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Started by an SCM change
Obtained jenkins_tests/clubb_BFB_r8029_flags_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git
[Pipeline] Start of Pipeline
[Pipeline] node
Running on nelson in /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Declarative: Checkout SCM)
[Pipeline] checkout
The recommended git tool is: git
Cloning the remote Git repository
Cloning repository https://github.com/larson-group/clubb.git
 > git init /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test # timeout=10
Fetching upstream changes from https://github.com/larson-group/clubb.git
 > git --version # timeout=10
 > git --version # 'git version 2.34.1'
 > git fetch --tags --force --progress -- https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Avoid second fetch
Checking out Revision ec720a8fe4132c9af37967fd3060080097b13182 (refs/remotes/origin/master)
 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f ec720a8fe4132c9af37967fd3060080097b13182 # timeout=10
Commit message: "Updating script usage in plot tests."
 > git rev-list --no-walk f2ae5b70703e3a86d145983b4fea098cbb8925a3 # timeout=10
Cleaning workspace
[Pipeline] }
[Pipeline] // stage
[Pipeline] withEnv
[Pipeline] {
[Pipeline] stage
[Pipeline] { (Update sys_admin Repo)
[Pipeline] sh
+ git -C /home/pub/jenkins_BFB_test_configs/sys_admin pull
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -ffdx # timeout=10
Already up to date.
[Pipeline] }
[Pipeline] // stage
[Pipeline] stage
[Pipeline] { (Run Python Test)
[Pipeline] sh
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-qorv6nkkjzyzntx6wbjupmoxrot26t6r/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-cb5lzz7,
netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-cb5lzz7, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------



Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_r8029_flags_gfortran_test_config
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_gfdlact.a
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:2336:8:

 2336 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter 'one' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/grid_class.F90:1994:8:

 1994 |     use constants_clubb, only: &
      |        1
Warning: Unused parameter 'one' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/input_reader.F90:498:28:

  491 |     do i=1, dim_grid
      |                    2        
......
  498 |         if ( grid(i) < grid(i-1) ) then
      |                            1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/mono_flux_limiter.F90:456:9:

  456 |       tmp, &
      |         1
Warning: Unused variable 'tmp' declared at (1) [-Wunused-variable]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1039:65:

 1039 |                                         rcm_in_layer, cloud_cover, w_up_in_cloud, w_down_in_cloud, &
      |                                                                 1
Warning: Unused dummy argument 'cloud_cover' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1040:82:

 1040 |                                         cloudy_updraft_frac, cloudy_downdraft_frac, wprcp, &
      |                                                                                  1
Warning: Unused dummy argument 'cloudy_downdraft_frac' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1040:59:

 1040 |                                         cloudy_updraft_frac, cloudy_downdraft_frac, wprcp, &
      |                                                           1
Warning: Unused dummy argument 'cloudy_updraft_frac' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1038:95:

 1038 |                                         wp2vp2, um_pert, vm_pert, upwp_pert, vpwp_pert, edsclrm, &
      |                                                                                               1
Warning: Unused dummy argument 'edsclrm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1035:54:

 1035 |                                         p_in_Pa, exner, rcm, cloud_frac, wp2thvp, wpthvp, rtpthvp, &
      |                                                      1
Warning: Unused dummy argument 'exner' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1037:57:

 1037 |                                         ice_supersat_frac, uprcp, vprcp, rc_coef_zm, wp4, wp2up2, &
      |                                                         1
Warning: Unused dummy argument 'ice_supersat_frac' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1041:52:

 1041 |                                         invrs_tau_zm, Kh_zt, Kh_zm, thlprcp )
      |                                                    1
Warning: Unused dummy argument 'invrs_tau_zm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1041:66:

 1041 |                                         invrs_tau_zm, Kh_zt, Kh_zm, thlprcp )
      |                                                                  1
Warning: Unused dummy argument 'kh_zm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1041:59:

 1041 |                                         invrs_tau_zm, Kh_zt, Kh_zm, thlprcp )
      |                                                           1
Warning: Unused dummy argument 'kh_zt' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1059:8:

 1059 |     use netcdf, only: &
      |        1
Warning: Unused parameter 'nf90_float' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1059:8:

 1059 |     use netcdf, only: &
      |        1
Warning: Unused parameter 'nf90_noerr' which has been explicitly imported at (1) [-Wunused-parameter]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1035:47:

 1035 |                                         p_in_Pa, exner, rcm, cloud_frac, wp2thvp, wpthvp, rtpthvp, &
      |                                               1
Warning: Unused dummy argument 'p_in_pa' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1037:83:

 1037 |                                         ice_supersat_frac, uprcp, vprcp, rc_coef_zm, wp4, wp2up2, &
      |                                                                                   1
Warning: Unused dummy argument 'rc_coef_zm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1039:52:

 1039 |                                         rcm_in_layer, cloud_cover, w_up_in_cloud, w_down_in_cloud, &
      |                                                    1
Warning: Unused dummy argument 'rcm_in_layer' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1032:73:

 1032 |                                         um, vm, up3, vp3, rtm, thlm, rtp3, thlp3, wp3, upwp, vpwp, &
      |                                                                         1
Warning: Unused dummy argument 'rtp3' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1035:97:

 1035 |                                         p_in_Pa, exner, rcm, cloud_frac, wp2thvp, wpthvp, rtpthvp, &
      |                                                                                                 1
Warning: Unused dummy argument 'rtpthvp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1034:45:

 1034 |                                         sclrm, sclrp3, wpsclrp, sclrp2, sclrprtp, sclrpthlp, &
      |                                             1
Warning: Unused dummy argument 'sclrm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1034:70:

 1034 |                                         sclrm, sclrp3, wpsclrp, sclrp2, sclrprtp, sclrpthlp, &
      |                                                                      1
Warning: Unused dummy argument 'sclrp2' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1034:53:

 1034 |                                         sclrm, sclrp3, wpsclrp, sclrp2, sclrprtp, sclrpthlp, &
      |                                                     1
Warning: Unused dummy argument 'sclrp3' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1034:80:

 1034 |                                         sclrm, sclrp3, wpsclrp, sclrp2, sclrprtp, sclrpthlp, &
      |                                                                                1
Warning: Unused dummy argument 'sclrprtp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1034:91:

 1034 |                                         sclrm, sclrp3, wpsclrp, sclrp2, sclrprtp, sclrpthlp, &
      |                                                                                           1
Warning: Unused dummy argument 'sclrpthlp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1036:59:

 1036 |                                         thlpthvp, sclrpthvp, wp2rtp, wp2thlp, wpup2, wpvp2, &
      |                                                           1
Warning: Unused dummy argument 'sclrpthvp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1032:80:

 1032 |                                         um, vm, up3, vp3, rtm, thlm, rtp3, thlp3, wp3, upwp, vpwp, &
      |                                                                                1
Warning: Unused dummy argument 'thlp3' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1041:75:

 1041 |                                         invrs_tau_zm, Kh_zt, Kh_zm, thlprcp )
      |                                                                           1
Warning: Unused dummy argument 'thlprcp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1036:48:

 1036 |                                         thlpthvp, sclrpthvp, wp2rtp, wp2thlp, wpup2, wpvp2, &
      |                                                1
Warning: Unused dummy argument 'thlpthvp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1032:42:

 1032 |                                         um, vm, up3, vp3, rtm, thlm, rtp3, thlp3, wp3, upwp, vpwp, &
      |                                          1
Warning: Unused dummy argument 'um' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1038:55:

 1038 |                                         wp2vp2, um_pert, vm_pert, upwp_pert, vpwp_pert, edsclrm, &
      |                                                       1
Warning: Unused dummy argument 'um_pert' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1032:51:

 1032 |                                         um, vm, up3, vp3, rtm, thlm, rtp3, thlp3, wp3, upwp, vpwp, &
      |                                                   1
Warning: Unused dummy argument 'up3' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1037:64:

 1037 |                                         ice_supersat_frac, uprcp, vprcp, rc_coef_zm, wp4, wp2up2, &
      |                                                                1
Warning: Unused dummy argument 'uprcp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1038:75:

 1038 |                                         wp2vp2, um_pert, vm_pert, upwp_pert, vpwp_pert, edsclrm, &
      |                                                                           1
Warning: Unused dummy argument 'upwp_pert' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1032:46:

 1032 |                                         um, vm, up3, vp3, rtm, thlm, rtp3, thlp3, wp3, upwp, vpwp, &
      |                                              1
Warning: Unused dummy argument 'vm' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1038:64:

 1038 |                                         wp2vp2, um_pert, vm_pert, upwp_pert, vpwp_pert, edsclrm, &
      |                                                                1
Warning: Unused dummy argument 'vm_pert' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1032:56:

 1032 |                                         um, vm, up3, vp3, rtm, thlm, rtp3, thlp3, wp3, upwp, vpwp, &
      |                                                        1
Warning: Unused dummy argument 'vp3' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1037:71:

 1037 |                                         ice_supersat_frac, uprcp, vprcp, rc_coef_zm, wp4, wp2up2, &
      |                                                                       1
Warning: Unused dummy argument 'vprcp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1038:86:

 1038 |                                         wp2vp2, um_pert, vm_pert, upwp_pert, vpwp_pert, edsclrm, &
      |                                                                                      1
Warning: Unused dummy argument 'vpwp_pert' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1039:97:

 1039 |                                         rcm_in_layer, cloud_cover, w_up_in_cloud, w_down_in_cloud, &
      |                                                                                                 1
Warning: Unused dummy argument 'w_down_in_cloud' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1039:80:

 1039 |                                         rcm_in_layer, cloud_cover, w_up_in_cloud, w_down_in_cloud, &
      |                                                                                1
Warning: Unused dummy argument 'w_up_in_cloud' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1036:67:

 1036 |                                         thlpthvp, sclrpthvp, wp2rtp, wp2thlp, wpup2, wpvp2, &
      |                                                                   1
Warning: Unused dummy argument 'wp2rtp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1036:76:

 1036 |                                         thlpthvp, sclrpthvp, wp2rtp, wp2thlp, wpup2, wpvp2, &
      |                                                                            1
Warning: Unused dummy argument 'wp2thlp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1035:80:

 1035 |                                         p_in_Pa, exner, rcm, cloud_frac, wp2thvp, wpthvp, rtpthvp, &
      |                                                                                1
Warning: Unused dummy argument 'wp2thvp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1037:96:

 1037 |                                         ice_supersat_frac, uprcp, vprcp, rc_coef_zm, wp4, wp2up2, &
      |                                                                                                1
Warning: Unused dummy argument 'wp2up2' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1038:46:

 1038 |                                         wp2vp2, um_pert, vm_pert, upwp_pert, vpwp_pert, edsclrm, &
      |                                              1
Warning: Unused dummy argument 'wp2vp2' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1037:88:

 1037 |                                         ice_supersat_frac, uprcp, vprcp, rc_coef_zm, wp4, wp2up2, &
      |                                                                                        1
Warning: Unused dummy argument 'wp4' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1040:89:

 1040 |                                         cloudy_updraft_frac, cloudy_downdraft_frac, wprcp, &
      |                                                                                         1
Warning: Unused dummy argument 'wprcp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1034:62:

 1034 |                                         sclrm, sclrp3, wpsclrp, sclrp2, sclrprtp, sclrpthlp, &
      |                                                              1
Warning: Unused dummy argument 'wpsclrp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1035:88:

 1035 |                                         p_in_Pa, exner, rcm, cloud_frac, wp2thvp, wpthvp, rtpthvp, &
      |                                                                                        1
Warning: Unused dummy argument 'wpthvp' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1036:83:

 1036 |                                         thlpthvp, sclrpthvp, wp2rtp, wp2thlp, wpup2, wpvp2, &
      |                                                                                   1
Warning: Unused dummy argument 'wpup2' at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/CLUBB_core/output_netcdf.F90:1036:90:

 1036 |                                         thlpthvp, sclrpthvp, wp2rtp, wp2thlp, wpup2, wpvp2, &
      |                                                                                          1
Warning: Unused dummy argument 'wpvp2' at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_coamps.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_KK_microphys.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_bugsrad.a
/home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62:

  633 |       do category=1, num_importance_categories
      |                                              2                
......
  638 |                rand_vect(sample) <  category_cumulative_probs(category+1) ) then
      |                                                              1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_morrison.a
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libsilhs.a
../src/ice_dfsn_module.F90:275:25:

  210 |     do k = gr%nzt, 1, -1
      |                        2 
......
  275 |           mass_ice_cryst(k-1) = mass_ice_cryst(k)  &
      |                         1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
../src/ice_dfsn_module.F90:290:25:

  210 |     do k = gr%nzt, 1, -1
      |                        2 
......
  290 |           mass_ice_cryst(k-1) = mass_ice_cryst(k)
      |                         1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
../src/Benchmark_cases/cloud_sed_module.F90:173:45:

  173 |        if ( zt2zm( gr, rcm, k )  > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
      |                                             1
Warning: Impure function 'redirect_interpolated_azm_k' at (1) might not be evaluated [-Wfunction-elimination]
../src/morrison_microphys_module.F90:20:33:

   20 |                saturation_formula, &
      |                                 1
Warning: Unused dummy argument 'saturation_formula' at (1) [-Wunused-dummy-argument]
../src/KK_microphys_module.F90:43:35:

   43 |   subroutine KK_local_microphys( gr, dt, nzt,                           & ! In
      |                                   1
Warning: Unused dummy argument 'gr' at (1) [-Wunused-dummy-argument]
../src/clubb_driver.F90:6254:66:

 6254 |                                          stats_lh_zt, stats_lh_sfc, stats_rad_zt, &
      |                                                                  1
Warning: Unused dummy argument 'stats_lh_sfc' at (1) [-Wunused-dummy-argument]
../src/clubb_driver.F90:6254:52:

 6254 |                                          stats_lh_zt, stats_lh_sfc, stats_rad_zt, &
      |                                                    1
Warning: Unused dummy argument 'stats_lh_zt' at (1) [-Wunused-dummy-argument]
../src/clubb_driver.F90:6255:64:

 6255 |                                          stats_rad_zm, stats_sfc )
      |                                                                1
Warning: Unused dummy argument 'stats_sfc' at (1) [-Wunused-dummy-argument]
../src/clubb_driver.F90:4381:58:

 4381 |   subroutine cleanup_clubb( l_input_fields, stats_metadata, gr )
      |                                                          1
Warning: Unused dummy argument 'stats_metadata' at (1) [-Wunused-dummy-argument]
../src/clubb_driver.F90:60:8:

   60 |     use parameter_indices, only: &
      |        1
Warning: Unused parameter 'ic_k' which has been explicitly imported at (1) [-Wunused-parameter]
../src/clubb_driver.F90:404:31:

  404 |       itime, i, j, sclr, edsclr, & ! Local Loop Variables
      |                               1
Warning: Unused variable 'edsclr' declared at (1) [-Wunused-variable]
../src/clubb_driver.F90:945:8:

  945 |       rc
      |        1
Warning: Unused variable 'rc' declared at (1) [-Wunused-variable]
ar: creating /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test/compile/../lib/libclubb_other.a
../src/clubb_standalone.F90:53:26:

   53 |   character(len=10) :: arg
      |                          1
Warning: Unused variable 'arg' declared at (1) [-Wunused-variable]
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Expected read_random_seed for end function. 
CLUBBStandardsCheck.pl WARNING: Endings of either program, module, subroutine, or function blocks to not match the beginning 
../src/error.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
381 :             um(i,k)    = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), & 
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
383 :             vm(i,k)    = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
385 :             ugm(i,k)   = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
387 :             vgm(i,k)   = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
389 :             thlm(i,k)  = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
391 :             rtm(i,k)   = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
393 :             press(i,k) = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
396 :             wm(i,k)    = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
413 :                                                            edsclr_snd(km1,edsclr), edsclr_snd(k00,edsclr), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
414 :                                                            edsclr_snd(kp1,edsclr), edsclr_snd(kp2,edsclr) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
438 :               um(i,k)   = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), u(k_above), u(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
439 :               vm(i,k)   = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), v(k_above), v(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
440 :               ugm(i,k)  = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), ug(k_above), ug(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
441 :               vgm(i,k)  = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), vg(k_above), vg(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
442 :               thlm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), theta(k_above), theta(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
443 :               rtm(i,k)  = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), rt(k_above), rt(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
444 :               press(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), p_in_Pa(k_above), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
446 :               wm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), subs(k_above), subs(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
450 :                   sclrm(i,k,sclr) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1),  & 
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
456 :                   edsclrm(i,k,edsclr) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1),  & 
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
485 :                 wm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), subs(k_above), subs(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
511 :                 wm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), subs(k_above), subs(k_above-1) )
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/sounding.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1707 :     allocate( um_ref(ngrdcol, gr%nzt) )         ! Reference u wind for nudging; Michael Falk, 17 Oct 2007
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1708 :     allocate( vm_ref(ngrdcol, gr%nzt) )         ! Reference v wind for nudging; Michael Falk, 17 Oct 2007
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2181 :       ! Initialize statistics output, note that this will allocate/initialize stats variables for all
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2202 :       ! Initialize statistics output, note that this will allocate/initialize stats variables for all
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2370 :             wp2_zt = max( zm2zt( gr%nzm, gr%nzt, ngrdcol, gr, wp2 ), w_tol_sqd ) ! Positive definite quantity
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2386 :                                     um(i,:), vm(i,:), rtm(i,:), wprtp(i,:), thlm(i,:), wpthlp(i,:), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2420 :                                 rtm(i,:), wm_zm(i,:), wm_zt(i,:), ug(i,:), vg(i,:), um_ref(i,:), vm_ref(i,:), & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2423 :                                 rtp2_forcing(i,:), thlp2_forcing(i,:), rtpthlp_forcing(i,:), & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2424 :                                 wpsclrp(i,:,:), sclrm_forcing(i,:,:), edsclrm_forcing(i,:,:), & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2543 :       wp2_zt = max( zm2zt( gr%nzm, gr%nzt, ngrdcol, gr, wp2 ), w_tol_sqd ) ! Positive definite quantity
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2549 :         call setup_pdf_parameters( gr, gr%nzm, gr%nzt, ngrdcol, pdf_dim, hydromet_dim, dt_main,  & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2550 :                                         Nc_in_cloud, cloud_frac, Kh_zm,                             & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2551 :                                         ice_supersat_frac, hydromet, wphydrometp,                   & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2552 :                                         corr_array_n_cloud, corr_array_n_below,                     & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2553 :                                         hm_metadata,                                                & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2554 :                                         pdf_params,                                                 & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2555 :                                         clubb_params,                                          & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2556 :                                         clubb_config_flags%iiPDF_type,                              & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2557 :                                         l_use_precip_frac,                                          & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2558 :                                         clubb_config_flags%l_predict_upwp_vpwp,                     & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2559 :                                         clubb_config_flags%l_diagnose_correlations,                 & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2560 :                                         clubb_config_flags%l_calc_w_corr,                           & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2561 :                                         clubb_config_flags%l_const_Nc_in_cloud,                     & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2562 :                                         clubb_config_flags%l_fix_w_chi_eta_correlations,            & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2563 :                                         stats_metadata,                                             & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2564 :                                         stats_zt, stats_zm, stats_sfc,                              & ! In/Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2570 :                                         precip_fracs,                                               & ! In/Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2571 :                                         hydromet_pdf_params )                                  ! Optional(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2591 :                                    stats_zt(i), stats_zm(i),                               & ! In/Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2592 :                                    rtphmp_zt(i,:,:), thlphmp_zt(i,:,:), wp2hmp(i,:,:) )                     ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2711 :                                 thlm(i,:), p_in_Pa(i,:), exner(i,:), rho(i,:), rho_zm(i,:), rtm(i,:), &! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2712 :                                 rcm(i,:), cloud_frac(i,:), wm_zt(i,:), wm_zm(i,:), wp2_zt(i,:), &      ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2713 :                                 hydromet(i,:,:), Nc_in_cloud(i,:), &                                ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2729 :                                 stats_zt(i), stats_zm(i), &                                   ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2730 :                                 stats_sfc(i), stats_lh_zt(i), &                               ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2732 :                                 hydromet_mc(i,:,:), Ncm_mc(i,:), rcm_mc(i,:), rvm_mc(i,:), &                  ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2733 :                                 thlm_mc(i,:), hydromet_vel_zt(i,:,:), &                             ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2736 :                                 wprtp_mc(i,:), wpthlp_mc(i,:), rtp2_mc(i,:), &                         ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2737 :                                 thlp2_mc(i,:), rtpthlp_mc(i,:) )                                  ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2775 :                                 hydromet(i,:,:), hydromet_vel_zt(i,:,:), hydrometp2(i,:,:),      & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2776 :                                 K_hm(i,:,:), Ncm(i,:), Nc_in_cloud(i,:), rvm_mc(i,:), thlm_mc(i,:),    & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2799 :           call stat_update_var( stats_metadata%iwprtp_mc, wprtp_mc, stats_zm(i) )     ! m*(kg/kg)/s^2
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2823 :                   time_current, time_initial, rho(i,:), rho_zm(i,:),                               & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2824 :                   p_in_Pa(i,:), exner(i,:), cloud_frac(i,:), ice_supersat_frac(i,:), X_nl_all_levs(i,:,:,:), & !In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2826 :                   lh_sample_point_weights(i,:,:), hydromet(i,:,:),                              & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2827 :                   stats_metadata, stats_sfc(i),                                                & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2828 :                   radht(i,:), Frad(i,:), Frad_SW_up(i,:), Frad_LW_up(i,:), Frad_SW_down(i,:), Frad_LW_down(i,:) )        ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2901 :       if ( ( stats_metadata%l_stats_last .or. stats_metadata%l_stats .or. l_output_multi_col ) .and. l_stdout ) then
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3345 :                                       p_sfc(i), rtm_sfc(i), rtm(i,:),                     & ! Intent(in)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3347 :                                       thlm(i,:), p_in_Pa(i,:), p_in_Pa_zm(i,:),               & ! Intent(inout)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3348 :                                       exner(i,:), rho(i,:), rho_zm(i,:),                      & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3349 :                                       rcm(i,:), thvm(i,:), rho_ds_zm(i,:),                    & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3350 :                                       rho_ds_zt(i,:), invrs_rho_ds_zm(i,:),              & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3351 :                                       invrs_rho_ds_zt(i,:), thv_ds_zm(i,:),              & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3352 :                                       thv_ds_zt(i,:), sclrm(i,:,:), edsclrm(i,:,:) )                ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
6555 :              hm_metadata, stats_metadata, stats_sfc, &                                          ! Intent(in)
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/clubb_driver.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Missing 'implicit none' statements. 'Implicit None' check FAILED! 
CLUBBStandardsCheck.pl Add a line containing 'implicit none' to each program, module, subroutine, and function.
../src/CLUBB_core/mt95.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
718 :     ! MONOFLUX TEST COMMENT DO NOT REMOVE if( any(wpxp_net_adjust /= 0.0) ) write(fstderr,*) "MONOFLUX: wpxp adjusted "
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/mono_flux_limiter.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1241 :       status = nf90_def_var( ncid_zm, "columns",   NF90_DOUBLE,  (/column_id_zm/),    column_var_id_zm )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1242 :       status = nf90_def_var( ncid_zm, "altitude",  NF90_DOUBLE,  (/vertical_id_zm/),  vertical_var_id_zm )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1243 :       status = nf90_def_var( ncid_zm, "time",      NF90_DOUBLE,  (/time_id_zm/),      time_var_id_zm )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1300 :       status = nf90_def_var( ncid_zt, "columns",   NF90_DOUBLE,  (/column_id_zt/),    column_var_id_zt )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1301 :       status = nf90_def_var( ncid_zt, "altitude",  NF90_DOUBLE,  (/vertical_id_zt/),  vertical_var_id_zt )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1302 :       status = nf90_def_var( ncid_zt, "time",      NF90_DOUBLE,  (/time_id_zt/),      time_var_id_zt )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1381 :     status = nf90_put_var( ncid_zm, ind_zm(1),                wpthlp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1382 :     status = nf90_put_var( ncid_zm, ind_zm(2),                 wprtp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1383 :     status = nf90_put_var( ncid_zm, ind_zm(3),                   wp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1384 :     status = nf90_put_var( ncid_zm, ind_zm(4),                 thlp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1385 :     status = nf90_put_var( ncid_zm, ind_zm(5),                  rtp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1386 :     status = nf90_put_var( ncid_zm, ind_zm(6),               rtpthlp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1387 :     status = nf90_put_var( ncid_zm, ind_zm(7),                  upwp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1388 :     status = nf90_put_var( ncid_zm, ind_zm(8),                  vpwp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1389 :     status = nf90_put_var( ncid_zm, ind_zm(9),                   up2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1390 :     status = nf90_put_var( ncid_zm, ind_zm(10),                  vp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1393 :     status = nf90_put_var( ncid_zt, ind_zt(1),                   wp3, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1394 :     status = nf90_put_var( ncid_zt, ind_zt(2),                   rcm, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1395 :     status = nf90_put_var( ncid_zt, ind_zt(3),            cloud_frac, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1396 :     status = nf90_put_var( ncid_zt, ind_zt(4),                   rtm, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1397 :     status = nf90_put_var( ncid_zt, ind_zt(5),                  thlm, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/output_netcdf.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1916 :                                   rhs_bp )                                              ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1921 :       call wpxp_terms_bp_pr3_rhs( nzm, ngrdcol, C7_Skw_fnc_plus_one, thv_ds_zm, xpthvp, & ! intent(in)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1922 :                                   rhs_pr3 )                                               ! intent(out)
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/advance_xm_wpxp_module.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1548 :       !$acc data copyin( C_uu_shr_zeros, C_uu_shr_plus_one, C11_Skw_fnc_zeros, C11_Skw_fnc_plus_one ) &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1571 :                                  lhs_wp3_pr2_term )                                     ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2677 :       !$acc data copyin( C_uu_buoy_zeros, C_uu_buoy_plus_one, C11_Skw_fnc_zeros, C11_Skw_fnc_plus_one ) &
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/advance_wp2_wp3_module.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
709 :       call stats_zero( stats_zt(i)%ii, stats_zt(i)%jj, stats_zt(i)%kk, stats_zt(i)%num_output_fields, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
710 :         stats_zt(i)%accum_field_values, stats_zt(i)%accum_num_samples, stats_zt(i)%l_in_update ) ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
738 :       call open_netcdf_for_writing( nlat, nlon, fdir, fname, 1, stats_zt(1)%kk, stats_zt(1)%z, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
817 :         allocate( stats_lh_zt(i)%l_in_update( stats_lh_zt(i)%ii, stats_lh_zt(i)%jj, stats_lh_zt(i)%kk, &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1148 :       call stats_zero( stats_zm(i)%ii, stats_zm(i)%jj, stats_zm(i)%kk, stats_zm(i)%num_output_fields, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1149 :         stats_zm(i)%accum_field_values, stats_zm(i)%accum_num_samples, stats_zm(i)%l_in_update ) ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1174 :       call open_netcdf_for_writing( nlat, nlon, fdir, fname, 1, stats_zm(1)%kk, stats_zm(1)%z, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1238 :                         stats_rad_zt(i)%accum_num_samples, stats_rad_zt(i)%l_in_update )! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1325 :                         stats_rad_zm(i)%accum_num_samples, stats_rad_zm(i)%l_in_update ) ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1415 :       call stats_zero( stats_sfc(i)%ii, stats_sfc(i)%jj, stats_sfc(i)%kk, stats_sfc(i)%num_output_fields, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1416 :         stats_sfc(i)%accum_field_values, stats_sfc(i)%accum_num_samples, stats_sfc(i)%l_in_update ) ! out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1440 :       call open_netcdf_for_writing( nlat, nlon, fdir, fname, 1, stats_sfc(1)%kk, stats_sfc(1)%z, & ! In
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/stats_clubb_utilities.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
 multicol_def namelist not found in clubb.in -- defaulting to ngrdcol = 1
 Warning: ../input/case_setups/bomex_corr_array_cloud.in was not found! The default correlation arrays will be used.
 Program exited normally
 multicol_def namelist not found in clubb.in -- defaulting to ngrdcol = 1
 Warning: ../input/case_setups/dycoms2_rf01_corr_array_cloud.in was not found! The default correlation arrays will be used.
 Program exited normally
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Expected read_random_seed for end function. 
CLUBBStandardsCheck.pl WARNING: Endings of either program, module, subroutine, or function blocks to not match the beginning 
../src/error.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
381 :             um(i,k)    = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), & 
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
383 :             vm(i,k)    = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
385 :             ugm(i,k)   = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
387 :             vgm(i,k)   = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
389 :             thlm(i,k)  = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
391 :             rtm(i,k)   = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
393 :             press(i,k) = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
396 :             wm(i,k)    = mono_cubic_interp( gr%zt(i,k), km1, k00, kp1, kp2, z(km1), z(k00), z(kp1), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
413 :                                                            edsclr_snd(km1,edsclr), edsclr_snd(k00,edsclr), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
414 :                                                            edsclr_snd(kp1,edsclr), edsclr_snd(kp2,edsclr) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
438 :               um(i,k)   = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), u(k_above), u(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
439 :               vm(i,k)   = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), v(k_above), v(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
440 :               ugm(i,k)  = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), ug(k_above), ug(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
441 :               vgm(i,k)  = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), vg(k_above), vg(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
442 :               thlm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), theta(k_above), theta(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
443 :               rtm(i,k)  = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), rt(k_above), rt(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
444 :               press(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), p_in_Pa(k_above), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
446 :               wm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), subs(k_above), subs(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
450 :                   sclrm(i,k,sclr) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1),  & 
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
456 :                   edsclrm(i,k,edsclr) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1),  & 
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
485 :                 wm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), subs(k_above), subs(k_above-1) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
511 :                 wm(i,k) = lin_interpolate_two_points( gr%zt(i,k), z(k_above), z(k_above-1), subs(k_above), subs(k_above-1) )
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/sounding.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1707 :     allocate( um_ref(ngrdcol, gr%nzt) )         ! Reference u wind for nudging; Michael Falk, 17 Oct 2007
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1708 :     allocate( vm_ref(ngrdcol, gr%nzt) )         ! Reference v wind for nudging; Michael Falk, 17 Oct 2007
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2181 :       ! Initialize statistics output, note that this will allocate/initialize stats variables for all
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2202 :       ! Initialize statistics output, note that this will allocate/initialize stats variables for all
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2370 :             wp2_zt = max( zm2zt( gr%nzm, gr%nzt, ngrdcol, gr, wp2 ), w_tol_sqd ) ! Positive definite quantity
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2386 :                                     um(i,:), vm(i,:), rtm(i,:), wprtp(i,:), thlm(i,:), wpthlp(i,:), &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2420 :                                 rtm(i,:), wm_zm(i,:), wm_zt(i,:), ug(i,:), vg(i,:), um_ref(i,:), vm_ref(i,:), & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2423 :                                 rtp2_forcing(i,:), thlp2_forcing(i,:), rtpthlp_forcing(i,:), & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2424 :                                 wpsclrp(i,:,:), sclrm_forcing(i,:,:), edsclrm_forcing(i,:,:), & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2543 :       wp2_zt = max( zm2zt( gr%nzm, gr%nzt, ngrdcol, gr, wp2 ), w_tol_sqd ) ! Positive definite quantity
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2549 :         call setup_pdf_parameters( gr, gr%nzm, gr%nzt, ngrdcol, pdf_dim, hydromet_dim, dt_main,  & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2550 :                                         Nc_in_cloud, cloud_frac, Kh_zm,                             & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2551 :                                         ice_supersat_frac, hydromet, wphydrometp,                   & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2552 :                                         corr_array_n_cloud, corr_array_n_below,                     & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2553 :                                         hm_metadata,                                                & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2554 :                                         pdf_params,                                                 & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2555 :                                         clubb_params,                                          & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2556 :                                         clubb_config_flags%iiPDF_type,                              & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2557 :                                         l_use_precip_frac,                                          & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2558 :                                         clubb_config_flags%l_predict_upwp_vpwp,                     & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2559 :                                         clubb_config_flags%l_diagnose_correlations,                 & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2560 :                                         clubb_config_flags%l_calc_w_corr,                           & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2561 :                                         clubb_config_flags%l_const_Nc_in_cloud,                     & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2562 :                                         clubb_config_flags%l_fix_w_chi_eta_correlations,            & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2563 :                                         stats_metadata,                                             & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2564 :                                         stats_zt, stats_zm, stats_sfc,                              & ! In/Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2570 :                                         precip_fracs,                                               & ! In/Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2571 :                                         hydromet_pdf_params )                                  ! Optional(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2591 :                                    stats_zt(i), stats_zm(i),                               & ! In/Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2592 :                                    rtphmp_zt(i,:,:), thlphmp_zt(i,:,:), wp2hmp(i,:,:) )                     ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2711 :                                 thlm(i,:), p_in_Pa(i,:), exner(i,:), rho(i,:), rho_zm(i,:), rtm(i,:), &! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2712 :                                 rcm(i,:), cloud_frac(i,:), wm_zt(i,:), wm_zm(i,:), wp2_zt(i,:), &      ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2713 :                                 hydromet(i,:,:), Nc_in_cloud(i,:), &                                ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2729 :                                 stats_zt(i), stats_zm(i), &                                   ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2730 :                                 stats_sfc(i), stats_lh_zt(i), &                               ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2732 :                                 hydromet_mc(i,:,:), Ncm_mc(i,:), rcm_mc(i,:), rvm_mc(i,:), &                  ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2733 :                                 thlm_mc(i,:), hydromet_vel_zt(i,:,:), &                             ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2736 :                                 wprtp_mc(i,:), wpthlp_mc(i,:), rtp2_mc(i,:), &                         ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2737 :                                 thlp2_mc(i,:), rtpthlp_mc(i,:) )                                  ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2775 :                                 hydromet(i,:,:), hydromet_vel_zt(i,:,:), hydrometp2(i,:,:),      & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2776 :                                 K_hm(i,:,:), Ncm(i,:), Nc_in_cloud(i,:), rvm_mc(i,:), thlm_mc(i,:),    & ! Inout
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2799 :           call stat_update_var( stats_metadata%iwprtp_mc, wprtp_mc, stats_zm(i) )     ! m*(kg/kg)/s^2
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2823 :                   time_current, time_initial, rho(i,:), rho_zm(i,:),                               & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2824 :                   p_in_Pa(i,:), exner(i,:), cloud_frac(i,:), ice_supersat_frac(i,:), X_nl_all_levs(i,:,:,:), & !In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2826 :                   lh_sample_point_weights(i,:,:), hydromet(i,:,:),                              & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2827 :                   stats_metadata, stats_sfc(i),                                                & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2828 :                   radht(i,:), Frad(i,:), Frad_SW_up(i,:), Frad_LW_up(i,:), Frad_SW_down(i,:), Frad_LW_down(i,:) )        ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2901 :       if ( ( stats_metadata%l_stats_last .or. stats_metadata%l_stats .or. l_output_multi_col ) .and. l_stdout ) then
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3345 :                                       p_sfc(i), rtm_sfc(i), rtm(i,:),                     & ! Intent(in)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3347 :                                       thlm(i,:), p_in_Pa(i,:), p_in_Pa_zm(i,:),               & ! Intent(inout)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3348 :                                       exner(i,:), rho(i,:), rho_zm(i,:),                      & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3349 :                                       rcm(i,:), thvm(i,:), rho_ds_zm(i,:),                    & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3350 :                                       rho_ds_zt(i,:), invrs_rho_ds_zm(i,:),              & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3351 :                                       invrs_rho_ds_zt(i,:), thv_ds_zm(i,:),              & ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
3352 :                                       thv_ds_zt(i,:), sclrm(i,:,:), edsclrm(i,:,:) )                ! Intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
6555 :              hm_metadata, stats_metadata, stats_sfc, &                                          ! Intent(in)
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/clubb_driver.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1548 :       !$acc data copyin( C_uu_shr_zeros, C_uu_shr_plus_one, C11_Skw_fnc_zeros, C11_Skw_fnc_plus_one ) &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1571 :                                  lhs_wp3_pr2_term )                                     ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
2677 :       !$acc data copyin( C_uu_buoy_zeros, C_uu_buoy_plus_one, C11_Skw_fnc_zeros, C11_Skw_fnc_plus_one ) &
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/advance_wp2_wp3_module.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Missing 'implicit none' statements. 'Implicit None' check FAILED! 
CLUBBStandardsCheck.pl Add a line containing 'implicit none' to each program, module, subroutine, and function.
../src/CLUBB_core/mt95.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
718 :     ! MONOFLUX TEST COMMENT DO NOT REMOVE if( any(wpxp_net_adjust /= 0.0) ) write(fstderr,*) "MONOFLUX: wpxp adjusted "
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/mono_flux_limiter.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1241 :       status = nf90_def_var( ncid_zm, "columns",   NF90_DOUBLE,  (/column_id_zm/),    column_var_id_zm )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1242 :       status = nf90_def_var( ncid_zm, "altitude",  NF90_DOUBLE,  (/vertical_id_zm/),  vertical_var_id_zm )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1243 :       status = nf90_def_var( ncid_zm, "time",      NF90_DOUBLE,  (/time_id_zm/),      time_var_id_zm )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1300 :       status = nf90_def_var( ncid_zt, "columns",   NF90_DOUBLE,  (/column_id_zt/),    column_var_id_zt )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1301 :       status = nf90_def_var( ncid_zt, "altitude",  NF90_DOUBLE,  (/vertical_id_zt/),  vertical_var_id_zt )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1302 :       status = nf90_def_var( ncid_zt, "time",      NF90_DOUBLE,  (/time_id_zt/),      time_var_id_zt )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1381 :     status = nf90_put_var( ncid_zm, ind_zm(1),                wpthlp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1382 :     status = nf90_put_var( ncid_zm, ind_zm(2),                 wprtp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1383 :     status = nf90_put_var( ncid_zm, ind_zm(3),                   wp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1384 :     status = nf90_put_var( ncid_zm, ind_zm(4),                 thlp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1385 :     status = nf90_put_var( ncid_zm, ind_zm(5),                  rtp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1386 :     status = nf90_put_var( ncid_zm, ind_zm(6),               rtpthlp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1387 :     status = nf90_put_var( ncid_zm, ind_zm(7),                  upwp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1388 :     status = nf90_put_var( ncid_zm, ind_zm(8),                  vpwp, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1389 :     status = nf90_put_var( ncid_zm, ind_zm(9),                   up2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1390 :     status = nf90_put_var( ncid_zm, ind_zm(10),                  vp2, (/1,1,n_calls/), (/ngrdcol,nzm,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1393 :     status = nf90_put_var( ncid_zt, ind_zt(1),                   wp3, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1394 :     status = nf90_put_var( ncid_zt, ind_zt(2),                   rcm, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1395 :     status = nf90_put_var( ncid_zt, ind_zt(3),            cloud_frac, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1396 :     status = nf90_put_var( ncid_zt, ind_zt(4),                   rtm, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1397 :     status = nf90_put_var( ncid_zt, ind_zt(5),                  thlm, (/1,1,n_calls/), (/ngrdcol,nzt,1/) )
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/output_netcdf.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1916 :                                   rhs_bp )                                              ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1921 :       call wpxp_terms_bp_pr3_rhs( nzm, ngrdcol, C7_Skw_fnc_plus_one, thv_ds_zm, xpthvp, & ! intent(in)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1922 :                                   rhs_pr3 )                                               ! intent(out)
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/advance_xm_wpxp_module.F90
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
709 :       call stats_zero( stats_zt(i)%ii, stats_zt(i)%jj, stats_zt(i)%kk, stats_zt(i)%num_output_fields, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
710 :         stats_zt(i)%accum_field_values, stats_zt(i)%accum_num_samples, stats_zt(i)%l_in_update ) ! Out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
738 :       call open_netcdf_for_writing( nlat, nlon, fdir, fname, 1, stats_zt(1)%kk, stats_zt(1)%z, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
817 :         allocate( stats_lh_zt(i)%l_in_update( stats_lh_zt(i)%ii, stats_lh_zt(i)%jj, stats_lh_zt(i)%kk, &
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1148 :       call stats_zero( stats_zm(i)%ii, stats_zm(i)%jj, stats_zm(i)%kk, stats_zm(i)%num_output_fields, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1149 :         stats_zm(i)%accum_field_values, stats_zm(i)%accum_num_samples, stats_zm(i)%l_in_update ) ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1174 :       call open_netcdf_for_writing( nlat, nlon, fdir, fname, 1, stats_zm(1)%kk, stats_zm(1)%z, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1238 :                         stats_rad_zt(i)%accum_num_samples, stats_rad_zt(i)%l_in_update )! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1325 :                         stats_rad_zm(i)%accum_num_samples, stats_rad_zm(i)%l_in_update ) ! intent(out)
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1415 :       call stats_zero( stats_sfc(i)%ii, stats_sfc(i)%jj, stats_sfc(i)%kk, stats_sfc(i)%num_output_fields, & ! In
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1416 :         stats_sfc(i)%accum_field_values, stats_sfc(i)%accum_num_samples, stats_sfc(i)%l_in_update ) ! out
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
1440 :       call open_netcdf_for_writing( nlat, nlon, fdir, fname, 1, stats_sfc(1)%kk, stats_sfc(1)%z, & ! In
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/stats_clubb_utilities.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
 multicol_def namelist not found in clubb.in -- defaulting to ngrdcol = 1
 Warning: ../input/case_setups/bomex_corr_array_cloud.in was not found! The default correlation arrays will be used.
 Program exited normally
 multicol_def namelist not found in clubb.in -- defaulting to ngrdcol = 1
 Warning: ../input/case_setups/dycoms2_rf01_corr_array_cloud.in was not found! The default correlation arrays will be used.
 Program exited normally
Directory 1 is ec720a8fe4132c9af37967fd3060080097b13182
Directory 2 is f2ae5b70703e3a86d145983b4fea098cbb8925a3
Using reporting threshold:  0.0 


The following cases will be compared: ['bomex', 'dycoms2_rf01']

###DIFFING bomex netCDF (*.nc) files###
>No differences detected by the linux diff in bomex_zm.nc<
>No differences detected by the linux diff in bomex_zt.nc<
>No differences detected by the linux diff in bomex_sfc.nc<
>File bomex_multi_col_zm.nc can not be compared since it does not exist both folders.<
>File bomex_multi_col_zt.nc can not be compared since it does not exist both folders.<
>>>The linux diff could not detect any differences in the file pairs for case bomex.<<<
**********************************************************************************************************
###DIFFING dycoms2_rf01 netCDF (*.nc) files###
>No differences detected by the linux diff in dycoms2_rf01_zm.nc<
>No differences detected by the linux diff in dycoms2_rf01_zt.nc<
>No differences detected by the linux diff in dycoms2_rf01_sfc.nc<
>File dycoms2_rf01_multi_col_zm.nc can not be compared since it does not exist both folders.<
>File dycoms2_rf01_multi_col_zt.nc can not be compared since it does not exist both folders.<
>>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.<<<
**********************************************************************************************************
SUMMARY:
Linux diff did not detect any differences in the compared files.

=============================== Configuring Test ===============================


Working directory set to: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test

Using /home/jenkins/workspace/clubb_BFB_r8029_flags_gfortran_test with origin https://github.com/larson-group/clubb.git

Output Save Mode: none

Using branch: master

Making list from 'UnresolvedCommits':

CheckRange = True: Getting commit range

Run Output Path: output

Run commands: ['compile/compile.bash', '\nrm -rf output', 'mkdir output', '\ncp input/tunable_parameters_compatible_r8029/configurable_model_flags.in input/tunable_parameters', '\ncp input/tunable_parameters_compatible_r8029/silhs_parameters.in input/tunable_parameters', '\ncp input/tunable_parameters_compatible_r8029/tunable_parameters.in input/tunable_parameters', '\nrun_scripts/run_scm.bash bomex', '\nrun_scripts/run_scm.bash dycoms2_rf01']

Diffing command: python3 run_scripts/run_bindiff_all.py

=============================== Running Test ===============================

Parsing message from commit: 75fd9262981e736aed8bc8995ec4f2c88bd03d12
Parsing message from commit: ec720a8fe4132c9af37967fd3060080097b13182

Checking Commit: 75fd9262981e736aed8bc8995ec4f2c88bd03d12
	Skipping: not final commit and not labelled BIT_CHANGING

Checking Commit: ec720a8fe4132c9af37967fd3060080097b13182
	Running: final commit to check, not labelled BIT_CHANGING
	Checking out ec720a8fe4132c9af37967fd3060080097b13182
	Running: 'compile/compile.bash'
	Running: 'rm -rf output'
	Running: 'mkdir output'
	Running: 'cp input/tunable_parameters_compatible_r8029/configurable_model_flags.in input/tunable_parameters'
	Running: 'cp input/tunable_parameters_compatible_r8029/silhs_parameters.in input/tunable_parameters'
	Running: 'cp input/tunable_parameters_compatible_r8029/tunable_parameters.in input/tunable_parameters'
	Running: 'run_scripts/run_scm.bash bomex'
	Running: 'run_scripts/run_scm.bash dycoms2_rf01'
	Checking out f2ae5b70703e3a86d145983b4fea098cbb8925a3
	Running: 'compile/compile.bash'
	Running: 'rm -rf output'
	Running: 'mkdir output'
	Running: 'cp input/tunable_parameters_compatible_r8029/configurable_model_flags.in input/tunable_parameters'
	Running: 'cp input/tunable_parameters_compatible_r8029/silhs_parameters.in input/tunable_parameters'
	Running: 'cp input/tunable_parameters_compatible_r8029/tunable_parameters.in input/tunable_parameters'
	Running: 'run_scripts/run_scm.bash bomex'
	Running: 'run_scripts/run_scm.bash dycoms2_rf01'
	Diffing: 'python3 run_scripts/run_bindiff_all.py ec720a8fe4132c9af37967fd3060080097b13182 f2ae5b70703e3a86d145983b4fea098cbb8925a3'

=============================== Test Results ===============================

Commit Range Checked = f2ae5b70703e3a86d145983b4fea098cbb8925a3...ec720a8fe4132c9af37967fd3060080097b13182

No new Unresolved commits found.

No fake BIT_CHANGING commits found.

No remaining Unresolved Commits.

=============================== Updating Config File ===============================


Saving into UnresolvedCommits: 

Saving into BaselineCommit: ec720a8fe4132c9af37967fd3060080097b13182

=============================== Cleanup ===============================

Removing all generated output
	REMOVING: f2ae5b70703e3a86d145983b4fea098cbb8925a3
	REMOVING: ec720a8fe4132c9af37967fd3060080097b13182

================== Unresolved Commit Status ==================

No remaining Unresolved Commits.

Exiting with code: 0
[Pipeline] }
[Pipeline] // stage
[Pipeline] }
[Pipeline] // withEnv
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS