Console Output

+ run_scripts/run_clubb_conv_test.bash
Creating initial bomex 90-min run... Done!
Restarting bomex with time step 1 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_1/bomex_zt.nc'
Restarting bomex with time step 2 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_2/bomex_zt.nc'
Restarting bomex with time step 4 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_4/bomex_zt.nc'
Restarting bomex with time step 8 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_8/bomex_zt.nc'
Restarting bomex with time step 16 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_16/bomex_zt.nc'
Restarting bomex with time step 30 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_30/bomex_zt.nc'
Restarting bomex with time step 60 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_60/bomex_zt.nc'
Restarting bomex with time step 120 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_120/bomex_zt.nc'
Restarting bomex with time step 240 seconds... Done!
Traceback (most recent call last):
  File "<string>", line 7, in <module>
  File "netCDF4/_netCDF4.pyx", line 2358, in netCDF4._netCDF4.Dataset.__init__
  File "netCDF4/_netCDF4.pyx", line 1926, in netCDF4._netCDF4._ensure_nc_success
FileNotFoundError: [Errno 2] No such file or directory: b'../output/timestep_240/bomex_zt.nc'
-c:10: UserWarning: loadtxt: Empty input file: "convergence.data"
/usr/local/lib64/python3.6/site-packages/numpy/core/fromnumeric.py:3584: RuntimeWarning: Degrees of freedom <= 0 for slice
  **kwargs)
/usr/local/lib64/python3.6/site-packages/numpy/core/_methods.py:186: RuntimeWarning: invalid value encountered in true_divide
  arrmean, rcount, out=arrmean, casting='unsafe', subok=False)
/usr/local/lib64/python3.6/site-packages/numpy/core/_methods.py:209: RuntimeWarning: invalid value encountered in double_scalars
  ret = ret.dtype.type(ret / rcount)
Generating plot...
slope =  nan
CLUBB failed to converge!