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[ 29%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssymv.f.o
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[ 29%] Building Fortran object src/Lapack/Lapack_single/CMakeFiles/clubb_lapack_single.dir/ssyr2.f.o
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[ 36%] Built target clubb_lapack_double
[ 37%] Linking Fortran static library liblapack_lib.a
[ 37%] Built target lapack_lib
[ 37%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/error_code.F90.o
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/endian.F90:167:53:

  167 |     call mvbits( i_element, 56, 8, i_element_br, 0  )
      |                                                     ^
Warning: 'i_element_br' is used uninitialized [-Wuninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/endian.F90:159:39:

  159 |     integer(kind=int64) :: i_element_br
      |                                       ^
note: 'i_element_br' declared here
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/endian.F90:123:53:

  123 |     CALL MVBITS( i_element, 24, 8, i_element_br, 0  )
      |                                                     ^
Warning: 'i_element_br' is used uninitialized [-Wuninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/endian.F90:117:69:

  117 |     INTEGER(KIND=int32)                               :: i_element_br
      |                                                                     ^
note: 'i_element_br' declared here
[ 41%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/Nc_Ncn_eqns.F90.o
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/penta_bicgstab_solver.F90:140:10:

  140 |       if ( norm_rhs == 0.0) then
      |          1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:1212:43:

 1212 |             if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then
      |                                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:1106:15:

 1106 |             if(dm(i) == zero) then
      |               1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/parameters_tunable.F90:1822:30:

 1822 |   subroutine unpack_parameters &
      |                              ^
Warning: 'unpack_parameters' defined but not used [-Wunused-function]
[ 45%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/calc_pressure.F90.o
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
      |                                                                       ^
Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:129:17:

  129 |       level_below, &        ! The altitude of the level or spline connection point below   [m]
      |                 ^
note: 'level_below' was declared here
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
[649/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sponge_layer_damping.F90.o
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[654/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/remapping_module.F90.o
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:1212:43:

 1212 |             if(f(i,k+1)*f(i,k-1)<zero .and. df2(i,k)/=zero) then
      |                                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:1106:15:

 1106 |             if(dm(i) == zero) then
      |               1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
      |                                                                       ^
Warning: 'level_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:129:17:

  129 |       level_below, &        ! The altitude of the level or spline connection point below   [m]
      |                 ^
note: 'level_below' was declared here
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:185:71:

  185 |                               *( val_below + lin_spline_rho_vals(l) )/2
      |                                                                       ^
Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:128:15:

  128 |       val_below, &          ! The rho value of the level or spline connection point below  [kg/m^3]
      |               ^
note: 'val_below' was declared here
[655/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/parameters_tunable.F90.o
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/parameters_tunable.F90:1822:30:

 1822 |   subroutine unpack_parameters &
      |                              ^
Warning: 'unpack_parameters' defined but not used [-Wunused-function]
[656/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/pdf_parameter_module.F90.o
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/mixing_length.F90:1096:16:

 1096 |             if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= &
      |                ^
Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/mixing_length.F90:730:42:

  730 |     real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1
      |                                          ^
note: 'dcape_dz_j' was declared here
[670/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_clubb_utilities.F90.o
[671/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_windm_edsclrm_module.F90.o
[672/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/grid_adaptation_module.F90.o
[673/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/setup_clubb_pdf_params.F90.o
[674/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_wp2_wp3_module.F90.o
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/advance_wp2_wp3_module.F90:1927:12:

 1927 |         if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then
      |            ^
Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20:

 1470 |       wp2_avg_before, &
      |                    ^
note: 'wp2_avg_before' was declared here
[675/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_xp2_xpyp_module.F90.o
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[678/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o
[679/923] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/clubb_api_module.F90.o
[680/923] Linking Fortran static library src/CLUBB_core/libclubb_core_lib.a
[681/923] Generating Fortran dyndep file src/CMakeFiles/text_writer_lib.dir/Fortran.dd
[682/923] Generating Fortran dyndep file src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/Fortran.dd
[683/923] Generating Fortran dyndep file src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/Fortran.dd
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[685/923] Generating Fortran dyndep file src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/Fortran.dd
[686/923] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/kinds.F90.o
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      |                                                                       ^
Warning: 'val_below' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/remapping_module.F90:128:15:

  128 |       val_below, &          ! The rho value of the level or spline connection point below  [kg/m^3]
      |               ^
note: 'val_below' was declared here
[ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/stats_netcdf.F90.o
[ 46%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/new_hybrid_pdf_main.F90.o
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/mixing_length.F90:1096:16:

 1096 |             if ( abs( dCAPE_dz_j - dCAPE_dz_j_minus_1 ) * 2 <= &
      |                ^
Warning: 'dcape_dz_j' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/mixing_length.F90:730:42:

  730 |     real( kind = core_rknd ) :: dCAPE_dz_j, dCAPE_dz_j_minus_1, dCAPE_dz_j_plus_1
      |                                          ^
note: 'dcape_dz_j' was declared here
[ 50%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/sfc_varnce_module.F90.o
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/home/jenkins/workspace/clubb_restart/src/CLUBB_core/advance_wp2_wp3_module.F90:1927:12:

 1927 |         if ( abs(wp2_avg_before - wp2_avg_after) > epsilon(wp2_avg_after)*1000 ) then
      |            ^
Warning: 'wp2_avg_before' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/CLUBB_core/advance_wp2_wp3_module.F90:1470:20:

 1470 |       wp2_avg_before, &
      |                    ^
note: 'wp2_avg_before' was declared here
[ 52%] Building Fortran object src/CLUBB_core/CMakeFiles/clubb_core_lib.dir/advance_clubb_core_module.F90.o
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[ 68%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/PDF_integrals_all_MM.F90.o
[ 69%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/nrmtqw.F.o
[ 69%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qsatvi.F.o
[ 69%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/qtadj.F.o
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[ 69%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqg.F.o
[ 70%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqi.F.o
[ 70%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqr.F.o
[ 70%] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/tgqs.F.o
[ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_means.F90.o
[ 70%] Linking Fortran static library libcoamps_lib.a
[ 70%] Built target coamps_lib
[ 70%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_swr.F.o
[ 70%] Building Fortran object src/Radiation/BUGSrad/CMakeFiles/bugsrad_lib.dir/bugs_lwr.F.o
[ 70%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_Nrm_tendencies.F90.o
[ 71%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_turbulent_sed.F90.o
[ 71%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_covariances.F90.o
[ 71%] Building Fortran object src/Microphys/KK_microphys/CMakeFiles/KK_microphys_lib.dir/KK_upscaled_variances.F90.o
[ 72%] Linking Fortran static library libKK_microphys_lib.a
[ 72%] Linking Fortran static library libbugsrad_lib.a
[ 72%] Built target KK_microphys_lib
[ 72%] Built target bugsrad_lib
[ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/transform_to_pdf_module.F90.o
[ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_arrays.F90.o
[ 73%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/parameters_silhs.F90.o
[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/est_kessler_microphys_module.F90.o
[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/mt95.F90.o
[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o
[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o
[ 74%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o
/home/jenkins/workspace/clubb_restart/src/SILHS/silhs_importance_sample_module.F90:642:62:

  637 |       do category=1, num_importance_categories
      |                                              2                
......
  642 |                rand_vect(sample) <  category_cumulative_probs(category+1) ) then
      |                                                              1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o
[ 75%] Linking Fortran static library libmorrison_microphys_lib.a
[ 75%] Built target morrison_microphys_lib
/home/jenkins/workspace/clubb_restart/src/SILHS/latin_hypercube_driver_module.F90:1638:10:

 1638 |       if ( X_u_chi(sample) < (one - cloud_frac_i) ) then
      |          ^
Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/SILHS/latin_hypercube_driver_module.F90:1620:18:

 1620 |       cloud_frac_i
      |                  ^
note: 'cloud_frac_i' was declared here
[ 75%] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o
[ 75%] Linking Fortran static library libsilhs_lib.a
[ 75%] Built target silhs_lib
[ 76%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o
[ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o
[ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o
[ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o
[ 77%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o
[ 77%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o
[ 78%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
[ 79%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o
[ 79%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o
[ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
[ 79%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o
/home/jenkins/workspace/clubb_restart/src/Numerical_recipes/ran_state.f90:8:59:

    8 |   INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1
      |                                                           1
Warning: Integer outside symmetric range implied by Standard Fortran at (1)
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[ 80%] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[ 80%] Linking Fortran static library libnumerical_recipes_lib.a
[ 80%] Built target numerical_recipes_lib
[ 80%] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[ 80%] Linking Fortran static library libradiation_lib.a
[ 80%] Built target radiation_lib
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1470:21:

 1470 |    if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1
      |                     1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1492:18:

 1492 |       if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1
      |                  1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1038:15:

 1038 |             if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1040:15:

 1040 |             if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1042:15:

 1042 |             if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1045:15:

 1045 |             if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1047:15:

 1047 |             if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1049:15:

 1049 |             if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:356:13:

  356 |      if( ANY(Ts_in == 0.0) ) then
      |             1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:620:12:

  620 |          if(T_in(i,nlev+1)/=missing_value) then
      |            1
Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:636:12:

  636 |          if(T_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:638:12:

  638 |          if(q_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:640:12:

  640 |          if(u_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:642:12:

  642 |          if(v_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:647:15:

  647 |             if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:651:15:

  651 |             if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:658:12:

  658 |          if(ug_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:660:12:

  660 |          if(vg_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1252:42:

 1252 |   character     dim_name*( NF90_MAX_NAME )
      |                                          1
Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1254:33:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                 1
Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1254:43:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                           1
Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1254:46:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                              1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1237:60:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                            1
Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1237:54:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                      1
Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1238:23:

 1238 |      var, use_NF90_REAL, status, required)
      |                       1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1167:67:

 1167 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, &
      |                                                                   1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:751:51:

  751 |                                get_add_surface_data, ntime, &
      |                                                   1
Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:750:81:

  750 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, &
      |                                                                                 1
Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:290:32:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                1
Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:290:38:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                      1
Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:291:19:

  291 |    integer :: varID, NCID
      |                   1
Warning: Unused variable 'varid' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/Input_fields/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[ 80%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o
[ 81%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[ 82%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[ 82%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:788:31:

  788 |    tausrf_in(:) = missing_value
      |                               ^
Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:59:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                                           ^
note: 'tausrf_in.dim[0].ubound' was declared here
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:260:16:

  260 |     integer :: k
      |                1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:264:17:

  264 |       qtm_forcing  ! Specified total water spec. humidity tendency    [kg/kg/s]
      |                 1
Warning: Unused variable 'qtm_forcing' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:243:31:

  243 | subroutine readiopdata_frc( rtm, gr, thlm_forcing, rtm_forcing )
      |                               1
Warning: Unused dummy argument 'rtm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:285:47:

  285 |     thlm_forcing(1:nlevels) = dtls(1:nlevels,1)
      |                                               ^
Warning: 'nlevels' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:258:22:

  258 |     integer :: nlevels
      |                      ^
note: 'nlevels' was declared here
[ 83%] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'kappa' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:57:8:

   57 |     use input_names, only: &
      |        1
Warning: Unused parameter 'omega_name' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'p0' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:165:13:

  165 |       p_in_Pa, & ! Pressure                               [Pa]
      |             1
Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:160:8:

  160 |       rt,      & ! Total water mixing ratio sounding      [kg/kg]
      |        1
Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:166:10:

  166 |       subs       ! Vertical velocity sounding             [m/s or Pa/s]
      |          1
Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:159:11:

  159 |       theta,   & ! Liquid potential temperature sounding  [K]
      |           1
Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:161:7:

  161 |       u,       & ! u wind sounding                        [m/s]
      |       1
Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:163:8:

  163 |       ug,      & ! u geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:162:7:

  162 |       v,       & ! v wind sounding                        [m/s]
      |       1
Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:164:8:

  164 |       vg,      & ! v geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:158:7:

  158 |       z,       & ! Altitude                               [m]
      |       1
Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
[ 83%] Linking Fortran static library libinput_fields_lib.a
[ 83%] Built target input_fields_lib
[ 84%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o
[ 84%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o
[ 85%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o
[ 85%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o
[ 85%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o
/home/jenkins/workspace/clubb_restart/src/Microphys/ice_dfsn_module.F90:282:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  282 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) + dmass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_restart/src/Microphys/ice_dfsn_module.F90:296:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  296 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[ 85%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:407:27:

  407 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:406:22:

  406 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:462:22:

  462 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:221:27:

  221 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:220:22:

  220 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:275:22:

  275 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[ 86%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o
[ 86%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o
[ 86%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o
[ 86%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o
[ 86%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o
[ 86%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o
[ 86%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o
[ 87%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o
[ 88%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o
[ 88%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o
[ 88%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o
[ 88%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o
[ 89%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o
[ 89%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o
[ 89%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o
[ 90%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o
[ 90%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[ 91%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/mu_sigma_hm_tests.F90:511:17:

  511 |              if ( any( .not. l_pass_test_3 ) ) then
      |                 ^
Warning: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/mu_sigma_hm_tests.F90:137:19:

  137 |       l_pass_test_3, & ! Flag for passing test 3
      |                   ^
note: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' was declared here
[ 91%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o
[ 91%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o
[ 91%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[ 91%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o
[ 91%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o
[ 92%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
[ 92%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o
[ 93%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o
[ 93%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o
[ 94%] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o
[ 94%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o
/home/jenkins/workspace/clubb_restart/src/Benchmark_cases/bomex.F90:22:48:

   22 |                           gr, rtm, l_readiopdata, &
      |                                                1
Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument]
[780/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/generate_uniform_sample_module.F90.o
[781/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/math_utilities.F90.o
[782/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o
[783/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o
/home/jenkins/workspace/clubb_restart/src/SILHS/silhs_importance_sample_module.F90:642:62:

  637 |       do category=1, num_importance_categories
      |                                              2                
......
  642 |                rand_vect(sample) <  category_cumulative_probs(category+1) ) then
      |                                                              1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
[784/923] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o
[785/923] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a
[786/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o
/home/jenkins/workspace/clubb_restart/src/SILHS/latin_hypercube_driver_module.F90:1638:10:

 1638 |       if ( X_u_chi(sample) < (one - cloud_frac_i) ) then
      |          ^
Warning: 'cloud_frac_i' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/SILHS/latin_hypercube_driver_module.F90:1620:18:

 1620 |       cloud_frac_i
      |                  ^
note: 'cloud_frac_i' was declared here
[787/923] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o
[788/923] Linking Fortran static library src/SILHS/libsilhs_lib.a
[789/923] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd
[790/923] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd
[791/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o
[792/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o
[793/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o
[794/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o
[795/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o
[796/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o
[797/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o
[798/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o
[799/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o
[800/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o
[801/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o
[802/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o
[803/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o
[804/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o
[805/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o
/home/jenkins/workspace/clubb_restart/src/Numerical_recipes/ran_state.f90:8:59:

    8 |   INTEGER(K4B), PARAMETER :: hg=huge(1_K4B), hgm=-hg, hgng=hgm-1
      |                                                           1
Warning: Integer outside symmetric range implied by Standard Fortran at (1)
[806/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o
[807/923] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o
[808/923] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a
[809/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o
[810/923] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o
[811/923] Linking Fortran static library src/Radiation/libradiation_lib.a
[812/923] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd
[813/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o
[814/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o
[815/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o
[816/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o
[817/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o
[818/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o
/home/jenkins/workspace/clubb_restart/src/Input_fields/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[819/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o
[820/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o
[821/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o
[822/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_core/readiopdata_core_module.F90.o
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1470:21:

 1470 |    if( (bmnth>2).and. isLeapYear(byear) ) jday = jday + 1
      |                     1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1492:18:

 1492 |       if(i==2.and.isLeapYear(iyear)) days_this_month = days_this_month + 1
      |                  1
Warning: Impure function 'isleapyear' at (1) might not be evaluated [-Wfunction-elimination]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1038:15:

 1038 |             if(divT_in(i,nlev+1)==missing_value) divT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1040:15:

 1040 |             if(vertdivT_in(i,nlev+1)==missing_value) vertdivT_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1042:15:

 1042 |             if(divT3d_in(i,nlev+1)==missing_value) divT3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1045:15:

 1045 |             if(divq_in(i,nlev+1)==missing_value) divq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1047:15:

 1047 |             if(vertdivq_in(i,nlev+1)==missing_value) vertdivq_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1049:15:

 1049 |             if(divq3d_in(i,nlev+1)==missing_value) divq3d_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:356:13:

  356 |      if( ANY(Ts_in == 0.0) ) then
      |             1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:620:12:

  620 |          if(T_in(i,nlev+1)/=missing_value) then
      |            1
Warning: Inequality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:636:12:

  636 |          if(T_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:638:12:

  638 |          if(q_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:640:12:

  640 |          if(u_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:642:12:

  642 |          if(v_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:647:15:

  647 |             if(omega_in(i,nlev+1)==missing_value) omega_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:651:15:

  651 |             if(w_in(i,nlev+1)==missing_value) w_in(i,nlev+1) = &
      |               1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:658:12:

  658 |          if(ug_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:660:12:

  660 |          if(vg_in(i,nlev+1)==missing_value) &
      |            1
Warning: Equality comparison for REAL(4) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1252:42:

 1252 |   character     dim_name*( NF90_MAX_NAME )
      |                                          1
Warning: Unused variable 'dim_name' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1254:33:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                 1
Warning: Unused variable 'dim_size' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1254:43:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                           1
Warning: Unused variable 'dims_set' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1254:46:

 1254 |   integer     var_ndims, dim_size, dims_set, i, n, var_type
      |                                              1
Warning: Unused variable 'i' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1237:60:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                            1
Warning: Unused dummy argument 'nlev' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1237:54:

 1237 | subroutine get_netcdf_var2d_real( NCID, varName, ntime, nlev, &
      |                                                      1
Warning: Unused dummy argument 'ntime' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1238:23:

 1238 |      var, use_NF90_REAL, status, required)
      |                       1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:1167:67:

 1167 | subroutine get_netcdf_var1d_real( NCID, varName, var, use_NF90_REAL, &
      |                                                                   1
Warning: Unused dummy argument 'use_nf90_real' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:751:51:

  751 |                                get_add_surface_data, ntime, &
      |                                                   1
Warning: Unused dummy argument 'get_add_surface_data' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:750:81:

  750 | subroutine readiopdata_core_sfc( masterproc, iopfilepath, scamiop_from_global_cam, SFC_FLX_FXD, &
      |                                                                                 1
Warning: Unused dummy argument 'scamiop_from_global_cam' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:290:32:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                1
Warning: Unused variable 'nlat' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:290:38:

  290 |    integer :: STATUS, i, n, nlat, nlon
      |                                      1
Warning: Unused variable 'nlon' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:291:19:

  291 |    integer :: varID, NCID
      |                   1
Warning: Unused variable 'varid' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:786:28:

  786 |    shf_in(:) = missing_value
      |                            ^
Warning: 'shf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:34:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                  ^
note: 'shf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.offset' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].lbound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:787:28:

  787 |    lhf_in(:) = missing_value
      |                            ^
Warning: 'lhf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:45:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                             ^
note: 'lhf_in' declared here
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:788:31:

  788 |    tausrf_in(:) = missing_value
      |                               ^
Warning: 'tausrf_in.dim[0].ubound' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_core/readiopdata_core_module.F90:761:59:

  761 |     real, allocatable :: shf_in(:), lhf_in(:), tausrf_in(:), tmp_srf(:), Tg_in(:)
      |                                                           ^
note: 'tausrf_in.dim[0].ubound' was declared here
[823/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/__/readiopdata_module.F90.o
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:260:16:

  260 |     integer :: k
      |                1
Warning: Unused variable 'k' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:264:17:

  264 |       qtm_forcing  ! Specified total water spec. humidity tendency    [kg/kg/s]
      |                 1
Warning: Unused variable 'qtm_forcing' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:243:31:

  243 | subroutine readiopdata_frc( rtm, gr, thlm_forcing, rtm_forcing )
      |                               1
Warning: Unused dummy argument 'rtm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:285:47:

  285 |     thlm_forcing(1:nlevels) = dtls(1:nlevels,1)
      |                                               ^
Warning: 'nlevels' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/readiopdata_module.F90:258:22:

  258 |     integer :: nlevels
      |                      ^
note: 'nlevels' was declared here
[824/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'kappa' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:57:8:

   57 |     use input_names, only: &
      |        1
Warning: Unused parameter 'omega_name' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:39:8:

   39 |     use constants_clubb, only:  &
      |        1
Warning: Unused parameter 'p0' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:165:13:

  165 |       p_in_Pa, & ! Pressure                               [Pa]
      |             1
Warning: Array 'p_in_pa' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:160:8:

  160 |       rt,      & ! Total water mixing ratio sounding      [kg/kg]
      |        1
Warning: Array 'rt' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:166:10:

  166 |       subs       ! Vertical velocity sounding             [m/s or Pa/s]
      |          1
Warning: Array 'subs' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:159:11:

  159 |       theta,   & ! Liquid potential temperature sounding  [K]
      |           1
Warning: Array 'theta' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:161:7:

  161 |       u,       & ! u wind sounding                        [m/s]
      |       1
Warning: Array 'u' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:163:8:

  163 |       ug,      & ! u geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'ug' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:162:7:

  162 |       v,       & ! v wind sounding                        [m/s]
      |       1
Warning: Array 'v' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:164:8:

  164 |       vg,      & ! v geostrophic wind sounding            [m/s]
      |        1
Warning: Array 'vg' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
/home/jenkins/workspace/clubb_restart/src/Input_fields/sounding.F90:158:7:

  158 |       z,       & ! Altitude                               [m]
      |       1
Warning: Array 'z' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
[825/923] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o
[826/923] Linking Fortran static library src/Input_fields/libinput_fields_lib.a
[827/923] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd
[828/923] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd
[829/923] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd
[830/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o
[831/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o
[832/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o
[833/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o
[834/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o
[835/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o
/home/jenkins/workspace/clubb_restart/src/Microphys/ice_dfsn_module.F90:282:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  282 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k) + dmass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_restart/src/Microphys/ice_dfsn_module.F90:296:27:

  214 |     do k = gr%nzt, 1, -1
      |                        2   
......
  296 |           mass_ice_cryst(i,k-1) = mass_ice_cryst(i,k)
      |                           1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
[836/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o
[837/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o
[838/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o
[839/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o
[840/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o
[841/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o
[842/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o
[843/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o
[844/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o
[845/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o
[846/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o
[847/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o
[848/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o
[849/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o
[850/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o
[851/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o
[852/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o
[853/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o
[854/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:407:27:

  407 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:406:22:

  406 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:462:22:

  462 |             if ( any( field_rev_rev /= field ) ) then
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o
[ 95%] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o
[ 95%] Linking Fortran static library libbenchmark_cases_lib.a
[ 95%] Built target benchmark_cases_lib
[ 95%] Linking Fortran static library libG_unit_test_lib.a
[ 95%] Built target G_unit_test_lib
[ 95%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o
[ 95%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o
[ 96%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o
[ 96%] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o
[ 96%] Linking Fortran static library libmicrophys_lib.a
[ 96%] Built target microphys_lib
[ 96%] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o
[ 97%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o
[ 97%] Linking Fortran executable G_unit_tests
[ 97%] Built target G_unit_tests
[ 97%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o
/home/jenkins/workspace/clubb_restart/src/clubb_driver.F90:5539:76:

 5539 |                                           p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, &
      |                                                                            1
Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument]
[ 97%] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver.F90:255:28:

  255 |     is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) )
      |                            1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
[ 97%] Linking Fortran static library libclubb_driver_lib.a
[ 97%] Built target clubb_driver_lib
[ 98%] Building Fortran object src/CMakeFiles/clubb_standalone_loss.dir/clubb_standalone_loss.F90.o
[ 98%] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o
[ 99%] Building Fortran object src/CMakeFiles/clubb_loss_driver_test.dir/clubb_loss_driver_test.F90.o
[100%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o
[100%] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o
[100%] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:273:14:

  273 |     if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:278:14:

  278 |     if ( any( test_correlation /= reference_correlation ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:283:14:

  283 |     if ( any( test_std_ratio /= reference_std_ratio ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:288:14:

  288 |     if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:293:14:

  293 |     if ( any( test_bias_norm /= reference_bias_norm ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:512:14:

  512 |     if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:521:14:

  521 |          any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:520:14:

  520 |          any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:519:14:

  519 |          any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:518:14:

  518 |          any( reinit_correlation_1 /= reinit_correlation_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:517:14:

  517 |     if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:431:14:

  431 |     if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then
      |              1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:371:14:

  371 |          any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:370:14:

  370 |          any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:369:14:

  369 |          any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:368:14:

  368 |          any( manual_correlation_2 /= manual_correlation_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:367:14:

  367 |     if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[100%] Linking Fortran executable clubb_thread_test
[100%] Linking Fortran executable clubb_standalone
[100%] Linking Fortran executable clubb_driver_test
[100%] Linking Fortran executable clubb_standalone_loss
[100%] Built target clubb_thread_test
[100%] Built target clubb_driver_test
[100%] Built target clubb_standalone
[100%] Built target clubb_standalone_loss
[100%] Linking Fortran executable clubb_loss_driver_test
[100%] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o
[100%] Built target clubb_loss_driver_test
[100%] Linking Fortran executable clubb_tuner
[100%] Built target clubb_tuner
Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_tuner
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/G_unit_tests
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_thread_test
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_driver_test
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone_loss
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_loss_driver_test
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-13.1.0/netcdf-fortran-4.5.3-zcsi7k5jxdw7dz5ufpdkyk6ovim7ebwe/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types

Build completed successfully, and all source code checks passed.
[Pipeline] catchError
[Pipeline] {
[Pipeline] sh
+ python3 tests/run_restart_test.py rico_silhs
Installing uv 0.11.32 in /home/jenkins/workspace/clubb_restart/.clubb-python-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_restart/.clubb-python-tools/bin
  uv
  uvx
everything's installed!
Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_restart/.venv-python
Using CPython 3.12.3 interpreter at: /usr/bin/python3.12
Creating virtual environment at: .venv-python
Activate with: source .venv-python/bin/activate
Installing python requirements into /home/jenkins/workspace/clubb_restart/.venv-python
Using Python 3.12.3 environment at: .venv-python
Resolved 12 packages in 292ms
Downloading pygments (1.2MiB)
Downloading cftime (1.6MiB)
Downloading numpy (15.9MiB)
Downloading netcdf4 (9.7MiB)
Downloading meson (1.1MiB)
 Downloaded cftime
 Downloaded netcdf4
 Downloaded meson
 Downloaded pygments
 Downloaded numpy
Prepared 12 packages in 565ms
Installed 12 packages in 20ms
 + certifi==2026.7.22
 + cftime==1.6.6
 + iniconfig==2.3.0
 + meson==1.12.1
 + netcdf4==1.7.4
 + ninja==1.13.2
 + numpy==2.5.3
 + packaging==26.3
 + pluggy==1.6.0
 + pygments==2.21.0
 + pytest==9.1.1
 + tabulate==0.10.0
Ready: /home/jenkins/workspace/clubb_restart/.venv-python/bin/python
Running standard rico_silhs case... Done!
Running restart rico_silhs case from halfway point... Done!
Results bit-for-bit.
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:221:27:

  221 |                  .or. any( field(:,upper_hf_level:nz) /= field(:,upper_hf_level:nz) ) ) then
      |                           1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:220:22:

  220 |             if ( any( field(:,1:lower_hf_level) /= field(:,1:lower_hf_level) ) &
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/fill_holes_tests.F90:275:22:

  275 |             if ( any( field_rev_rev /= field ) ) then
      |                      1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
[855/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o
[856/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o
[857/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/mu_sigma_hm_tests.F90:511:17:

  511 |              if ( any( .not. l_pass_test_3 ) ) then
      |                 ^
Warning: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' may be used uninitialized [-Wmaybe-uninitialized]
/home/jenkins/workspace/clubb_restart/src/G_unit_test_types/mu_sigma_hm_tests.F90:137:19:

  137 |       l_pass_test_3, & ! Flag for passing test 3
      |                   ^
note: 'MEM[(logical(kind=4)[1] *)&l_pass_test_3]' was declared here
[858/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o
[859/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o
[860/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o
[861/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o
[862/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o
[863/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o
[864/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o
[865/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o
[866/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o
[867/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o
[868/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o
[869/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o
[870/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o
[871/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o
[872/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o
[873/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o
[874/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o
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[876/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o
/home/jenkins/workspace/clubb_restart/src/Benchmark_cases/bomex.F90:22:48:

   22 |                           gr, rtm, l_readiopdata, &
      |                                                1
Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument]
[877/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o
[878/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o
[879/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o
[880/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o
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[882/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o
[883/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o
[884/923] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o
[885/923] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a
[886/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o
[887/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o
[888/923] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o
[889/923] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a
[890/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o
[891/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o
[892/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o
[893/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o
[894/923] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o
[895/923] Linking Fortran static library src/Microphys/libmicrophys_lib.a
[896/923] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd
[897/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd
[898/923] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o
[899/923] Linking Fortran executable src/G_unit_tests
[900/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o
[901/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o
/home/jenkins/workspace/clubb_restart/src/clubb_driver.F90:5539:76:

 5539 |                                           p_sfc, rtm_sfc, rtm, l_readiopdata, & !thlm_sfc, &
      |                                                                            1
Warning: Unused dummy argument 'l_readiopdata' at (1) [-Wunused-dummy-argument]
[902/923] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_loss_driver.F90.o
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver.F90:255:28:

  255 |     is_finite_core_value = ( value == value ) .and. ( abs( value ) <= huge( value ) )
      |                            1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
[903/923] Linking Fortran static library src/libclubb_driver_lib.a
[904/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone_loss.dir/Fortran.dd
[905/923] Generating Fortran dyndep file src/CMakeFiles/clubb_tuner.dir/Fortran.dd
[906/923] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_test.dir/Fortran.dd
[907/923] Generating Fortran dyndep file src/CMakeFiles/clubb_thread_test.dir/Fortran.dd
[908/923] Generating Fortran dyndep file src/CMakeFiles/clubb_loss_driver_test.dir/Fortran.dd
[909/923] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone.dir/Fortran.dd
[910/923] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o
[911/923] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o
[912/923] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o
[913/923] Building Fortran object src/CMakeFiles/clubb_standalone_loss.dir/clubb_standalone_loss.F90.o
[914/923] Linking Fortran executable src/clubb_thread_test
[915/923] Linking Fortran executable src/clubb_standalone
[916/923] Linking Fortran executable src/clubb_driver_test
[917/923] Linking Fortran executable src/clubb_standalone_loss
[918/923] Building Fortran object src/CMakeFiles/clubb_loss_driver_test.dir/clubb_loss_driver_test.F90.o
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:273:14:

  273 |     if ( any( test_scaled_rmse /= reference_scaled_rmse ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:278:14:

  278 |     if ( any( test_correlation /= reference_correlation ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:283:14:

  283 |     if ( any( test_std_ratio /= reference_std_ratio ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:288:14:

  288 |     if ( any( test_centered_rmse_norm /= reference_centered_rmse_norm ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:293:14:

  293 |     if ( any( test_bias_norm /= reference_bias_norm ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:512:14:

  512 |     if ( any( clubb_params_all_1 /= clubb_params_all_2 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:521:14:

  521 |          any( reinit_bias_norm_1 /= reinit_bias_norm_2 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:520:14:

  520 |          any( reinit_centered_rmse_norm_1 /= reinit_centered_rmse_norm_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:519:14:

  519 |          any( reinit_std_ratio_1 /= reinit_std_ratio_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:518:14:

  518 |          any( reinit_correlation_1 /= reinit_correlation_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:517:14:

  517 |     if ( any( reinit_scaled_rmse_1 /= reinit_scaled_rmse_2 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:431:14:

  431 |     if ( all( tweaked_scaled_rmse == reference_scaled_rmse ) ) then
      |              1
Warning: Equality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:371:14:

  371 |          any( manual_bias_norm_2 /= manual_bias_norm_1 ) ) then
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:370:14:

  370 |          any( manual_centered_rmse_norm_2 /= manual_centered_rmse_norm_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:369:14:

  369 |          any( manual_std_ratio_2 /= manual_std_ratio_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:368:14:

  368 |          any( manual_correlation_2 /= manual_correlation_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
/home/jenkins/workspace/clubb_restart/src/clubb_loss_driver_test.F90:367:14:

  367 |     if ( any( manual_scaled_rmse_2 /= manual_scaled_rmse_1 ) .or. &
      |              1
Warning: Inequality comparison for REAL(8) at (1) [-Wcompare-reals]
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[920/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o
[921/923] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o
[922/923] Linking Fortran executable src/clubb_tuner
[922/923] Install the project...
-- Install configuration: "Release"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_tuner
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/G_unit_tests
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_thread_test
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone_loss
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_loss_driver_test
-- Set runtime path of "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib:/home/jenkins/workspace/clubb_restart/install/gcc_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types

Build completed successfully, and all source code checks passed.
[Pipeline] catchError
[Pipeline] {
[Pipeline] sh
+ python3 tests/run_restart_test.py bomex -multicol 4
Installing uv 0.11.32 in /home/jenkins/workspace/clubb_restart/.clubb-python-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_restart/.clubb-python-tools/bin
  uv
  uvx
everything's installed!
Creating CLUBB virtualenv: /home/jenkins/workspace/clubb_restart/.venv-python
Downloading cpython-3.12.13-linux-x86_64-gnu (download) (32.6MiB)
 Downloaded cpython-3.12.13-linux-x86_64-gnu (download)
Using CPython 3.12.13
Creating virtual environment at: .venv-python
Activate with: source .venv-python/bin/activate
Installing python requirements into /home/jenkins/workspace/clubb_restart/.venv-python
Using Python 3.12.13 environment at: .venv-python
Resolved 12 packages in 271ms
Downloading pygments (1.2MiB)
Downloading numpy (15.9MiB)
Downloading meson (1.1MiB)
Downloading netcdf4 (9.7MiB)
Downloading cftime (1.6MiB)
 Downloaded cftime
 Downloaded netcdf4
 Downloaded meson
 Downloaded pygments
 Downloaded numpy
Prepared 12 packages in 664ms
Installed 12 packages in 28ms
 + certifi==2026.7.22
 + cftime==1.6.6
 + iniconfig==2.3.0
 + meson==1.12.1
 + netcdf4==1.7.4
 + ninja==1.13.2
 + numpy==2.5.3
 + packaging==26.3
 + pluggy==1.6.0
 + pygments==2.21.0
 + pytest==9.1.1
 + tabulate==0.10.0
Ready: /home/jenkins/workspace/clubb_restart/.venv-python/bin/python
Running standard bomex case... Done!
Running restart bomex case from halfway point... Done!
Results bit-for-bit.
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // parallel
[Pipeline] }
[Pipeline] // stage
[Pipeline] End of Pipeline
Finished: SUCCESS