+ python3 /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32:
2520 | subroutine init_parameters_999( &
| ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23:
139 | hydromet, & ! Unused
| 1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_KK_microphys.a
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62:
633 | do category=1, num_importance_categories
| 2
......
638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then
| 1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_bugsrad.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_coamps.a
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13:
327 | rho_ds_zt, & ! Unused
| 1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libsilhs.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_morrison.a
../src/Benchmark_cases/cloud_sed_module.F90:168:44:
168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
| 1
Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination]
../src/KK_microphys_module.F90:43:35:
43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
| 1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_other.a
../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8:
24 | use clubb_precision, only: &
| 1
Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter]
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
842 : write(iunit,*) "l_fix_w_chi_eta_correlations = ", clubb_config_flags%l_fix_w_chi_eta_correlations
CLUBBStandardsCheck.pl WARNING: Line has exceeded 100 characters.
859 : write(iunit,*) "l_use_tke_in_wp3_pr_turb_term = ", clubb_config_flags%l_use_tke_in_wp3_pr_turb_term
CLUBBStandardsCheck.pl WARNING: File has lines that exceed 100 characters.
../src/CLUBB_core/model_flags.F90
--------------------------------------------------------------------------------
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Warning: ../input/case_setups/bomex_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Warning: ../input/case_setups/dycoms2_rf01_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32:
2520 | subroutine init_parameters_999( &
| ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23:
139 | hydromet, & ! Unused
| 1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62:
633 | do category=1, num_importance_categories
| 2
......
638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then
| 1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13:
327 | rho_ds_zt, & ! Unused
| 1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
../src/Benchmark_cases/cloud_sed_module.F90:168:44:
168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
| 1
Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination]
../src/KK_microphys_module.F90:43:35:
43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
| 1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8:
24 | use clubb_precision, only: &
| 1
Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter]
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Warning: ../input/case_setups/bomex_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Warning: ../input/case_setups/dycoms2_rf01_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/2f3a8a9c995174067f2a6687aff1fa96de2452e3.
Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/6dff441959e8cdb1eb5c52576309eb27f4f619c1.
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing bomex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf01 netCDF (*.nc) files
There were no differences detected!
=============================== Configuring Test ===============================
Working directory set to: .
Trying to clone repo...
Cloned repo location: /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo
Output Save Mode: none
Using branch: master
Commits to test vs the baseline (6dff441959e8cdb1eb5c52576309eb27f4f619c1)
2f3a8a9c995174067f2a6687aff1fa96de2452e3
Making list from 'UnresolvedCommits':
Run Output Path: repo/output
Run commands: ['repo/compile/compile.bash', '\nrm -rf repo/output', 'mkdir repo/output', '\ncp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters', '\nrepo/run_scripts/run_scm.bash bomex', '\nrepo/run_scripts/run_scm.bash dycoms2_rf01']
Diffing command: repo/run_scripts/run_bindiff_all.bash
=============================== Running Test ===============================
Parsing message from commit: 2f3a8a9c995174067f2a6687aff1fa96de2452e3
Checking Commit: 2f3a8a9c995174067f2a6687aff1fa96de2452e3
Running: final commit to check, not labelled BIT_CHANGING
Checking out 2f3a8a9c995174067f2a6687aff1fa96de2452e3
Running: 'repo/compile/compile.bash'
Running: '
rm -rf repo/output'
Running: 'mkdir repo/output'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters'
Running: '
repo/run_scripts/run_scm.bash bomex'
Running: '
repo/run_scripts/run_scm.bash dycoms2_rf01'
Checking out 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Running: 'repo/compile/compile.bash'
Running: '
rm -rf repo/output'
Running: 'mkdir repo/output'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters'
Running: '
repo/run_scripts/run_scm.bash bomex'
Running: '
repo/run_scripts/run_scm.bash dycoms2_rf01'
Diffing: 'repo/run_scripts/run_bindiff_all.bash 2f3a8a9c995174067f2a6687aff1fa96de2452e3 6dff441959e8cdb1eb5c52576309eb27f4f619c1'
=============================== Test Results ===============================
Commit Range Checked = 6dff441959e8cdb1eb5c52576309eb27f4f619c1...2f3a8a9c995174067f2a6687aff1fa96de2452e3
No new Unresolved commits found.
No fake BIT_CHANGING commits found.
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Saving into BaselineCommit: 2f3a8a9c995174067f2a6687aff1fa96de2452e3
=============================== Cleanup ===============================
Removed repo.
Removing all generated output
REMOVING: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
REMOVING: 2f3a8a9c995174067f2a6687aff1fa96de2452e3
================== Unresolved Commit Status ==================
No remaining Unresolved Commits.
Exiting with code: 0
