Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7,
netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 run_scripts/run_clubb_w_varying_flags.py -f run_scripts/run_bindiff_w_flags_config_core_flags.json
Reading settings from run_scripts/run_bindiff_w_flags_config_core_flags.json...
Creating all input flag files in /home/jenkins/workspace/clubb_generalized_vertical_grid_test/input/tunable_parameters ...
Running CLUBB for 18 total flag files
Running cases for flag1_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag2_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag3_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag4_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag5_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag6_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag7_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag8_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag9_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag10_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag11_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag12_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag13_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag14_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag15_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag16_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for flag17_tmp.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
Running cases for configurable_model_flags.in ...
Performing standard run
Running arm
Running arm_97
Running astex_a209
Running atex
Running bomex
Running cgils_s6
Running cgils_s11
Running cgils_s12
Running clex9_nov02
Running clex9_oct14
Running dycoms2_rf01
Running dycoms2_rf01_fixed_sst
Running dycoms2_rf02_do
Running dycoms2_rf02_ds
Running dycoms2_rf02_nd
Running dycoms2_rf02_so
Running fire
Running gabls2
Running gabls3
Running gabls3_night
Running jun25_altocu
Running lba
Running mc3e
Running mpace_a
Running mpace_b
Running mpace_b_silhs
Running nov11_altocu
Running rico
Running rico_silhs
Running twp_ice
Running wangara
All cases ran to completion.
CLUBB run was successful for all cases and all files
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