+ python3 /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_gfdlact.a
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32:
2520 | subroutine init_parameters_999( &
| ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/input_reader.F90:498:28:
491 | do i=1, dim_grid
| 2
......
498 | if ( grid(i) < grid(i-1) ) then
| 1
Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23:
139 | hydromet, & ! Unused
| 1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_param.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_lapack.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libmicrophys_utils.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_parabolic.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_KK_microphys.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_coamps.a
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62:
633 | do category=1, num_importance_categories
| 2
......
638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then
| 1
Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_bugsrad.a
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13:
327 | rho_ds_zt, & ! Unused
| 1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libsilhs.a
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_morrison.a
../src/Benchmark_cases/cloud_sed_module.F90:168:44:
168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then
| 1
Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination]
../src/KK_microphys_module.F90:43:35:
43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
| 1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_other.a
../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8:
24 | use clubb_precision, only: &
| 1
Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter]
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Warning: ../input/case_setups/bomex_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Warning: ../input/case_setups/dycoms2_rf01_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/ee117e4e991e6afcc9327cf8890439e1f90f86af.
Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/ee117e4e991e6afcc9327cf8890439e1f90f86af.
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing bomex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf01 netCDF (*.nc) files
There were no differences detected!
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2520:32:
2520 | subroutine init_parameters_999( &
| ^
Warning: ‘init_parameters_999’ defined but not used [-Wunused-function]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23:
139 | hydromet, & ! Unused
| 1
Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument]
/home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:327:13:
327 | rho_ds_zt, & ! Unused
| 1
Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument]
../src/KK_microphys_module.F90:43:35:
43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In
| 1
Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument]
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
CLUBBStandardsCheck.pl has begun.
CLUBBStandardsCheck.pl has finished.
Warning: ../input/case_setups/bomex_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Warning: ../input/case_setups/dycoms2_rf01_corr_array_cloud.in was not found! The default correlation arrays will be used.
Invalid configuration: l_min_xp2_from_corr_wx = F and l_enable_relaxed_clipping = F
They must have opposite values
Fatal error in setup_clubb_core
Program exited normally
Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/6dff441959e8cdb1eb5c52576309eb27f4f619c1.
Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/ee117e4e991e6afcc9327cf8890439e1f90f86af.
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing bomex netCDF (*.nc) files
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Traceback (most recent call last):
File "diff_netcdf_outputs.py", line 5, in <module>
import netCDF4
ImportError: No module named netCDF4
Diffing dycoms2_rf01 netCDF (*.nc) files
There were no differences detected!
=============================== Configuring Test ===============================
Working directory set to: .
Trying to clone repo...
Cloned repo location: /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo
Output Save Mode: none
Using branch: master
Commits to test vs the baseline (ee117e4e991e6afcc9327cf8890439e1f90f86af)
6dff441959e8cdb1eb5c52576309eb27f4f619c1
Making list from 'UnresolvedCommits':
Run Output Path: repo/output
Run commands: ['repo/compile/compile.bash', '\nrm -rf repo/output', 'mkdir repo/output', '\ncp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters', '\nrepo/run_scripts/run_scm.bash bomex', '\nrepo/run_scripts/run_scm.bash dycoms2_rf01']
Diffing command: repo/run_scripts/run_bindiff_all.bash
=============================== Running Test ===============================
Parsing message from commit: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Found: BIT_CHANGING
Checking Commit: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Checking out ee117e4e991e6afcc9327cf8890439e1f90f86af
Running: 'repo/compile/compile.bash'
Running: '
rm -rf repo/output'
Running: 'mkdir repo/output'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters'
Running: '
repo/run_scripts/run_scm.bash bomex'
Running: '
repo/run_scripts/run_scm.bash dycoms2_rf01'
Output from ee117e4e991e6afcc9327cf8890439e1f90f86af already saved
Diffing: 'repo/run_scripts/run_bindiff_all.bash ee117e4e991e6afcc9327cf8890439e1f90f86af ee117e4e991e6afcc9327cf8890439e1f90f86af'
Checking out 6dff441959e8cdb1eb5c52576309eb27f4f619c1
Running: 'repo/compile/compile.bash'
Running: '
rm -rf repo/output'
Running: 'mkdir repo/output'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters'
Running: '
cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters'
Running: '
repo/run_scripts/run_scm.bash bomex'
Running: '
repo/run_scripts/run_scm.bash dycoms2_rf01'
Output from ee117e4e991e6afcc9327cf8890439e1f90f86af already saved
Diffing: 'repo/run_scripts/run_bindiff_all.bash 6dff441959e8cdb1eb5c52576309eb27f4f619c1 ee117e4e991e6afcc9327cf8890439e1f90f86af'
[33m WARNING: commit '6dff441959e8cdb1eb5c52576309eb27f4f619c1' was supposed to be BIT_CHANGING, but is not.[0m
=============================== Test Results ===============================
Commit Range Checked = ee117e4e991e6afcc9327cf8890439e1f90f86af...6dff441959e8cdb1eb5c52576309eb27f4f619c1
No new Unresolved commits found.
Fake BIT_CHANGING Commits:
6dff441959e8cdb1eb5c52576309eb27f4f619c1
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Saving into BaselineCommit: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
=============================== Cleanup ===============================
Removed repo.
Removing all generated output
REMOVING: ee117e4e991e6afcc9327cf8890439e1f90f86af
REMOVING: 6dff441959e8cdb1eb5c52576309eb27f4f619c1
================== Unresolved Commit Status ==================
No remaining Unresolved Commits.
Exiting with code: 0