Console Output

+ source /etc/profile.d/larson-group.sh
++ export PATH MANPATH LD_LIBRARY_PATH
++ export SVNROOT=http://carson.math.uwm.edu/repos
++ SVNROOT=http://carson.math.uwm.edu/repos
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z
++ LMOD_ROOT=/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z
++ source /usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib
++ export GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ GFORTRAN_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ export GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ GFORTRAN_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ export GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ GFORTRAN_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib
++ export IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ IFORT_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ export IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ IFORT_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ export IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ IFORT_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib
++ LD_LIBRARY_PATH=:/usr/local/NETCDF-Fortran-4.5.3-gfortran/lib:/usr/local/NETCDF-C-4.8.0-gfortran/lib:/usr/local/NETCDF-Fortran-4.5.3-ifort/lib:/usr/local/NETCDF-C-4.8.0-ifort/lib:/usr/local/NETCDF-Fortran-4.5.3-pgi/lib:/usr/local/NETCDF-C-4.8.0-pgi/lib
+++ uname -s
+++ uname -m
++ export NVARCH=Linux_x86_64
++ NVARCH=Linux_x86_64
++ export NVCOMPILERS=/opt/nvidia/hpc_sdk
++ NVCOMPILERS=/opt/nvidia/hpc_sdk
++ export MANPATH=:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man
++ MANPATH=:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/man
++ export CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
++ CUDADIR=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/cuda/
++ export PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ PGIFORTRAN_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ export PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ PGI_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ export PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ PGI_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ export PATH=/usr/lib/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ PATH=/usr/lib/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/opt/nvidia/hpc_sdk/Linux_x86_64/2024/compilers/bin
++ export GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ GNU_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-gfortran
++ export GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ GNU_NETCDF_C=/usr/local/NETCDF-C-4.8.0-gfortran
++ export GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ GNU_MPICH=/usr/local/mpi/MPICH-3.3.1-gfortran
++ export INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ INTEL_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-ifort
++ export INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ INTEL_NETCDF_C=/usr/local/NETCDF-C-4.8.0-ifort
++ export INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ INTEL_MPICH=/usr/local/mpi/MPICH-3.3.1-intel
++ export NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ NVHPC_MPICH=/opt/nvidia/hpc_sdk/Linux_x86_64/2024/comm_libs/openmpi/openmpi-3.1.5/
++ export NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ NVHPC_NETCDF_FORTRAN=/usr/local/NETCDF-Fortran-4.5.3-pgi
++ export NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
++ NVHPC_NETCDF_C=/usr/local/NETCDF-C-4.8.0-pgi
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl,
netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ run_scripts/run_restart_test.bash bomex
Running standard bomex case... Done!
Running restart bomex case from halfway point... Done!
Results bit-for-bit.