Skipping 104 KB.. Full Log

[ 35%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/dtrmv.f.o
[ 35%] Built target clubb_lapack_single
[ 35%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/idamax.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ieeeck.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iladlc.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iladlr.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/ilaenv.f.o
[ 36%] Building Fortran object src/Lapack/Lapack_double/CMakeFiles/clubb_lapack_double.dir/iparmq.f.o
[ 36%] Built target clubb_lapack_double
[ 37%] Linking Fortran static library liblapack_lib.a
[ 37%] Built target lapack_lib
Scanning dependencies of target clubb_core_lib
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/error_code.F90.o
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_precision.F90.o
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameter_indices.F90.o
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/model_flags.F90.o
[ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_interfaces.F90.o
[ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/array_index.F90.o
[ 38%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/constants_clubb.F90.o
[ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_lu_solver.F90.o
[ 39%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/tridiag_lu_solver.F90.o
[ 40%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/endian.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/endian.F90:167:53:

  167 |     call mvbits( i_element, 56, 8, i_element_br, 0  )
      |                                                     ^
Warning: 'i_element_br' is used uninitialized [-Wuninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/endian.F90:159:39:

  159 |     integer(kind=int64) :: i_element_br
      |                                       ^
note: 'i_element_br' declared here
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/endian.F90:123:53:

  123 |     CALL MVBITS( i_element, 24, 8, i_element_br, 0  )
      |                                                     ^
Warning: 'i_element_br' is used uninitialized [-Wuninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/endian.F90:117:69:

  117 |     INTEGER(KIND=int32)                               :: i_element_br
      |                                                                     ^
note: 'i_element_br' declared here
[ 40%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/LY93_pdf.F90.o
[ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Nc_Ncn_eqns.F90.o
[ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/T_in_K_module.F90.o
[ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_roots.F90.o
[ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/err_info_type_module.F90.o
[ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/file_functions.F90.o
[ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calendar.F90.o
[ 42%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/penta_bicgstab_solver.F90.o
[ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mean_adv.F90.o
[ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/penta_bicgstab_solver.F90:140:10:

  140 |       if ( norm_rhs == 0.0) then
      |          1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
[ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf.F90.o
[ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_tsdadg_pdf.F90.o
[ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/hydromet_pdf_parameter_module.F90.o
[ 43%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diagnose_correlations_module.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/code_timer_module.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/interpolation.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_operations.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/lapack_wrap.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Skx_module.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/adg1_adg2_3d_luhar_pdf.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_class.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/corr_varnce_module.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/index_mapping.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/matrix_solver_wrapper.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o
[ 44%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:1212:43:

 1212 |             if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then
      |                                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:1106:15:

 1106 |             if(dm(i) == zero) then
      |               1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/parameters_tunable.F90:1822:30:

 1822 |   subroutine unpack_parameters &
      |                              ^
Warning: 'unpack_parameters' defined but not used [-Wunused-function]
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
[649/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sigma_sqd_w_module.F90.o
[650/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/diffusion.F90.o
[651/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pos_definite_module.F90.o
[652/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/saturation.F90.o
[653/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/turbulent_adv_pdf.F90.o
[654/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:1212:43:

 1212 |             if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then
      |                                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:1106:15:

 1106 |             if(dm(i) == zero) then
      |               1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
      |                                                                       ^
Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:129:17:

  129 |       level_below, &        ! The altitude of the level or spline connection point below   [m]
      |                 ^
note: 'level_below' was declared here
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
      |                                                                       ^
Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:128:15:

  128 |       val_below, &          ! The rho value of the level or spline connection point below  [kg/m^3]
      |               ^
note: 'val_below' was declared here
[655/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o
[656/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/parameters_tunable.F90:1822:30:

 1822 |   subroutine unpack_parameters &
      |                              ^
Warning: 'unpack_parameters' defined but not used [-Wunused-function]
[657/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o
[658/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf_main.F90.o
[659/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o
[660/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o
[661/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o
[662/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mono_flux_limiter.F90.o
[663/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o
[664/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o
[665/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o
[666/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o
[667/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/fill_holes.F90.o
[668/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o
[669/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/mixing_length.F90:1096:16:

 1096 |             if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= &
      |                ^
Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/mixing_length.F90:730:42:

  730 |     real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1
      |                                          ^
note: 'dcape_dz_j' was declared here
[670/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o
[671/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o
[672/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o
[673/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o
[674/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/advance_wp2_wp3_module.F90:1927:12:

 1927 |         if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then
      |            ^
Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20:

 1470 |       wp2_avg_before, &
      |                    ^
note: 'wp2_avg_before' was declared here
[675/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o
[676/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o
[677/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o
[678/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o
[679/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o
[680/923] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a
[681/923] Generating Fortran dyndep file src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/Fortran.dd
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[685/923] Generating Fortran dyndep file src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/Fortran.dd
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[747/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw.F.o
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[749/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_ocastrndm.F90.o
[750/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloud_correlate.F90.o
[751/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmcol.F.o
[752/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/AiryFunction.f90.o
[753/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_iter.F.o
[754/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_bs.F.o
[755/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_sw_ocastrndm.F90.o
[756/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/gases_ckd.F90.o
[757/923] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjtq.F.o
[758/923] Linking Fortran static library src/Microphys/COAMPS_microphys/libcoamps_lib.a
[759/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_lwr.F.o
[760/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_swr.F.o
[761/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_rad.F.o
[762/923] Linking Fortran static library src/Radiation/BUGSrad/libbugsrad_lib.a
[763/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic.f90.o
[764/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_utilities.F90.o
[765/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_means.F90.o
[766/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_covar.F90.o
[767/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_all_MM.F90.o
[768/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_means.F90.o
[769/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_variances.F90.o
[770/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_Nrm_tendencies.F90.o
[771/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_turbulent_sed.F90.o
[772/923] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_covariances.F90.o
[773/923] Linking Fortran static library src/Microphys/KK_microphys/libKK_microphys_lib.a
[774/923] Generating Fortran dyndep file src/SILHS/CMakeFiles/silhs_lib.dir/Fortran.dd
[775/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_arrays.F90.o
[776/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/parameters_silhs.F90.o
[777/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/est_kessler_microphys_module.F90.o
[778/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/transform_to_pdf_module.F90.o
[779/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/mt95.F90.o
      |                                                                       ^
Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:129:17:

  129 |       level_below, &        ! The altitude of the level or spline connection point below   [m]
      |                 ^
note: 'level_below' was declared here
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
      |                                                                       ^
Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/remapping_module.F90:128:15:

  128 |       val_below, &          ! The rho value of the level or spline connection point below  [kg/m^3]
      |               ^
note: 'val_below' was declared here
[ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o
[ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o
[ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_pdf_main.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/fill_holes.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_helper_module.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mono_flux_limiter.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp3_module.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/precipitation_fraction.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/numerical_check.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clip_explicit.F90.o
[ 47%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_utilities.F90.o
[ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o
[ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o
[ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o
[ 48%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o
[ 49%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o
[ 49%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xm_wpxp_module.F90.o
[ 49%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/mixing_length.F90.o
[ 49%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_closure_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/mixing_length.F90:1096:16:

 1096 |             if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= &
      |                ^
Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/mixing_length.F90:730:42:

  730 |     real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1
      |                                          ^
note: 'dcape_dz_j' was declared here
[ 50%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o
[ 51%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/advance_wp2_wp3_module.F90:1927:12:

 1927 |         if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then
      |            ^
Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20:

 1470 |       wp2_avg_before, &
      |                    ^
note: 'wp2_avg_before' was declared here
[ 52%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o
[ 52%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o
[ 52%] Linking Fortran static library libclubb_core_lib.a
[ 52%] Built target clubb_core_lib
Scanning dependencies of target text_writer_lib
Scanning dependencies of target morrison_microphys_lib
Scanning dependencies of target bugsrad_lib
Scanning dependencies of target KK_microphys_lib
Scanning dependencies of target coamps_lib
[ 52%] Building Fortran object src/CMakeFiles/text_writer_lib.dir/text_writer.F90.o
[ 52%] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o
[ 52%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic_constants.f90.o
[ 53%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/kinds.F90.o
[ 53%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjtq.F.o
[ 53%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/parameters_KK.F90.o
[ 54%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/conice.F.o
[ 54%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjmlt.F.o
[ 54%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_physconst.F90.o
[ 54%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/AiryFunction.f90.o
[ 54%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa10g.F.o
[ 54%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugsrad_planck.F90.o
[ 55%] Linking Fortran static library libtext_writer_lib.a
[ 55%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloud_correlate.F90.o
[ 55%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa11g.F.o
[ 55%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12.F.o
[ 55%] Built target text_writer_lib
[ 55%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_local_means.F90.o
[ 55%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/newexp.F90.o
[ 55%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa12g.F.o
[ 56%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_rad.F.o
[ 57%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/cloudg.F.o
[ 57%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp1.F.o
[ 57%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Parabolic.f90.o
[ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa13g.F.o
[ 58%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/comscp2.F.o
[ 58%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/rayle.F.o
[ 58%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw.F.o
[ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa14g.F.o
[ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa15.F.o
[ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa17g.F.o
[ 58%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18.F.o
[ 59%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa18g.F.o
[ 59%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19.F.o
[ 59%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa19g.F.o
[ 59%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa20g.F.o
[780/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o
[781/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o
[782/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o
[783/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/SILHS/silhs_importance_sample_module.F90:642:62:

  637 |       do category=1, num_importance_categories
      |                                              2                
......
  642 |                rand_vect(sample) <  category_cumulative_probs(category+1) ) then
      |                                                              1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
[784/923] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o
[785/923] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a
[786/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/SILHS/latin_hypercube_driver_module.F90:1597:10:

 1597 |       if ( X_u_chi(sample) < (one - cloud_frac_i) ) then
      |          ^
Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/SILHS/latin_hypercube_driver_module.F90:1579:18:

 1579 |       cloud_frac_i
      |                  ^
note: 'cloud_frac_i' was declared here
[787/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o
[788/923] Linking Fortran static library src/SILHS/libsilhs_lib.a
[789/923] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd
[790/923] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd
[791/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o
[792/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o
[793/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o
[794/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o
[795/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o
[796/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o
[797/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o
[798/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o
[799/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o
[800/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o
[801/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o
[802/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
[803/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o
[804/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o
[805/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
/home/jenkins/workspace/clubb_timestep/src/Numerical_recipes/ran_state.f90:8:59:

    8 |   INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1
      |                                                           1
Warning: Integer outside symmetric range implied by Standard Fortran at (1)
[806/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[807/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[808/923] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a
[809/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o
[810/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[811/923] Linking Fortran static library src/Radiation/libradiation_lib.a
[812/923] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd
[813/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o
[814/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o
[815/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o
[816/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
[817/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o
[818/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o
/home/jenkins/workspace/clubb_timestep/src/Input_fields/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[819/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[820/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[821/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[822/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1470:21:

 1470 |    if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1
      |                     1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1492:18:

 1492 |       if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1
      |                  1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1038:15:

 1038 |             if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1040:15:

 1040 |             if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1042:15:

 1042 |             if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1045:15:

 1045 |             if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1047:15:

 1047 |             if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1049:15:

 1049 |             if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:356:13:

  356 |      if( ANY(Ts_in == 0.0) ) then
      |             1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:620:12:

  620 |          if(T_in(i,nlev+1)/=missing_value) then
      |            1
Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:636:12:

  636 |          if(T_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:638:12:

  638 |          if(q_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:640:12:

  640 |          if(u_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:642:12:

  642 |          if(v_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:647:15:

  647 |             if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:651:15:

  651 |             if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:658:12:

  658 |          if(ug_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:660:12:

  660 |          if(vg_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1252:42:

 1252 |   character     dim_name*( NF90_MAX_NAME )
      |                                          1
Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1254:33:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                 1
Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1254:43:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                           1
Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1254:46:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                              1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1237:60:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                            1
Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1237:54:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                      1
Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1238:23:

 1238 |      var, use_NF90_REAL, status, required)
      |                       1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1167:67:

 1167 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, &
      |                                                                   1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:751:51:

  751 |                                get_add_surface_data, ntime, &
      |                                                   1
Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:750:81:

  750 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, &
      |                                                                                 1
Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:290:32:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                1
Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:290:38:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                      1
Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:291:19:

  291 |    integer :: varID, NCID
      |                   1
Warning: Unused variable 'varid' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:788:31:

  788 |    tausrf_in(:) = missing_value
      |                               ^
Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:59:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                                           ^
note: 'tausrf_in.dim[0].ubound' was declared here
[823/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:260:16:

  260 |     integer :: k
      |                1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:264:17:

  264 |       qtm_forcing  ! Specified total water spec. humidity tendency    [kg/kg/s]
      |                 1
Warning: Unused variable 'qtm_forcing' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:243:31:

  243 | subroutine readiopdata_frc( rtm, gr, thlm_forcing, rtm_forcing )
      |                               1
Warning: Unused dummy argument 'rtm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:285:47:

  285 |     thlm_forcing(1:nlevels) = dtls(1:nlevels,1)
      |                                               ^
Warning: 'nlevels' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:258:22:

  258 |     integer :: nlevels
      |                      ^
note: 'nlevels' was declared here
[824/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'kappa' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:57:8:

   57 |     use input_names, only: &
      |        1
Warning: Unused parameter 'omega_name' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'p0' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:165:13:

  165 |       p_in_Pa, & ! Pressure                               [Pa]
      |             1
Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:160:8:

  160 |       rt,      & ! Total water mixing ratio sounding      [kg/kg]
      |        1
Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:166:10:

  166 |       subs       ! Vertical velocity sounding             [m/s or Pa/s]
      |          1
Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:159:11:

  159 |       theta,   & ! Liquid potential temperature sounding  [K]
      |           1
[ 60%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_iter.F.o
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[ 60%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/two_rt_lw_sel.F.o
[ 61%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa21.F.o
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[ 64%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa5g.F.o
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[ 64%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7.F.o
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[ 64%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/eqa7g.F.o
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[ 65%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/esatv.F.o
[ 66%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/frzh.F.o
[ 66%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/gamma.F.o
[ 66%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmcol.F.o
[ 66%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqi.F.o
[ 67%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqw.F.o
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[ 68%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_utilities.F90.o
[ 68%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qtadj.F.o
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[ 68%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_means.F90.o
[ 69%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqi.F.o
[ 69%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_covar.F90.o
[ 69%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqr.F.o
[ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_all_MM.F90.o
[ 70%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqs.F.o
[ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_means.F90.o
[ 70%] Linking Fortran static library libcoamps_lib.a
[ 70%] Built target coamps_lib
[ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_Nrm_tendencies.F90.o
[ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_covariances.F90.o
[ 71%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_turbulent_sed.F90.o
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[ 71%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_swr.F.o
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[ 72%] Linking Fortran static library libKK_microphys_lib.a
[ 72%] Built target KK_microphys_lib
[ 72%] Linking Fortran static library libbugsrad_lib.a
Scanning dependencies of target silhs_lib
[ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/est_kessler_microphys_module.F90.o
[ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/mt95.F90.o
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[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/transform_to_pdf_module.F90.o
[ 74%] Built target bugsrad_lib
[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o
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[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/SILHS/silhs_importance_sample_module.F90:642:62:

  637 |       do category=1, num_importance_categories
      |                                              2                
......
  642 |                rand_vect(sample) <  category_cumulative_probs(category+1) ) then
      |                                                              1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o
[ 75%] Linking Fortran static library libmorrison_microphys_lib.a
[ 75%] Built target morrison_microphys_lib
/home/jenkins/workspace/clubb_timestep/src/SILHS/latin_hypercube_driver_module.F90:1597:10:

 1597 |       if ( X_u_chi(sample) < (one - cloud_frac_i) ) then
      |          ^
Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/SILHS/latin_hypercube_driver_module.F90:1579:18:

 1579 |       cloud_frac_i
      |                  ^
note: 'cloud_frac_i' was declared here
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o
[ 75%] Linking Fortran static library libsilhs_lib.a
[ 75%] Built target silhs_lib
Scanning dependencies of target numerical_recipes_lib
Scanning dependencies of target radiation_lib
[ 75%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o
[ 75%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o
[ 75%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o
[ 76%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o
Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:161:7:

  161 |       u,       & ! u wind sounding                        [m/s]
      |       1
Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:163:8:

  163 |       ug,      & ! u geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:162:7:

  162 |       v,       & ! v wind sounding                        [m/s]
      |       1
Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:164:8:

  164 |       vg,      & ! v geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:158:7:

  158 |       z,       & ! Altitude                               [m]
      |       1
Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
[825/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
[826/923] Linking Fortran static library src/Input_fields/libinput_fields_lib.a
[827/923] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd
[828/923] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd
[829/923] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd
[830/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o
[831/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o
[832/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o
[833/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o
[834/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o
[835/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o
[836/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o
[837/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o
[838/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o
[839/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o
[840/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o
[841/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/Microphys/ice_dfsn_module.F90:282:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  282 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) + dmass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_timestep/src/Microphys/ice_dfsn_module.F90:296:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  296 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[842/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o
[843/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o
[844/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o
[845/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o
[846/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o
[847/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o
[848/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o
[849/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o
[850/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o
[851/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o
[852/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o
[853/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o
[854/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:407:27:

[ 76%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o
[ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o
[ 78%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
[ 78%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o
[ 79%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o
[ 79%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o
/home/jenkins/workspace/clubb_timestep/src/Numerical_recipes/ran_state.f90:8:59:

    8 |   INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1
      |                                                           1
Warning: Integer outside symmetric range implied by Standard Fortran at (1)
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[ 80%] Linking Fortran static library libnumerical_recipes_lib.a
[ 80%] Built target numerical_recipes_lib
[ 80%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[ 80%] Linking Fortran static library libradiation_lib.a
[ 80%] Built target radiation_lib
Scanning dependencies of target input_fields_lib
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1470:21:

 1470 |    if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1
      |                     1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1492:18:

 1492 |       if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1
      |                  1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1038:15:

 1038 |             if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1040:15:

 1040 |             if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1042:15:

 1042 |             if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1045:15:

 1045 |             if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1047:15:

 1047 |             if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1049:15:

 1049 |             if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:356:13:

  356 |      if( ANY(Ts_in == 0.0) ) then
      |             1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:620:12:

  620 |          if(T_in(i,nlev+1)/=missing_value) then
      |            1
Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:636:12:

  636 |          if(T_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:638:12:

  638 |          if(q_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:640:12:

  640 |          if(u_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:642:12:

  642 |          if(v_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:647:15:

  647 |             if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:651:15:

  651 |             if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:658:12:

  658 |          if(ug_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:660:12:

  660 |          if(vg_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1252:42:

 1252 |   character     dim_name*( NF90_MAX_NAME )
      |                                          1
Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1254:33:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                 1
Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1254:43:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                           1
Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1254:46:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                              1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1237:60:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                            1
Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1237:54:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                      1
Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1238:23:

 1238 |      var, use_NF90_REAL, status, required)
      |                       1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:1167:67:

 1167 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, &
      |                                                                   1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:751:51:

  751 |                                get_add_surface_data, ntime, &
      |                                                   1
Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:750:81:

  750 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, &
      |                                                                                 1
Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:290:32:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                1
Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:290:38:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                      1
Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable]
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:291:19:

  291 |    integer :: varID, NCID
      |                   1
Warning: Unused variable 'varid' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o
[ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[ 82%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:788:31:

  788 |    tausrf_in(:) = missing_value
      |                               ^
Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_core/readiopdata_core_module.F90:761:59:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                                           ^
note: 'tausrf_in.dim[0].ubound' was declared here
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:260:16:

  260 |     integer :: k
      |                1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:264:17:

  264 |       qtm_forcing  ! Specified total water spec. humidity tendency    [kg/kg/s]
      |                 1
Warning: Unused variable 'qtm_forcing' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:243:31:

  243 | subroutine readiopdata_frc( rtm, gr, thlm_forcing, rtm_forcing )
      |                               1
Warning: Unused dummy argument 'rtm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:285:47:

  285 |     thlm_forcing(1:nlevels) = dtls(1:nlevels,1)
      |                                               ^
Warning: 'nlevels' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/readiopdata_module.F90:258:22:

  258 |     integer :: nlevels
      |                      ^
note: 'nlevels' was declared here
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'kappa' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:57:8:

   57 |     use input_names, only: &
      |        1
Warning: Unused parameter 'omega_name' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'p0' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:165:13:

  165 |       p_in_Pa, & ! Pressure                               [Pa]
      |             1
Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:160:8:

  160 |       rt,      & ! Total water mixing ratio sounding      [kg/kg]
      |        1
Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:166:10:

  166 |       subs       ! Vertical velocity sounding             [m/s or Pa/s]
      |          1
Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:159:11:

  159 |       theta,   & ! Liquid potential temperature sounding  [K]
      |           1
Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:161:7:

  161 |       u,       & ! u wind sounding                        [m/s]
      |       1
Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:163:8:

  163 |       ug,      & ! u geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:162:7:

  162 |       v,       & ! v wind sounding                        [m/s]
      |       1
Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:164:8:

  164 |       vg,      & ! v geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_timestep/src/Input_fields/sounding.F90:158:7:

  158 |       z,       & ! Altitude                               [m]
      |       1
Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
[ 83%] Linking Fortran static library libinput_fields_lib.a
[ 83%] Built target input_fields_lib
Scanning dependencies of target microphys_lib
Scanning dependencies of target benchmark_cases_lib
Scanning dependencies of target G_unit_test_lib
[ 83%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o
[ 83%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o
[ 84%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o
[ 84%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o
[ 84%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o
[ 84%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o
/home/jenkins/workspace/clubb_timestep/src/Microphys/ice_dfsn_module.F90:282:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  282 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) + dmass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_timestep/src/Microphys/ice_dfsn_module.F90:296:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  296 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[ 84%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o
[ 85%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o
[ 85%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:407:27:

  407 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:406:22:

  406 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:462:22:

  462 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:221:27:

  221 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:220:22:

  220 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:275:22:

  275 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o
[ 86%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o
[ 86%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o
[ 87%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o
[ 87%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o
[ 88%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o
[ 88%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o
[ 89%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o
[ 89%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[ 89%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[ 89%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o
[ 90%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o
[ 91%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/mu_sigma_hm_tests.F90:511:17:

  511 |              if ( any( .not. l_pass_test_3 ) ) then
      |                 ^
Warning: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/mu_sigma_hm_tests.F90:137:19:

  137 |       l_pass_test_3, & ! Flag for passing test 3
      |                   ^
note: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' was declared here
[ 91%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o
[ 91%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o
[ 91%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o
[ 92%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
  407 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:406:22:

  406 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:462:22:

  462 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:221:27:

  221 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:220:22:

  220 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/fill_holes_tests.F90:275:22:

  275 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[855/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o
[856/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
[857/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/mu_sigma_hm_tests.F90:511:17:

  511 |              if ( any( .not. l_pass_test_3 ) ) then
      |                 ^
Warning: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_timestep/src/G_unit_test_types/mu_sigma_hm_tests.F90:137:19:

  137 |       l_pass_test_3, & ! Flag for passing test 3
      |                   ^
note: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' was declared here
[858/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[859/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o
[860/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o
[861/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o
[862/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o
[863/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o
[864/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o
[865/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o
[866/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o
[867/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o
[868/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o
[869/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o
[870/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[871/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o
[872/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o
[873/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o
[874/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o
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   22 |                           gr, rtm, l_readiopdata, &
      |                                                1
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[884/923] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a
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[890/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o
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[897/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd
[898/923] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o
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/home/jenkins/workspace/clubb_timestep/src/clubb_driver.F90:5539:76:

 5539 |                                           p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, &
      |                                                                            1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver.F90:255:28:

  255 |     is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) )
      |                            1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:273:14:

  273 |     if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then
      |              1
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  278 |     if ( any( test_correlation /= reference_correlation ) ) then
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:283:14:

  283 |     if ( any( test_std_ratio /= reference_std_ratio ) ) then
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:288:14:

  288 |     if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:293:14:

  293 |     if ( any( test_bias_norm /= reference_bias_norm ) ) then
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:512:14:

  512 |     if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:521:14:

  521 |          any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:520:14:

  520 |          any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. &
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:519:14:

  519 |          any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. &
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:518:14:

  518 |          any( reinit_correlation_1 /= reinit_correlation_2 ) .or. &
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:517:14:

  517 |     if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. &
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:431:14:

  431 |     if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:371:14:

  371 |          any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:370:14:

  370 |          any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. &
      |              1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:369:14:

  369 |          any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:368:14:

  368 |          any( manual_correlation_2 /= manual_correlation_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:367:14:

  367 |     if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. &
      |              1
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[922/923] Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_thread_test
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-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone
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-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone_loss
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_loss_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
CLUBBStandardsCheck.py: beginning check on src
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CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types

Build completed successfully, and all source code checks passed.
[Pipeline] catchError
[Pipeline] {
[Pipeline] sh
+ python tests/run_clubb_conv_test.py
Installing uv 0.11.32 in /home/jenkins/workspace/clubb_timestep/.clubb-python-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_timestep/.clubb-python-tools/bin
  uv
  uvx
everything's installed!
Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_timestep/.venv-python
Downloading cpython-3.12.13-linux-x86_64-gnu (download) (32.6MiB)
 Downloaded cpython-3.12.13-linux-x86_64-gnu (download)
Using CPython 3.12.13
Creating virtual environment at: .venv-python
Activate with: source .venv-python/bin/activate
Installing python requirements into /home/jenkins/workspace/clubb_timestep/.venv-python
Using Python 3.12.13 environment at: .venv-python
Resolved 12 packages in 248ms
Downloading meson (1.1MiB)
Downloading numpy (15.9MiB)
Downloading pygments (1.2MiB)
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[ 92%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o
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   22 |                           gr, rtm, l_readiopdata, &
      |                                                1
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 5539 |                                           p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, &
      |                                                                            1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver.F90:255:28:

  255 |     is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) )
      |                            1
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/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:273:14:

  273 |     if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then
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  278 |     if ( any( test_correlation /= reference_correlation ) ) then
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  283 |     if ( any( test_std_ratio /= reference_std_ratio ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:288:14:

  288 |     if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:293:14:

  293 |     if ( any( test_bias_norm /= reference_bias_norm ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:512:14:

  512 |     if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:521:14:

  521 |          any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:520:14:

  520 |          any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:519:14:

  519 |          any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:518:14:

  518 |          any( reinit_correlation_1 /= reinit_correlation_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:517:14:

  517 |     if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. &
      |              1
 Downloaded netcdf4
 Downloaded meson
 Downloaded pygments
 Downloaded numpy
Prepared 12 packages in 970ms
Installed 12 packages in 35ms
 + certifi==2026.7.22
 + cftime==1.6.6
 + iniconfig==2.3.0
 + meson==1.12.1
 + netcdf4==1.7.4
 + ninja==1.13.2
 + numpy==2.5.3
 + packaging==26.3
 + pluggy==1.6.0
 + pygments==2.21.0
 + pytest==9.1.1
 + tabulate==0.10.0
Ready: /home/jenkins/workspace/clubb_timestep/.venv-python/bin/python
Creating initial bomex 90-min run... Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:431:14:

  431 |     if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then
      |              1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:371:14:

  371 |          any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:370:14:

  370 |          any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:369:14:

  369 |          any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:368:14:

  368 |          any( manual_correlation_2 /= manual_correlation_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_timestep/src/clubb_loss_driver_test.F90:367:14:

  367 |     if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[100%] Linking Fortran executable clubb_driver_test
[100%] Linking Fortran executable clubb_thread_test
[100%] Linking Fortran executable clubb_standalone
[100%] Built target clubb_thread_test
[100%] Linking Fortran executable clubb_standalone_loss
[100%] Built target clubb_standalone
[100%] Built target clubb_driver_test
[100%] Built target clubb_standalone_loss
[100%] Linking Fortran executable clubb_loss_driver_test
[100%] Built target clubb_loss_driver_test
[100%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o
[100%] Linking Fortran executable clubb_tuner
[100%] Built target clubb_tuner
Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone_loss
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
-- Installing: /home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_loss_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_timestep/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-rr4amopxiouymfpd5tw5ducrmg4u7a6i/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types

Build completed successfully, and all source code checks passed.
[Pipeline] catchError
[Pipeline] {
[Pipeline] sh
+ tests/run_timestep_tests.py
Done!
Restarting bomex with time step 1 seconds... Done!
Restarting bomex with time step 2 seconds... Done!
Restarting bomex with time step 4 seconds... Done!
Restarting bomex with time step 8 seconds... Done!
Restarting bomex with time step 16 seconds... Done!
Restarting bomex with time step 30 seconds... Done!
Restarting bomex with time step 60 seconds... Done!
Restarting bomex with time step 120 seconds... Done!
Restarting bomex with time step 240 seconds... Done!
Generating plot...
first 4 points: slope = 0.4803415837907895, R^2 = 0.7300075394901495
all 8 points: slope = 0.663291502338725, R^2 = 0.8567751816691499
CLUBB failed to converge!
[Pipeline] }
ERROR: script returned exit code 1
Setting overall build result to FAILURE
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
---------------- Running arm ----------------
--- PASS up to dt = 3600
---------------- Running arm_97 ----------------
--- PASS up to dt = 3600
---------------- Running astex_a209 ----------------
--- PASS up to dt = 3600
---------------- Running atex ----------------
--- PASS up to dt = 3600
---------------- Running bomex ----------------
--- PASS up to dt = 3600
---------------- Running cgils_s6 ----------------
--- PASS up to dt = 3600
---------------- Running cgils_s11 ----------------
--- PASS up to dt = 3600
---------------- Running cgils_s12 ----------------
--- PASS up to dt = 3600
---------------- Running clex9_nov02 ----------------
--- PASS up to dt = 3600
---------------- Running clex9_oct14 ----------------
--- PASS up to dt = 3600
---------------- Running dycoms2_rf01 ----------------
--- PASS up to dt = 3600
---------------- Running dycoms2_rf01_fixed_sst ----------------
--- PASS up to dt = 3600
---------------- Running dycoms2_rf02_do ----------------
--- PASS up to dt = 3600
---------------- Running dycoms2_rf02_ds ----------------
--- PASS up to dt = 3600
---------------- Running dycoms2_rf02_nd ----------------
--- PASS up to dt = 3600
---------------- Running dycoms2_rf02_so ----------------
--- PASS up to dt = 3600
---------------- Running fire ----------------
--- PASS up to dt = 3600
---------------- Running gabls2 ----------------
--- PASS up to dt = 3600
---------------- Running gabls3 ----------------
---- FAIL @ dt = 1800
---------------- Running gabls3_night ----------------
--- PASS up to dt = 3600
---------------- Running jun25_altocu ----------------
--- PASS up to dt = 3600
---------------- Running lba ----------------
--- PASS up to dt = 3600
---------------- Running mc3e ----------------
---- FAIL @ dt = 3000
---------------- Running mpace_a ----------------
--- PASS up to dt = 3600
---------------- Running mpace_b ----------------
--- PASS up to dt = 3600
---------------- Running mpace_b_silhs ----------------
--- PASS up to dt = 3600
---------------- Running nov11_altocu ----------------
--- PASS up to dt = 3600
---------------- Running rico ----------------
--- PASS up to dt = 3600
---------------- Running rico_silhs ----------------
--- PASS up to dt = 3600
---------------- Running twp_ice ----------------
--- PASS up to dt = 3600
---------------- Running wangara ----------------
--- PASS up to dt = 3600
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] script
[Pipeline] {
[Pipeline] emailext
Sending email to: messnermet@uwm.edu
[Pipeline] }
[Pipeline] // script
[Pipeline] }
[Pipeline] // stage
[Pipeline] End of Pipeline
Finished: FAILURE