+ source /etc/profile.d/larson-group.sh
++ export GIT_EDITOR=vi
++ GIT_EDITOR=vi
++ export SVN_EDITOR=vi
++ SVN_EDITOR=vi
++ export OMP_STACKSIZE=1048579
++ OMP_STACKSIZE=1048579
++ export LMOD_ROOT=/opt/lmod/
++ LMOD_ROOT=/opt/lmod/
++ source /opt/lmod//lmod/lmod/init/bash
+++ '[' -z '' ']'
+++ case "$-" in
+++ __lmod_vx=x
+++ '[' -n x ']'
+++ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for this output (/usr/local/spack/opt/spack/linux-pop21-skylake_avx512/gcc-12.2.0/lmod-8.7.37-d6vyrvvncsuguygovgvimahv5kfyaunp/lmod/lmod/init/bash)
Shell debugging restarted
+++ unset __lmod_vx
+++ find /usr/local/spack/share/spack/lmod/linux-pop21-x86_64/Core -print -quit
++ export MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop21-x86_64/Core
++ MODULEPATH=/usr/local/spack/share/spack/lmod/linux-pop21-x86_64/Core
+ module load gcc netcdf-fortran
+ '[' -z '' ']'
+ case "$-" in
+ __lmod_sh_dbg=x
+ '[' -n x ']'
+ set +x
Shell debugging temporarily silenced: export LMOD_SH_DBG_ON=1 for Lmod's output
Lmod Warning:
-------------------------------------------------------------------------------
The following dependent module(s) are not currently loaded:
gcc-runtime/13.1.0-eheq3uy (required by: mpich/4.2.1, hdf5/1.14.3-2o6xqva,
netcdf-c/4.9.2, netcdf-fortran/4.5.3), glibc/2.33-3y65nib (required by:
mpich/4.2.1, hdf5/1.14.3-2o6xqva, netcdf-c/4.9.2, netcdf-fortran/4.5.3)
-------------------------------------------------------------------------------
Shell debugging restarted
+ unset __lmod_sh_dbg
+ return 0
+ python3 /home/pub/jenkins_BFB_test_configs/sys_admin/python_nightly_test_suite/run_test.py -c /home/pub/jenkins_BFB_test_configs/clubb_BFB_e3sm_flags_gfortran_test_config
=============================== Configuring Test ===============================
Working directory set to: /home/jenkins/workspace/clubb_BFB_e3sm_flags_gfortran_test
Checking specified repo: /home/jenkins/workspace/clubb_BFB_e3sm_flags_gfortran_test
Using /home/jenkins/workspace/clubb_BFB_e3sm_flags_gfortran_test with origin https://github.com/larson-group/clubb.git
Output Save Mode: none
Using branch: master
Making list from 'UnresolvedCommits':
CheckRange = True: Getting commit range
Run Output Path: output
Run commands: ['compile/compile.bash', '\nrm -rf output', '\nmkdir output', '\nmv input/tunable_parameters_e3sm/configurable_model_flags.in input/tunable_parameters', '\nrun_scripts/run_scm_all.bash --min-cases']
Diffing command: run_scripts/run_bindiff_all.py
=============================== Running Test ===============================
Parsing message from commit: 63d63ba7a3755fa87c6c9aeae24e60a9c2f1fe22
Parsing message from commit: f2ae5b70703e3a86d145983b4fea098cbb8925a3
Parsing message from commit: 75fd9262981e736aed8bc8995ec4f2c88bd03d12
Parsing message from commit: ec720a8fe4132c9af37967fd3060080097b13182
Checking Commit: 63d63ba7a3755fa87c6c9aeae24e60a9c2f1fe22
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: f2ae5b70703e3a86d145983b4fea098cbb8925a3
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: 75fd9262981e736aed8bc8995ec4f2c88bd03d12
Skipping: not final commit and not labelled BIT_CHANGING
Checking Commit: ec720a8fe4132c9af37967fd3060080097b13182
Running: final commit to check, not labelled BIT_CHANGING
=============================== Test Results ===============================
Commit Range Checked = ec720a8fe4132c9af37967fd3060080097b13182...ec720a8fe4132c9af37967fd3060080097b13182
No new Unresolved commits found.
No fake BIT_CHANGING commits found.
No remaining Unresolved Commits.
=============================== Updating Config File ===============================
Saving into UnresolvedCommits:
Ignoring ec720a8fe4132c9af37967fd3060080097b13182 since it failed to produce output.
Ignoring 75fd9262981e736aed8bc8995ec4f2c88bd03d12 since it failed to produce output.
Ignoring f2ae5b70703e3a86d145983b4fea098cbb8925a3 since it failed to produce output.
Ignoring 63d63ba7a3755fa87c6c9aeae24e60a9c2f1fe22 since it failed to produce output.
=============================== Cleanup ===============================
Removing all generated output
================== Unresolved Commit Status ==================
No remaining Unresolved Commits.
Exiting with code: 0