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Started by an SCM change
Obtained jenkins_tests/sam_clubb_nvhpc_build/Jenkinsfile from git https://github.com/larson-group/sam_clubb.git
[Pipeline] Start of Pipeline
[Pipeline] node
Still waiting to schedule task
Waiting for next available executor
Running on nelson in /home/jenkins/workspace/sam_clubb_nvhpc_build
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Wiping out workspace first.
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/sam_clubb.git
 > git init /home/jenkins/workspace/sam_clubb_nvhpc_build # timeout=10
Fetching upstream changes from https://github.com/larson-group/sam_clubb.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.0'
using GIT_ASKPASS to set credentials larsongroupsysadmin github token
 > git fetch --tags --force --progress -- https://github.com/larson-group/sam_clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/larson-group/sam_clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Checking out Revision f43d9817106d75b263404a30a39e4b6615d54b57 (refs/remotes/origin/master)
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f43d9817106d75b263404a30a39e4b6615d54b57 # timeout=10
Commit message: "Autoupdated CLUBB_core Commit 09639f38d1373114e73ae7fd501310bd7e8f744f Author: Gunther Huebler Date: Wed Sep 30 14:03:07 2026 -0500 Rename derived-parameter routine across CLUBB interfaces"
 > git rev-list --no-walk c2e6e4c2b1db60a6ed4c8cd3105f994682c9cd76 # timeout=10
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Edit Makefile)
[Pipeline] sh
+ sed -i 's/CPPFLAGS += -DSILHS/#CPPFLAGS += -DSILHS/g' Makefile
[Pipeline] sh
+ sed -i 's/CPPFLAGS += -DPNNL_STATS /#CPPFLAGS += -DPNNL_STATS /g' Makefile
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Edit Default Case)
[Pipeline] sh
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Compile)
Stage "Compile" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run SAM)
Stage "Run SAM" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] sh
+ cat runsam.log
cat: runsam.log: No such file or directory
[Pipeline] echo
SAM did not create a log.
[Pipeline] sh
+ cp runsam.log /home/jenkins/test_logs/sam_clubb_nvhpc_build/
cp: cannot stat 'runsam.log': No such file or directory
[Pipeline] }
[Pipeline] // script
Error when executing always post condition:
Also:   org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: 8d660501-9d2f-4d47-b2e8-f4cd2a39d0aa
hudson.AbortException: script returned exit code 1
	at PluginClassLoader for workflow-durable-task-step//org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.handleExit(DurableTaskStep.java:693)
	at PluginClassLoader for workflow-durable-task-step//org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.check(DurableTaskStep.java:625)
	at PluginClassLoader for workflow-durable-task-step//org.jenkinsci.plugins.workflow.steps.durable_task.DurableTaskStep$Execution.run(DurableTaskStep.java:566)
	at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539)
	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
	at java.base/java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:304)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at java.base/java.lang.Thread.run(Thread.java:840)

[Pipeline] script
[Pipeline] {
[Pipeline] emailext
Sending email to: messnermet@uwm.edu
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Also:   hudson.remoting.ProxyException: org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: 0b47b393-733c-4b63-b91d-fc9e1b22dc72
hudson.remoting.ProxyException: java.nio.channels.ClosedByInterruptException
	at java.base/java.nio.channels.spi.AbstractInterruptibleChannel.end(AbstractInterruptibleChannel.java:199)
	at java.base/sun.nio.ch.FileChannelImpl.endBlocking(FileChannelImpl.java:171)
	at java.base/sun.nio.ch.FileChannelImpl.write(FileChannelImpl.java:293)
	at PluginClassLoader for workflow-support//org.jenkinsci.plugins.workflow.support.pickles.serialization.RiverWriter.<init>(RiverWriter.java:109)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsThreadGroup.saveProgram(CpsThreadGroup.java:638)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsThreadGroup.saveProgram(CpsThreadGroup.java:613)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsThreadGroup.saveProgramIfPossible(CpsThreadGroup.java:596)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsThreadGroup.run(CpsThreadGroup.java:520)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsThreadGroup$2.call(CpsThreadGroup.java:372)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsThreadGroup$2.call(CpsThreadGroup.java:302)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsVmExecutorService.lambda$wrap$4(CpsVmExecutorService.java:143)
	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
	at hudson.remoting.SingleLaneExecutorService$1.run(SingleLaneExecutorService.java:139)
	at jenkins.util.ContextResettingExecutorService$1.run(ContextResettingExecutorService.java:28)
	at jenkins.security.ImpersonatingExecutorService$1.run(ImpersonatingExecutorService.java:68)
	at jenkins.util.ErrorLoggingExecutorService.lambda$wrap$0(ErrorLoggingExecutorService.java:51)
	at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:539)
	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1136)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsVmExecutorService$1.call(CpsVmExecutorService.java:53)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsVmExecutorService$1.call(CpsVmExecutorService.java:50)
	at org.codehaus.groovy.runtime.GroovyCategorySupport$ThreadCategoryInfo.use(GroovyCategorySupport.java:136)
	at org.codehaus.groovy.runtime.GroovyCategorySupport.use(GroovyCategorySupport.java:275)
	at PluginClassLoader for workflow-cps//org.jenkinsci.plugins.workflow.cps.CpsVmExecutorService.lambda$categoryThreadFactory$0(CpsVmExecutorService.java:50)
	at java.base/java.lang.Thread.run(Thread.java:840)
Finished: FAILURE