+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ run_scripts/run_timestep_tests.bash
Running all cases at a(n) 600.0 second time step.
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running all cases at a(n) 900.0 second time step.
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 51.97/ 4.93
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 51.97/ 4.93
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in clubb, check your parameter values and timestep
WARNING! Main loop timing budget has errors in excess of 1 per cent!
after run_clubb
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
gabls3_night failure
Running all cases at a(n) 1200.0 second time step.
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 51.97/ 4.93
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 51.97/ 4.93
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in clubb, check your parameter values and timestep
WARNING! Main loop timing budget has errors in excess of 1 per cent!
after run_clubb
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
gabls3_night failure
Running all cases at a(n) 1800.0 second time step.
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 51.97/ 4.93
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 51.97/ 4.93
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in clubb, check your parameter values and timestep
WARNING! Main loop timing budget has errors in excess of 1 per cent!
after run_clubb
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
gabls3 failure
Running all cases at a(n) 2700.0 second time step.
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
at /home/jenkins/workspace/clubb_timestep_gfortran_tests/compile/../src/CLUBB_core/advance_clubb_core_module.F90:1417
#3 0x6d9a7a in __clubb_api_module_MOD_advance_clubb_core_api_multi_col
at /home/jenkins/workspace/clubb_timestep_gfortran_tests/compile/../src/CLUBB_core/clubb_api_module.F90:1981
#4 0x42c933 in __clubb_driver_MOD_run_clubb
at ../src/clubb_driver.F90:2978
#5 0x403ad9 in clubb_standalone
at ../src/clubb_standalone.F90:106
#6 0x403736 in main
at ../src/clubb_standalone.F90:11
./run_scm.bash: line 44: 2977722 Floating point exception(core dumped) $CLUBB_EXECUTABLE_FILE
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
gabls3 failure
Running all cases at a(n) 3600.0 second time step.
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 31.50/******
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error advance_clubb_core in API module
Fatal error in CLUBB - MPI Process 1 / Chunk index 1
Column index not available. Latitude/Longitude for column 1: 31.50/******
Latitude range from -90 to 90 degrees, Longitude range from -180 to 180 degrees
Fatal error in clubb, check your parameter values and timestep
WARNING! Main loop timing budget has errors in excess of 1 per cent!
after run_clubb
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
at /home/jenkins/workspace/clubb_timestep_gfortran_tests/compile/../src/CLUBB_core/advance_clubb_core_module.F90:1417
#3 0x6d9a7a in __clubb_api_module_MOD_advance_clubb_core_api_multi_col
at /home/jenkins/workspace/clubb_timestep_gfortran_tests/compile/../src/CLUBB_core/clubb_api_module.F90:1981
#4 0x42c933 in __clubb_driver_MOD_run_clubb
at ../src/clubb_driver.F90:2978
#5 0x403ad9 in clubb_standalone
at ../src/clubb_standalone.F90:106
#6 0x403736 in main
at ../src/clubb_standalone.F90:11
./run_scm.bash: line 44: 2980558 Floating point exception(core dumped) $CLUBB_EXECUTABLE_FILE
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
dycoms2_rf02_ds failure
gabls3 failure
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