs.F90:924
#7 0x5562919be52c in __sgs_MOD_sgs_init
at /home/jenkins/workspace/sam_clubb_silhs_gfortran_build/SRC/SGS_CLUBB/sgs.F90:249
#8 0x556291915145 in __setdata_module_MOD_setdata
at /home/jenkins/workspace/sam_clubb_silhs_gfortran_build/SRC/setdata_module.F90:419
#9 0x5562913ff08e in crm
at /home/jenkins/workspace/sam_clubb_silhs_gfortran_build/SRC/main.F90:175
#10 0x556291406f81 in main
at /home/jenkins/workspace/sam_clubb_silhs_gfortran_build/SRC/main.F90:8
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:
Process name: [[50918,1],0]
Exit code: 2
--------------------------------------------------------------------------
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