+ gzip -d /home/jenkins/cam_output/scratch/test_scam_atex/run/cesm.log.210902-033521.gz
+ cat /home/jenkins/cam_output/scratch/test_scam_atex/run/cesm.log.210902-033521
Invalid PIO rearranger comm max pend req (comp2io), 0
Resetting PIO rearranger comm max pend req (comp2io) to 64
PIO rearranger options:
comm type =p2p
comm fcd =2denable
max pend req (comp2io) = 0
enable_hs (comp2io) = T
enable_isend (comp2io) = F
max pend req (io2comp) = 64
enable_hs (io2comp) = F
enable_isend (io2comp) = T
(seq_comm_setcomm) init ID ( 1 GLOBAL ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_setcomm) init ID ( 2 CPL ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_setcomm) init ID ( 5 ATM ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 6 CPLATM ) join IDs = 2 5 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 3 ALLATMID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 4 CPLALLATMID ) join IDs = 2 3 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 9 LND ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 10 CPLLND ) join IDs = 2 9 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 7 ALLLNDID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 8 CPLALLLNDID ) join IDs = 2 7 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 13 ICE ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 14 CPLICE ) join IDs = 2 13 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 11 ALLICEID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 12 CPLALLICEID ) join IDs = 2 11 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 17 OCN ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 18 CPLOCN ) join IDs = 2 17 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 15 ALLOCNID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 16 CPLALLOCNID ) join IDs = 2 15 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 21 ROF ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 22 CPLROF ) join IDs = 2 21 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 19 ALLROFID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 20 CPLALLROFID ) join IDs = 2 19 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 25 GLC ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 26 CPLGLC ) join IDs = 2 25 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 23 ALLGLCID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 24 CPLALLGLCID ) join IDs = 2 23 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 29 WAV ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 30 CPLWAV ) join IDs = 2 29 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 27 ALLWAVID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 28 CPLALLWAVID ) join IDs = 2 27 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 33 ESP ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 34 CPLESP ) join IDs = 2 33 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 31 ALLESPID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 32 CPLALLESPID ) join IDs = 2 31 ( npes = 1) ( nthreads = 1)
(seq_comm_setcomm) init ID ( 37 IAC ) pelist = 0 0 1 ( npes = 1) ( nthreads = 1)( suffix =)
(seq_comm_joincomm) init ID ( 38 CPLIAC ) join IDs = 2 37 ( npes = 1) ( nthreads = 1)
(seq_comm_jcommarr) init ID ( 35 ALLIACID ) join multiple comp IDs ( npes = 1) ( nthreads = 1)
(seq_comm_joincomm) init ID ( 36 CPLALLIACID ) join IDs = 2 35 ( npes = 1) ( nthreads = 1)
(seq_comm_printcomms) 1 0 1 1 GLOBAL:
(seq_comm_printcomms) 2 0 1 1 CPL:
(seq_comm_printcomms) 3 0 1 1 ALLATMID:
(seq_comm_printcomms) 4 0 1 1 CPLALLATMID:
(seq_comm_printcomms) 5 0 1 1 ATM:
(seq_comm_printcomms) 6 0 1 1 CPLATM:
(seq_comm_printcomms) 7 0 1 1 ALLLNDID:
(seq_comm_printcomms) 8 0 1 1 CPLALLLNDID:
(seq_comm_printcomms) 9 0 1 1 LND:
(seq_comm_printcomms) 10 0 1 1 CPLLND:
(seq_comm_printcomms) 11 0 1 1 ALLICEID:
(seq_comm_printcomms) 12 0 1 1 CPLALLICEID:
(seq_comm_printcomms) 13 0 1 1 ICE:
(seq_comm_printcomms) 14 0 1 1 CPLICE:
(seq_comm_printcomms) 15 0 1 1 ALLOCNID:
(seq_comm_printcomms) 16 0 1 1 CPLALLOCNID:
(seq_comm_printcomms) 17 0 1 1 OCN:
(seq_comm_printcomms) 18 0 1 1 CPLOCN:
(seq_comm_printcomms) 19 0 1 1 ALLROFID:
(seq_comm_printcomms) 20 0 1 1 CPLALLROFID:
(seq_comm_printcomms) 21 0 1 1 ROF:
(seq_comm_printcomms) 22 0 1 1 CPLROF:
(seq_comm_printcomms) 23 0 1 1 ALLGLCID:
(seq_comm_printcomms) 24 0 1 1 CPLALLGLCID:
(seq_comm_printcomms) 25 0 1 1 GLC:
(seq_comm_printcomms) 26 0 1 1 CPLGLC:
(seq_comm_printcomms) 27 0 1 1 ALLWAVID:
(seq_comm_printcomms) 28 0 1 1 CPLALLWAVID:
(seq_comm_printcomms) 29 0 1 1 WAV:
(seq_comm_printcomms) 30 0 1 1 CPLWAV:
(seq_comm_printcomms) 31 0 1 1 ALLESPID:
(seq_comm_printcomms) 32 0 1 1 CPLALLESPID:
(seq_comm_printcomms) 33 0 1 1 ESP:
(seq_comm_printcomms) 34 0 1 1 CPLESP:
(seq_comm_printcomms) 35 0 1 1 ALLIACID:
(seq_comm_printcomms) 36 0 1 1 CPLALLIACID:
(seq_comm_printcomms) 37 0 1 1 IAC:
(seq_comm_printcomms) 38 0 1 1 CPLIAC:
(t_initf) Read in prof_inparm namelist from: drv_in
(t_initf) Using profile_disable= F
(t_initf) profile_timer= 1
(t_initf) profile_depth_limit= 4
(t_initf) profile_detail_limit= 2
(t_initf) profile_barrier= F
(t_initf) profile_outpe_num= 1
(t_initf) profile_outpe_stride= 0
(t_initf) profile_single_file= F
(t_initf) profile_global_stats= T
(t_initf) profile_ovhd_measurement= F
(t_initf) profile_add_detail= F
(t_initf) profile_papi_enable= F
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l, cnst_name(l), cnst_name_cw(l)
1 Q
2 CLDLIQ
3 CLDICE
4 NUMLIQ
5 NUMICE
6 RAINQM
7 SNOWQM
8 NUMRAI
9 NUMSNO
10 H2O2
11 H2SO4
12 SO2
13 DMS
14 SOAG
15 so4_a1 so4_c1
16 pom_a1 pom_c1
17 soa_a1 soa_c1
18 bc_a1 bc_c1
19 dst_a1 dst_c1
20 ncl_a1 ncl_c1
21 num_a1 num_c1
22 so4_a2 so4_c2
23 soa_a2 soa_c2
24 ncl_a2 ncl_c2
25 num_a2 num_c2
26 dst_a3 dst_c3
27 ncl_a3 ncl_c3
28 so4_a3 so4_c3
29 num_a3 num_c3
calcsize addfld - num_a1_sfcsiz1
calcsize addfld - num_a1_sfcsiz2
calcsize addfld - num_c1_sfcsiz1
calcsize addfld - num_c1_sfcsiz2
calcsize addfld - num_a2_sfcsiz1
calcsize addfld - num_a2_sfcsiz2
calcsize addfld - num_c2_sfcsiz1
calcsize addfld - num_c2_sfcsiz2
calcsize addfld - num_a3_sfcsiz1
calcsize addfld - num_a3_sfcsiz2
calcsize addfld - num_c3_sfcsiz1
calcsize addfld - num_c3_sfcsiz2
calcsize addfld - num_a2_sfcsiz3
calcsize addfld - num_a1_sfcsiz3
calcsize addfld - num_a2_sfcsiz4
calcsize addfld - num_a1_sfcsiz4
calcsize addfld - num_c2_sfcsiz3
calcsize addfld - num_c1_sfcsiz3
calcsize addfld - num_c2_sfcsiz4
calcsize addfld - num_c1_sfcsiz4
calcsize addfld - so4_a2_sfcsiz3
calcsize addfld - so4_a1_sfcsiz3
calcsize addfld - so4_a2_sfcsiz4
calcsize addfld - so4_a1_sfcsiz4
calcsize addfld - so4_c2_sfcsiz3
calcsize addfld - so4_c1_sfcsiz3
calcsize addfld - so4_c2_sfcsiz4
calcsize addfld - so4_c1_sfcsiz4
calcsize addfld - soa_a2_sfcsiz3
calcsize addfld - soa_a1_sfcsiz3
calcsize addfld - soa_a2_sfcsiz4
calcsize addfld - soa_a1_sfcsiz4
calcsize addfld - soa_c2_sfcsiz3
calcsize addfld - soa_c1_sfcsiz3
calcsize addfld - soa_c2_sfcsiz4
calcsize addfld - soa_c1_sfcsiz4
calcsize addfld - ncl_a2_sfcsiz3
calcsize addfld - ncl_a1_sfcsiz3
calcsize addfld - ncl_a2_sfcsiz4
calcsize addfld - ncl_a1_sfcsiz4
calcsize addfld - ncl_c2_sfcsiz3
calcsize addfld - ncl_c1_sfcsiz3
calcsize addfld - ncl_c2_sfcsiz4
calcsize addfld - ncl_c1_sfcsiz4
qconff addfld qconff_gaex kg/kg/s
qevapff addfld qevapff_gaex kg/kg/s
qconbb addfld qconbb_gaex kg/kg/s
qevapbb addfld qevapbb_gaex kg/kg/s
qconbg addfld qconbg_gaex kg/kg/s
qevapbg addfld qevapbg_gaex kg/kg/s
qcon addfld qcon_gaex kg/kg/s
qevap addfld qevap_gaex kg/kg/s
gasaerexch addfld H2SO4_sfgaex1 kg/m2/s
gasaerexch addfld SOAG_sfgaex1 kg/m2/s
gasaerexch addfld so4_a1_sfgaex1 kg/m2/s
gasaerexch addfld soa_a1_sfgaex1 kg/m2/s
gasaerexch addfld so4_a2_sfgaex1 kg/m2/s
gasaerexch addfld soa_a2_sfgaex1 kg/m2/s
gasaerexch addfld so4_a3_sfgaex1 kg/m2/s
gasaerexch addfld so4_a1_sfgaex2 kg/m2/s
gasaerexch addfld so4_c1_sfgaex2 kg/m2/s
gasaerexch addfld soa_a1_sfgaex2 kg/m2/s
gasaerexch addfld soa_c1_sfgaex2 kg/m2/s
gasaerexch addfld ncl_a1_sfgaex2 kg/m2/s
gasaerexch addfld ncl_c1_sfgaex2 kg/m2/s
gasaerexch addfld num_a1_sfgaex2 #/m2/s
gasaerexch addfld num_c1_sfgaex2 #/m2/s
gasaerexch addfld so4_a2_sfgaex2 kg/m2/s
gasaerexch addfld so4_c2_sfgaex2 kg/m2/s
gasaerexch addfld soa_a2_sfgaex2 kg/m2/s
gasaerexch addfld soa_c2_sfgaex2 kg/m2/s
gasaerexch addfld ncl_a2_sfgaex2 kg/m2/s
gasaerexch addfld ncl_c2_sfgaex2 kg/m2/s
gasaerexch addfld num_a2_sfgaex2 #/m2/s
gasaerexch addfld num_c2_sfgaex2 #/m2/s
subr. modal_aero_coag_init
pair 1 mode 2 ---> mode 1 eff 1
spec 22=so4_a2 ---> spec 15=so4_a1
spec 23=soa_a2 ---> spec 17=soa_a1
spec 24=ncl_a2 ---> spec 20=ncl_a1
modal_aero_coag_init addfld so4_a1_sfcoag1 kg/m2/s
modal_aero_coag_init addfld soa_a1_sfcoag1 kg/m2/s
modal_aero_coag_init addfld ncl_a1_sfcoag1 kg/m2/s
modal_aero_coag_init addfld num_a1_sfcoag1 #/m2/s
modal_aero_coag_init addfld so4_a2_sfcoag1 kg/m2/s
modal_aero_coag_init addfld soa_a2_sfcoag1 kg/m2/s
modal_aero_coag_init addfld ncl_a2_sfcoag1 kg/m2/s
modal_aero_coag_init addfld num_a2_sfcoag1 #/m2/s
modal_aero_newnuc_init addfld H2SO4_sfnnuc1 kg/m2/s
modal_aero_newnuc_init addfld so4_a2_sfnnuc1 kg/m2/s
modal_aero_newnuc_init addfld num_a2_sfnnuc1 #/m2/s
NetCDF: Invalid dimension ID or name
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NetCDF: Invalid dimension ID or name
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NetCDF: Invalid dimension ID or name
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NetCDF: Invalid dimension ID or name
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NetCDF: Invalid dimension ID or name
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NetCDF: Invalid dimension ID or name
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C1 = 1.0000000000000000
C1b = 1.0000000000000000
C1c = 1.0000000000000000
C2rt = 1.0000000000000000
C2thl = 1.0000000000000000
C2rtthl = 1.3000000000000000
C4 = 5.2000000000000002
C_uu_shr = 0.40000000000000002
C_uu_buoy = 0.29999999999999999
C6rt = 2.0000000000000000
C6rtb = 2.0000000000000000
C6rtc = 1.0000000000000000
C6thl = 2.0000000000000000
C6thlb = 2.0000000000000000
C6thlc = 1.0000000000000000
C7 = 0.50000000000000000
C7b = 0.50000000000000000
C7c = 0.50000000000000000
C8 = 4.2000000000000002
C8b = 0.0000000000000000
C10 = 3.2999999999999998
C11 = 0.69999999999999996
C11b = 0.34999999999999998
C11c = 0.50000000000000000
C12 = 1.0000000000000000
C13 = 0.10000000000000001
C14 = 1.0000000000000000
C_wp2_pr_dfsn = 0.0000000000000000
C_wp3_pr_tp = 0.0000000000000000
C_wp3_pr_turb = 0.0000000000000000
C_wp3_pr_dfsn = 0.0000000000000000
C_wp2_splat = 0.0000000000000000
C6rt_Lscale0 = 14.000000000000000
C6thl_Lscale0 = 14.000000000000000
C7_Lscale0 = 0.84999999999999998
wpxp_L_thresh = 60.000000000000000
c_K = 0.20000000000000001
c_K1 = 0.20000000000000001
nu1 = 20.000000000000000
c_K2 = 2.5000000000000001E-002
nu2 = 1.0000000000000000
c_K6 = 0.37500000000000000
nu6 = 5.0000000000000000
c_K8 = 5.0000000000000000
nu8 = 20.000000000000000
c_K9 = 0.25000000000000000
nu9 = 20.000000000000000
nu10 = 0.0000000000000000
c_K_hm = 0.75000000000000000
c_K_hmb = 0.75000000000000000
K_hm_min_coef = 0.10000000000000001
nu_hm = 1.5000000000000000
slope_coef_spread_DG_means_w = 21.000000000000000
pdf_component_stdev_factor_w = 1.0000000000000000
coef_spread_DG_means_rt = 0.80000000000000004
coef_spread_DG_means_thl = 0.80000000000000004
gamma_coef = 0.30800000000000000
gamma_coefb = 0.32000000000000001
gamma_coefc = 5.0000000000000000
mu = 1.0000000000000000E-003
beta = 2.3999999999999999
lmin_coef = 0.10000000000000001
omicron = 0.50000000000000000
zeta_vrnce_rat = 0.0000000000000000
upsilon_precip_frac_rat = 0.55000000000000004
lambda0_stability_coef = 4.0000000000000001E-002
mult_coef = 1.0000000000000000
taumin = 90.000000000000000
taumax = 3600.0000000000000
Lscale_mu_coef = 2.0000000000000000
Lscale_pert_coef = 0.10000000000000001
alpha_corr = 0.14999999999999999
Skw_denom_coef = 0.0000000000000000
c_K10 = 0.50000000000000000
c_K10h = 0.29999999999999999
thlp2_rad_coef = 1.0000000000000000
thlp2_rad_cloud_frac_thresh = 0.10000000000000001
up2_sfc_coef = 2.0000000000000000
Skw_max_mag = 4.5000000000000000
C_invrs_tau_bkgnd = 1.1000000000000001
C_invrs_tau_sfc = 0.10000000000000001
C_invrs_tau_shear = 2.0000000000000000E-002
C_invrs_tau_N2 = 0.40000000000000002
C_invrs_tau_N2_wp2 = 0.10000000000000001
C_invrs_tau_N2_xp2 = 5.0000000000000003E-002
C_invrs_tau_N2_wpxp = 0.0000000000000000
C_invrs_tau_N2_clear_wp3 = 1.0000000000000000
C_invrs_tau_wpxp_Ri = 0.34999999999999998
C_invrs_tau_wpxp_N2_thresh = 3.3000000000000000E-004
xp3_coef_base = 0.25000000000000000
xp3_coef_slope = 1.0000000000000000E-002
altitude_threshold = 100.00000000000000
rtp2_clip_coef = 0.50000000000000000
Cx_min = 0.33333333333333331
Cx_max = 0.94999999999999996
Richardson_num_min = 0.25000000000000000
Richardson_num_max = 400.00000000000000
1 pes participating in computation for CLM
-----------------------------------
NODE# NAME
( 0) nelson.math.uwm.edu
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calcsize j,iq,jac, lsfrm,lstoo 1 1 1 25 21
calcsize j,iq,jac, lsfrm,lstoo 1 1 2 25 21
calcsize j,iq,jac, lsfrm,lstoo 1 2 1 22 15
calcsize j,iq,jac, lsfrm,lstoo 1 2 2 22 15
calcsize j,iq,jac, lsfrm,lstoo 1 3 1 23 17
calcsize j,iq,jac, lsfrm,lstoo 1 3 2 23 17
calcsize j,iq,jac, lsfrm,lstoo 1 4 1 24 20
calcsize j,iq,jac, lsfrm,lstoo 1 4 2 24 20
calcsize j,iq,jac, lsfrm,lstoo 2 1 1 21 25
calcsize j,iq,jac, lsfrm,lstoo 2 1 2 21 25
calcsize j,iq,jac, lsfrm,lstoo 2 2 1 15 22
calcsize j,iq,jac, lsfrm,lstoo 2 2 2 15 22
calcsize j,iq,jac, lsfrm,lstoo 2 3 1 17 23
calcsize j,iq,jac, lsfrm,lstoo 2 3 2 17 23
calcsize j,iq,jac, lsfrm,lstoo 2 4 1 20 24
calcsize j,iq,jac, lsfrm,lstoo 2 4 2 20 24
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(docn_comp_final) -------------------------------------------------------------------------
(docn_comp_final) ocn: end of main integration loop
(docn_comp_final) -------------------------------------------------------------------------
NetCDF: Variable not found
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WARNING: Rearr optional argument is a pio2 feature, ignored in pio1
WARNING: Rearr optional argument is a pio2 feature, ignored in pio1
WARNING: Rearr optional argument is a pio2 feature, ignored in pio1
WARNING: Rearr optional argument is a pio2 feature, ignored in pio1
WARNING: Rearr optional argument is a pio2 feature, ignored in pio1
NetCDF: Invalid dimension ID or name
NetCDF: Variable not found
NetCDF: Variable not found
NetCDF: Invalid dimension ID or name
NetCDF: Variable not found
NetCDF: Variable not found
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NetCDF: Variable not found
NetCDF: Variable not found
NetCDF: Variable not found
NetCDF: Invalid dimension ID or name
NetCDF: Invalid dimension ID or name
NetCDF: Invalid dimension ID or name
NetCDF: Invalid dimension ID or name
NetCDF: Variable not found
NetCDF: Variable not found
NetCDF: Variable not found
NetCDF: Variable not found
NetCDF: Invalid dimension ID or name
NetCDF: Variable not found
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max rss=202.3 MB
max rss=202.5 MB
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