Skipping 437 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTestTest
Constructing wrapper function "f2py_get_grid_shape"...
ngrdcol_out,nzm_out,nzt_out = f2py_get_grid_shape()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_band_solve_multiple_rhs"...
lhs,rhs,soln,rcond = f2py_band_solve_multiple_rhs(solve_name,penta_solve_method,nsup,nsub,lhs,rhs,old_soln,use_rcond,[ngrdcol,ndim,nrhs])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_tridiag_solve_single_rhs_multiple_lhs"...
lhs,rhs,soln,rcond = f2py_tridiag_solve_single_rhs_multiple_lhs(solve_name,tridiag_solve_method,lhs,rhs,use_rcond,[ngrdcol,ndim])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_tridiag_solve_multiple_rhs"...
lhs,rhs,soln,rcond = f2py_tridiag_solve_multiple_rhs(solve_name,tridiag_solve_method,lhs,rhs,use_rcond,[ngrdcol,ndim,nrhs])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_gtsv"...
soln,info = f2py_lapack_gtsv(dl,d,du,b,[n,nrhs])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_gtsvx"...
soln,rcond,ferr,berr,info = f2py_lapack_gtsvx(dl,d,du,b,[n,nrhs])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_gbsv"...
soln,ipiv,info = f2py_lapack_gbsv(kl,ku,ab,b,[n,nrhs])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_gbsvx"...
soln,rcond,ferr,berr,equed,info = f2py_lapack_gbsvx(kl,ku,ab,b,[n,nrhs])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_potrf"...
a_factor,info = f2py_lapack_potrf(uplo,a,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_poequ"...
s,scond,amax,info = f2py_lapack_poequ(a,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_laqsy"...
a_equed,equed = f2py_lapack_laqsy(uplo,a,s,scond,amax,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_syev"...
a_out,w,info = f2py_lapack_syev(jobz,uplo,a,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_tridiag_solve"...
soln = f2py_lapack_tridiag_solve(solve_type,lhs,rhs,[ndim,nrhs,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_tridiag_solvex"...
soln,rcond = f2py_lapack_tridiag_solvex(solve_type,lhs,rhs,[ndim,nrhs,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_band_solve"...
soln = f2py_lapack_band_solve(solve_type,nsup,nsub,lhs,rhs,[ndim,nrhs,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lapack_band_solvex"...
soln,rcond = f2py_lapack_band_solvex(solve_type,nsup,nsub,lhs,rhs,[ndim,nrhs,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_penta_bicgstab_solve"...
soln,iters = f2py_penta_bicgstab_solve(lhs,rhs,[ndim,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_penta_lu_solve_single_rhs_multiple_lhs"...
soln = f2py_penta_lu_solve_single_rhs_multiple_lhs(lhs,rhs,[ndim,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_penta_lu_solve_multiple_rhs_lhs"...
soln = f2py_penta_lu_solve_multiple_rhs_lhs(lhs,rhs,[ndim,nrhs,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_tridiag_lu_solve_single_rhs_lhs"...
soln = f2py_tridiag_lu_solve_single_rhs_lhs(lhs,rhs,[ndim])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_tridiag_lu_solve_single_rhs_multiple_lhs"...
soln = f2py_tridiag_lu_solve_single_rhs_multiple_lhs(lhs,rhs,[ndim,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_tridiag_lu_solve_multiple_rhs_lhs"...
soln = f2py_tridiag_lu_solve_multiple_rhs_lhs(lhs,rhs,[ndim,nrhs,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_thlm2t_in_k_1d"...
t_in_k = f2py_thlm2t_in_k_1d(thlm,exner,rcm,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_err_info"...
f2py_init_err_info(ngrdcol)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_default_config_flags"...
iiPDF_type,ipdf_call_placement,penta_solve_method,tridiag_solve_method,saturation_formula,Lscale_method,grid_remap_method,grid_adapt_in_time_method,fill_holes_type,l_use_precip_frac,l_predict_upwp_vpwp,l_ho_nontrad_coriolis,l_ho_trad_coriolis,l_min_wp2_from_corr_wx,l_min_xp2_from_corr_wx,l_C2_cloud_frac,l_diffuse_rtm_and_thlm,l_stability_correct_Kh_N2_zm,l_calc_thlp2_rad,l_upwind_xpyp_ta,l_upwind_xm_ma,l_uv_nudge,l_rtm_nudge,l_vert_avg_closure,l_trapezoidal_rule_zt,l_trapezoidal_rule_zm,l_call_pdf_closure_twice,l_standard_term_ta,l_partial_upwind_wp3,l_godunov_upwind_wpxp_ta,l_godunov_upwind_xpyp_ta,l_use_cloud_cover,l_diagnose_correlations,l_calc_w_corr,l_const_Nc_in_cloud,l_fix_w_chi_eta_correlations,l_stability_correct_tau_zm,l_damp_wp2_using_em,l_do_expldiff_rtm_thlm,l_Lscale_plume_centered,l_use_C7_Richardson,l_use_C11_Richardson,l_use_shear_Richardson,l_brunt_vaisala_freq_moist,l_use_thvm_in_bv_freq,l_rcm_supersat_adj,l_damp_wp3_Skw_squared,l_prescribed_avg_deltaz,l_lmm_stepping,l_e3sm_config,l_vary_convect_depth,l_use_tke_in_wp3_pr_turb_term,l_use_tke_in_wp2_wp3_K_dfsn,l_use_wp3_lim_with_smth_Heaviside,l_smooth_Heaviside_tau_wpxp,l_modify_limiters_for_cnvg_test,l_enable_relaxed_clipping,l_linearize_pbl_winds,l_mono_flux_lim_thlm,l_mono_flux_lim_rtm,l_mono_flux_lim_um,l_mono_flux_lim_vm,l_mono_flux_lim_spikefix,l_host_applies_sfc_fluxes,l_wp2_fill_holes_tke,l_add_dycore_grid = f2py_set_default_config_flags()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_config_flags"...
f2py_init_config_flags(iiPDF_type,ipdf_call_placement,penta_solve_method,tridiag_solve_method,saturation_formula,Lscale_method,grid_remap_method,grid_adapt_in_time_method,fill_holes_type,l_use_precip_frac,l_predict_upwp_vpwp,l_ho_nontrad_coriolis,l_ho_trad_coriolis,l_min_wp2_from_corr_wx,l_min_xp2_from_corr_wx,l_C2_cloud_frac,l_diffuse_rtm_and_thlm,l_stability_correct_Kh_N2_zm,l_calc_thlp2_rad,l_upwind_xpyp_ta,l_upwind_xm_ma,l_uv_nudge,l_rtm_nudge,l_vert_avg_closure,l_trapezoidal_rule_zt,l_trapezoidal_rule_zm,l_call_pdf_closure_twice,l_standard_term_ta,l_partial_upwind_wp3,l_godunov_upwind_wpxp_ta,l_godunov_upwind_xpyp_ta,l_use_cloud_cover,l_diagnose_correlations,l_calc_w_corr,l_const_Nc_in_cloud,l_fix_w_chi_eta_correlations,l_stability_correct_tau_zm,l_damp_wp2_using_em,l_do_expldiff_rtm_thlm,l_Lscale_plume_centered,l_use_C7_Richardson,l_use_C11_Richardson,l_use_shear_Richardson,l_brunt_vaisala_freq_moist,l_use_thvm_in_bv_freq,l_rcm_supersat_adj,l_damp_wp3_Skw_squared,l_prescribed_avg_deltaz,l_lmm_stepping,l_e3sm_config,l_vary_convect_depth,l_use_tke_in_wp3_pr_turb_term,l_use_tke_in_wp2_wp3_K_dfsn,l_use_wp3_lim_with_smth_Heaviside,l_smooth_Heaviside_tau_wpxp,l_modify_limiters_for_cnvg_test,l_enable_relaxed_clipping,l_linearize_pbl_winds,l_mono_flux_lim_thlm,l_mono_flux_lim_rtm,l_mono_flux_lim_um,l_mono_flux_lim_vm,l_mono_flux_lim_spikefix,l_host_applies_sfc_fluxes,l_wp2_fill_holes_tke,l_add_dycore_grid)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_setup_grid"...
f2py_setup_grid(sfc_elevation,l_implemented,l_ascending_grid,grid_type,deltaz,zm_init,zm_top,momentum_heights,thermodynamic_heights,[nzmax,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_nparams"...
nparams_out = f2py_get_nparams()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_clubb_params"...
clubb_params = f2py_init_clubb_params(ngrdcol,iunit,filename,nparams_in)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_param_names"...
param_names = f2py_get_param_names(nparams)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_clubb_params_file"...
clubb_params = f2py_init_clubb_params_file(ngrdcol,filename,nparams,[flen_bn])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_derived_params"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
lmin,mixt_frac_max_mag = f2py_calc_derived_params(grid_type,deltaz,clubb_params,l_prescribed_avg_deltaz,[ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_clubb_loss"...
num_variables,total_param_sets,num_time_windows,clubb_var_names = f2py_init_clubb_loss(runfile)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_clubb_params_all"...
clubb_params_all_out = f2py_get_clubb_params_all(total_param_sets,nparams_in)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_clubb_get_loss_for_params"...
scaled_rmse,correlation,std_ratio,centered_rmse_norm,bias_norm = f2py_clubb_get_loss_for_params(num_variables,num_time_windows,clubb_params_all,[total_param_sets,nparams_in])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_finalize_clubb_loss"...
f2py_finalize_clubb_loss()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_pdf_params"...
f2py_init_pdf_params(nz,ngrdcol)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_pdf_params_zm"...
f2py_init_pdf_params_zm(nz,ngrdcol)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_init_pdf_implicit"...
f2py_init_pdf_implicit(nz,ngrdcol,sclr_dim)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_cubic_solve"...
roots_real,roots_imag = f2py_cubic_solve(a_coef,b_coef,c_coef,d_coef,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_quadratic_solve"...
roots_real,roots_imag = f2py_quadratic_solve(a_coef,b_coef,c_coef,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "get_pdf_params_dims"...
ngrdcol,nz,ngrdcol_zm,nz_zm = get_pdf_params_dims()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "get_pdf_params_fields"...
w_1,w_2,varnce_w_1,varnce_w_2,rt_1,rt_2,varnce_rt_1,varnce_rt_2,thl_1,thl_2,varnce_thl_1,varnce_thl_2,corr_w_rt_1,corr_w_rt_2,corr_w_thl_1,corr_w_thl_2,corr_rt_thl_1,corr_rt_thl_2,alpha_thl,alpha_rt,crt_1,crt_2,cthl_1,cthl_2,chi_1,chi_2,stdev_chi_1,stdev_chi_2,stdev_eta_1,stdev_eta_2,covar_chi_eta_1,covar_chi_eta_2,corr_w_chi_1,corr_w_chi_2,corr_w_eta_1,corr_w_eta_2,corr_chi_eta_1,corr_chi_eta_2,rsatl_1,rsatl_2,rc_1,rc_2,cloud_frac_1,cloud_frac_2,mixt_frac,ice_supersat_frac_1,ice_supersat_frac_2 = get_pdf_params_fields(ngrdcol,nz,which)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "set_pdf_params_fields"...
set_pdf_params_fields(which,w_1,w_2,varnce_w_1,varnce_w_2,rt_1,rt_2,varnce_rt_1,varnce_rt_2,thl_1,thl_2,varnce_thl_1,varnce_thl_2,corr_w_rt_1,corr_w_rt_2,corr_w_thl_1,corr_w_thl_2,corr_rt_thl_1,corr_rt_thl_2,alpha_thl,alpha_rt,crt_1,crt_2,cthl_1,cthl_2,chi_1,chi_2,stdev_chi_1,stdev_chi_2,stdev_eta_1,stdev_eta_2,covar_chi_eta_1,covar_chi_eta_2,corr_w_chi_1,corr_w_chi_2,corr_w_eta_1,corr_w_eta_2,corr_chi_eta_1,corr_chi_eta_2,rsatl_1,rsatl_2,rc_1,rc_2,cloud_frac_1,cloud_frac_2,mixt_frac,ice_supersat_frac_1,ice_supersat_frac_2,[ngrdcol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "get_implicit_coefs_dims"...
ngrdcol,nz,sclr_dim = get_implicit_coefs_dims()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "get_implicit_coefs_fields"...
coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit,coef_wp2sclrp_implicit,term_wp2sclrp_explicit,coef_wpsclrp2_implicit,term_wpsclrp2_explicit,coef_wprtpsclrp_implicit,term_wprtpsclrp_explicit,coef_wpthlpsclrp_implicit,term_wpthlpsclrp_explicit = get_implicit_coefs_fields(ngrdcol,nz,sclr_dim,[sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "get_implicit_coefs_fields_2d"...
coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit = get_implicit_coefs_fields_2d(ngrdcol,nz)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "set_implicit_coefs_fields"...
set_implicit_coefs_fields(sclr_dim,coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit,coef_wp2sclrp_implicit,term_wp2sclrp_explicit,coef_wpsclrp2_implicit,term_wpsclrp2_explicit,coef_wprtpsclrp_implicit,term_wprtpsclrp_explicit,coef_wpthlpsclrp_implicit,term_wpthlpsclrp_explicit,[ngrdcol,nz,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "set_implicit_coefs_fields_2d"...
set_implicit_coefs_fields_2d(coef_wp4_implicit,coef_wp2rtp_implicit,term_wp2rtp_explicit,coef_wp2thlp_implicit,term_wp2thlp_explicit,coef_wp2up_implicit,term_wp2up_explicit,coef_wp2vp_implicit,term_wp2vp_explicit,coef_wprtp2_implicit,term_wprtp2_explicit,coef_wpthlp2_implicit,term_wpthlp2_explicit,coef_wprtpthlp_implicit,term_wprtpthlp_explicit,coef_wpup2_implicit,term_wpup2_explicit,coef_wpvp2_implicit,term_wpvp2_explicit,[ngrdcol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_init"...
f2py_stats_init(registry_path,output_path,ncol,stats_tsamp,stats_tout,dt_main,day_in,month_in,year_in,time_initial,stats_tstart,stats_tend,zt,zm,sclr_dim,edsclr_dim,[nzt,nzm])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_init_with_params"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
f2py_stats_init_with_params(registry_path,output_path,stats_tsamp,stats_tout,dt_main,day_in,month_in,year_in,time_initial,stats_tstart,stats_tend,zt,zm,sclr_dim,edsclr_dim,clubb_params,param_names,[ncol,nzt,nzm])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_finalize"...
f2py_stats_finalize()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_stats_config"...
l_enabled,ncol,nvars,stats_nsamp,stats_nout,samples_per_write,time_index,l_sample,l_last_sample = f2py_get_stats_config()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_stats_var_meta"...
name,grid_name,units,long_name,grid_id,nz = f2py_get_stats_var_meta(ivar)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_stats_var_data"...
buffer,nsamples = f2py_get_stats_var_data(ivar,ncol,nz)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_stats_var_data"...
f2py_set_stats_var_data(ivar,buffer,nsamples,[ncol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_begin_timestep"...
f2py_stats_begin_timestep(itime)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_end_timestep"...
f2py_stats_end_timestep(time_value)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_scalar"...
f2py_stats_update_scalar(name,values,icol,level)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_1d"...
f2py_stats_update_1d(name,values,icol,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_2d"...
f2py_stats_update_2d(name,values,[ncol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_begin_budget_scalar"...
f2py_stats_begin_budget_scalar(name,values,icol)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_begin_budget_1d"...
f2py_stats_begin_budget_1d(name,values,icol,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_begin_budget_2d"...
f2py_stats_begin_budget_2d(name,values,[ncol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_budget_scalar"...
f2py_stats_update_budget_scalar(name,values,icol,level)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_budget_1d"...
f2py_stats_update_budget_1d(name,values,icol,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_budget_2d"...
f2py_stats_update_budget_2d(name,values,[ncol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_finalize_budget_scalar"...
f2py_stats_finalize_budget_scalar(name,values,icol,l_count_sample)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_finalize_budget_1d"...
f2py_stats_finalize_budget_1d(name,values,icol,l_count,[n])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_finalize_budget_2d"...
f2py_stats_finalize_budget_2d(name,values,l_count,[ncol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_var_on_stats_list"...
l_result = f2py_var_on_stats_list(name)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_update_grid"...
f2py_stats_update_grid(zt_src,zm_src,rho_vals,rho_levels,p_sfc,[ncol,nzt,nzm,nrho])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_lh_samples_init"...
f2py_stats_lh_samples_init(num_samples,nl_names,u_names,zt_vals,[nzt,n_nl,n_u])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_lh_samples_write_ln"...
f2py_stats_lh_samples_write_ln(samples,[ncol,nsamp,nzt,nvars])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_lh_samples_write_u"...
f2py_stats_lh_samples_write_u(uniform_vals,mixture_comp,sample_weights,[ncol,nsamp,nzt,nvars])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_prescribe_forcings"...
rtm,wm_zm,wm_zt,ug,vg,um_ref,vm_ref,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,wprtp_forcing,wpthlp_forcing,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,wpsclrp,sclrm_forcing,edsclrm_forcing,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,t_sfc,p_sfc,sens_ht,latent_ht,wpsclrp_sfc,wpedsclrp_sfc = f2py_prescribe_forcings(sclr_dim,edsclr_dim,runtype,sfctype,time_current,time_initial,dt,l_readiopdata,um,vm,thlm,p_in_pa,exner,rho,rho_zm,thvm,zt_in,l_t_dependent,l_ignore_forcings,l_input_xpwp_sfc,l_modify_bc_for_cnvg_test,l_do_expldiff_rtm_thlm,saturation_formula,l_add_dycore_grid,grid_remap_method,grid_adapt_in_time_method,rtm,wm_zm,wm_zt,ug,vg,um_ref,vm_ref,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,wprtp_forcing,wpthlp_forcing,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,wpsclrp,sclrm_forcing,edsclrm_forcing,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,t_sfc,p_sfc,sens_ht,latent_ht,wpsclrp_sfc,wpedsclrp_sfc,[nzm,nzt,ngrdcol,sclr_dim_transport,edsclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_advance_clubb_core"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
um,vm,up3,vp3,thlm,rtm,rtp3,thlp3,wp3,upwp,vpwp,up2,vp2,wprtp,wpthlp,rtp2,thlp2,rtpthlp,wp2,sclrm,sclrp3,wpsclrp,sclrp2,sclrprtp,sclrpthlp,p_in_pa,exner,rcm,cloud_frac,wp2thvp,wp2up,wpthvp,rtpthvp,thlpthvp,sclrpthvp,wp2rtp,wp2thlp,wpup2,wpvp2,ice_supersat_frac,uprcp,vprcp,rc_coef_zm,wp4,wp2up2,wp2vp2,um_pert,vm_pert,upwp_pert,vpwp_pert,edsclrm,rcm_in_layer,cloud_cover,w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac,wprcp,invrs_tau_zm,kh_zt,kh_zm,thlprcp,lscale = f2py_advance_clubb_core(l_implemented,dt,fcor,fcor_y,sfc_elevation,hydromet_dim,edsclr_dim,sclr_tol,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,sclrm_forcing,edsclrm_forcing,wprtp_forcing,wpthlp_forcing,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,wm_zm,wm_zt,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,p_sfc,wpsclrp_sfc,wpedsclrp_sfc,upwp_sfc_pert,vpwp_sfc_pert,rtm_ref,thlm_ref,um_ref,vm_ref,ug,vg,rho_zm,rho,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,thv_ds_zt,l_mix_rat_hm,rfrzm,wphydrometp,wp2hmp,rtphmp_zt,thlphmp_zt,host_dx,host_dy,clubb_params,lmin,mixt_frac_max_mag,t0_val,ts_nudge,rtm_min,rtm_nudge_max_altitude,um,vm,up3,vp3,thlm,rtm,rtp3,thlp3,wp3,upwp,vpwp,up2,vp2,wprtp,wpthlp,rtp2,thlp2,rtpthlp,wp2,sclrm,sclrp3,wpsclrp,sclrp2,sclrprtp,sclrpthlp,p_in_pa,exner,rcm,cloud_frac,wp2thvp,wp2up,wpthvp,rtpthvp,thlpthvp,sclrpthvp,wp2rtp,wp2thlp,wpup2,wpvp2,ice_supersat_frac,uprcp,vprcp,rc_coef_zm,wp4,wp2up2,wp2vp2,um_pert,vm_pert,upwp_pert,vpwp_pert,edsclrm,[nzm,nzt,ngrdcol,sclr_dim,hydromet_dim_transport,sclr_dim_transport,edsclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calculate_thvm"...
thvm = f2py_calculate_thvm(thlm,rtm,rcm,exner,thv_ds_zt,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_hydrostatic"...
p_in_Pa,p_in_Pa_zm,exner,exner_zm,rho,rho_zm = f2py_hydrostatic(nzm,thvm,p_sfc,[ngrdcol,nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zt2zm_2d"...
azm = f2py_zt2zm_2d(nzm,azt,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zm2zt_2d"...
azt = f2py_zm2zt_2d(nzt,azm,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zt2zm2zt_2d"...
azt_smoothed = f2py_zt2zm2zt_2d(nzm,azt,zt_min,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_ddzm_2d"...
d_azm_dzt = f2py_ddzm_2d(nzt,azm,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_ddzt_2d"...
d_azt_dzm = f2py_ddzt_2d(nzm,azt,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sat_mixrat_liq_2d"...
rsat = f2py_sat_mixrat_liq_2d(p_in_Pa,t_in_k,saturation_formula,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sat_mixrat_ice_2d"...
rsat = f2py_sat_mixrat_ice_2d(p_in_Pa,t_in_k,saturation_formula,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_rcm_sat_adj"...
rcm_out = f2py_rcm_sat_adj(thlm,rtm,p_in_Pa,exner,saturation_formula)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calculate_thlp2_rad"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
thlp2_forcing = f2py_calculate_thlp2_rad(rcm,thlprcp,radht,clubb_params,thlp2_forcing,[ngrdcol,nzm,nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_cos_solar_zen"...
cos_zen = f2py_cos_solar_zen(day,month,year,current_time,lat_vals,lon_vals)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_simplified_radiation_params"...
f2py_set_simplified_radiation_params(f0_in,f1_in,kappa_in,eff_drop_radius_in,alvdr_in,gc_in,omega_in,l_rad_above_cloud_in,l_sw_radiation_in,l_fix_cos_solar_zen_in,nparam_in,fs_values_in,cos_solar_zen_values_in,cos_solar_zen_times_in)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sunray_sw"...
frad_sw = f2py_sunray_sw(rcm,rho,xi_abs,dzt,zm,zt,radius,a,gc,fs0,omega,l_center,[ngrdcol,nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_cloud_drop_sed"...
rcm_mc,thlm_mc = f2py_cloud_drop_sed(rcm,ncm,rho_zm,rho,exner,sigma_g,rcm_mc,thlm_mc,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zero_pdf_params"...
f2py_zero_pdf_params(which)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zero_pdf_implicit_coefs_terms"...
f2py_zero_pdf_implicit_coefs_terms()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_check_clubb_settings"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
f2py_check_clubb_settings(edsclr_dim,params,l_implemented,l_input_fields,[ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_check_parameters"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
f2py_check_parameters(clubb_params,[ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_parameter_hard_bounds"...
hard_bounds = f2py_get_parameter_hard_bounds(nparams_in)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_clubb_debug_level"...
f2py_set_clubb_debug_level(level)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_cleanup_grid"...
f2py_cleanup_grid()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_setup_grid_heights"...
f2py_setup_grid_heights(l_implemented,l_ascending_grid,grid_type,deltaz,zm_init,momentum_heights,thermodynamic_heights,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_read_grid_heights"...
momentum_heights,thermodynamic_heights = f2py_read_grid_heights(nzmax,grid_type,zm_grid_fname,zt_grid_fname,file_unit)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_cleanup_err_info"...
f2py_cleanup_err_info()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_err_info_values"...
f2py_set_err_info_values(chunk_idx,mpi_rank,lat,lon,[ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_get_err_info_values"...
chunk_idx,mpi_rank,lat,lon = f2py_get_err_info_values(ngrdcol)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_reset_err_code"...
f2py_reset_err_code()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_err_code"...
f2py_set_err_code(err_code,[ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_initialize_error_headers"...
f2py_initialize_error_headers()
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_file_read_1d"...
variable = f2py_file_read_1d(file_unit,path_and_filename,num_datapts,entries_per_line)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_julian2gregorian_date"...
day,month,year = f2py_julian2gregorian_date(julian_date)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_gregorian2julian_day"...
julian_day = f2py_gregorian2julian_day(day,month,year)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_leap_year"...
is_leap_year = f2py_leap_year(year)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lin_interpolate_two_points"...
var_interp = f2py_lin_interpolate_two_points(height_int,height_high,height_low,var_high,var_low)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_mono_cubic_interp"...
f_out = f2py_mono_cubic_interp(z_in,km1,k00,kp1,kp2,zm1,z00,zp1,zp2,fm1,f00,fp1,fp2)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zlinterp_fnc"...
var_out = f2py_zlinterp_fnc(grid_out,grid_src,var_src,[dim_out,dim_src])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_plinterp_fnc"...
var_out = f2py_plinterp_fnc(grid_out,grid_src,var_src,[dim_out,dim_src])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_ri_zm"...
ri_zm = f2py_calc_ri_zm(bv_freq_sqd,shear,lim_bv,lim_shear,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_vertical_avg"...
avg_out = f2py_vertical_avg(rho_ds,field,dz,[total_idx])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_vertical_integral"...
integral_out = f2py_vertical_integral(rho_ds,field,dz,[total_idx])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_zm2zt2zm_2d"...
azm_smoothed = f2py_zm2zt2zm_2d(nzt,azm,zm_min,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_pvertinterp"...
interp_var = f2py_pvertinterp(p_mid,p_out,input_var,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_compute_current_date"...
current_day,current_month,current_year,seconds_since_current_date = f2py_compute_current_date(previous_day,previous_month,previous_year,seconds_since_previous_date)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_set_lscale_max"...
lscale_max = f2py_set_lscale_max(l_implemented,host_dx,host_dy,[ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_term_ma_zt_lhs"...
lhs_ma = f2py_term_ma_zt_lhs(wm_zt,weights_zt2zm,invrs_dzt,invrs_dzm,l_upwind_xm_ma,grid_dir,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_term_ma_zm_lhs"...
lhs_ma = f2py_term_ma_zm_lhs(wm_zm,invrs_dzm,weights_zm2zt,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_diffusion_zt_lhs"...
lhs = f2py_diffusion_zt_lhs(k_zm,k_zt,nu,invrs_rho_ds_zt,rho_ds_zm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_diffusion_zm_lhs"...
lhs = f2py_diffusion_zm_lhs(k_zt,k_zm,nu,invrs_rho_ds_zm,rho_ds_zt,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_smooth_heaviside_peskin"...
smth_output = f2py_smooth_heaviside_peskin(input,smth_range,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_smooth_max_scalar_array"...
output_var = f2py_smooth_max_scalar_array(input_var1,input_var2,smth_coef,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_smooth_max_array_scalar"...
output_var = f2py_smooth_max_array_scalar(input_var1,input_var2,smth_coef,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_smooth_min_scalar_array"...
output_var = f2py_smooth_min_scalar_array(input_var1,input_var2,smth_coef,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_smooth_min_array_scalar"...
output_var = f2py_smooth_min_array_scalar(input_var1,input_var2,smth_coef,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_xpwp_2d"...
xpwp = f2py_calc_xpwp_2d(km_zm,xm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_ddzt_umvm_sqd"...
ddzt_umvm_sqd = f2py_calc_ddzt_umvm_sqd(nzm,um,vm,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_wp3_on_wp2"...
wp3_on_wp2,wp3_on_wp2_zt = f2py_calc_wp3_on_wp2(wp2,wp3,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lscale_width_vert_avg"...
avg_out = f2py_lscale_width_vert_avg(smth_type,var_profile,lscale_zm,rho_ds_zm,var_below_ground_value,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_wp23_term_splat_lhs"...
lhs_splat_wp2,lhs_splat_wp3 = f2py_wp23_term_splat_lhs(nzt,c_wp2_splat,brunt_vaisala_freq_sqd_mixed,lscale_zm,rho_ds_zm,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_smooth_corr_quotient"...
quotient = f2py_smooth_corr_quotient(numerator,denominator,denom_thresh,[ngrdcol,nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_comp_corrs_binormal"...
corr_x_y_1,corr_x_y_2 = f2py_calc_comp_corrs_binormal(xpyp,xm,ym,mu_x_1,mu_x_2,mu_y_1,mu_y_2,sigma_x_1_sqd,sigma_x_2_sqd,sigma_y_1_sqd,sigma_y_2_sqd,mixt_frac,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_mean_l2n"...
mu_x_n = f2py_mean_l2n(mu_x,sigma2_on_mu2)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stdev_l2n"...
sigma_x_n = f2py_stdev_l2n(sigma2_on_mu2)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_corr_nn2nl"...
corr_x_y = f2py_corr_nn2nl(corr_x_y_n,sigma_y_n,y_sigma2_on_mu2,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_corr_nn2ll"...
corr_x_y = f2py_corr_nn2ll(corr_x_y_n,sigma_x_n,sigma_y_n,x_sigma2_on_mu2,y_sigma2_on_mu2,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_compute_mean_binormal"...
xm = f2py_compute_mean_binormal(mu_x_1,mu_x_2,mixt_frac)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_compute_variance_binormal"...
xp2 = f2py_compute_variance_binormal(xm,mu_x_1,mu_x_2,stdev_x_1,stdev_x_2,mixt_frac)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_corr_chi_x"...
corr_chi_x_i = f2py_calc_corr_chi_x(crt_i,cthl_i,sigma_rt_i,sigma_thl_i,sigma_chi_i,corr_rt_x_i,corr_thl_x_i)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_corr_eta_x"...
corr_eta_x_i = f2py_calc_corr_eta_x(crt_i,cthl_i,sigma_rt_i,sigma_thl_i,sigma_eta_i,corr_rt_x_i,corr_thl_x_i)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_nc_in_cloud_to_ncnm"...
ncnm = f2py_nc_in_cloud_to_ncnm(mu_chi_1,mu_chi_2,sigma_chi_1,sigma_chi_2,mixt_frac,nc_in_cloud,cloud_frac_1,cloud_frac_2,const_ncnp2_on_ncnm2,const_corr_chi_ncn)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_cholesky_factor"...
a_scaling,a_cholesky,l_scaled = f2py_cholesky_factor(a_input,[ndim])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_mirror_lower_triangular_matrix"...
matrix = f2py_mirror_lower_triangular_matrix(matrix,[nvars])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_diagnose_correlations"...
corr_array = f2py_diagnose_correlations(iipdf_w,corr_array_pre,l_calc_w_corr,[pdf_dim])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_cholesky_corr_mtx_approx"...
corr_cholesky_mtx,corr_mtx_approx = f2py_calc_cholesky_corr_mtx_approx(iipdf_w,corr_matrix,[n_variables])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_skx_func"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
skx = f2py_skx_func(xp2,xp3,x_tol,clubb_params,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_lg_2005_ansatz"...
skx = f2py_lg_2005_ansatz(skw,wpxp,wp2,xp2,beta,sigma_sqd_w,x_tol,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_xp3_lg_2005_ansatz"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
xp3 = f2py_xp3_lg_2005_ansatz(skw_zt,wpxp_zt,wp2_zt,xp2_zt,sigma_sqd_w_zt,clubb_params,x_tol,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_compute_gamma_skw"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
gamma_skw_fnc,gamma_skw_fnc_zt = f2py_compute_gamma_skw(skw_zm,clubb_params,skw_zt,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sponge_damp_xm"...
xm_p = f2py_sponge_damp_xm(dt,zt,zm,xm_ref,xm,tau_sponge_damp,sponge_layer_depth,[nzm,nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sponge_damp_xp2"...
xp2_damped = f2py_sponge_damp_xp2(dt,zm,xp2,x_tol_sqd,tau_sponge_damp,sponge_layer_depth,[nzm])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sponge_damp_xp3"...
xp3_damped = f2py_sponge_damp_xp3(dt,z,zm,xp3,tau_sponge_damp,sponge_layer_depth,[nzm,nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calculate_spurious_source"...
spurious_source = f2py_calculate_spurious_source(integral_after,integral_before,flux_top,flux_sfc,integral_forcing,dt)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_remap_vals_to_target_same_grid"...
target_values = f2py_remap_vals_to_target_same_grid(nzm,nzt,source_values,target_values_idx,rho_lin_spline_vals,rho_lin_spline_levels,iv,p_sfc,grid_remap_method,l_zt_variable,[ngrdcol,source_values_idx,total_idx_rho_lin_spline])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_sfc_varnce_check"...
f2py_sfc_varnce_check(sclr_dim,wp2_sfc,up2_sfc,vp2_sfc,thlp2_sfc,rtp2_sfc,rtpthlp_sfc,sclrp2_sfc,sclrprtp_sfc,sclrpthlp_sfc,[sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_parameterization_check"...
f2py_parameterization_check(sclr_dim,edsclr_dim,thlm_forcing,rtm_forcing,um_forcing,vm_forcing,wm_zm,wm_zt,p_in_pa,rho_zm,rho,exner,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,thv_ds_zt,wpthlp_sfc,wprtp_sfc,upwp_sfc,vpwp_sfc,p_sfc,um,upwp,vm,vpwp,up2,vp2,rtm,wprtp,thlm,wpthlp,wp2,wp3,rtp2,thlp2,rtpthlp,prefix,wpsclrp_sfc,wpedsclrp_sfc,sclrm,wpsclrp,sclrp2,sclrprtp,sclrpthlp,sclrm_forcing,edsclrm,edsclrm_forcing,[nzm,nzt,ngrdcol,sclr_dim_transport,edsclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_wp4_pdf"...
wp4 = f2py_calc_wp4_pdf(wm,w_1,w_2,varnce_w_1,varnce_w_2,mixt_frac,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_wp2xp_pdf"...
wp2xp = f2py_calc_wp2xp_pdf(wm,xm,w_1,w_2,x_1,x_2,varnce_w_1,varnce_w_2,varnce_x_1,varnce_x_2,corr_w_x_1,corr_w_x_2,mixt_frac,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_wpxp2_pdf"...
wpxp2 = f2py_calc_wpxp2_pdf(wm,xm,w_1,w_2,x_1,x_2,varnce_w_1,varnce_w_2,varnce_x_1,varnce_x_2,corr_w_x_1,corr_w_x_2,mixt_frac,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_wpxpyp_pdf"...
wpxpyp = f2py_calc_wpxpyp_pdf(wm,xm,ym,w_1,w_2,x_1,x_2,y_1,y_2,varnce_w_1,varnce_w_2,varnce_x_1,varnce_x_2,varnce_y_1,varnce_y_2,corr_w_x_1,corr_w_x_2,corr_w_y_1,corr_w_y_2,corr_x_y_1,corr_x_y_2,mixt_frac,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_w_up_in_cloud"...
w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac = f2py_calc_w_up_in_cloud(mixt_frac,cloud_frac_1,cloud_frac_2,w_1,w_2,varnce_w_1,varnce_w_2,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_pdf_closure_check"...
f2py_pdf_closure_check(sclr_dim,wp4,wprtp2,wp2rtp,wpthlp2,wp2thlp,cloud_frac,rcm,wpthvp,wp2thvp,wp2up,rtpthvp,thlpthvp,wprcp,wp2rcp,rtprcp,thlprcp,rcp2,wprtpthlp,crt_1,crt_2,cthl_1,cthl_2,sclrpthvp,sclrprcp,wpsclrp2,wpsclrprtp,wpsclrpthlp,wp2sclrp,[nz,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_length_check"...
f2py_length_check(lscale,lscale_up,lscale_down,[nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_assert_corr_symmetric"...
f2py_assert_corr_symmetric(corr_array_n,[pdf_dim])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_xpyp_term_ta_pdf_lhs"...
lhs_ta = f2py_xpyp_term_ta_pdf_lhs(coef_wpxpyp_implicit,rho_ds_zt,rho_ds_zm,invrs_rho_ds_zm,l_upwind_xpyp_turbulent_adv,sgn_turbulent_vel,coef_wpxpyp_implicit_zm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_xpyp_term_ta_pdf_lhs_godunov"...
lhs_ta = f2py_xpyp_term_ta_pdf_lhs_godunov(coef_wpxpyp_implicit,invrs_rho_ds_zm,rho_ds_zm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_xpyp_term_ta_pdf_rhs"...
rhs_ta = f2py_xpyp_term_ta_pdf_rhs(term_wpxpyp_explicit,rho_ds_zt,rho_ds_zm,invrs_rho_ds_zm,l_upwind_xpyp_turbulent_adv,sgn_turbulent_vel,term_wpxpyp_explicit_zm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_xpyp_term_ta_pdf_rhs_godunov"...
rhs_ta = f2py_xpyp_term_ta_pdf_rhs_godunov(term_wpxpyp_explicit_zm,invrs_rho_ds_zm,sgn_turbulent_vel,rho_ds_zm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_sfc_varnce"...
wp2,up2,vp2,thlp2,rtp2,rtpthlp,sclrp2,sclrprtp,sclrpthlp = f2py_calc_sfc_varnce(sclr_dim,dt,sfc_elevation,upwp_sfc,vpwp_sfc,wpthlp,wprtp_sfc,um,vm,lscale_up,wpsclrp_sfc,lhs_splat_wp2,tau_zm,l_vary_convect_depth,t0,up2_sfc_coef,a_const,wp2,up2,vp2,thlp2,rtp2,rtpthlp,sclrp2,sclrprtp,sclrpthlp,[nzm,nzt,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_stats_accumulate"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
f2py_stats_accumulate(sclr_dim,edsclr_dim,dt,l_implemented,l_host_applies_sfc_fluxes,l_stability_correct_tau_zm,clubb_params,um,vm,upwp,vpwp,up2,vp2,thlm,rtm,thlm_before,rtm_before,thlm_forcing,rtm_forcing,wpthlp_sfc,wprtp_sfc,wprtp,wpthlp,wp2,wp3,rtp2,rtp3,thlp2,thlp3,rtpthlp,p_in_pa,exner,rho,rho_zm,rho_ds_zm,rho_ds_zt,thv_ds_zm,thv_ds_zt,wm_zt,wm_zm,rcm,cloud_frac,thvm,ug,vg,ddzt_umvm_sqd,stability_correction,kh_zt,rsat,kh_zm,em,sclrm,sclrp2,sclrprtp,sclrpthlp,sclrm_forcing,wpsclrp,wpedsclrp,edsclrm,edsclrm_forcing,saturation_formula,[nzm,nzt,ngrdcol,sclr_dim_transport,edsclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_pdf_closure_driver"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
rtm,rcm,cloud_frac,ice_supersat_frac,wprcp,sigma_sqd_w,wpthvp,wp2thvp,wp2up,rtpthvp,thlpthvp,rc_coef,rcm_in_layer,cloud_cover,rcp2_zt,thlprcp,rc_coef_zm,sclrpthvp,wpup2,wpvp2,wp2up2,wp2vp2,wp4,wp2rtp,wprtp2,wp2thlp,wpthlp2,wprtpthlp,wp2rcp,rtprcp,rcp2,uprcp,vprcp,w_up_in_cloud,w_down_in_cloud,cloudy_updraft_frac,cloudy_downdraft_frac,skw_velocity,cloud_frac_zm,ice_supersat_frac_zm,rtm_zm,thlm_zm,rcm_zm,rcm_supersat_adj,wp2sclrp,wpsclrp2,sclrprcp,wpsclrprtp,wpsclrpthlp = f2py_pdf_closure_driver(dt,hydromet_dim,sclr_dim,sclr_tol,wprtp,thlm,wpthlp,rtp2,rtp3,thlp2,thlp3,rtpthlp,wp2,wp3,wm_zm,wm_zt,um,up2,upwp,up3,vm,vp2,vpwp,vp3,p_in_pa,exner,thv_ds_zm,thv_ds_zt,rtm_ref,wphydrometp,wp2hmp,rtphmp_zt,thlphmp_zt,sclrm,wpsclrp,sclrp2,sclrprtp,sclrpthlp,sclrp3,p_sfc,l_samp_stats_in_pdf_call,mixt_frac_max_mag,ts_nudge,rtm_min,rtm_nudge_max_altitude,clubb_params,iipdf_type,saturation_formula,l_rtm_nudge,l_trapezoidal_rule_zt,l_trapezoidal_rule_zm,l_call_pdf_closure_twice,l_use_cloud_cover,l_rcm_supersat_adj,l_mix_rat_hm,rtm,sigma_sqd_w,[nzm,nzt,ngrdcol,hydromet_dim_transport,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_turb_adv_range"...
low_lev_effect,high_lev_effect = f2py_calc_turb_adv_range(nzt,dt,w_1_zm,w_2_zm,varnce_w_1_zm,varnce_w_2_zm,mixt_frac_zm,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_monotonic_turbulent_flux_limit"...
xm,wpxp = f2py_monotonic_turbulent_flux_limit(solve_type,dt,xm_old,xp2,wm_zt,xm_forcing,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,xp2_threshold,xm_tol,l_implemented,low_lev_effect,high_lev_effect,tridiag_solve_method,l_upwind_xm_ma,l_mono_flux_lim_spikefix,xm,wpxp,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_precip_fraction"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
precip_frac,precip_frac_1,precip_frac_2,precip_frac_tol = f2py_precip_fraction(hydromet_dim,hydromet,cloud_frac,cloud_frac_1,l_mix_rat_hm,l_frozen_hm,hydromet_tol,cloud_frac_2,ice_supersat_frac,ice_supersat_frac_1,ice_supersat_frac_2,mixt_frac,clubb_params,[nzt,ngrdcol,hydromet_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_params_ly93"...
mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd = f2py_calc_params_ly93(xm,xp2,skx,mixt_frac,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_ly93_driver"...
mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,mixt_frac = f2py_ly93_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,skrt,skthl,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_setter_var_params"...
mu_x_1,mu_x_2,sigma_x_1,sigma_x_2,mixt_frac,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calc_setter_var_params(xm,xp2,skx,sgn_wpxp,f_x,zeta_x,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_responder_params"...
mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calc_responder_params(xm,xp2,skx,sgn_wpxp,f_x,mixt_frac,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_limits_f_x_responder"...
min_f_x,max_f_x = f2py_calc_limits_f_x_responder(mixt_frac,skx,sgn_wpxp,max_skx2_pos_skx_sgn_wpxp,max_skx2_neg_skx_sgn_wpxp,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_l_x_skx_fnc"...
big_l_x_1,big_l_x_2 = f2py_calc_l_x_skx_fnc(skx,sgn_wpxp,small_l_x_1,small_l_x_2)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_setter_parameters_tsdadg"...
mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd,mixt_frac,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calc_setter_parameters_tsdadg(xm,xp2,skx,sgn_wpxp,big_l_x_1,big_l_x_2)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_coef_wp4_implicit"...
coef_wp4_implicit = f2py_calc_coef_wp4_implicit(mixt_frac,f_w,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_coef_wpxp2_implicit"...
coef_wpxp2_implicit = f2py_calc_coef_wpxp2_implicit(wp2,xp2,wpxp,sgn_wpxp,mixt_frac,f_w,f_x,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_coefs_wp2xp_semiimpl"...
coef_wp2xp_implicit,term_wp2xp_explicit = f2py_calc_coefs_wp2xp_semiimpl(wp2,xp2,sgn_wpxp,mixt_frac,f_w,f_x,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_coefs_wpxpyp_semiimpl"...
coef_wpxpyp_implicit,term_wpxpyp_explicit = f2py_calc_coefs_wpxpyp_semiimpl(wp2,xp2,yp2,wpxp,wpyp,sgn_wpxp,sgn_wpyp,mixt_frac,f_w,f_x,f_y,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd,coef_sigma_y_1_sqd,coef_sigma_y_2_sqd,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_luhar_params"...
mixt_frac,big_m,small_m = f2py_calc_luhar_params(skx,wpxp,xp2,x_tol_sqd,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_close_luhar_pdf"...
sigma_sqd_x_1,sigma_sqd_x_2,varnce_x_1,varnce_x_2,x_1_n,x_2_n,x_1,x_2 = f2py_close_luhar_pdf(xm,xp2,mixt_frac,small_m,wpxp,x_tol_sqd,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_adg1_w_closure"...
w_1,w_2,w_1_n,w_2_n,varnce_w_1,varnce_w_2,mixt_frac = f2py_adg1_w_closure(wm,wp2,skw,sigma_sqd_w,sqrt_wp2,mixt_frac_max_mag,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_tsdadg_pdf_driver"...
mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,mixt_frac = f2py_tsdadg_pdf_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,skrt,skthl,wprtp,wpthlp,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_adg2_pdf_driver"...
w_1,w_2,rt_1,rt_2,thl_1,thl_2,varnce_w_1,varnce_w_2,varnce_rt_1,varnce_rt_2,varnce_thl_1,varnce_thl_2,mixt_frac,alpha_rt,alpha_thl,sigma_sqd_w,sclr_1,sclr_2,varnce_sclr_1,varnce_sclr_2,alpha_sclr = f2py_adg2_pdf_driver(sclr_dim,sclr_tol,wm,rtm,thlm,wp2,rtp2,thlp2,skw,wprtp,wpthlp,sqrt_wp2,beta,sclrm,sclrp2,wpsclrp,l_scalar_calc,[nz,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_adg1_pdf_driver"...
w_1,w_2,rt_1,rt_2,thl_1,thl_2,u_1,u_2,v_1,v_2,varnce_w_1,varnce_w_2,varnce_rt_1,varnce_rt_2,varnce_thl_1,varnce_thl_2,varnce_u_1,varnce_u_2,varnce_v_1,varnce_v_2,mixt_frac,alpha_rt,alpha_thl,alpha_u,alpha_v,sclr_1,sclr_2,varnce_sclr_1,varnce_sclr_2,alpha_sclr = f2py_adg1_pdf_driver(sclr_dim,sclr_tol,wm,rtm,thlm,um,vm,wp2,rtp2,thlp2,up2,vp2,skw,wprtp,wpthlp,upwp,vpwp,sqrt_wp2,sigma_sqd_w,beta,mixt_frac_max_mag,sclrm,sclrp2,wpsclrp,l_scalar_calc,[nz,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_luhar_3d_pdf_driver"...
w_1,w_2,rt_1,rt_2,thl_1,thl_2,varnce_w_1,varnce_w_2,varnce_rt_1,varnce_rt_2,varnce_thl_1,varnce_thl_2,mixt_frac = f2py_luhar_3d_pdf_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,skrt,skthl,wprtp,wpthlp,[nz])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calculate_w_params"...
mu_w_1,mu_w_2,sigma_w_1,sigma_w_2,mixt_frac,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd = f2py_calculate_w_params(wm,wp2,skw,f_w,zeta_w)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calculate_responder_params"...
mu_x_1,mu_x_2,sigma_x_1_sqd,sigma_x_2_sqd,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd = f2py_calculate_responder_params(xm,xp2,skx,wpxp,wp2,f_w,mixt_frac)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calculate_coef_wp4_implicit"...
coef_wp4_implicit = f2py_calculate_coef_wp4_implicit(mixt_frac,f_w,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_coef_wp2xp_implicit"...
coef_wp2xp_implicit = f2py_calc_coef_wp2xp_implicit(wp2,mixt_frac,f_w,coef_sigma_w_1_sqd,coef_sigma_w_2_sqd)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_coefs_wpxp2_semiimpl"...
coef_wpxp2_implicit,term_wpxp2_explicit = f2py_calc_coefs_wpxp2_semiimpl(wp2,wpxp,mixt_frac,f_w,coef_sigma_x_1_sqd,coef_sigma_x_2_sqd)
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_new_pdf_driver"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
skrt,skthl,mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,mixt_frac = f2py_new_pdf_driver(wm,rtm,thlm,wp2,rtp2,thlp2,skw,wprtp,wpthlp,rtpthlp,clubb_params,skrt,skthl,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_new_hybrid_pdf_driver"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
skrt,skthl,sku,skv,sksclr,mu_w_1,mu_w_2,mu_rt_1,mu_rt_2,mu_thl_1,mu_thl_2,mu_u_1,mu_u_2,mu_v_1,mu_v_2,sigma_w_1_sqd,sigma_w_2_sqd,sigma_rt_1_sqd,sigma_rt_2_sqd,sigma_thl_1_sqd,sigma_thl_2_sqd,sigma_u_1_sqd,sigma_u_2_sqd,sigma_v_1_sqd,sigma_v_2_sqd,mu_sclr_1,mu_sclr_2,sigma_sclr_1_sqd,sigma_sclr_2_sqd,mixt_frac,sigma_sqd_w = f2py_new_hybrid_pdf_driver(sclr_dim,wm,rtm,thlm,um,vm,wp2,rtp2,thlp2,up2,vp2,skw,wprtp,wpthlp,upwp,vpwp,sclrm,sclrp2,wpsclrp,clubb_params,slope_coef_spread_dg_means_w,pdf_component_stdev_factor_w,skrt,skthl,sku,skv,sksclr,[nz,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_compute_sigma_sqd_w"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
sigma_sqd_w = f2py_compute_sigma_sqd_w(wp3,wp2,thlp2,rtp2,up2,vp2,wpthlp,wprtp,upwp,vpwp,clubb_params,l_predict_upwp_vpwp,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_fill_holes_vertical"...
field = f2py_fill_holes_vertical(threshold,lower_hf_level,upper_hf_level,dz,rho_ds,grid_dir_indx,fill_holes_type,field,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_fill_holes_wp2_from_horz_tke"...
wp2,up2,vp2 = f2py_fill_holes_wp2_from_horz_tke(threshold,lower_hf_level,upper_hf_level,wp2,up2,vp2,[nz,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_clip_rcm"...
rcm = f2py_clip_rcm(rtm,message,rcm,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_clip_covar"...
xpyp,xpyp_chnge = f2py_clip_covar(solve_type,xp2,yp2,xpyp,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_clip_variance"...
xp2 = f2py_clip_variance(solve_type,dt,threshold_lo,xp2,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_pos_definite_adj"...
field_np1,flux_np1,field_pd,flux_pd = f2py_pos_definite_adj(dt,field_np1,flux_np1,field_n,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_clip_skewness"...
wp3 = f2py_clip_skewness(dt,sfc_elevation,skw_max_mag,wp2_zt,l_use_wp3_lim_with_smth_heaviside,wp3,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_clip_covars_denom"...
wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,wprtp,wpthlp,upwp,vpwp,wpsclrp,upwp_pert,vpwp_pert = f2py_clip_covars_denom(sclr_dim,dt,rtp2,thlp2,up2,vp2,wp2,sclrp2,l_linearize_pbl_winds,l_predict_upwp_vpwp,wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,wprtp,wpthlp,upwp,vpwp,wpsclrp,upwp_pert,vpwp_pert,[nzm,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_brunt_vaisala_freq_sqd"...
brunt_vaisala_freq_sqd,brunt_vaisala_freq_sqd_mixed,brunt_vaisala_freq_sqd_smth = f2py_calc_brunt_vaisala_freq_sqd(nzm,thlm,exner,rtm,rcm,p_in_Pa,thvm,ice_supersat_frac,saturation_formula,l_brunt_vaisala_freq_moist,l_use_thvm_in_bv_freq,l_modify_limiters_for_cnvg_test,bv_efold,T0,[nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_compute_cx_fnc_richardson"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
Cx_fnc_Richardson = f2py_compute_cx_fnc_richardson(nzt,Lscale_zm,ddzt_umvm_sqd,rho_ds_zm,brunt_vaisala_freq_sqd,brunt_vaisala_freq_sqd_mixed,clubb_params,l_use_shear_Richardson,l_modify_limiters_for_cnvg_test,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_stability_correction"...
stability_correction = f2py_calc_stability_correction(brunt_vaisala_freq_sqd,lscale_zm,em,lambda0_stability_coef,[nzm,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_lscale"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
invrs_tau_zt,invrs_tau_zm,invrs_tau_xp2_zm,invrs_tau_wp3_zt,invrs_tau_c1_zm,invrs_tau_c4_zm,invrs_tau_c6_zm,invrs_tau_c14_zm,tau_max_zm,tau_max_zt,tau_zm,lscale,lscale_zm,lscale_up,lscale_down = f2py_calc_lscale(l_implemented,host_dx,host_dy,p_in_pa,exner,rtm,thlm,thvm,thlp2,rtp2,rtpthlp,em,thv_ds_zt,lmin,upwp_sfc,vpwp_sfc,ddzt_umvm_sqd,ice_supersat_frac,ufmin,tau_const,sfc_elevation,clubb_params,saturation_formula,l_lscale_plume_centered,lscale_method,l_e3sm_config,l_smooth_heaviside_tau_wpxp,l_modify_limiters_for_cnvg_test,l_use_invrs_tau_n2_iso,brunt_vaisala_freq_sqd_smth,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_diagnose_lscale_from_tau"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
invrs_tau_zt,invrs_tau_zm,invrs_tau_sfc,invrs_tau_no_n2_zm,invrs_tau_bkgnd,invrs_tau_shear,invrs_tau_n2_iso,invrs_tau_wp2_zm,invrs_tau_xp2_zm,invrs_tau_wp3_zm,invrs_tau_wp3_zt,invrs_tau_wpxp_zm,tau_max_zm,tau_max_zt,tau_zm,tau_zt,lscale,lscale_up,lscale_down = f2py_diagnose_lscale_from_tau(upwp_sfc,vpwp_sfc,ddzt_umvm_sqd,ice_supersat_frac,em,sqrt_em_zt,ufmin,tau_const,sfc_elevation,lscale_max,clubb_params,l_e3sm_config,l_smooth_heaviside_tau_wpxp,brunt_vaisala_freq_sqd_smth,ri_zm,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_calc_lscale_directly"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
lscale,lscale_up,lscale_down = f2py_calc_lscale_directly(l_implemented,p_in_pa,exner,rtm,thlm,thvm,rtp2_zt,thlp2_zt,rtpthlp_zt,em,thv_ds_zt,lscale_max,lmin,clubb_params,saturation_formula,l_lscale_plume_centered,lscale_method,[ngrdcol,nzm,nzt])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_advance_xp3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
rtp3,thlp3,sclrp3,up3,vp3 = f2py_advance_xp3(sclr_dim,sclr_tol,dt,rtm,thlm,rtp2,thlp2,wprtp,wpthlp,wprtp2,wpthlp2,rho_ds_zm,invrs_rho_ds_zt,invrs_tau_zt,tau_max_zt,sclrm,sclrp2,wpsclrp,wpsclrp2,wp2,wp3,upwp,vpwp,up2,vp2,thvm,clubb_params,l_lmm_stepping,rtp3,thlp3,sclrp3,up3,vp3,[nzm,nzt,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_diagnose_xp3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
rtp3,thlp3,up3,vp3,sclrp3 = f2py_diagnose_xp3(sclr_dim,sclr_tol,iipdf_type,clubb_params,wp2,wp3,thvm,wprtp,wpthlp,rtp2,thlp2,upwp,vpwp,up2,vp2,sigma_sqd_w,wpsclrp,sclrp2,rtp3,thlp3,up3,vp3,sclrp3,[nzm,nzt,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_advance_wp2_wp3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
up2,vp2,wp2,wp3 = f2py_advance_wp2_wp3(dt,sfc_elevation,fcor_y,sigma_sqd_w,wm_zm,wm_zt,wpup2,wpvp2,wp2up2,wp2vp2,wp4,wpthvp,wp2thvp,wp2up,um,vm,upwp,vpwp,em,kh_zm,kh_zt,invrs_tau_c4_zm,invrs_tau_wp3_zt,invrs_tau_c1_zm,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,thv_ds_zt,mixt_frac,cx_fnc_richardson,lhs_splat_wp2,lhs_splat_wp3,wprtp,wpthlp,rtp2,thlp2,clubb_params,iipdf_type,penta_solve_method,fill_holes_type,l_min_wp2_from_corr_wx,l_upwind_xm_ma,l_standard_term_ta,l_partial_upwind_wp3,l_damp_wp2_using_em,l_use_c11_richardson,l_damp_wp3_skw_squared,l_lmm_stepping,l_use_tke_in_wp3_pr_turb_term,l_use_tke_in_wp2_wp3_k_dfsn,l_use_wp3_lim_with_smth_heaviside,l_wp2_fill_holes_tke,l_ho_nontrad_coriolis,up2,vp2,wp2,wp3,[nzm,nzt,ngrdcol])
The Meson build system
Version: 1.12.1
Source dir: /tmp/tmpglcpttcj
Build dir: /tmp/tmpglcpttcj/bbdir
Build type: native build
Project name: clubb_f2py
Project version: 0.1
Fortran compiler for the host machine: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran (gcc 13.1.0 "GNU Fortran (Spack GCC) 13.1.0")
Fortran linker for the host machine: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gfortran ld.bfd 2.42
C compiler for the host machine: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc (gcc 13.1.0 "gcc (Spack GCC) 13.1.0")
C linker for the host machine: /usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/gcc-13.1.0-uswx4gd4eee2bf3orriqppfr4j25x4li/bin/gcc ld.bfd 2.42
Host machine cpu family: x86_64
Host machine cpu: x86_64
Compiler for C supports arguments -fno-strict-aliasing: YES
Program /home/jenkins/workspace/clubb_branch_jax/.venv-python/bin/python found: YES (/home/jenkins/workspace/clubb_branch_jax/.venv-python/bin/python)
Found pkg-config: YES (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/pkgconf-2.2.0-5yfc5u2idq4y27sxxkurcul66iyq7axu/bin/pkg-config) 2.2.0
Run-time dependency python found: YES 3.12
Library quadmath found: YES
Build targets in project: 1
Found ninja-1.13.2.git.kitware.jobserver-pipe-1 at /home/jenkins/workspace/clubb_branch_jax/.venv-python/bin/ninja
ninja: Entering directory `/tmp/tmpglcpttcj/bbdir'
[1/6] Scanning target clubb_f2py.cpython-312-x86_64-linux-gnu for modules
[2/6] Generating dynamic dependency information for target clubb_f2py.cpython-312-x86_64-linux-gnu
[3/6] Compiling Fortran object clubb_f2py.cpython-312-x86_64-linux-gnu.so.p/clubb_f2py-f2pywrappers.f.o
[4/6] Compiling C object clubb_f2py.cpython-312-x86_64-linux-gnu.so.p/cc19eba000b55d5a789a80ff84aea214fc78ee66_.._.._f2py_src_fortranobject.c.o
[5/6] Compiling C object clubb_f2py.cpython-312-x86_64-linux-gnu.so.p/clubb_f2pymodule.c.o
[6/6] Linking target clubb_f2py.cpython-312-x86_64-linux-gnu.so
INFO: autodetecting backend as ninja
INFO: calculating backend command to run: /home/jenkins/workspace/clubb_branch_jax/.venv-python/bin/ninja -C /tmp/tmpglcpttcj/bbdir
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_advance_windm_edsclrm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
upwp_cl_num,vpwp_cl_num,um,vm,thlm,rtm,edsclrm,upwp,vpwp,wpedsclrp,um_pert,vm_pert,upwp_pert,vpwp_pert = f2py_advance_windm_edsclrm(edsclr_dim,dt,wm_zt,kh_zm,clubb_params,ug,vg,um_ref,vm_ref,wp2,up2,vp2,um_forcing,vm_forcing,edsclrm_forcing,p_in_pa,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zt,fcor,l_implemented,ts_nudge,tridiag_solve_method,l_predict_upwp_vpwp,l_upwind_xm_ma,l_uv_nudge,l_lmm_stepping,l_linearize_pbl_winds,l_do_expldiff_rtm_thlm,fill_holes_type,upwp_cl_num,vpwp_cl_num,um,vm,thlm,rtm,edsclrm,upwp,vpwp,wpedsclrp,um_pert,vm_pert,upwp_pert,vpwp_pert,[nzm,nzt,ngrdcol,edsclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_advance_xp2_xpyp"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
rtp2,thlp2,rtpthlp,up2,vp2,sclrp2,sclrprtp,sclrpthlp = f2py_advance_xp2_xpyp(sclr_dim,sclr_tol,invrs_tau_xp2_zm,invrs_tau_c4_zm,invrs_tau_c14_zm,wm_zm,rtm,wprtp,thlm,wpthlp,wpthvp,um,vm,wp2,wp2_zt,wp3,upwp,vpwp,sigma_sqd_w,wprtp2,wpthlp2,wprtpthlp,kh_zt,rtp2_forcing,thlp2_forcing,rtpthlp_forcing,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,thv_ds_zm,cloud_frac,dt,fcor_y,sclrm,wpsclrp,wpsclrp2,wpsclrprtp,wpsclrpthlp,lhs_splat_wp2,clubb_params,iipdf_type,tridiag_solve_method,fill_holes_type,l_ho_nontrad_coriolis,l_min_xp2_from_corr_wx,l_c2_cloud_frac,l_upwind_xpyp_ta,l_godunov_upwind_xpyp_ta,l_lmm_stepping,rtp2,thlp2,rtpthlp,up2,vp2,sclrp2,sclrprtp,sclrpthlp,[nzm,nzt,ngrdcol,sclr_dim_transport])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_update_xp2_mc"...
rtp2_mc,thlp2_mc,wprtp_mc,wpthlp_mc,rtpthlp_mc = f2py_update_xp2_mc(dt,cloud_frac,rcm,rvm,thlm,wm,exner,rrm_evap,rtp2_mc,thlp2_mc,wprtp_mc,wpthlp_mc,rtpthlp_mc,[nzm,nzt,ngrdcol])
Generating possibly empty wrappers"
Maybe empty "clubb_f2py-f2pywrappers.f"
Constructing wrapper function "f2py_advance_xm_wpxp"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,rtm,wprtp,thlm,wpthlp,sclrm,wpsclrp,um,upwp,vm,vpwp,um_pert,vm_pert,upwp_pert,vpwp_pert = f2py_advance_xm_wpxp(sclr_dim,sclr_tol,dt,sigma_sqd_w,wm_zm,wm_zt,wp2,lscale_zm,wp3,kh_zt,kh_zm,stability_correction,invrs_tau_c6_zm,tau_max_zm,wp2rtp,rtpthvp,rtm_forcing,wprtp_forcing,rtm_ref,wp2thlp,thlpthvp,thlm_forcing,wpthlp_forcing,thlm_ref,rho_ds_zm,rho_ds_zt,invrs_rho_ds_zm,invrs_rho_ds_zt,thv_ds_zm,rtp2,thlp2,w_1_zm,w_2_zm,varnce_w_1_zm,varnce_w_2_zm,mixt_frac_zm,l_implemented,em,wp2sclrp,sclrpthvp,sclrm_forcing,sclrp2,cx_fnc_richardson,um_forcing,vm_forcing,ug,vg,wpthvp,fcor,fcor_y,um_ref,vm_ref,up2,vp2,uprcp,vprcp,rc_coef_zm,clubb_params,ts_nudge,iipdf_type,penta_solve_method,tridiag_solve_method,fill_holes_type,l_predict_upwp_vpwp,l_ho_nontrad_coriolis,l_ho_trad_coriolis,l_diffuse_rtm_and_thlm,l_stability_correct_kh_n2_zm,l_godunov_upwind_wpxp_ta,l_upwind_xm_ma,l_uv_nudge,l_diag_lscale_from_tau,l_use_c7_richardson,l_lmm_stepping,l_enable_relaxed_clipping,l_linearize_pbl_winds,l_mono_flux_lim_thlm,l_mono_flux_lim_rtm,l_mono_flux_lim_um,l_mono_flux_lim_vm,l_mono_flux_lim_spikefix,wprtp_cl_num,wpthlp_cl_num,upwp_cl_num,vpwp_cl_num,rtm,wprtp,thlm,wpthlp,sclrm,wpsclrp,um,upwp,vm,vpwp,um_pert,vm_pert,upwp_pert,vpwp_pert,[nzm,nzt,ngrdcol,sclr_dim_transport])
Wrote C/API module "clubb_f2py" to file "./clubb_f2pymodule.c"
[1053/1054] Copying clubb_f2py extension into the build runtime directory
[1053/1054] Install the project...
-- Install configuration: "Debug"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/libclubb_driver_lib.a
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_tuner
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_tuner" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/G_unit_tests
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/G_unit_tests" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_thread_test
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_thread_test" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_driver_test
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_driver_test" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone_loss
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_standalone_loss" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_loss_driver_test
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/clubb_loss_driver_test" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/libclubb_f2py_backend.so
-- Set non-toolchain portion of runtime path of "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/libclubb_f2py_backend.so" to "/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib:/home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/lib64:/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-13.1.0/netcdf-fortran-4.5.3-ivafocv4fav4rj3ckswo6vj33utvtdir/lib"
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_f2py.cpython-312-x86_64-linux-gnu.so
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/clubb_standalone_loss.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/_runtime_loader.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/clubb_api.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/microphys.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/radiation.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/__init__.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/lapack_wrap.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_xp2_xpyp.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/lapack_interfaces.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/matrix_operations.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/adg1_adg2_3d_luhar_pdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/stats_netcdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/pdf_closure.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/clip_explicit.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/turbulent_adv_pdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_wp2_wp3.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/pos_definite_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/t_in_k_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/skx_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/new_tsdadg_pdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/pdf_parameter_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/penta_bicgstab_solver.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/numerical_check.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_xp3.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/model_flags.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/remapping_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/grid_class.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/loss_driver.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/mean_adv.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/new_hybrid_pdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/new_hybrid_pdf_main.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_xm_wpxp.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/calc_pressure.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/calendar.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/interpolation.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/stats_clubb_utilities.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/calc_roots.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/sigma_sqd_w_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/precipitation_fraction.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/saturation.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/nc_ncn_eqns.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/mixing_length.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/ly93_pdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/fill_holes.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/parameters_tunable.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/index_mapping.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/penta_lu_solver.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/tridiag_lu_solver.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/__init__.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/file_functions.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/sponge_layer_damping.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/diagnose_correlations_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/sfc_varnce_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/diffusion.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/new_pdf.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/err_info_type_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_clubb_core.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_windm_edsclrm.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/advance_helper.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/pdf_utilities.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/new_pdf_main.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/matrix_solver_wrapper.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/corr_varnce_module.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/error_code.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/mono_flux_limiter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/CLUBB_core/array_index.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/string_conversion.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/prescribe_forcings.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/config_flags_converter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/err_info.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/nu_vert_res_dep_converter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/nu_vert_res_dep.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/grid_class.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/sclr_idx_converter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/err_info_converter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/config_flags.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/pdf_params.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/grid_class_converter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/hm_metadata.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/__init__.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/sclr_idx.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/common.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/clubb_python/derived_types/pdf_params_converter.py
-- Installing: /home/jenkins/workspace/clubb_branch_jax/install/gcc_DEBUG_PRECdouble_PYTHON/python/utilities/loss_metrics.py
CLUBBStandardsCheck.py: beginning check on src
PASS: 0 checks failed for src
CLUBBStandardsCheck.py: beginning check on src/CLUBB_core
PASS: 0 checks failed for src/CLUBB_core
CLUBBStandardsCheck.py: beginning check on src/SILHS
PASS: 0 checks failed for src/SILHS
CLUBBStandardsCheck.py: beginning check on src/Benchmark_cases
PASS: 0 checks failed for src/Benchmark_cases
CLUBBStandardsCheck.py: beginning check on src/Radiation
PASS: 0 checks failed for src/Radiation
CLUBBStandardsCheck.py: beginning check on src/Microphys
PASS: 0 checks failed for src/Microphys
CLUBBStandardsCheck.py: beginning check on src/Microphys/KK_microphys
PASS: 0 checks failed for src/Microphys/KK_microphys
CLUBBStandardsCheck.py: beginning check on src/G_unit_test_types
PASS: 0 checks failed for src/G_unit_test_types
[92mBuild completed successfully, and all source code checks passed.[0m
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run JAX pytests)
[Pipeline] catchError
[Pipeline] {
[Pipeline] sh
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-gzedt3f (required by: mpich/4.2.1, hdf5/1.14.3-42x3zrv,
netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ bash tests/run_pytests.sh -jax -include_generated -v --durations=15 --junitxml=/home/jenkins/workspace/clubb_branch_jax/output/tests/pytests/jax.xml
==> Creating JAX virtualenv with existing Python 3.12
==> Installing uv 0.11.32 in /home/jenkins/workspace/clubb_branch_jax/.clubb-jax-tools/bin
downloading uv 0.11.32 x86_64-unknown-linux-gnu
installing to /home/jenkins/workspace/clubb_branch_jax/.clubb-jax-tools/bin
uv
uvx
everything's installed!
==> uv is ready: uv 0.11.32 (x86_64-unknown-linux-gnu)
Using CPython 3.12.3 interpreter at: /usr/bin/python3.12
Creating virtual environment at: .venv-jax
Activate with: source .venv-jax/bin/activate
==> Installing JAX 0.11.0 (cpu) and requirements from /home/jenkins/workspace/clubb_branch_jax/clubb_jax/requirements.txt
Using Python 3.12.3 environment at: .venv-jax
Resolved 15 packages in 290ms
Downloading pygments (1.2MiB)
Downloading netcdf4 (10.1MiB)
Downloading jax (3.1MiB)
Downloading cftime (1.6MiB)
Downloading scipy (33.7MiB)
Downloading jaxlib (83.2MiB)
Downloading numpy (16.0MiB)
Downloaded cftime
Downloaded pygments
Downloaded netcdf4
Downloaded jax
Downloaded numpy
Downloaded jaxlib
Downloaded scipy
Prepared 15 packages in 2.51s
Installed 15 packages in 40ms
+ certifi==2026.10.19
+ cftime==1.6.6.1
+ iniconfig==2.3.1
+ jax==0.11.0
+ jaxlib==0.11.0
+ ml-dtypes==0.6.0
+ netcdf4==1.7.5
+ numpy==2.5.4
+ opt-einsum==3.4.0
+ packaging==26.3
+ pluggy==1.7.0
+ pygments==2.21.0
+ pytest==9.1.1
+ scipy==1.18.1
+ tabulate==0.10.0
CLUBB JAX runtime:
Environment: /home/jenkins/workspace/clubb_branch_jax/.venv-jax (Python 3.12)
Accelerator: cpu
JAX: 0.11.0 (jaxlib 0.11.0)
Device: cpu:0
============================= test session starts ==============================
platform linux -- Python 3.12.3, pytest-9.1.1, pluggy-1.7.0 -- /home/jenkins/workspace/clubb_branch_jax/.venv-jax/bin/python
cachedir: .pytest_cache
rootdir: /home/jenkins/workspace/clubb_branch_jax
collecting ... collected 871 items
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clubb_jax/pytests/auto_llm_generated_pytests/test_fill_holes_global.py::test_mass_conservation_and_no_holes PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_fill_holes_mean.py::test_mean_fill_raises_dry_top_and_conserves_mass PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_fill_holes_mean.py::test_mean_fill_noop_when_all_above_threshold PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_fill_holes_sliding_window.py::test_conservation_and_no_holes PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_fill_holes_sliding_window.py::test_no_holes_is_noop PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_forcing_port_structure.py::test_device_physics_does_not_import_numpy_or_raw_f2py PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gabls3_night_stability.py::test_gm1_gh1_unstable_regime PASSED [ 30%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gabls3_night_stability.py::test_fm1_fh1_formula PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gabls3_night_stability.py::test_landflx_stable_default_real_boundaries PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gabls3_night_stability.py::test_gh1_called_domain PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gabls3_night_stability.py::test_psi_h_stable PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gfdl_activation.py::test_disabled_activation_interfaces_cannot_simulate[aer_act_clubb_quadrature_Gauss] PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gfdl_activation.py::test_disabled_activation_interfaces_cannot_simulate[erff] PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gfdl_activation.py::test_disabled_activation_interfaces_cannot_simulate[Loading] PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_gfdl_activation.py::test_disabled_activation_interfaces_cannot_simulate[get_unit] PASSED [ 31%]
clubb_jax/pytests/auto_llm_generated_pytests/test_grid_operators.py::test_descending_grid_rejected PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_hydromet_pdf_parameter.py::test_hydromet_pdf_params_zero PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_hydromet_pdf_parameter.py::test_precip_fracs_init_and_zero PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_hydrometeor_mixed_moments.py::test_driver_vs_literal_loop PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_hydrometp2_zt.py::test_matches_f90_formula PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_hydrometp2_zt.py::test_safe_division_and_in_cloud_limit PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_ice_dfsn.py::test_ice_dfsn_vs_numpy PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_ice_dfsn.py::test_branches_and_coupling PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_ice_dfsn.py::test_over_depletion_cap PASSED [ 32%]
clubb_jax/pytests/auto_llm_generated_pytests/test_ice_dfsn.py::test_columns_use_their_own_grid_spacing_eager_and_jit PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_index_mapping.py::test_warm_rain_only_pdf PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_index_mapping.py::test_absent_species_guard PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_index_mapping.py::test_full_species PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_index_mapping.py::test_sclr_idx_fields_mirror_fortran_type PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_interpolation.py::test_lin_interp_identity PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_interpolation.py::test_monotonicity PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_interpolation.py::test_linear_interp_factor PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_interpolation.py::test_zlinterp PASSED [ 33%]
clubb_jax/pytests/auto_llm_generated_pytests/test_interpolation.py::test_lin_interp_between_grids Aborted by agent_dev
Sending interrupt signal to process
Terminated
[Pipeline] }
[Pipeline] // catchError
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (JAX F2PY unit tests)
Stage "JAX F2PY unit tests" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Expected failure test)
Stage "Expected failure test" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Jax vs Fortran: standard stats)
Stage "Jax vs Fortran: standard stats" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run Jax Python vs Fortran cases w varying flags)
Stage "Run Jax Python vs Fortran cases w varying flags" skipped due to earlier failure(s)
[Pipeline] getContext
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Declarative: Post Actions)
[Pipeline] junit
Recording test results
No test report files were found. Configuration error?
None of the test reports contained any result
[Checks API] No suitable checks publisher found.
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
org.jenkinsci.plugins.workflow.actions.ErrorAction$ErrorId: 14232dd8-b2a9-495f-8c70-7ba9dc1b4370
Finished: ABORTED
