Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop21-skylake_avx512/gcc-12.2.0/lmod-8.7.37-3552rvkhu4qfxfzyzb7zxriff2fncj6e
++ LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop21-skylake_avx512/gcc-12.2.0/lmod-8.7.37-3552rvkhu4qfxfzyzb7zxriff2fncj6e
++ source /usr/local/spack/opt/spack/linux-pop21-skylake_avx512/gcc-12.2.0/lmod-8.7.37-3552rvkhu4qfxfzyzb7zxriff2fncj6e/lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop21-skylake_avx512/gcc-12.2.0/lmod-8.7.37-3552rvkhu4qfxfzyzb7zxriff2fncj6e/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop21-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop21-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-eheq3uy (required by: yaksa/0.3-wonkz2d, mpich/4.2.1,
hdf5/1.14.3-olhmthk, netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.33-3y65nib
(required by: yaksa/0.3-wonkz2d, mpich/4.2.1, hdf5/1.14.3-olhmthk,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ compile/compile.bash -c config/linux_x86_64_gfortran.bash
config/linux_x86_64_gfortran.bash: line 54: nf-config: command not found
......................................................................................................................................................................... Make.clubb_lapack is ready.
.................................................................................. Make.clubb_param is ready.
......................... Make.clubb_bugsrad is ready.
... Make.microphys_utils is ready.
..... Make.clubb_parabolic is ready.
.............. Make.clubb_KK_microphys is ready.
................................................. Make.clubb_coamps is ready.
... Make.clubb_morrison is ready.
... Make.clubb_gfdlact is ready.
............. Make.silhs is ready.
.................................................................. Make.clubb_other is ready.
... Make.clubb_standalone is ready.
... Make.clubb_thread_test is ready.
............ Make.clubb_tuner is ready.
... Make.jacobian is ready.
................ Make.G_unit_tests is ready.
... Make.int2txt is ready.
cd /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../obj; make -f Make.clubb_param
cd /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../obj; make -f Make.clubb_gfdlact
make[1]: Entering directory '/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/obj'
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/SCM_Activation/aer_ccn_act_k.F90
make[1]: Entering directory '/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/obj'
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/clubb_precision.F90
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/parameter_indices.F90
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/error_code.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/model_flags.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/code_timer_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/lapack_interfaces.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/parameters_model.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/endian.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/penta_lu_solver.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/input_names.F90
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/penta_lu_solver.F90:131:22:
131 | integer :: i, k, j ! Loop variables
| 1
Warning: Unused variable 'j' declared at (1) [-Wunused-variable]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/array_index.F90
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/mt95.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/tridiag_lu_solver.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/constants_clubb.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stat_file_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_variables.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
ar rv /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../lib/libclubb_gfdlact.a aer_ccn_act_k.o
ar: creating /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../lib/libclubb_gfdlact.a
a - aer_ccn_act_k.o
make[1]: Leaving directory '/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/obj'
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/calc_roots.F90
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/file_functions.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/interpolation.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/new_tsdadg_pdf.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_operations.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/pdf_parameter_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/T_in_K_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/new_hybrid_pdf.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/saturation.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/saturation.F90:1378:10:
1378 | rsat
| 1
Warning: Unused variable 'rsat' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/saturation.F90:854:8:
854 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'ep' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/saturation.F90:882:16:
882 | integer :: i, k ! Loop indices
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/saturation.F90:882:19:
882 | integer :: i, k ! Loop indices
| 1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/new_pdf.F90
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/saturation.F90:1078:32:
1078 | subroutine sat_vapor_press_ice( nz, ngrdcol, T_in_K, saturation_formula, &
| ^
Warning: 'sat_vapor_press_ice' defined but not used [-Wunused-function]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/LY93_pdf.F90
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/pdf_utilities.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/lapack_wrap.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/lapack_wrap.F90:239:16:
239 | subd, diag, supd
| 1
Warning: Unused variable 'diag' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/lapack_wrap.F90:239:10:
239 | subd, diag, supd
| 1
Warning: Unused variable 'subd' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/lapack_wrap.F90:239:22:
239 | subd, diag, supd
| 1
Warning: Unused variable 'supd' declared at (1) [-Wunused-variable]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/diagnose_correlations_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/input_reader.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/clip_semi_implicit.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/calendar.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/sigma_sqd_w_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/hydromet_pdf_parameter_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/Nc_Ncn_eqns.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c -I/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/output_grads.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_type.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:2307:8:
2307 | use clubb_precision, only: &
| 1
Warning: Unused parameter 'core_rknd' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1942:38:
1942 | real( kind = core_rknd ) :: factor
| 1
Warning: Unused variable 'factor' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1377:8:
1377 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'fstdout' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1373:8:
1373 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_cubic_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1373:8:
1373 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_quintic_poly_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1325:8:
1325 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'fstdout' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1321:8:
1321 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_cubic_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1321:8:
1321 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_quintic_poly_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1212:8:
1212 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'fstdout' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1208:8:
1208 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_cubic_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1208:8:
1208 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_quintic_poly_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1162:8:
1162 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'fstdout' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1158:8:
1158 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_cubic_interp' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1158:8:
1158 | use model_flags, only: &
| 1
Warning: Unused parameter 'l_quintic_poly_interp' which has been explicitly imported at (1) [-Wunused-parameter]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/corr_varnce_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_type_utilities.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:546:16:
546 | integer :: i
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:438:16:
438 | integer :: i
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:224:16:
224 | integer :: i
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:167:24:
167 | old_soln, & ! Intent(in)
| 1
Warning: Unused dummy argument 'old_soln' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:165:26:
165 | solve_name, penta_solve_method, & ! Intent(in)
| 1
Warning: Unused dummy argument 'solve_name' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:106:16:
106 | integer :: i
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:50:24:
50 | old_soln, & ! Intent(in)
| 1
Warning: Unused dummy argument 'old_soln' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/matrix_solver_wrapper.F90:48:26:
48 | solve_name, penta_solve_method, & ! Intent(in)
| 1
Warning: Unused dummy argument 'solve_name' at (1) [-Wunused-dummy-argument]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/precipitation_fraction.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_zm_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/index_mapping.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_zt_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_lh_zt_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_lh_sfc_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_rad_zt_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_rad_zm_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/stats_sfc_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/mean_adv.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/diffusion.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_helper_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_helper_module.F90:1785:16:
1785 | integer :: i, k
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_helper_module.F90:1785:19:
1785 | integer :: i, k
| 1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_helper_module.F90:649:56:
649 | thlm, um, vm, em, Lscale, exner, rtm, &
| 1
Warning: Unused dummy argument 'em' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_helper_module.F90:377:8:
377 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'one_half' which has been explicitly imported at (1) [-Wunused-parameter]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/adg1_adg2_3d_luhar_pdf.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/parameters_tunable.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/parameters_tunable.F90:2135:32:
2135 | subroutine init_parameters_999( &
| ^
Warning: 'init_parameters_999' defined but not used [-Wunused-function]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/sponge_layer_damping.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_xp3_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/mono_flux_limiter.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_xp3_module.F90:119:16:
119 | integer :: i, k, sclr ! Loop index
| 1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/advance_xp3_module.F90:119:19:
119 | integer :: i, k, sclr ! Loop index
| 1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/mono_flux_limiter.F90:1288:13:
1288 | k_tdiag = 2, & ! Thermodynamic main diagonal index.
| 1
Warning: Unused parameter 'k_tdiag' declared at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/mono_flux_limiter.F90:1289:15:
1289 | km1_tdiag = 3 ! Thermodynamic subdiagonal index.
| 1
Warning: Unused parameter 'km1_tdiag' declared at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/mono_flux_limiter.F90:1287:15:
1287 | kp1_tdiag = 1, & ! Thermodynamic superdiagonal index.
| 1
Warning: Unused parameter 'kp1_tdiag' declared at (1) [-Wunused-parameter]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/turbulent_adv_pdf.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/pos_definite_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/fill_holes.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/fill_holes.F90:685:8:
685 | use constants_clubb, only: &
| 1
Warning: Unused parameter 'num_hf_draw_points' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/fill_holes.F90:660:41:
660 | rho_ds_zm, rho_ds_zt, exner, & ! Intent(in)
| 1
Warning: Unused dummy argument 'rho_ds_zm' at (1) [-Wunused-dummy-argument]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/calc_pressure.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/Skx_module.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
gfortran -DNETCDF -D__GFORTRAN__ -DCLUBB_REAL_TYPE=8 -DCOAMPS_MICRO -DNR_SP -DSILHS -Dradoffline -Dnooverlap -DCLUBB -I/include/ -march=native -msse3 -mfpmath=sse -fopenmp -g -fbounds-check -mieee-fp -ffpe-trap=invalid,zero,overflow -finit-real=nan -finit-integer=-99999 -finit-logical=false -fall-intrinsics -fbacktrace -O2 -Wall -Wextra -Wconversion -Wunderflow -Wcharacter-truncation -std=f2008 -pedantic -c /home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90
f951: Warning: Nonexistent include directory '/include/' [-Wmissing-include-dirs]
/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:42:9:
42 | use netcdf, only: &
| 1
Fatal Error: Cannot open module file 'netcdf.mod' for reading at (1): No such file or directory
compilation terminated.
make[1]: *** [Make.clubb_param:114: output_netcdf.o] Error 1
make[1]: *** Waiting for unfinished jobs....
make[1]: Leaving directory '/home/jenkins/workspace/clubb_restart_silhs_gfortran_test/obj'
make: *** [Makefile:14: libclubb_param.a] Error 2
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