Started by an SCM change Obtained jenkins_tests/clubb_generalized_vert_grid_host_flags/Jenkinsfile from git https://github.com/larson-group/clubb.git [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on Jenkins in /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git No credentials specified Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 2.34.1' > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 7945eaacac73eb9bbf7dc2b21dd6187c724a8fbf (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 7945eaacac73eb9bbf7dc2b21dd6187c724a8fbf # timeout=10 Commit message: "Removed/Deleted GrADS (.ctl, .dat) file format and reference to it (#1310)" > git rev-list --no-walk 039f9da10548eff43e3aa9c2d928cbed34689600 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Enable Model Flag for Test) [Pipeline] sh + sed -i 's:l_test_grid_generalization.*:l_test_grid_generalization = .true.:g' src/CLUBB_core/model_flags.F90 [Pipeline] sh + sed -i 's:l_force_descending_solves.*:l_force_descending_solves = .true.:g' src/CLUBB_core/model_flags.F90 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Turn Off Sponge Damping in Case Setups) [Pipeline] sh + sed -i 's:thlm_sponge_damp_settings%l_sponge_damping.*:thlm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s6_model.in [Pipeline] sh + sed -i 's:rtm_sponge_damp_settings%l_sponge_damping.*:rtm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s6_model.in [Pipeline] sh + sed -i 's:thlm_sponge_damp_settings%l_sponge_damping.*:thlm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s11_model.in [Pipeline] sh + sed -i 's:rtm_sponge_damp_settings%l_sponge_damping.*:rtm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s11_model.in [Pipeline] sh + sed -i 's:thlm_sponge_damp_settings%l_sponge_damping.*:thlm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s12_model.in [Pipeline] sh + sed -i 's:rtm_sponge_damp_settings%l_sponge_damping.*:rtm_sponge_damp_settings%l_sponge_damping = .false.:g' input/case_setups/cgils_s12_model.in [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Compile) [Pipeline] sh + source /etc/profile.d/larson-group.sh ++ export GIT_EDITOR=vi ++ GIT_EDITOR=vi ++ export SVN_EDITOR=vi ++ SVN_EDITOR=vi ++ export OMP_STACKSIZE=1048579 ++ OMP_STACKSIZE=1048579 ++ export LMOD_ROOT=/opt/lmod/ ++ LMOD_ROOT=/opt/lmod/ ++ source /opt/lmod//lmod/lmod/init/bash +++ '[' -z '' ']' +++ case "$-" in +++ __lmod_vx=x +++ '[' -n x ']' +++ set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash) Shell debugging restarted +++ unset __lmod_vx +++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit ++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core ++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core + module load intel netcdf-fortran + '[' -z '' ']' + case "$-" in + __lmod_sh_dbg=x + '[' -n x ']' + set +x Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output Shell debugging restarted + unset __lmod_sh_dbg + return 0 + ./compile.py -debug -- The Fortran compiler identification is IntelLLVM 2023.2.0 -- The C compiler identification is IntelLLVM 2023.2.0 -- The CXX compiler identification is IntelLLVM 2023.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/intel-oneapi-compilers-2023.2.0-fmyvemnurthfcavvd7ujk6wskls73vdp/compiler/2023.2.0/linux/bin/ifx - skipped -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/intel-oneapi-compilers-2023.2.0-fmyvemnurthfcavvd7ujk6wskls73vdp/compiler/2023.2.0/linux/bin/icx - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/intel-oneapi-compilers-2023.2.0-fmyvemnurthfcavvd7ujk6wskls73vdp/compiler/2023.2.0/linux/bin/icpx - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiling with double precision -- Performing Test NETCDF_ABI_COMPATIBLE -- Performing Test NETCDF_ABI_COMPATIBLE - Success -- SUCCESS: netcdf-fortran found. -- -> Library : /usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib/libnetcdff.so -- -> Modules : /usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/include -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: NetCDF_C_INCLUDE_DIR NetCDF_C_LIBRARY NetCDF_Fortran_INCLUDE_DIR NetCDF_Fortran_LIBRARY -- Build files have been written to: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/build/intel_DEBUG_PRECdouble Using inferred toolchain file: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/cmake/toolchains/linux_x86_64_intel.cmake Setting CLUBB installation dir: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/build/intel_DEBUG_PRECdouble Setting CLUBB installation dir: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble about to cmnake /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/build/intel_DEBUG_PRECdouble Running CMake configure... 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src/SILHS/CMakeFiles/silhs_lib.dir/lh_microphys_var_covar_module.F90.o [779/913] Linking Fortran static library src/Radiation/BUGSrad/libbugsrad_lib.a [780/913] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_importance_sample_module.F90.o /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/src/SILHS/silhs_importance_sample_module.F90(901): warning #5462: Global name too long, shortened from: silhs_importance_sample_moduleeight_cluster_allocation_mp_NUM_CATEGORIES_IN_CLUSTER to: s_importance_sample_moduleeight_cluster_allocation_mp_NUM_CATEGORIES_IN_CLUSTER num_categories_in_cluster = (/ 1, 1, 1, 1, 1, 1, 1, 1 /) ------^ [781/913] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/latin_hypercube_driver_module.F90.o [782/913] Building Fortran object src/Microphys/COAMPS_microphys/CMakeFiles/coamps_lib.dir/adjtq.F.o [783/913] Linking Fortran static library src/Microphys/COAMPS_microphys/libcoamps_lib.a [784/913] Building Fortran object src/SILHS/CMakeFiles/silhs_lib.dir/silhs_api_module.F90.o [785/913] Linking Fortran static library src/SILHS/libsilhs_lib.a [786/913] Generating Fortran dyndep file src/Radiation/CMakeFiles/radiation_lib.dir/Fortran.dd [787/913] Generating Fortran dyndep file src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/Fortran.dd [788/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/cos_solar_zen_module.F90.o [789/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrtype.f90.o [790/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/parameters_radiation.F90.o [791/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/quicksort.F90.o [792/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/soil_vegetation.F90.o [793/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nr.f90.o [794/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/extended_atmosphere_module.F90.o [795/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/rad_lwsw_module.F90.o [796/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/simple_rad_module.F90.o [797/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/enhanced_simann.F90.o [798/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_variables_module.F90.o [799/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/nrutil.f90.o [800/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amoeba.f90.o [801/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/amebsa.f90.o [802/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran_state.f90.o [803/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/bugsrad_driver.F90.o [804/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_s.f90.o [805/913] Building Fortran object src/Numerical_recipes/CMakeFiles/numerical_recipes_lib.dir/ran1_v.f90.o [806/913] Linking Fortran static library src/Numerical_recipes/libnumerical_recipes_lib.a [807/913] Building Fortran object src/Radiation/CMakeFiles/radiation_lib.dir/radiation_module.F90.o [808/913] Linking Fortran static library src/Radiation/libradiation_lib.a [809/913] Generating Fortran dyndep file src/Input_fields/CMakeFiles/input_fields_lib.dir/Fortran.dd [810/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_names.F90.o [811/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/extrapolation.F90.o [812/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_module.F90.o [813/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/hydrostatic_module.F90.o [814/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_reader.F90.o [815/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_netcdf.F90.o [816/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/corr_varnce_input_reader.F90.o [817/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_interpret.F90.o [818/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/stat_file_utils.F90.o [819/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/sounding.F90.o [820/913] Building Fortran object src/Input_fields/CMakeFiles/input_fields_lib.dir/input_fields.F90.o [821/913] Linking Fortran static library src/Input_fields/libinput_fields_lib.a [822/913] Generating Fortran dyndep file src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Fortran.dd [823/913] Generating Fortran dyndep file src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/Fortran.dd [824/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/diag_ustar_module.F90.o [825/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/silhs_category_test.F90.o [826/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/spec_hum_to_mixing_ratio.F90.o [827/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_heaviside_tests.F90.o [828/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/read_corr_mtx_test.F90.o [829/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/Nc_Ncn_test.F90.o [830/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/wangara.F90.o [831/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/w_up_in_cloud_tests.F90.o [832/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/corr_cholesky_mtx_tests.F90.o [833/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/KK_integrals_tests.F90.o [834/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/hole_filling_tests.F90.o [835/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/smooth_min_max_tests.F90.o [836/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/tuner_tests.F90.o [837/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/fill_holes_tests.F90.o [838/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/mu_sigma_hm_tests.F90.o [839/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/time_dependent_input.F90.o [840/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_nov02.F90.o [841/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/jun25.F90.o [842/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/clex9_oct14.F90.o [843/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/nov11.F90.o [844/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/sfc_flux.F90.o [845/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/bomex.F90.o [846/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_0003.F90.o [847/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_3year.F90.o [848/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/neutral_case.F90.o [849/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/fire.F90.o [850/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cloud_feedback.F90.o [851/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/spurious_source_test.F90.o [852/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm.F90.o [853/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3.F90.o [854/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/arm_97.F90.o [855/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/ekman.F90.o [856/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf02.F90.o [857/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/twp_ice.F90.o [858/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/astex_a209.F90.o [859/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/lba.F90.o [860/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/cobra.F90.o [861/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls3_night.F90.o [862/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_a.F90.o [863/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/mpace_b.F90.o [864/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/dycoms2_rf01.F90.o [865/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/gabls2.F90.o [866/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex_long.F90.o [867/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/rico.F90.o [868/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/atex.F90.o [869/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/pdf_parameter_tests.F90.o [870/913] Building Fortran object src/Benchmark_cases/CMakeFiles/benchmark_cases_lib.dir/prescribe_forcings.F90.o [871/913] Linking Fortran static library src/Benchmark_cases/libbenchmark_cases_lib.a [872/913] Building Fortran object src/G_unit_test_types/CMakeFiles/G_unit_test_lib.dir/rev_direction_grid_test.F90.o [873/913] Linking Fortran static library src/G_unit_test_types/libG_unit_test_lib.a [874/913] Building Fortran object src/Microphys/Morrison_microphys/CMakeFiles/morrison_microphys_lib.dir/module_mp_graupel.F90.o [875/913] Linking Fortran static library src/Microphys/Morrison_microphys/libmorrison_microphys_lib.a [876/913] Generating Fortran dyndep file src/Microphys/CMakeFiles/microphys_lib.dir/Fortran.dd [877/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/parameters_microphys.F90.o [878/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/cloud_sed_module.F90.o [879/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/gfdl_activation.F90.o [880/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/silhs_category_variance_module.F90.o [881/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/ice_dfsn_module.F90.o [882/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/mixed_moment_PDF_integrals.F90.o [883/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/pdf_hydromet_microphys_wrapper.F90.o /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/src/Microphys/pdf_hydromet_microphys_wrapper.F90(15): remark #7712: This variable has not been used. [DT_MAIN] itime, dt_main, vert_decorr_coef, & ! In ----------------------^ [884/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_init_cleanup.F90.o [885/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/advance_microphys_module.F90.o [886/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/KK_microphys_module.F90.o [887/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/estimate_scm_microphys_module.F90.o [888/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/morrison_microphys_module.F90.o [889/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/lh_microphys_driver_module.F90.o [890/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/coamps_microphys_driver_module.F90.o [891/913] Building Fortran object src/Microphys/CMakeFiles/microphys_lib.dir/microphys_driver.F90.o [892/913] Linking Fortran static library src/Microphys/libmicrophys_lib.a [893/913] Generating Fortran dyndep file src/CMakeFiles/G_unit_tests.dir/Fortran.dd [894/913] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_lib.dir/Fortran.dd [895/913] Building Fortran object src/CMakeFiles/G_unit_tests.dir/G_unit_tests.F90.o [896/913] Linking Fortran executable src/G_unit_tests [897/913] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/generalized_grid_test.F90.o [898/913] Building Fortran object src/CMakeFiles/clubb_driver_lib.dir/clubb_driver.F90.o /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/src/clubb_driver.F90(5867): remark #7712: This variable has not been used. [IUNIT] ( gr, iunit, hydromet_dim, hm_metadata, & ! In --------------------^ [899/913] Linking Fortran static library src/libclubb_driver_lib.a [900/913] Generating Fortran dyndep file src/CMakeFiles/clubb_standalone.dir/Fortran.dd [901/913] Generating Fortran dyndep file src/CMakeFiles/clubb_tuner.dir/Fortran.dd [902/913] Generating Fortran dyndep file src/CMakeFiles/clubb_driver_test.dir/Fortran.dd [903/913] Generating Fortran dyndep file src/CMakeFiles/clubb_thread_test.dir/Fortran.dd [904/913] Building Fortran object src/CMakeFiles/clubb_standalone.dir/clubb_standalone.F90.o [905/913] Building Fortran object src/CMakeFiles/clubb_driver_test.dir/clubb_driver_test.F90.o [906/913] Building Fortran object src/CMakeFiles/clubb_thread_test.dir/clubb_thread_test.F90.o [907/913] Building Fortran object src/CMakeFiles/clubb_tuner.dir/error.F90.o [908/913] Building Fortran object src/CMakeFiles/clubb_tuner.dir/clubb_tuner.F90.o [909/913] Linking Fortran executable src/clubb_driver_test [910/913] Linking Fortran executable src/clubb_thread_test [911/913] Linking Fortran executable src/clubb_standalone [912/913] Linking Fortran executable src/clubb_tuner [912/913] Install the project... -- Install configuration: "Debug" -- Installing: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/libclubb_driver_lib.a -- Installing: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_tuner -- Set runtime path of "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_tuner" to "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib" -- Installing: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/G_unit_tests -- Set runtime path of "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/G_unit_tests" to "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib" -- Installing: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_thread_test -- Set runtime path of "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_thread_test" to "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib" -- Installing: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_standalone -- Set runtime path of "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_standalone" to "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib" -- Installing: /home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_driver_test -- Set runtime path of "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/clubb_driver_test" to "/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib:/home/jenkins/workspace/clubb_generalized_vert_grid_host_flags/install/intel_DEBUG_PRECdouble/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/oneapi-2023.2.0/netcdf-fortran-4.5.3-dse32dm7kmsorqtyicefw5hz4kl24mhf/lib" CLUBBStandardsCheck.py: beginning check on src PASS: 0 checks failed for src CLUBBStandardsCheck.py: beginning check on src/CLUBB_core PASS: 0 checks failed for src/CLUBB_core CLUBBStandardsCheck.py: beginning check on src/SILHS PASS: 0 checks failed for src/SILHS CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases PASS: 0 checks failed for src/Benchmark_cases CLUBBStandardsCheck.py: beginning check on src/Radiation PASS: 0 checks failed for src/Radiation CLUBBStandardsCheck.py: beginning check on src/Microphys PASS: 0 checks failed for src/Microphys CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys PASS: 0 checks failed for src/Microphys/KK_microphys CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types PASS: 0 checks failed for src/G_unit_test_types [92mBuild completed successfully, and all source code checks passed.[0m [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run) [Pipeline] sh + python3 run_scripts/run_clubb_w_varying_flags.py -f run_scripts/run_bindiff_w_flags_config_host_flags.json Reading settings from run_scripts/run_bindiff_w_flags_config_host_flags.json... Running 124 run_scm.py task(s) with up to 8 worker(s)... COMPLETE -- default / bomex COMPLETE -- default / atex COMPLETE -- default / arm COMPLETE -- default / clex9_nov02 COMPLETE -- default / dycoms2_rf01_fixed_sst COMPLETE -- default / dycoms2_rf01 COMPLETE -- default / clex9_oct14 COMPLETE -- default / dycoms2_rf02_nd COMPLETE -- default / cgils_s12 COMPLETE -- default / dycoms2_rf02_so COMPLETE -- default / astex_a209 COMPLETE -- default / fire COMPLETE -- default / dycoms2_rf02_do COMPLETE -- default / dycoms2_rf02_ds COMPLETE -- default / cgils_s11 COMPLETE -- default / cgils_s6 COMPLETE -- default / jun25_altocu COMPLETE -- default / gabls3_night COMPLETE -- default / mpace_b COMPLETE -- default / mpace_b_silhs COMPLETE -- default / gabls3 COMPLETE -- default / nov11_altocu COMPLETE -- default / rico COMPLETE -- default / rico_silhs COMPLETE -- default / wangara COMPLETE -- flag1 / arm_97 COMPLETE -- default / lba COMPLETE -- flag1 / arm COMPLETE -- flag1 / atex COMPLETE -- flag1 / bomex COMPLETE -- flag1 / astex_a209 COMPLETE -- flag1 / cgils_s11 COMPLETE -- default / gabls2 COMPLETE -- flag1 / cgils_s6 COMPLETE -- flag1 / clex9_nov02 COMPLETE -- flag1 / cgils_s12 COMPLETE -- flag1 / dycoms2_rf01_fixed_sst COMPLETE -- flag1 / clex9_oct14 COMPLETE -- flag1 / dycoms2_rf02_nd COMPLETE -- flag1 / dycoms2_rf02_so COMPLETE -- flag1 / dycoms2_rf02_do COMPLETE -- flag1 / dycoms2_rf01 COMPLETE -- flag1 / fire COMPLETE -- flag1 / dycoms2_rf02_ds COMPLETE -- flag1 / jun25_altocu COMPLETE -- default / twp_ice COMPLETE -- flag1 / gabls3_night COMPLETE -- flag1 / gabls3 COMPLETE -- default / mpace_a COMPLETE -- flag1 / mpace_b COMPLETE -- flag1 / mpace_b_silhs COMPLETE -- flag1 / lba COMPLETE -- flag1 / nov11_altocu COMPLETE -- flag1 / rico COMPLETE -- flag1 / rico_silhs COMPLETE -- flag1 / wangara COMPLETE -- flag2 / arm_97 COMPLETE -- flag2 / arm COMPLETE -- flag2 / atex COMPLETE -- flag2 / bomex COMPLETE -- default / arm_97 COMPLETE -- flag2 / astex_a209 COMPLETE -- flag1 / gabls2 COMPLETE -- flag2 / cgils_s11 COMPLETE -- flag2 / cgils_s12 COMPLETE -- flag2 / clex9_nov02 COMPLETE -- flag2 / dycoms2_rf01_fixed_sst COMPLETE -- flag1 / twp_ice COMPLETE -- flag2 / cgils_s6 COMPLETE -- flag2 / dycoms2_rf02_nd COMPLETE -- flag2 / dycoms2_rf01 COMPLETE -- flag2 / clex9_oct14 COMPLETE -- flag2 / dycoms2_rf02_so COMPLETE -- flag2 / fire COMPLETE -- flag2 / dycoms2_rf02_do COMPLETE -- flag2 / dycoms2_rf02_ds COMPLETE -- flag2 / jun25_altocu COMPLETE -- flag2 / gabls3_night COMPLETE -- flag1 / mpace_a COMPLETE -- flag2 / gabls3 COMPLETE -- flag2 / mpace_b COMPLETE -- flag2 / lba COMPLETE -- flag2 / mpace_b_silhs COMPLETE -- flag2 / nov11_altocu COMPLETE -- flag2 / rico COMPLETE -- flag2 / rico_silhs COMPLETE -- flag2 / wangara COMPLETE -- flag3 / arm_97 COMPLETE -- flag3 / arm COMPLETE -- flag3 / atex COMPLETE -- flag3 / bomex COMPLETE -- flag3 / astex_a209 COMPLETE -- flag1 / mc3e COMPLETE -- flag2 / gabls2 COMPLETE -- flag3 / clex9_nov02 COMPLETE -- flag3 / cgils_s6 COMPLETE -- flag3 / clex9_oct14 COMPLETE -- flag3 / cgils_s12 COMPLETE -- flag3 / dycoms2_rf01_fixed_sst COMPLETE -- flag3 / dycoms2_rf01 COMPLETE -- flag3 / cgils_s11 COMPLETE -- flag3 / dycoms2_rf02_nd COMPLETE -- flag3 / fire COMPLETE -- flag3 / dycoms2_rf02_do COMPLETE -- flag3 / dycoms2_rf02_ds COMPLETE -- flag3 / dycoms2_rf02_so COMPLETE -- flag3 / jun25_altocu COMPLETE -- flag3 / gabls3_night COMPLETE -- flag2 / twp_ice COMPLETE -- flag2 / mpace_a COMPLETE -- flag3 / gabls3 COMPLETE -- flag3 / mpace_b COMPLETE -- flag3 / mpace_b_silhs COMPLETE -- flag3 / lba COMPLETE -- flag3 / rico COMPLETE -- flag3 / nov11_altocu COMPLETE -- flag3 / wangara COMPLETE -- flag3 / rico_silhs COMPLETE -- flag3 / gabls2 COMPLETE -- flag3 / twp_ice COMPLETE -- flag3 / mpace_a COMPLETE -- flag2 / mc3e COMPLETE -- default / mc3e COMPLETE -- flag3 / mc3e =================== Runs Complete =================== All flag sets ran to completion. All CLUBB runs succeeded. [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS