Started by an SCM change Obtained jenkins_tests/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/Jenkinsfile from git https://github.com/larson-group/clubb.git Running in Durability level: MAX_SURVIVABILITY [Pipeline] Start of Pipeline [Pipeline] node Still waiting to schedule task Waiting for next available executor Running on Jenkins in /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test [Pipeline] { [Pipeline] stage [Pipeline] { (Declarative: Checkout SCM) [Pipeline] checkout The recommended git tool is: git Cloning the remote Git repository Cloning repository https://github.com/larson-group/clubb.git > git init /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test # timeout=10 Fetching upstream changes from https://github.com/larson-group/clubb.git > git --version # timeout=10 > git --version # 'git version 1.8.3.1' using GIT_ASKPASS to set credentials A token based key used by Jenkins to preform Github actions, created 6/21/2021 > git fetch --tags --progress https://github.com/larson-group/clubb.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/larson-group/clubb.git # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 Avoid second fetch > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 Checking out Revision 517dd59a53c72aab76b5f40e078f08c7a736f0a9 (refs/remotes/origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 517dd59a53c72aab76b5f40e078f08c7a736f0a9 # timeout=10 Commit message: "Now that uprcp and vprcp have been passed through advance_clubb_core, I can get rid of this idiot-proofing code that stops the run when l_predict_upwp_vpwp is enabled and the PDF is in the "post" position." > git rev-list --no-walk c665567bd02143fd2060282ad5cb5dea6cdf2679 # timeout=10 [Pipeline] } [Pipeline] // stage [Pipeline] withEnv [Pipeline] { [Pipeline] stage [Pipeline] { (Clone SysAdmin to tmp) [Pipeline] sh + rm -rf /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin + git clone https://github.com/larson-group/sys_admin.git /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin Cloning into '/home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin'... [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Run Python Test) [Pipeline] sh + python3 /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/sys_admin/python_nightly_test_suite/run_test.py -c /home/jenkins/clubb_bin_diff_regression_backwards_compatibility_gfortran_test_workspace/bit_diff_clubb_bc_r8092_config ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_gfdlact.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/parameters_tunable.F90:2518:32: 2518 | subroutine init_parameters_999( & | ^ Warning: ‘init_parameters_999’ defined but not used [-Wunused-function] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/input_reader.F90:498:28: 491 | do i=1, dim_grid | 2 ...... 498 | if ( grid(i) < grid(i-1) ) then | 1 Warning: Array reference at (1) out of bounds (0 < 1) in loop beginning at (2) [-Wdo-subscript] /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_param.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_lapack.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libmicrophys_utils.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_parabolic.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_KK_microphys.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_importance_sample_module.F90:638:62: 633 | do category=1, num_importance_categories | 2 ...... 638 | rand_vect(sample) < category_cumulative_probs(category+1) ) then | 1 Warning: Array reference at (1) out of bounds (9 > 8) in loop beginning at (2) [-Wdo-subscript] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_bugsrad.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_coamps.a ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_morrison.a /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/SILHS/silhs_api_module.F90:323:13: 323 | rho_ds_zt, & ! Unused | 1 Warning: Unused dummy argument ‘rho_ds_zt’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libsilhs.a ../src/Benchmark_cases/cloud_sed_module.F90:168:44: 168 | if ( zt2zm( gr, rcm, k) > zero .AND. zt2zm( gr, Ncm, k ) > zero ) then | 1 Warning: Impure function ‘redirect_interpolated_azmk’ at (1) might not be evaluated [-Wfunction-elimination] ../src/KK_microphys_module.F90:43:35: 43 | subroutine KK_local_microphys( gr, dt, nz, l_latin_hypercube, & ! In | 1 Warning: Unused dummy argument ‘gr’ at (1) [-Wunused-dummy-argument] ar: creating /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../lib/libclubb_other.a ../src/G_unit_test_types/w_up_in_cloud_tests.F90:24:8: 24 | use clubb_precision, only: & | 1 Warning: Unused parameter ‘core_rknd’ which has been explicitly imported at (1) [-Wunused-parameter] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/517dd59a53c72aab76b5f40e078f08c7a736f0a9. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/c665567bd02143fd2060282ad5cb5dea6cdf2679. No data was found! ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................../home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo/compile/../src/CLUBB_core/advance_clubb_core_module.F90:139:23: 139 | hydromet, & ! Unused | 1 Warning: Unused dummy argument ‘hydromet’ at (1) [-Wunused-dummy-argument] CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. CLUBBStandardsCheck.pl has begun. CLUBBStandardsCheck.pl has finished. Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/74c54289ac37740b48512eecab9352c37a19a324. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/c665567bd02143fd2060282ad5cb5dea6cdf2679. No data was found! Directory 1 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/517dd59a53c72aab76b5f40e078f08c7a736f0a9. Directory 2 is /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/74c54289ac37740b48512eecab9352c37a19a324. No data was found! =============================== Configuring Test =============================== Working directory set to: . Trying to clone repo... Cloned repo location: /home/jenkins/workspace/clubb_bin_diff_regression_backwards_compatibility_gfortran_test/repo Output Save Mode: none Using branch: master Commits to test vs the baseline (c665567bd02143fd2060282ad5cb5dea6cdf2679) 74c54289ac37740b48512eecab9352c37a19a324 517dd59a53c72aab76b5f40e078f08c7a736f0a9 Making list from 'UnresolvedCommits': - fa5559b6fd09f3da30b4d4d0255c532b3dd53607 - ea5b5707470c2d942cbb7081436ede1baedde704 - 32af4729f9ff1d374e03249b1b4d8d05fd8052d6 - f983171d892eb60a4d3193f71125f280169a336f - c665567bd02143fd2060282ad5cb5dea6cdf2679 Run Output Path: repo/output Run commands: ['repo/compile/compile.bash', '\nrm -rf repo/output', 'mkdir repo/output', '\ncp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters', '\ncp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters', '\nrepo/run_scripts/run_scm_all.bash --min-cases'] Diffing command: repo/run_scripts/run_bindiff_all.bash =============================== Running Test =============================== Parsing message from commit: 74c54289ac37740b48512eecab9352c37a19a324 Parsing message from commit: 517dd59a53c72aab76b5f40e078f08c7a736f0a9 Checking Commit: 74c54289ac37740b48512eecab9352c37a19a324 Skipping: not final commit and not labelled BIT_CHANGING Checking Commit: 517dd59a53c72aab76b5f40e078f08c7a736f0a9 Running: final commit to check, not labelled BIT_CHANGING Checking out 517dd59a53c72aab76b5f40e078f08c7a736f0a9 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Checking out c665567bd02143fd2060282ad5cb5dea6cdf2679 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Diffing: 'repo/run_scripts/run_bindiff_all.bash 517dd59a53c72aab76b5f40e078f08c7a736f0a9 c665567bd02143fd2060282ad5cb5dea6cdf2679' [31m ISSUE WITH COMMIT DETECTED: 517dd59a53c72aab76b5f40e078f08c7a736f0a9 differs from c665567bd02143fd2060282ad5cb5dea6cdf2679[0m Finding all BIT_CHANGING commits in range: c665567bd02143fd2060282ad5cb5dea6cdf2679...517dd59a53c72aab76b5f40e078f08c7a736f0a9 Checking out 74c54289ac37740b48512eecab9352c37a19a324 Running: 'repo/compile/compile.bash' Running: ' rm -rf repo/output' Running: 'mkdir repo/output' Running: ' cp repo/input/tunable_parameters_compatible_r8029/configurable_model_flags.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/silhs_parameters.in repo/input/tunable_parameters' Running: ' cp repo/input/tunable_parameters_compatible_r8029/tunable_parameters.in repo/input/tunable_parameters' Running: ' repo/run_scripts/run_scm_all.bash --min-cases' Output from c665567bd02143fd2060282ad5cb5dea6cdf2679 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 74c54289ac37740b48512eecab9352c37a19a324 c665567bd02143fd2060282ad5cb5dea6cdf2679' Output from 517dd59a53c72aab76b5f40e078f08c7a736f0a9 already saved Output from 74c54289ac37740b48512eecab9352c37a19a324 already saved Diffing: 'repo/run_scripts/run_bindiff_all.bash 517dd59a53c72aab76b5f40e078f08c7a736f0a9 74c54289ac37740b48512eecab9352c37a19a324' Found: 74c54289ac37740b48512eecab9352c37a19a324 517dd59a53c72aab76b5f40e078f08c7a736f0a9 =============================== Test Results =============================== Commit Range Checked = c665567bd02143fd2060282ad5cb5dea6cdf2679...517dd59a53c72aab76b5f40e078f08c7a736f0a9 New Unresolved Commits: 74c54289ac37740b48512eecab9352c37a19a324 517dd59a53c72aab76b5f40e078f08c7a736f0a9 No fake BIT_CHANGING commits found. Remaining Unresolved Commits (oldest commit is listed first): fa5559b6fd09f3da30b4d4d0255c532b3dd53607 ea5b5707470c2d942cbb7081436ede1baedde704 32af4729f9ff1d374e03249b1b4d8d05fd8052d6 f983171d892eb60a4d3193f71125f280169a336f c665567bd02143fd2060282ad5cb5dea6cdf2679 74c54289ac37740b48512eecab9352c37a19a324 517dd59a53c72aab76b5f40e078f08c7a736f0a9 =============================== Updating Config File =============================== Saving into UnresolvedCommits: fa5559b6fd09f3da30b4d4d0255c532b3dd53607 ea5b5707470c2d942cbb7081436ede1baedde704 32af4729f9ff1d374e03249b1b4d8d05fd8052d6 f983171d892eb60a4d3193f71125f280169a336f c665567bd02143fd2060282ad5cb5dea6cdf2679 74c54289ac37740b48512eecab9352c37a19a324 517dd59a53c72aab76b5f40e078f08c7a736f0a9 Saving into BaselineCommit: 517dd59a53c72aab76b5f40e078f08c7a736f0a9 =============================== Cleanup =============================== Removed repo. Removing all generated output REMOVING: c665567bd02143fd2060282ad5cb5dea6cdf2679 REMOVING: 74c54289ac37740b48512eecab9352c37a19a324 REMOVING: 517dd59a53c72aab76b5f40e078f08c7a736f0a9 ================== Unresolved Commit Status ================== Remaining Unresolved Commits (oldest commit is listed first): fa5559b6fd09f3da30b4d4d0255c532b3dd53607 ea5b5707470c2d942cbb7081436ede1baedde704 32af4729f9ff1d374e03249b1b4d8d05fd8052d6 f983171d892eb60a4d3193f71125f280169a336f c665567bd02143fd2060282ad5cb5dea6cdf2679 74c54289ac37740b48512eecab9352c37a19a324 517dd59a53c72aab76b5f40e078f08c7a736f0a9 Exiting with code: 1 [Pipeline] } [Pipeline] // stage [Pipeline] stage [Pipeline] { (Declarative: Post Actions) [Pipeline] script [Pipeline] { [Pipeline] cleanWs [WS-CLEANUP] Deleting project workspace... [WS-CLEANUP] Deferred wipeout is used... [WS-CLEANUP] done [Pipeline] } [Pipeline] // script [Pipeline] script [Pipeline] { [Pipeline] emailext Sending email to: messnermet@uwm.edu [Pipeline] } [Pipeline] // script [Pipeline] } [Pipeline] // stage [Pipeline] } [Pipeline] // withEnv [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline ERROR: script returned exit code 1 Finished: FAILURE