+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-cascadelake/gcc-12.2.0/lmod-8.7.37-bi3kyxcdrfgw3y7vv2k7c5rjxg75qzju/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load nvhpc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_multi_col_BFB_nvhpc_test/config
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/workspace/clubb_multi_col_BFB_nvhpc_test
Trying to clone repo...
Cloned repo location: /home/jenkins/workspace/clubb_multi_col_BFB_nvhpc_test/repo
Output Save Mode: none
Using branch: master
Making list from 'UnresolvedCommits':
Run Output Path: repo/output
Run commands: ['repo/compile/compile.bash -c repo/compile/config/linux_x86_64_nvhpc_gpu_openacc.bash', '\nrm -rf repo/output', '\nmkdir repo/output', '\nrepo/run_scripts/create_multi_col_params.py -n 4 -out_file repo/run_scripts/clubb_params_multi_col.in -param_file repo/input/tunable_parameters/tunable_parameters.in', '\nrepo/run_scripts/run_scm_all.bash --min-cases -p repo/run_scripts/clubb_params_multi_col.in']
Diffing command: repo/run_scripts/run_bindiff_all.py
=============================== Running Test ===============================
Parsing message from commit: 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
Checking Commit: 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
Running: final commit to check, not labelled BIT_CHANGING
Checking out 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
Running: 'repo/compile/compile.bash -c repo/compile/config/linux_x86_64_nvhpc_gpu_openacc.bash'
Running: '
rm -rf repo/output'
Running: '
mkdir repo/output'
Running: '
repo/run_scripts/create_multi_col_params.py -n 4 -out_file repo/run_scripts/clubb_params_multi_col.in -param_file repo/input/tunable_parameters/tunable_parameters.in'
Running: '
repo/run_scripts/run_scm_all.bash --min-cases -p repo/run_scripts/clubb_params_multi_col.in'
================== WARNING ==================
Commit: 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
There was a problem copying the output.
Did the run complete?
Is the output path correct? repo/output
The run will continue, and this commit will be
considered unresolved.
===========================================
Checking out 91fc9735c426ef0fce29ebab86c6d1c7e4638b90
Running: 'repo/compile/compile.bash -c repo/compile/config/linux_x86_64_nvhpc_gpu_openacc.bash'
Running: '
rm -rf repo/output'
Running: '
mkdir repo/output'
Running: '
repo/run_scripts/create_multi_col_params.py -n 4 -out_file repo/run_scripts/clubb_params_multi_col.in -param_file repo/input/tunable_parameters/tunable_parameters.in'
Running: '
repo/run_scripts/run_scm_all.bash --min-cases -p repo/run_scripts/clubb_params_multi_col.in'
================== WARNING ==================
Commit: 91fc9735c426ef0fce29ebab86c6d1c7e4638b90
There was a problem copying the output.
Did the run complete?
Is the output path correct? repo/output
The run will continue, and this commit will be
considered unresolved.
===========================================
ISSUE WITH COMMIT DETECTED: 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34 differs from 91fc9735c426ef0fce29ebab86c6d1c7e4638b90
Finding all BIT_CHANGING commits in range: 91fc9735c426ef0fce29ebab86c6d1c7e4638b90...4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
Commit 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34 already failed. Will not run again
Commit 91fc9735c426ef0fce29ebab86c6d1c7e4638b90 already failed. Will not run again
Found:
4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
=============================== Test Results ===============================
Commit Range Checked = 91fc9735c426ef0fce29ebab86c6d1c7e4638b90...4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
New Unresolved Commits:
4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
No fake BIT_CHANGING commits found.
Remaining Unresolved Commits (oldest commit is listed first):
4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
=============================== Updating Config File ===============================
Saving into UnresolvedCommits: 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
Ignoring 4cc54e585f1e7e0a4308d1099292cddf3bcf1b34 since it failed to produce output.
=============================== Cleanup ===============================
Removed repo.
Removing all generated output
================== Unresolved Commit Status ==================
Remaining Unresolved Commits (oldest commit is listed first):
4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
================== FAILED Commits ==================
These are the commits which entirely failed to produce output:
4cc54e585f1e7e0a4308d1099292cddf3bcf1b34
91fc9735c426ef0fce29ebab86c6d1c7e4638b90
Exiting with code: 1