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Started by an SCM change Obtained jenkins_tests/e3sm_ne4_silhs_run_gfortran_test/Jenkinsfile from git https://github.com/larson-group/e3sm.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task ‘Mac’ is reserved for jobs with matching label expression Running on Jenkins in /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/e3sm.git > git init /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/e3sm.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/e3sm.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/e3sm.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/clubb_silhs_devel^{commit} # timeout=10 Checking out Revision 193f959b8346d5f6bad2dcf5cab305da13d2a885 (refs/remotes/origin/clubb_silhs_devel) > git config core.sparsecheckout # timeout=10 > git checkout -f 193f959b8346d5f6bad2dcf5cab305da13d2a885 # timeout=10 Commit message: "Autoupdated CLUBB_core" > git rev-list --no-walk 03251deb52bd67a26da2af86195c3626e2d9d917 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Checkout Branch and Submodules) [Pipeline] sh + git submodule init Submodule 'components/cam/src/physics/rrtmgp/external' (https://github.com/RobertPincus/rte-rrtmgp.git) registered for path 'components/cam/src/physics/rrtmgp/external' Submodule 'components/clm/src/external_models/fates' (https://github.com/NGEET/fates.git) registered for path 'components/clm/src/external_models/fates' Submodule 'alm-mpp' (https://github.com/MPP-LSM/MPP.git) registered for path 'components/clm/src/external_models/mpp' Submodule 'sbetr' (https://github.com/BeTR-biogeochemistry-modeling/sbetr.git) registered for path 'components/clm/src/external_models/sbetr' Submodule 'components/mpas-source' (https://github.com/MPAS-Dev/MPAS-Model.git) registered for path 'components/mpas-source' Submodule 'externals/scorpio_classic' (https://github.com/E3SM-Project/scorpio.git) registered for path 'externals/scorpio_classic' + git submodule update Cloning into 'components/cam/src/physics/rrtmgp/external'... Submodule path 'components/cam/src/physics/rrtmgp/external': checked out '0b1cffdd51a35045c28aae314e2b29e2a663b5e6' Cloning into 'components/clm/src/external_models/fates'... Submodule path 'components/clm/src/external_models/fates': checked out '1ad93c311ed1a5d45df656b9031c8714a7071e64' Cloning into 'components/clm/src/external_models/mpp'... Submodule path 'components/clm/src/external_models/mpp': checked out '82ef0c1a37ffd469e9a6ce84dbf487c6ef8762b2' Cloning into 'components/clm/src/external_models/sbetr'... Submodule path 'components/clm/src/external_models/sbetr': checked out 'd71fb2df928099bacc4e9a3a9f4b8a1f2a6e37a1' Cloning into 'components/mpas-source'... Submodule path 'components/mpas-source': checked out 'bb1ea15299544e2b25144c06c621ff40fa482760' Cloning into 'externals/scorpio_classic'... Submodule path 'externals/scorpio_classic': checked out '1e538b56fa7cfa209c119e866a95669875eb200d' [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Remove Old Output) [Pipeline] sh + rm -rf /home/jenkins/E3SM_simulations [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run) [Pipeline] sh + csh nightly_test/nightly_e3sm_ne4_silhs.csh run_e3sm: ++++++++ run_e3sm starting (Tue Jul 27 03:46:44 CDT 2021), version 3.0.22 ++++++++ run_e3sm: $case_name = nelson.mg2_def.ne4_ne4 run_e3sm: -------- Starting create_newcase -------- run_e3sm: /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test//cime/scripts/create_newcase --case nelson.mg2_def.ne4_ne4 --compset FC5AV1C-L --script-root /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts --res ne4_ne4 --pecount M --handle-preexisting-dirs u --mach nelson --output-root /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4 --project condo Compset longname is 2000_CAM5%AV1C-L_CLM45%SPBC_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV Compset specification file is /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cam/cime_config/config_compsets.xml Automatically adding SIAC to compset Automatically adding SESP to compset Compset forcing is Com forcing is present day: ATM component is cam5 physics:CAM with complete set of E3SM atmospheric mods for V1 (72 layers model) and ACES4BGC SOAG emissions- v04p2: LND component is clm4.5 physics:clm4.5 Satellite phenology:clm4.5 Satellite phenology with black carbon deposition: ICE component is prescribed cice: OCN component is DOCN prescribed ocean mode ROF component is Stub river component GLC component is Stub glacier (land ice) component WAV component is Stub wave component IAC component is Stub iac component ESP component is Stub external system processing (ESP) component Pes specification file is /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/config/e3sm/allactive/config_pesall.xml Machine is nelson Pes setting: grid is a%ne4np4_l%ne4np4_oi%ne4np4_r%null_g%null_w%null_z%null_m%oQU240 Pes setting: compset is 2000_CAM5%AV1C-L_CLM45%SPBC_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP Pes setting: tasks is {'NTASKS_ATM': 16, 'NTASKS_ICE': 16, 'NTASKS_CPL': 16, 'NTASKS_LND': 16, 'NTASKS_WAV': 16, 'NTASKS_ROF': 16, 'NTASKS_OCN': 16, 'NTASKS_GLC': 16} Pes setting: threads is {'NTHRDS_ICE': 1, 'NTHRDS_ATM': 1, 'NTHRDS_ROF': 1, 'NTHRDS_LND': 1, 'NTHRDS_WAV': 1, 'NTHRDS_OCN': 1, 'NTHRDS_CPL': 1, 'NTHRDS_GLC': 1} Pes setting: rootpe is {'ROOTPE_OCN': 0, 'ROOTPE_LND': 0, 'ROOTPE_ATM': 0, 'ROOTPE_ICE': 0, 'ROOTPE_WAV': 0, 'ROOTPE_CPL': 0, 'ROOTPE_ROF': 0, 'ROOTPE_GLC': 0} Pes setting: pstrid is {} Pes other settings: {} Pes comments: none Compset is: 2000_CAM5%AV1C-L_CLM45%SPBC_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV_SIAC_SESP Grid is: a%ne4np4_l%ne4np4_oi%ne4np4_r%null_g%null_w%null_z%null_m%oQU240 Components in compset are: ['cam', 'clm', 'cice', 'docn', 'srof', 'sglc', 'swav', 'siac', 'sesp', 'drv'] No charge_account info available, using value from PROJECT e3sm model version found: 193f959 Batch_system_type is none Creating Case directory /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts run_e3sm: -------- Finished create_newcase -------- run_e3sm: Project used for submission: condo run_e3sm: Configuring E3SM to use the COSP simulator. run_e3sm: -------- Starting case.setup -------- run_e3sm: /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts/case.setup /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts/env_mach_specific.xml already exists, delete to replace /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts/env_mach_specific.xml already exists, delete to replace Creating batch scripts Writing case.run script from input template /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/config/e3sm/machines/template.case.run Creating file .case.run Writing case.st_archive script from input template /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/config/e3sm/machines/template.st_archive Creating file case.st_archive Creating file .case.run.sh Creating user_nl_xxx files for components and cpl If an old case build already exists, might want to run 'case.build --clean' before building Generating component namelists as part of setup Creating component namelists 2021-07-27 03:46:52 atm Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cam/cime_config/buildnml 2021-07-27 03:46:53 lnd Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/clm/cime_config/buildnml 2021-07-27 03:46:53 ice Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cice/cime_config/buildnml 2021-07-27 03:46:53 ocn Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/data_comps/docn/cime_config/buildnml 2021-07-27 03:46:54 rof Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/srof/cime_config/buildnml 2021-07-27 03:46:54 glc Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sglc/cime_config/buildnml 2021-07-27 03:46:54 wav Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/swav/cime_config/buildnml 2021-07-27 03:46:54 iac Running /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/siac/cime_config/buildnml 2021-07-27 03:46:54 esp Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sesp/cime_config/buildnml 2021-07-27 03:46:54 cpl Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists You can now run './preview_run' to get more info on how your case will be run run_e3sm: -------- Finished case.setup -------- run_e3sm: Creating logical links to make navigating easier. run_e3sm: Note: Beware of using ".." with the links, since the behavior of shell commands can vary. run_e3sm: /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/nightly_test/nightly_e3sm_ne4_silhs.csh=a_run_link run_e3sm: run_root /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4 run_e3sm: run_dir /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/nightly_test/nightly_e3sm_ne4_silhs.csh=a_run_link setting case file to env_run.xml run_e3sm: -------- Starting Build -------- run_e3sm: WARNING: Make sure there are no double-slashes (//) in the build command below: => Will cause a build error run_e3sm: /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts/case.build Building case in directory /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts sharedlib_only is False model_only is False Generating component namelists as part of build Creating component namelists 2021-07-27 03:46:55 atm Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cam/cime_config/buildnml 2021-07-27 03:46:55 lnd Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/clm/cime_config/buildnml 2021-07-27 03:46:55 ice Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cice/cime_config/buildnml 2021-07-27 03:46:55 ocn Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/data_comps/docn/cime_config/buildnml 2021-07-27 03:46:55 rof Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/srof/cime_config/buildnml 2021-07-27 03:46:55 glc Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sglc/cime_config/buildnml 2021-07-27 03:46:55 wav Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/swav/cime_config/buildnml 2021-07-27 03:46:55 iac Running /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/siac/cime_config/buildnml 2021-07-27 03:46:55 esp Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sesp/cime_config/buildnml 2021-07-27 03:46:55 cpl Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists Building gptl with output to file /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/gptl.bldlog.210727-034655 Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/build_scripts/buildlib.gptl Component gptl build complete with 1 warnings Building mct with output to file /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/mct.bldlog.210727-034655 Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/build_scripts/buildlib.mct Building pio with output to file /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/pio.bldlog.210727-034655 Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/build_scripts/buildlib.pio Building csm_share with output to file /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/csm_share.bldlog.210727-034655 Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/build_scripts/buildlib.csm_share Component csm_share build complete with 4 warnings - Building atm Library Building atm with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/atm.bldlog.210727-034655 - Building lnd Library - Building ice Library Building lnd with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/lnd.bldlog.210727-034655 Building ice with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/ice.bldlog.210727-034655 - Building ocn Library - Building rof Library Building ocn with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/ocn.bldlog.210727-034655 - Building glc Library Building rof with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/rof.bldlog.210727-034655 Building glc with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/glc.bldlog.210727-034655 - Building wav Library Building wav with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/wav.bldlog.210727-034655 - Building iac Library Building iac with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/iac.bldlog.210727-034655 - Building esp Library Building esp with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/esp.bldlog.210727-034655 sglc built in 0.753226 seconds sesp built in 0.713907 seconds srof built in 0.852795 seconds siac built in 0.888183 seconds swav built in 0.938630 seconds docn built in 1.903683 seconds Component ice build complete with 9 warnings Component ice build complete with 9 warnings cice built in 33.481827 seconds Component lnd build complete with 6 warnings Component lnd build complete with 6 warnings clm built in 189.185128 seconds Component atm build complete with 5 warnings Component atm build complete with 5 warnings cam built in 212.497713 seconds Building e3sm with output to /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/e3sm.bldlog.210727-034655 Component e3sm exe build complete with 3 warnings Time spent not building: 1.051013 sec Time spent building: 263.713200 sec MODEL BUILD HAS FINISHED SUCCESSFULLY run_e3sm: -------- Finished Build -------- Creating component namelists 2021-07-27 03:51:20 atm Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cam/cime_config/buildnml 2021-07-27 03:51:20 lnd Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/clm/cime_config/buildnml 2021-07-27 03:51:20 ice Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cice/cime_config/buildnml 2021-07-27 03:51:20 ocn Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/data_comps/docn/cime_config/buildnml 2021-07-27 03:51:20 rof Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/srof/cime_config/buildnml 2021-07-27 03:51:20 glc Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sglc/cime_config/buildnml 2021-07-27 03:51:20 wav Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/swav/cime_config/buildnml 2021-07-27 03:51:20 iac Running /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/siac/cime_config/buildnml 2021-07-27 03:51:20 esp Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sesp/cime_config/buildnml 2021-07-27 03:51:20 cpl Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists run_e3sm: WARNING: This script does not have batch directives for $machine=nelson run_e3sm: Assuming default E3SM values. run_e3sm: condo not recognized as a group, results must be shared manually run_e3sm: $model_start_type = initial (This is NOT necessarily related to RUN_TYPE) run_e3sm: -------- Starting Submission to Run Queue -------- run_e3sm: SUBMITTING JOB: run_e3sm: /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts/case.submit Creating component namelists 2021-07-27 03:51:23 atm Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cam/cime_config/buildnml 2021-07-27 03:51:23 lnd Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/clm/cime_config/buildnml 2021-07-27 03:51:23 ice Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cice/cime_config/buildnml 2021-07-27 03:51:23 ocn Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/data_comps/docn/cime_config/buildnml 2021-07-27 03:51:23 rof Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/srof/cime_config/buildnml 2021-07-27 03:51:23 glc Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sglc/cime_config/buildnml 2021-07-27 03:51:23 wav Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/swav/cime_config/buildnml 2021-07-27 03:51:23 iac Running /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/siac/cime_config/buildnml 2021-07-27 03:51:23 esp Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sesp/cime_config/buildnml 2021-07-27 03:51:23 cpl Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists Checking that inputdata is available as part of case submission Loading input file list: 'Buildconf/cpl.input_data_list' Loading input file list: 'Buildconf/docn.input_data_list' Loading input file list: 'Buildconf/clm.input_data_list' Loading input file list: 'Buildconf/cam.input_data_list' Loading input file list: 'Buildconf/cice.input_data_list' Check case OK submit_jobs case.run Submit job case.run Starting job script case.run 2021-07-27 03:51:24 CASE.RUN BEGINS HERE 2021-07-27 03:51:24 RUN_MODEL BEGINS HERE 2021-07-27 03:51:24 PRE_RUN_CHECK BEGINS HERE 2021-07-27 03:51:24 NAMELIST CREATION BEGINS HERE Generating namelists for /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/case_scripts Creating component namelists 2021-07-27 03:51:24 atm Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cam/cime_config/buildnml 2021-07-27 03:51:24 lnd Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/clm/cime_config/buildnml 2021-07-27 03:51:24 ice Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/components/cice/cime_config/buildnml 2021-07-27 03:51:24 ocn Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/data_comps/docn/cime_config/buildnml 2021-07-27 03:51:24 rof Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/srof/cime_config/buildnml 2021-07-27 03:51:24 glc Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sglc/cime_config/buildnml 2021-07-27 03:51:24 wav Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/swav/cime_config/buildnml 2021-07-27 03:51:24 iac Running /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/siac/cime_config/buildnml 2021-07-27 03:51:24 esp Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/components/stub_comps/sesp/cime_config/buildnml 2021-07-27 03:51:24 cpl Calling /home/jenkins/workspace/e3sm_ne4_silhs_run_gfortran_test/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists 2021-07-27 03:51:24 NAMELIST CREATION HAS FINISHED ------------------------------------------------------------------------- - Prestage required restarts into /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/run - Case input data directory (DIN_LOC_ROOT) is /home/pub/cam_inputdata - Checking for required input datasets in DIN_LOC_ROOT ------------------------------------------------------------------------- 2021-07-27 03:51:24 PRE_RUN_CHECK HAS FINISHED run command is /usr/local/mpi/MPICH-3.3.1-gfortran/bin/mpirun -np 1 -prepend-rank /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/e3sm.exe >> e3sm.log.$LID 2>&1 2021-07-27 03:51:24 SAVE_PRERUN_PROVENANCE BEGINS HERE 2021-07-27 03:51:24 SAVE_PRERUN_PROVENANCE HAS FINISHED 2021-07-27 03:51:24 MODEL EXECUTION BEGINS HERE 2021-07-27 03:51:24 MODEL EXECUTION HAS FINISHED Exception from case_run: ERROR: RUN FAIL: Command '/usr/local/mpi/MPICH-3.3.1-gfortran/bin/mpirun -np 1 -prepend-rank /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/build/e3sm.exe >> e3sm.log.$LID 2>&1 ' failed See log file for details: /home/jenkins/E3SM_simulations/nelson.mg2_def.ne4_ne4/run/e3sm.log.210727-035124 Submitted job case.run with id None run_e3sm: -------- Finished Submission to Run Queue -------- run_e3sm: ++++++++ run_e3sm Completed (Tue Jul 27 03:51:24 CDT 2021) ++++++++ [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS