+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop22-skylake_avx512/gcc-12.2.0/lmod-8.7.37-fq24mybyn2li6got2bxzk62ejh5d3p4z/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop22-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-wiuv7wc (required by: mpich/4.2.1, hdf5/1.14.3-nhc23hl,
netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3), glibc/2.35-tdr5czg (required by:
mpich/4.2.1, hdf5/1.14.3-nhc23hl, netcdf-c/4.9.2-xduzp77, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_gfortran_test_config
Directory 1 is 475e7687de4f2ba141334ba0046a2175b611eb75
Directory 2 is adfc58ffc5ad4d9bef00fc5e766b6d5a52079d8e
Using reporting threshold: 0.0
The following cases will be compared: ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']
================================================ arm_97 ================================================
>No differences detected by the linux diff in arm_97_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case arm_97.<<<
=====================================================================================================
================================================ arm ================================================
>No differences detected by the linux diff in arm_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case arm.<<<
=====================================================================================================
================================================ atex ================================================
>No differences detected by the linux diff in atex_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case atex.<<<
=====================================================================================================
================================================ bomex ================================================
>No differences detected by the linux diff in bomex_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case bomex.<<<
=====================================================================================================
================================================ dycoms2_rf01 ================================================
>No differences detected by the linux diff in dycoms2_rf01_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf01.<<<
=====================================================================================================
================================================ dycoms2_rf02_ds ================================================
>No differences detected by the linux diff in dycoms2_rf02_ds_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case dycoms2_rf02_ds.<<<
=====================================================================================================
================================================ gabls3_night ================================================
>No differences detected by the linux diff in gabls3_night_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case gabls3_night.<<<
=====================================================================================================
================================================ lba ================================================
>No differences detected by the linux diff in lba_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case lba.<<<
=====================================================================================================
================================================ rico ================================================
>No differences detected by the linux diff in rico_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case rico.<<<
=====================================================================================================
================================================ twp_ice ================================================
>No differences detected by the linux diff in twp_ice_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case twp_ice.<<<
=====================================================================================================
================================================ wangara ================================================
>No differences detected by the linux diff in wangara_stats.nc<
>>>The linux diff could not detect any differences in the file pairs for case wangara.<<<
=====================================================================================================
SUMMARY:
Linux diff did not detect any differences in the compared files.
Pass: 11 cases ['arm_97', 'arm', 'atex', 'bomex', 'dycoms2_rf01', 'dycoms2_rf02_ds', 'gabls3_night', 'lba', 'rico', 'twp_ice', 'wangara']
Fail: 0 cases []
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/workspace/clubb_BFB_gfortran_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_gfortran_test
Using /home/jenkins/workspace/clubb_BFB_gfortran_test with origin https://github.com/larson-group/clubb.git
Output Save Mode: none
Using branch: master
Making list from 'UnresolvedCommits':
CheckRange = True: Getting commit range
Run Output Path: output
Run commands: ['python compile.py -debug', '\nrm -rf output', '\nmkdir output', '\npython run_scripts/run_scm_all.py -min_cases']
Diffing command: run_scripts/run_bindiff_all.py
=============================== Running Test ===============================
Parsing message from commit: 4f6fb3897c84478095520db9d61b33b888711b3d
Parsing message from commit: 3f405544d0d3692a822e9f58ae679938d62c6de1
Parsing message from commit: 15adc8422c4d13004afb02c87d35a590361ead7e
Parsing message from commit: 475e7687de4f2ba141334ba0046a2175b611eb75
Checking Commit: 4f6fb3897c84478095520db9d61b33b888711b3d
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 3f405544d0d3692a822e9f58ae679938d62c6de1
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 15adc8422c4d13004afb02c87d35a590361ead7e
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 475e7687de4f2ba141334ba0046a2175b611eb75
Running: final commit to check, not labelled BIT_CHANGING
Checking out 475e7687de4f2ba141334ba0046a2175b611eb75
Running: 'python compile.py -debug'
Running: 'rm -rf output'
Running: 'mkdir output'
Running: 'python run_scripts/run_scm_all.py -min_cases'
Checking out adfc58ffc5ad4d9bef00fc5e766b6d5a52079d8e
Running: 'python compile.py -debug'
Running: 'rm -rf output'
Running: 'mkdir output'
Running: 'python run_scripts/run_scm_all.py -min_cases'
Diffing: 'run_scripts/run_bindiff_all.py 475e7687de4f2ba141334ba0046a2175b611eb75 adfc58ffc5ad4d9bef00fc5e766b6d5a52079d8e'
=============================== Test Results ===============================
Commit Range Checked = adfc58ffc5ad4d9bef00fc5e766b6d5a52079d8e...475e7687de4f2ba141334ba0046a2175b611eb75
No new Unresolved commits found.
No fake BIT_CHANGING commits found.
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Saving into BaselineCommit: 475e7687de4f2ba141334ba0046a2175b611eb75
=============================== Cleanup ===============================
Removing all generated output
REMOVING: adfc58ffc5ad4d9bef00fc5e766b6d5a52079d8e
REMOVING: 475e7687de4f2ba141334ba0046a2175b611eb75
================== Unresolved Commit Status ==================
No remaining Unresolved Commits.
Exiting with code: 0
