Console Output
+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load nvhpc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_multi_col_gpu_nvhpc_test_config
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test
Using /home/jenkins/workspace/clubb_BFB_multi_col_gpu_nvhpc_test with origin https://github.com/larson-group/clubb.git
Output Save Mode: all
Using branch: master
Making list from 'UnresolvedCommits':
CheckRange = True: Getting commit range
Run Output Path: output
Run commands: ['compile.py -gpu openacc', '\nrm -rf output', '\nmkdir output', '\nsed -i "s:lh_straight_mc.*:lh_straight_mc = true:g" input/tunable_parameters/configurable_model_flags.in', '\nsed -i "s:penta_solve_method.*:penta_solve_method = 2:g" input/tunable_parameters/configurable_model_flags.in', '\nsed -i "s:tridiag_solve_method.*:tridiag_solve_method = 2:g" input/tunable_parameters/configurable_model_flags.in', '\nrun_scripts/create_multi_col_params.py -n 4 -out_file run_scripts/clubb_params_multi_col.in', '\nrun_scripts/run_scm_all.bash -min_cases -params clubb_params_multi_col.in']
Diffing command: run_scripts/run_bindiff_all.py
=============================== Running Test ===============================
Parsing message from commit: 665f3896481654acdb49de9afae25d7a9b24a81c
Parsing message from commit: f3de007e9528afc6cc2d71090bce5c6c53337152
Parsing message from commit: 50a5528a55591d69e8b704dccebe1e7d6baa2669
Checking Commit: 665f3896481654acdb49de9afae25d7a9b24a81c
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: f3de007e9528afc6cc2d71090bce5c6c53337152
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 50a5528a55591d69e8b704dccebe1e7d6baa2669
Running: final commit to check, not labelled BIT_CHANGING
Checking out 50a5528a55591d69e8b704dccebe1e7d6baa2669
Running: 'compile.py -gpu openacc'
================== ERROR ==================
Commit: 50a5528a55591d69e8b704dccebe1e7d6baa2669
Unexpected error: [Errno 2] No such file or directory: 'compile.py'
There was a problem with a run command.
===========================================
System Exit detected. Calling test.cleanup()
=============================== Cleanup ===============================
Not removing any generated output.
Exiting with code: 1